Commit Graph

17756 Commits

Author SHA1 Message Date
AMD Toolchain Support
541ccd6669
What's new in AOCL 3.1 (#27988)
* What's new in AOCL 3.1

1) AMD BLIS:
    1.a) Supports Dynamic Dispatch and AOCL Dynamic feature
    1.b) Improvements in DGEMM, ZGEMM, DTRSM, DSYRK, xGEMV, and DOTV
2) AMD libFLAME:
    2.a) Supports LAPACK 3.10.0 specification
    2.b) Optimized factorization and ZGEEV routines
3) AMD FFTW:
    3.a) Features like 'AMD application optimization layer', 'Fast MPI transpose algorithm' and 'Top N planner' are added
4) AMD LibM:
    4.a) Optimized exp2, log2 (Single and Double precision) scalar and vector
    4.b) Optimized log10f (scalar and vector) and powf vector variants to support WRF4.1.2 benchmark
5) AOCL-Sparse:
    5.a) New API for sparse matrix and dense matrix multiplication
6) AMD ScaLAPACK:
    6.a) ILP64 support has been enabled
7) AOCL enabled MUMPS library:
    7.a) CMake based build system on Windows for AOCL enabled MUMPS sparse solver library will be available shortly on GitHub
        7.a.i)	Refer https://github.com/amd/mumps-build
    7.b) Spack-based recipe on Linux for AOCL enabled MUMPS sparse solver library will be enabled shortly

* Fix invalid version range error

* Incorporated review comments

1) Restore to previous url value
2) Instead of if else statements, used spack's enable_or_disable feature

* Incorporated following review comments:

1. Use of satisfies() for spec checks
2. Seperate conflict statements to check for minimum and maximum GCC versions
3. Used CMakePackage helpers
4. Code rearrangement to have the directives listed before methods
2021-12-17 09:28:41 -08:00
Valentin Volkl
140e8085dd
sherpa: add new package (#27592)
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2021-12-17 18:16:58 +01:00
AMD Toolchain Support
2597fff76b
FFTW3 library inclusion (#27936)
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-17 18:11:59 +01:00
iarspider
225595235c
New package: py-xrootdpyfs (#28058)
* New package: py-xrootdpyfs

* Add old version of py-fs

* Replace 2to3.patch with running 2to3

* Just restriuct setuptools version

* Update var/spack/repos/builtin/packages/py-fs/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-17 10:11:20 -07:00
Max Zeyen
ee2974869c
gpi-2: add version 1.3.3 (#27881) 2021-12-17 17:57:48 +01:00
Adeeb Arif Kor
c940e9fc7e
dolfinx: add ADIOS2 variant (#27540) 2021-12-17 17:55:30 +01:00
Tom Payerle
c3a929fdfc
suite-sparse: fix issues with tbb (#28054)
* suite-sparse: Fix check for +/- tbb variant

Changed
'tbb' in spec
to
'+tbb' in spec

The former would configure suite-sparse to use tbb if any dependency
package (e.g. intel-oneapi-mkl) depends on tbb, even if
suite-sparse~tbb was specified.

* suite-sparse: conflict when trying to use 2021.x versions of tbb

See https://github.com/DrTimothyAldenDavis/SuiteSparse/issues/72

suite-sparse depends on task_schedule_init to control the number
of threads when e.g. interfacing with MATLAB.  However, Intel
dropped task_schedule_init in the 2021.x releases of TBB (it has
been deprecated since TBB 4.3.5).

We just raise a spack conflict when using tbb @2021.x and +tbb

Because tbb is a virtual package and is not versioned, I have
instead checked for either intel-oneapi-tbb@2021: or
intel-tbb@2021:, not the most elegant but should do the job

* suite-sparse: fix style issues
2021-12-17 09:32:59 -07:00
Manuela Kuhn
6313d84d38
r-viridislite: add 0.4.0 (#27872) 2021-12-17 17:19:42 +01:00
snehring
10ccbc9a2c
bridger: fixing issues with newer compilers (#28008) 2021-12-17 17:14:44 +01:00
Drew Whitehouse
bbe69aa725
libcxxwrap-julia: fix the git branch name master -> main (#28033) 2021-12-17 17:03:03 +01:00
Adam J. Stewart
8b3858081d
py-mypy: add v0.920 (#28034) 2021-12-17 17:02:06 +01:00
Adam J. Stewart
809d0523d9
Add py-pytorch v1.10.1 and py-pytorchvision v0.11.2 (#28055) 2021-12-17 16:14:54 +01:00
haralmha
e1f6a2e6b5
Specify dependencies to py-setuptools@:57.99 for packages using 2to3 (#27777) 2021-12-17 08:08:01 -06:00
Wouter Deconinck
956bb91cfe
[autodiff] new package for optional dependency of acts (#28028) 2021-12-17 14:22:46 +01:00
Wouter Deconinck
23cb7d761e
[vecmem] new package for optional dependency of acts (#28029) 2021-12-17 14:21:51 +01:00
Wouter Deconinck
1813a809ff
[acts] depends_on dd4hep +dddetectors (+ddg4 when +geant4) (#27861) 2021-12-17 14:17:52 +01:00
ravil-mobile
e3f0be41d4
Updated dpcpp package (#27953)
* Added installation of OpenMP as an option
* Added a softlink (dpcpp) to clang++ to
mimic the packaged version of dpcpp

Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
2021-12-17 14:16:13 +01:00
iarspider
618fd04729
py-vector: add new package (#28057) 2021-12-17 14:14:38 +01:00
Harmen Stoppels
04bed42831
libtree: add v3.0.1 (#28040) 2021-12-17 10:34:24 +01:00
AMD Toolchain Support
f754ed9788
Additional flags for ROMS (#27951)
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-16 19:47:20 -08:00
iarspider
6443086222
CMake: fix rhash detection (#27944)
* RHash: update version; create symlink librash.so

* Install headers

* Flake-8

* Update package.py

* Update package.py

* Update package.py (#19)

* Update package.py

* Update package.py

* Update var/spack/repos/builtin/packages/rhash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fix installation on macOS

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16 18:02:26 -07:00
Larry Knox
556565ca0d
hdf5: add version 1.10.8 (#27613)
* Update hdf5/package.py to add HDF5 1.10.8 release and move
  preferred version from 1.10.7 to 1.10.8.
* silo: versions before 4.11 conflict with hdf5 >= 1.10.8.
* Add patch file for silo@4.11 with hdf5 1.10 >=1.10.8 and
  hdf5 1.12 >= 1.12.1.
2021-12-16 16:51:02 -08:00
Satish Balay
40886599ce
petsc: enable +rocm+kokkos (#27779)
Also fix kokkos-kernels when kokkos is built with +rocm
2021-12-16 14:47:31 -08:00
eugeneswalker
2310da0070
rocprofiler-dev package: needs numactl as link dep for tests (#27839) 2021-12-16 14:17:05 -08:00
Jen Herting
e76de4138e
New package: py-pynisher (#28052)
* [py-pynisher] created template

* [py-pynisher]

- Added homepage
- Added description
- Removed fixmes
- added dependencies
2021-12-16 14:21:45 -06:00
Howard Pritchard
43aeb4e48e
OpenMPI Package: add variant for romio (#27897)
Add option to disable the internal romio build.
2021-12-16 10:49:28 -08:00
iarspider
305f1d68d6
New package: py-scinum (#28041)
* New package: py-scinum

* Update var/spack/repos/builtin/packages/py-scinum/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16 11:29:14 -07:00
Tracy-Pantleo
1b273ed5c9
wonton package: fix reference error (#27963) 2021-12-16 09:55:37 -08:00
iarspider
bb1d0d1900
New package: py-schema (#28039) 2021-12-16 11:54:59 -06:00
iarspider
f262693983
New package: py-shellingham (#28043) 2021-12-16 11:43:52 -06:00
iarspider
8c81469f94
New version: py-correctionlib 2.1.0 (#28051) 2021-12-16 10:36:57 -07:00
vijay kallesh
6c250640c4
aocc: add v3.2.0 (#27946)
Co-authored-by: amd-toolchain-support <toolchainsupport@amd.com>
2021-12-16 14:37:59 +01:00
snehring
89044ff5d5
delly2: updating to v0.9.1 (#28000) 2021-12-16 06:47:11 +01:00
Thomas Green
315f01fc96
meep: fixed dependencies (#27574)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-12-16 06:44:26 +01:00
snehring
e99aff93e1
samtools: fixing build issue due to change in 1.14 (#28024) 2021-12-16 06:34:22 +01:00
AMD Toolchain Support
42677ded8e
Fix for OpenFOAM pthread issue for AOCC 3.2 (#27949)
* Fix for OpenFOAM pthread issue for AOCC 3.2

* addressing the review comments

* updating when command for aocc v3.2.0 and above

Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-15 21:45:17 -06:00
Dennis R Kennetz
d375a7ea0a
pcre package: update download URL (#27867)
* ftp url is dead as stated in the home page. The sha256 is the same in the sourceforge dl.
* added myself as a maintainer per spackbot's rec
2021-12-15 18:58:13 -08:00
Jen Herting
3b4c622661
New package: py-copulas (#27920)
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-15 18:56:13 -08:00
Erik Schnetter
ba87593afd
mpitrampoline package: add versions up to 2.8.0 (#27928) 2021-12-15 18:53:03 -08:00
Adam J. Stewart
af1ec6275d
py-matplotlib: add v3.5.1 (#27929) 2021-12-15 18:52:21 -08:00
Adam J. Stewart
3ff2fb43cf
py-pandas: add v1.3.5 (#27930) 2021-12-15 18:52:02 -08:00
Wouter Deconinck
a148e37c4c
assimp package: add version 5.1.3 (#27934) 2021-12-15 18:51:01 -08:00
Thomas Gruber
4d876bac0c
likwid package: add version 5.2.1 (#27935) 2021-12-15 18:49:19 -08:00
Asher Mancinelli
114b35144e
ExaGO package: add version 1.2.0; update dependency constraints (#27961)
* PETSc is a core dependency, yet we left a variant for PETSc.
  This was removed, and ExaGO always depends on PETSc. The CMake
  arguments were updated accordingly.
* camp+cuda is only a dependency when we build with RAJA and CUDA.
2021-12-15 18:23:36 -08:00
snehring
69184dc390
opa-psm2 package: add version 11.2.206 (#27968) 2021-12-15 18:13:22 -08:00
Mikhail Titov
70aea4cd82
RADICAL-Cybertools packages: add versions (#28002)
* py-radical-entk: add version 1.9.0
* py-radical-pilot: add version 1.10.1
* py-radical-utils: add version 1.9.1
* py-radical-utils: requires py-pymongo less than version 4
2021-12-15 17:53:05 -08:00
Adam J. Stewart
e091eacde0
New package: py-trojanzoo-sphinx-theme (#27972) 2021-12-15 17:48:43 -08:00
Adam J. Stewart
9447ec9600
py-sphinx package: add version 4.3.1 (#27933) 2021-12-15 16:22:22 -08:00
iarspider
351a1d8d37
New package: py-pysqlite3 (#28020)
* New package: py-pysqlite3

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-15 14:35:07 -07:00
iarspider
b0f996c8ef
New package: py-prwlock (#28017) 2021-12-15 12:00:28 -06:00