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Author SHA1 Message Date
Glenn Johnson
541db88af4 add version 1.72.0 to bioconductor package r-affycoretools 2023-04-27 16:34:43 -05:00
Glenn Johnson
a23f8ef826 add version 1.58.0 to bioconductor package r-affycontam 2023-04-27 16:34:40 -05:00
Glenn Johnson
8a46a52de7 add version 1.76.0 to bioconductor package r-affycomp 2023-04-27 16:34:36 -05:00
Glenn Johnson
5714d6eadf add version 1.78.0 to bioconductor package r-affy 2023-04-27 16:34:33 -05:00
Glenn Johnson
34d007c1a5 add version 1.72.0 to bioconductor package r-affxparser 2023-04-27 16:34:31 -05:00
Glenn Johnson
68583b9a21 add version 1.70.0 to bioconductor package r-adsplit 2023-04-27 16:34:28 -05:00
Glenn Johnson
c40c4640bd add version 2.56.0 to bioconductor package r-acme 2023-04-27 16:34:25 -05:00
Glenn Johnson
bec83493b6 add version 1.78.0 to bioconductor package r-acgh 2023-04-27 16:34:23 -05:00
Glenn Johnson
bb48215ec0 add version 1.30.0 to bioconductor package r-acde 2023-04-27 16:34:20 -05:00
Glenn Johnson
73738ecac0 add version 1.54.0 to bioconductor package r-absseq 2023-04-27 16:34:17 -05:00
Glenn Johnson
8aa577996e add version 1.48.0 to bioconductor package r-a4reporting 2023-04-27 16:34:12 -05:00
Glenn Johnson
f953aad6f3 add version 1.48.0 to bioconductor package r-a4preproc 2023-04-27 16:34:09 -05:00
Glenn Johnson
531309a611 add version 1.48.0 to bioconductor package r-a4core 2023-04-27 16:34:07 -05:00
Glenn Johnson
f98872fb6b add version 1.48.0 to bioconductor package r-a4classif 2023-04-27 16:34:04 -05:00
Glenn Johnson
d66b0f4c2d add version 1.48.0 to bioconductor package r-a4base 2023-04-27 16:34:02 -05:00
Glenn Johnson
c9e3e8ea47 add version 1.48.0 to bioconductor package r-a4 2023-04-27 16:33:59 -05:00
Massimiliano Culpo
cd851e173d gcc: add v13.1.0 (#37230) 
version 13.1 builds with apple-clang@14.0.3
 2023-04-27 16:41:44 +02:00
Harmen Stoppels
8be2f017e7 gcc: no need to special case macos/linux wrt rpaths (#37243) 2023-04-27 15:52:28 +02:00
Michael Kuhn
f6464abfcb Fix pkgconfig dependencies (#37236) 
Packages shouldn't typically depend on pkg-config or pkgconf but on the
virtual provider pkgconfig.
 2023-04-27 10:04:22 +02:00
Alec Scott
ce81f15e6f r-covr: add v3.6.2 (#37194) 2023-04-27 02:22:29 -04:00
Wouter Deconinck
4d597bdecc py-gssapi: depends_on krb5 (#37227) 
This dependency was somehow overlooked (but is pretty crucial) because it doesn't appear in the python requirements...
 2023-04-26 22:35:15 -04:00
Manuela Kuhn
62ea6bed89 py-bidscoin: add 4.0.0 and py-pydeface as new deb package (#37231) 2023-04-26 20:58:57 -04:00
Manuela Kuhn
742fbd458d py-mypy: add 1.2.0 (#37224) 2023-04-26 20:54:11 -04:00
Manuela Kuhn
10b6651d35 py-flake8: add 6.0.0 and update dependencies (#37222) 2023-04-26 20:53:49 -04:00
Alec Scott
3f3fc804c6 r-afex: add v1.2-1 (#37188) 2023-04-26 19:36:53 -05:00
Alec Scott
c7d586d03a r-argparse: add v2.2.2 (#37189) 2023-04-26 19:36:11 -05:00
Alec Scott
b17feb9b06 r-bit: add v4.0.5 (#37190) 2023-04-26 19:35:30 -05:00
Alec Scott
2e4a9f1abf r-loo: add v2.6.0 (#37205) 
* r-loo: add v2.6.0

* Split r dependency from other deps to align with common r package style
 2023-04-26 19:34:19 -05:00
Alec Scott
117d374a61 r-bookdown: add v0.33 (#37191) 
* r-bookdown: add v0.33

* Add r@3.5.0: dependency to package
 2023-04-26 19:33:18 -05:00
Alec Scott
67cf37d750 r-compositions: add v2.0-6 (#37192) 
* r-compositions: add v2.0-6

* Split r dependecies from other r packages to match common format
 2023-04-26 19:32:15 -05:00
Alec Scott
6e276ecb4c r-convevol: add v2.0.0 (#37193) 2023-04-26 19:31:34 -05:00
Alec Scott
8c6a3f15e5 r-desolve: add v1.35 (#37195) 2023-04-26 19:29:14 -05:00
Alec Scott
65bbd2a1e6 r-fastmap: add v1.1.1 (#37196) 2023-04-26 19:27:49 -05:00
Alec Scott
426f8e987b r-formatr: add v1.14 (#37197) 2023-04-26 19:27:11 -05:00
Alec Scott
a78e061117 r-ggvis: add v0.4.8 (#37198) 2023-04-26 19:26:24 -05:00
Alec Scott
17e14757e2 r-glmnet: add v4.1-7 (#37199) 
* r-glmnet: add v4.1-7

* Split r dependency from other deps to follow common format
 2023-04-26 19:25:42 -05:00
Alec Scott
2bb3553f24 r-insight: add v0.19.1 (#37200) 2023-04-26 19:24:55 -05:00
Alec Scott
6267a1f68d r-interp: add v1.1-4 (#37201) 
* r-interp: add v1.1-4

* split r dep from other dependencies to match common format
 2023-04-26 19:24:08 -05:00
Alec Scott
666ceb998c r-jomo: add v2.7-6 (#37202) 2023-04-26 19:23:09 -05:00
Alec Scott
e4cc4018c1 r-lattice: add v0.21-8 (#37204) 
* r-lattice: add v0.21-8

* Enforce a higher version of R as according to cran
 2023-04-26 19:12:26 -05:00
Alec Scott
5551b7a506 r-magic: add v1.6-1 (#37206) 2023-04-26 19:06:27 -05:00
Alec Scott
facc93a30e r-maptools: add v1.1-6 (#37207) 2023-04-26 19:05:29 -05:00
Alec Scott
b3101d1c85 r-meta: add v6.2-1 (#37208) 2023-04-26 19:04:07 -05:00
H. Joe Lee
0d7890baa5 spdk: add a new package (#35520) 
* spdk: add a new package
* chore: fix formatting and style
* fix: add rdma-core dependency
* fix: remove spdk < 23.01 versions per @soumagne review
* spdk: add 22.01.1 version
* spdk: address @soumagne reviews
* spdk: fix fio audit failure
* spdk: fix fio version and remove debugging info
 2023-04-26 16:38:14 -07:00
Wouter Deconinck
d43ae9fa10 scitokens-cpp: depends_on pkgconfig (#37168) 
A missing dependency, showing up as:
```console
#24 1113.1 3 errors found in build log:
#24 1113.1      20    -- Check for working CXX compiler: /opt/spack/lib/spack/env/gcc/g++ 
#24 1113.1            - skipped
#24 1113.1      21    -- Detecting CXX compile features
#24 1113.1      22    -- Detecting CXX compile features - done
#24 1113.1      23    -- Found CURL: /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/curl-
#24 1113.1            7.85.0-ca5zznsdkp2hwbnikha6sgqzcpuw74sc/lib/libcurl.so (found versio
#24 1113.1            n "7.85.0")
#24 1113.1      24    -- Found UUID : /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/util
#24 1113.1            -linux-uuid-2.38.1-45xrjgjjauvev5qarwji7xgmlnhqlzkh/lib/libuuid.so
#24 1113.1      25    -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE)
#24 1113.1   >> 26    CMake Error at /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake
#24 1113.1            -3.24.3-6doi3daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/Fi
#24 1113.1            ndPkgConfig.cmake:663 (message):
#24 1113.1      27      pkg-config tool not found
#24 1113.1      28    Call Stack (most recent call first):
#24 1113.1      29      /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake-3.24.3-6doi3
#24 1113.1            daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/FindPkgConfig.c
#24 1113.1            make:829 (_pkg_check_modules_internal)
#24 1113.1      30      CMakeLists.txt:39 (pkg_check_modules)
#24 1113.1      31    
#24 1113.1      32    
```

Ref: https://github.com/scitokens/scitokens-cpp/blob/v1.0.0/CMakeLists.txt#L32
 2023-04-27 00:02:55 +02:00
Trevor [LAS]
055e5abc93 py-ipyrad (#37160) 
* Adding py-ipyrad for testing

* py-ipyrad: placating flake8

* py-ipyrad: adding version 0.9.90, fixing hard coded path.

* py-ipyrad: use join_path instead of hard coded linux path

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipyrad: Removing unneeded dependencies

* py-ipyrad: Readded future (see ipyrad setup.py)

* py-ipyrad: Switch to an anchored link in the docs

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipyrad: Removed patch decorator

---------

Co-authored-by: snehring <snehring@iastate.edu>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2023-04-26 17:04:57 -04:00
Michael Kuhn
16f86c7f96 rocksdb: add 8.1.1 (#37169) 2023-04-26 10:07:42 -07:00
Michael Kuhn
0292568f97 libbson, mongo-c-driver: add 1.23.3 (#37175) 2023-04-26 10:05:45 -07:00
Gerhard Theurich
61c24dc7c3 esmf: add v8.4.2 (#37183) 2023-04-26 10:03:13 -07:00
Alec Scott
cbb8900e6e genrich: add v0.6.1 (#37184) 2023-04-26 10:01:59 -07:00