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Author SHA1 Message Date
Mark Olesen
8b275080ea update OpenFOAM patch versions (#15916) 
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
 2020-04-07 11:57:07 -05:00
Massimiliano Culpo
2dece3aee8 cryptsetup: restrict the version of automake if @2.2.1 (#15918) 
* cryptsetup: restrict the version of automake if @2.2.1

fixes #15706

* Update var/spack/repos/builtin/packages/cryptsetup/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-04-07 11:56:54 -05:00
Themos Tsikas
375e1c62c7 NAG Compiler 7.0 (Build 7014) download checksum (#15899) 
* NAG Compiler 7.0 (Build 7009) download checksum

* NAG Compiler 7.0 (Build 7014) download checksum
 2020-04-07 11:38:11 -05:00
Jennifer Herting
e34ea80d52 New package: boinc-client (#15770) 
* [boinc-client] Created template

* [boinc-client] removed non-client version

* [boinc-client] added description and homepage

* [boinc-client] specifically specify this as a client release

* [boinc-client] added dependencies

* [boinc-client] added variant: manager

* [boinc-client] added graphics variant

* [boinc-client] added dependency version specificity

* [boinc-client] systemd install path fix

* [boinc-client] added sqlite dependency

* [boinc-client] flake8

* [boinc-client] cleaned up left over fixme
 2020-04-07 11:21:49 -05:00
LPettey-Arm
da9ba2b254 Add build number to Arm compiler version identification (#15809) 
* Add capability for detecting build number for Arm compilers

* Fixing fleck8 errors and updating test_arm_version_detection function for more detailed Arm compielr version detection

* Ran flake8 locally and corrected errors

* Altering Arm compielr version check to remove else clause and be more consistent with other compielr version checks. Added test case so both the 'if' and 'else' conditionals of the Arm compiler version check have a test case

Co-authored-by: EC2 Default User <ec2-user@ip-172-31-7-135.us-east-2.compute.internal>
 2020-04-07 10:58:54 -05:00
Massimiliano Culpo
f83d46bb79 intel: fixed version number (update4 is 18.0.5) (#15915) 
fixes #15811

See https://software.intel.com/en-us/articles/intel-compiler-and-composer-update-version-numbers-to-compiler-version-number-mapping
 2020-04-07 15:47:22 +02:00
Toyohisa Kameyama
ae94c52f1c ppOpen-APPL/FEM: New package. (#15911) 
* ppOpen-APPL/FEM: New package.

* typo fix.
Update patch.
 2020-04-07 08:43:46 -05:00
Adam J. Stewart
93e22426a6 Don't run linux build tests for doc PRs (#15895) 2020-04-07 09:09:08 +02:00
Adam J. Stewart
34bce8f4a2 Simplify Build Error template (#15864) 2020-04-06 19:28:13 -05:00
Adam J. Stewart
783793426d Package rename: DNNL -> oneDNN (#15910) 2020-04-06 19:27:34 -05:00
Matthias Diener
e7a529322f fish: add version 3.1.0 and switch to cmake (#15812) 
Versions < 3 do not support building with CMake.
 2020-04-06 19:25:39 -05:00
Diego Magdaleno
2542d80e10 Update nano and fix coreutils on Darwin (#15883) 
* Fixed building coreutils on Darwin

* Bump nano version to 4.9

* Coreutils: Add program prefix g so we don't conflict with Apple utilities

* Fix intendation

* Make format more spack like

* Removed unnecesary changes

* Merge branch 'develop' of github.com:DiegoMagdaleno/spack into develop

Fix linking libgit2 on Darwin

* Revert "Merge pull request #3 from spack/develop"

This reverts commit 58dbbdb82b, reversing
changes made to dd7a413f48.

* Revert "Revert "Merge pull request #3 from spack/develop""

This reverts commit f956aa7b13.

* Revert "Merge branch 'develop' of github.com:DiegoMagdaleno/spack into develop"

This reverts commit 50321f7986.
 2020-04-06 19:23:05 -05:00
Andrew W Elble
6ad0ca27c2 new package: nccl-tests (#15890) 
* new package: nccl-tests

* fix dependency types
 2020-04-06 19:21:36 -05:00
Andrew W Elble
26a754c023 new package: py-tensorboard-plugin-wit (#15898) 
* new package: py-tensorboard-plugin-wit

dependency for py-tensorboard >= 2.2.0

* incorporate feedback
 2020-04-06 19:21:16 -05:00
Carson Woods
379319ee2d pdt: add PIC support as variant (#15851) 
* Add fPIC support as variant

* Fix variant to use compiler agnostic fPIC option
 2020-04-06 16:20:21 -05:00
Andrew W Elble
9d906658b3 nccl: supports infiniband/RoCE since 2.3.5-5 (#15889) 
loads libibverbs via dlopen(), add dependency on rdma-core
 2020-04-06 16:19:55 -05:00
Andrew W Elble
ebd0b14ad1 new package: py-google-auth-oauthlib (#15900) 2020-04-06 16:10:43 -05:00
Adam J. Stewart
fab1f68399 Docs: fix Spack Environments command (#15891) 2020-04-06 11:54:22 -05:00
Adam J. Stewart
18a9a265fd py-smart-open: fix url/checksum, add deps (#15892) 2020-04-06 11:16:20 -05:00
Dr. Christian Tacke
b1bea70df1 nanomsg: add new Package (#15894) 2020-04-06 11:15:57 -05:00
François Trahay
55d15fc07e new packages: libbacktrace, libpfm, numap, numamma (#15868) 
* new packages: libbacktrace, libpfm, numap, numamma

* numap: use the existing libpfm4 package

* formatting
 2020-04-06 08:01:58 -05:00
Massimiliano Culpo
06f3381dfd Blacklist Lmod variable modifications when sourcing files (#15778) 
fixes #15775

Add all the variables listed here:

https://lmod.readthedocs.io/en/latest/090_configuring_lmod.html

to the list of those blacklisted when constructing environment
modifications by sourcing files.
 2020-04-06 10:02:03 +02:00
Jonathon Anderson
359d7adf7e Source devnull in environment_after_sourcing_files (closes #15775) (#15791) 
spack.util.environment_after_sourcing_files compares the local
environment against a shell environment after having sourced a
file; but this ends up including the default shell profile and
rc, which might differ from the local environment.

To change this, compare against the default shell environment,
expressed here as 'source /dev/null'.
 2020-04-06 10:00:42 +02:00
Christoph Junghans
268c2a19da boost: boost-python in 1.72.0 broken with cxxstd=98 (#15885) 
* boost: boost-python in 1.72.0 broken with cxxstd=98

* py-espressopp: depend on boost with cxxstd=11
 2020-04-05 18:42:27 -05:00
Adam J. Stewart
1249d73630 py-spatialist: add maintainer and new version, fix url and deps (#15878) 2020-04-05 17:31:09 -05:00
Adam J. Stewart
a08d5fed0a py-flake8-polyfill: fix url and deps (#15872) 2020-04-05 15:45:29 -05:00
Adam J. Stewart
2a074ce445 py-gensim: fix url and deps, add maintainer (#15870) 2020-04-05 15:45:17 -05:00
Adam J. Stewart
638e6d0f9e py-humanfriendly: add new version, fix url and deps (#15873) 2020-04-05 15:45:04 -05:00
Adam J. Stewart
e359bb91e9 py-pep8-naming: add new version, fix url and deps (#15874) 2020-04-05 15:44:50 -05:00
Adam J. Stewart
4dc034a8e5 py-progressbar2: add new version, fix url (#15875) 2020-04-05 15:44:36 -05:00
Adam J. Stewart
f5fde735b6 py-python-utils: add new version, fix url and deps (#15876) 2020-04-05 15:44:23 -05:00
Adam J. Stewart
d87f44e987 py-scoop: fix url and deps (#15877) 2020-04-05 15:44:10 -05:00
Adam J. Stewart
cf68193ebe py-tblib: add new version, fix url and deps (#15879) 2020-04-05 15:43:20 -05:00
Adam J. Stewart
a3b9dbcbfb package urls: pypi.org -> pypi.io (#15880) 2020-04-05 15:43:09 -05:00
Adam J. Stewart
68b4beb725 py-sphinx: add 3.0.0 (#15881) 2020-04-05 15:42:57 -05:00
Adam J. Stewart
05532f9e27 py-ecdsa: add new version, fix download url (#15871) 2020-04-05 15:42:44 -05:00
Stephen McDowell
51fbe518b8 verify other.exe attr exists before use in __eq__ (#15882) 2020-04-05 14:08:13 -05:00
健美猞猁
34627fcbe5 py-pywcs: a new package. (#15826) 
* py-pywcs: a new package.

* Fix a flake8 issue.

* Add missing dependencies.

* run -> build.

* Add version specifications.
 2020-04-05 11:21:54 -05:00
François Trahay
c99a88128a Version bump: eztrace-1.1-10 (#15866) 
* version bump: eztrace-1.1-10

* 'trahay' is the maintainer for package 'eztrace'
 2020-04-05 09:39:57 -05:00
Christoph Junghans
b4271d1a26 py-espressopp: pin py-numpy to py2 version (#15865) 2020-04-04 13:00:04 -05:00
darmac
7f8102d6d0 openjdk: support aarch64 platform (#15840) 2020-04-04 11:35:46 -05:00
Adam J. Stewart
9b9b46c0a9 Package rename: intel-mkl-dnn -> dnnl (#15852) 2020-04-04 11:35:23 -05:00
Nichols A. Romero
4ee9fd46bc LLVM support for mlir (#15859) 2020-04-04 11:12:21 -05:00
Simon Pintarelli
4bb1392d7d SIRIUS add version 6.5.1 and 6.5.2 (#15860) 2020-04-04 11:11:17 -05:00
健美猞猁
a7f418e0b2 Check if CPU family is x86_64. (#15862) 
* Check if CPU family is x86_64.

* Remove the leading space.
 2020-04-04 11:10:48 -05:00
Jennifer Herting
0891c5d854 New package: py-gluoncv (#15856) 
* [py-gluoncv] created template

* [py-gluoncv] added description and homepage

* [py-gluoncv] added dependencies

* [py-gluoncv] unicode in readme is causing build to fail

* [py-gluoncv] cleaned up fixmes

* [py-gluoncv] removed unnecessary python dependency listing

* [py-gluoncv] added cython
 2020-04-03 15:49:21 -05:00
G-Ragghianti
bf8fea1d53 Added support for new config process for papi@6:+lmsensors (#15858) 
* Added support for new configuration process of lmsensors component for papi@6:

* Removed extraneous blank lines
 2020-04-03 15:48:44 -05:00
Matthieu Dorier
4173c27868 unqlite: restricted patch to version 1.1.9 (#15857) 
* restricted unqlite patch to version 1.1.9

* putting back the URL of the PR corresponding to the patch
 2020-04-03 15:48:29 -05:00
G-Ragghianti
bae4f91bfe Add option "--first" for "spack load" (#15622) 
* Implemented --first option for "spack load"

* added test for "spack load --first"

Co-authored-by: gragghia <gragghia@localhost.localdomain>
 2020-04-03 13:33:20 -07:00
Peter Scheibel
0b99cc2261 Environments/views: only override spec prefix for non-external packages (#15475) 
* only override spec prefix for non-external packages

* add test that environment shell modifications respect explicitly-specified prefixes for external packages

* add clarifying comment
 2020-04-03 13:26:33 -07:00