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Author SHA1 Message Date
Massimiliano Culpo
e32009a7e3 openscenegraph: fix self-referential dependencies (#42541) 2024-02-07 16:53:44 +01:00
Massimiliano Culpo
b0f3489d68 py-*: fix self-referential dependencies (#42548) 2024-02-07 16:52:26 +01:00
simonLeary42
9099e4c233 libcatalyst cmake_minimum_required (#42532) 
d469357740
 2024-02-07 16:10:46 +01:00
Vanessasaurus
a1b895e547 flux-core: add v0.59.0 (#42536) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2024-02-07 16:10:05 +01:00
Vanessasaurus
df1ff0affa flux-pmix: add v0.5.0 (#42537) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2024-02-07 16:09:34 +01:00
George Young
95e828f3d8 s4pred: add new package (#42520) 2024-02-07 16:05:14 +01:00
Rocco Meli
a28c6caac0 dbcsr: examples variant (#42543) 2024-02-07 15:54:19 +01:00
Rocco Meli
514260d8cb cp2k+mpi requires dbcsr+mpi (#42545) 2024-02-07 15:35:20 +01:00
Massimiliano Culpo
642ec1918f julia: fix self-referential dependencies (#42486) 2024-02-07 08:46:03 +01:00
Massimiliano Culpo
bdae9f776b netcdf-c: fix self-referential dependencies (#42528) 2024-02-07 08:22:56 +01:00
Massimiliano Culpo
5c86a3cca2 lammps: fix self-referential dependencies (#42521) 2024-02-07 08:22:11 +01:00
Massimiliano Culpo
ea53008604 molgw: fix self-referential dependencies (#42523) 2024-02-06 19:01:44 +01:00
Massimiliano Culpo
01ea8f46e7 ldak: fix self-referential dependencies (#42522) 2024-02-06 17:45:40 +01:00
jalcaraz
ff1e700b56 TAU: Added new test for other variants. (#42503) 
Now it tests all GPUs, syscall and python.
 2024-02-06 08:37:22 -08:00
renjithravindrankannath
5efa723289 mesa: updating llvm dependency for version 23 (#42481) 2024-02-06 14:53:31 +01:00
Massimiliano Culpo
4985f87a52 dbcsr: fix self-referential dependencies (#42482) 2024-02-06 14:41:27 +01:00
Massimiliano Culpo
ae000f963c hpx: remove self-referential dependencies (#42485) 
This shouldn't be an issue, but avoid self references
on "^asio".
 2024-02-06 13:37:40 +01:00
Olivier Cessenat
0960f691a1 keepassxc: new version 2.7.6 (#42478) 
AUTOTYPE is set by default in the 2.7.6 release, it was not previously.
 2024-02-05 18:24:42 +01:00
Mosè Giordano
713b19cac7 py-pythran: apply patch to fix compilation with GCC 13 (#42490) 
* py-pythran: apply patch to fix compilation with GCC 13

* Update var/spack/repos/builtin/packages/py-pythran/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-05 09:08:41 -07:00
Thomas Madlener
05f1f07e51 edm4hep: add v0.10.4 (#42488) 2024-02-05 07:43:51 -07:00
Mosè Giordano
955a01dfa4 hh-suite: apply patch to fix compilation with GCC 13 (#42489) 
This fixes errors like
```
     294    In file included from /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.cpp:8:
  >> 295    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:37:37: error: 'uint16_t' has not been declared
     296       37 |   void writeU16(std::ostream& file, uint16_t);
     297          |                                     ^~~~~~~~
  >> 298    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:38:28: error: 'uint16_t' has not been declared
     299       38 |   void readU16(char** ptr, uint16_t &result);
     300          |                            ^~~~~~~~
  >> 301    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:40:37: error: 'uint32_t' has not been declared
     302       40 |   void writeU32(std::ostream& file, uint32_t);
     303          |                                     ^~~~~~~~
  >> 304    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:41:27: error: 'uint32_t' has not been declared
     305       41 |   void readU32(char**ptr, uint32_t &result);
     306          |                           ^~~~~~~~
```
 2024-02-05 07:38:49 -07:00
Massimiliano Culpo
928ee7569c ecp-data-vis-sdk: remove self-referential dependencies (#42484) 
This shouldn't be an issue, but express this limitation
with a conflict.
 2024-02-05 15:17:46 +01:00
George Young
8190903821 motioncor2: add v1.6.4 (#42380) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
 2024-02-05 14:32:38 +01:00
George Young
473347df41 kentutils: update to @459, update download location & deps (#42448) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2024-02-05 04:23:33 -07:00
Adam J. Stewart
1ef52d7c8e py-pytest: add v8.0.0 (#42344) 2024-02-05 12:16:58 +01:00
Tom Payerle
561fe13bad cgal: add v5.3.2 (#42378) 2024-02-05 12:08:27 +01:00
George Young
c15ed38cef star: updating to 2.7.11a (#42011) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2024-02-05 12:06:01 +01:00
David Boehme
fa4568d9c9 kripke: add adiak dependency with Caliper enabled (#42414) 2024-02-05 11:17:24 +01:00
Nathalie Furmento
ef4f78a6cd starpu: add release 1.4.4 (#42446) 2024-02-05 11:12:50 +01:00
Adam J. Stewart
da36d069db py-lightly: fix conflict definition (#42449) 2024-02-05 11:11:23 +01:00
Cameron Rutherford
6ff3e17a7d hiop: require RAJA when cuda is enabled (#42407) 2024-02-05 11:04:08 +01:00
snehring
bb200be57d sentieon-genomics: add new version 202308.02 (#42465) 2024-02-05 11:01:00 +01:00
Olivier Cessenat
a238563fdb mpfr: add v4.2.1 (#42479) 2024-02-05 02:59:22 -07:00
Adam J. Stewart
bfc6f1d2a9 py-lightning: add v2.1.4 (#42468) 2024-02-05 10:59:00 +01:00
Olivier Cessenat
99b8a08366 stripack: sets the licence SPDX (#42473) 2024-02-05 10:45:23 +01:00
Olivier Cessenat
dba5ae939d visit-ffp and visit-unv: sets the licence SPDX (#42474) 2024-02-05 10:42:07 +01:00
Olivier Cessenat
7a4aa823d1 ngspice: new version 42 (#42475) 2024-02-05 10:41:06 +01:00
Olivier Cessenat
89e387cb67 latex2html: new version 2024 (#42476) 2024-02-05 10:38:24 +01:00
Olivier Cessenat
19c46de69f nlopt: new version 2.7.1 (#42477) 2024-02-05 10:27:01 +01:00
Michael Kuhn
e35fbfab77 gtkplus: add v3.24.41 and fix CUPS problems (#42480) 
Fixes #42297
 2024-02-05 10:23:57 +01:00
Massimiliano Culpo
478203dc68 asio: remove self-referential dependencies (#42469) 
These shouldn't be an issue, but they can be expressed
in terms of variants on the package.
 2024-02-05 10:10:58 +01:00
Massimiliano Culpo
5713ffd143 converge: fix self-referential dependencies (#42471) 2024-02-05 10:03:20 +01:00
Elsa Gonsiorowski, PhD
1711b6dee1 scr: fix @develop dependency versions (#42379) 2024-02-05 09:15:19 +01:00
Massimiliano Culpo
7fbd4afaaa cp2k: fix self-referential dependencies (#42472) 2024-02-05 09:12:47 +01:00
Massimiliano Culpo
f396dbcb4f berkeleygw: fix self-referential dependencies (#42470) 
Also, remove a couple of duplicate directives
 2024-02-05 09:04:32 +01:00
David Guibert
57fe3430fd py-pymummer: init (#42412) 
* py-pymummer: init

* Update py-pymummer copyright date

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-04 06:27:46 -07:00
snehring
8428bef040 py-ete3: adding version 3.1.3 (#42462) 2024-02-04 06:12:19 -06:00
George Young
47c91c9163 ldsc: new package @2.0.1 (#42430) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
 2024-02-04 06:06:45 -06:00
David Guibert
6c57360eac py-pyfastaq: init (#42413) 2024-02-04 05:50:44 -06:00
George Young
624292d685 sicer2: new Python package @1.0.3 (#42383) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
 2024-02-04 05:17:27 -06:00