Commit Graph

36435 Commits

Author SHA1 Message Date
Joe Schoonover
6f51b543f0
Update hohqmesh and feq-parse packages (#44737)
* Update hohqmesh and feq-parse versions
   Update feq-parse homepage to new documentation page
   Update feq-parse license to be consistent with 2.2.2 release

---------

Co-authored-by: fluidnumerics-joe <fluidnumerics-joe@users.noreply.github.com>
2024-06-19 14:54:58 -07:00
Christian Glusa
3316e49ad3
Binder: Add newer version (#44741) 2024-06-19 11:14:43 -07:00
Stephen Nicholas Swatman
0c4a91cd18
actsvg: add versions up to 0.4.44 (#44770)
This commit adds new versions of actsvg. I have also taken the liberty
of adding myself a maintainer as I work actively on the ACTS project and
its dependencies, and would like to start keeping the Spack specs more
up to date.
2024-06-19 11:13:17 -07:00
Dave Keeshan
07c6c3ebac
verilator: add v5.026 (#44757) 2024-06-19 11:07:56 -07:00
SXS Bot
e3a4a07616
spectre: add v2024.06.18 (#44761)
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2024-06-19 11:06:12 -07:00
Stephen Nicholas Swatman
57467139e5
covfie: new package (#44771)
This commit adds the covfie package which facilitates the
high-performance storage of vector fields and other structured
multi-dimensional data.
2024-06-19 10:34:32 -07:00
Carlos Bederián
e8bc53f37b
ucx: add v1.17.0 (#44767) 2024-06-19 13:24:54 +02:00
Dan Bonachea
3b78515fd4
upcxx package: Add resilience to broken libfabric (#44618)
Some systems have a libfabric install that doesn't work, so don't
drop dead if a call to `fi_info` fails (e.g. due to missing shared libraries)
2024-06-18 18:10:04 -07:00
downloadico
6b052c3af9
Abinit fix hdf5 (#44763)
* abinit: fix locating HDF5
Remove the check in the configure script to locate HDF5.  Replaced by using
Spack to locate the package.
2024-06-18 16:28:11 -06:00
AcriusWinter
37e2d46d7d
Legion: Reformatted Old To New Test Method and skipping tests (#44733)
* Legion: reformatted old test method to match new test method
* Updated docstring and how cmake file is opened
2024-06-18 12:18:56 -07:00
eugeneswalker
a389eb5a08
e4s external rocm ci: bump rocm stack to v6.1.1 (#44449)
* e4s external rocm ci: bump rocm stack to v6.1.1

* comment out exago+rocm due to issue with raja@0.14.0 see spack issue #44593

* comment out adios2+rocm due to spack issue #44594

* comment out petsc+rocm due to spack issue #44600

* comment out sundials+rocm due to spack issue #44601

* comment out slepc+rocm due to petsc spack issue #44600

* comment out tau+rocm due to spack issue #44659

* comment out ecp-data-vis-sdk due to spack issue #44745

* packages: register rocm-core as external

* re-enable tau due to issue #44659 having been resolved

* use latest ci image: ecpe4s/ubuntu22.04-runner-amd64-gcc-11.4-rocm6.1.1:2024.06.17

* comment out paraview due to spack issue #44745

* comment out ecp-data-vis-sdk +vtkm due to issue https://gitlab.spack.io/spack/spack/-/jobs/11632511
2024-06-18 11:43:03 -07:00
Neil Flood
d57f174ca3
py-rios: add 1.4.17, v2.0.1 (#44679)
* Update for 2.0.1
* cloudpickle dependency is only 'run'
* Follow new formatting guidelines
* black wants trailing commas
* Simplified version ranges, as recommended by @tldahlgren
2024-06-18 10:35:43 -06:00
AcriusWinter
e6ae42b1eb
vtk-m: Changed test method names and skipping non-applicable tests from old to new approach (#44705)
* vtk-m: Changed test method names and skipping non-applicable tests from old to new approach

-----
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-18 09:40:17 -06:00
George Young
d911b9c48d
seacr: new package @1.4-b2 (#42677)
* seacr: new package @1.4-b2

* Update var/spack/repos/builtin/packages/seacr/package.py

Co-authored-by: Alec Scott <hi@alecbcs.com>

---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-06-18 07:37:58 -07:00
Tim Haines
3b35b7f4fa
Boost: switch from jfrog to boost.io for downloads (#44728)
The jfrog hosting will be shut down in Dec 2024.
2024-06-18 08:40:03 +02:00
dependabot[bot]
a82fb33b31
build(deps): bump flake8 from 7.0.0 to 7.1.0 in /lib/spack/docs (#44752) 2024-06-18 08:27:15 +02:00
dependabot[bot]
5f35a90529
build(deps): bump urllib3 from 2.2.1 to 2.2.2 in /lib/spack/docs (#44751) 2024-06-18 08:27:04 +02:00
dependabot[bot]
81c620b61b
build(deps): bump flake8 from 7.0.0 to 7.1.0 in /.github/workflows/style (#44750) 2024-06-18 08:26:18 +02:00
Chris White
12866eb0d6
ascent: add v0.9.3 (#44571)
* add new ascent version
* add requirement for new version of umpire/raja
* add patch for vtk-m dependency
2024-06-17 19:37:50 -06:00
arezaii
24b8d0666e
Chapel package: major update (#42197)
* add cray detection taken from upcxx
* add CUDA/ROCm support
* add numerous pass-through options to Chapel build,
  like gpu_mem_strategy, comm_substrate, etc.; all variants are
  translated to analogous CHPL_* environment variables. As a side
  effect, this defines a number of environment variables that are
  not actually used by Chapel.
* Define LD_LIBRARY_PATH, LIBRARY_PATH, and PKG_CONFIG_PATH to
  help programs built with Chapel properly locate needed runtime
  dependencies

---------

Co-authored-by: bonachea <dobonachea@lbl.gov>
2024-06-17 18:09:05 -06:00
Tamara Dahlgren
0f2c7248c8
Bugfix: omega-h stand-alone tests: ensure proper ordering (#44748) 2024-06-17 15:17:30 -06:00
Alec Scott
8cc4ad3ac5
pass: install autocompletion for all shells (#44744) 2024-06-17 12:35:02 -07:00
Dan Lipsa
9ba90e322e
PROJ: add new versions, improve tiff patches (#42767)
* Projsync needs curl

This fixes a proj compilation error from paraview

* tiff does not set TIFF_INCLUDE_DIR tested by proj

* TIFF patch exists for proj 9.2

* Add comments with location of proj patch

* Use TIFF patches for different cmake versions

* Use modules starting cmake 3.28 and variables before that

* Fix black style

* Simpler patches, add newer proj

* Remove duplicated flag

* Deprecate PROJ 4.8 and older

* Remove PRIVATE

* Deprecate PROJ 7.0.0

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-06-17 15:33:22 +02:00
Taillefumier Mathieu
d9c6b40d8e
[cp2k] Enforce exclusion of libxsmm main (#44739)
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-06-17 07:30:15 -06:00
Alberto Invernizzi
d792e1f052
update minimum libvterm version for 0.10.0 (#44720)
7a5effb0f9
2024-06-15 21:15:50 -07:00
Todd Gamblin
2d464f8c89
spack-python: remove superfluous /usr/bin/env (#44724)
Not sure why I had this here, as `/bin/sh` will find the first spack in `PATH` just like
`env`.

- [x] remove `/usr/bin/env` and avoid an extra process launch.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-06-15 08:11:19 -07:00
AcriusWinter
456a8e3553
omega-h: reformatted from old test method to new test method (#44712)
* omega-h: reformatted from old test method to new test method
* omega-h: added proper output checking

--------
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-14 20:03:39 -06:00
AcriusWinter
db94696cf0
libstdcompat: removed duplicate build-time test method (#44725)
* libstdcompat: removed stand-alone test method
2024-06-14 18:40:03 -06:00
kwryankrattiger
72bb656b9e
Intel MKL express requirements as requires (#44727)
The ``+cluster` variant requires there be an MPI family known in the
spec. When using externals it is easy to miss-configure this requirement
leading to a runtime exception which is not desirable. This converts the
exception to a package rule.
2024-06-14 19:07:37 -04:00
James Smillie
e092026eb8
muparser: refactor to use new multi-build-system logic (#44552) 2024-06-14 13:43:20 -07:00
psakievich
e5f5749d67
HDF5: Fix typo in symlink paths (#44711) 2024-06-14 12:48:32 -06:00
renjithravindrankannath
6e4f8ea7e4
hip: Adding hipother for cuda support starting from 6.0 (#44453)
* Adding hipother for cuda support starting from 6.0
* Updating the version check as per current spec
2024-06-14 08:26:07 -07:00
Massimiliano Culpo
5e8eff24d2
Build developer-tools pipeline only on manylinux (#43811) 2024-06-14 10:13:06 +02:00
Alec Scott
36f1801eb8
rclone: add v1.65.2 (#44657) 2024-06-13 21:28:14 -05:00
Alec Scott
e3deee57ba
go: add v1.22.4 (#44656) 2024-06-13 21:28:06 -05:00
Alec Scott
404deb99f4
hugo: add v0.127.0 (#44626) 2024-06-13 21:27:56 -05:00
Alec Scott
f594bc7aea
fd: add v10.1.0 (#44623) 2024-06-13 21:27:46 -05:00
Harshula Jayasuriya
9ed948523a
openmpi: disable remark 10441 for intel classic 2021.7.0 or newer (#44614)
* Compilation of openmpi fails when intel classic compiler 2021.7.0
  or newer is used.
2024-06-13 17:58:50 -07:00
Wouter Deconinck
72d7c2d558
xorg pkgs: update versions and homepage cgit -> gitlab (#44420)
* xorg libs: new versions
* xorg pkgs: update homepage from cgit to gitlab
* xorgs pkgs: fix homepage since, yeah, I did edit those 122 files by hand...
* libxmu: don't need the .0 patch version here

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-13 17:42:17 -07:00
Matt Thompson
d4a7582955
gh: add 2.50.0 (#44670) 2024-06-13 16:46:52 -07:00
dependabot[bot]
42ac1f0cb2
build(deps): bump codecov/codecov-action from 4.4.1 to 4.5.0 (#44710)
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 4.4.1 to 4.5.0.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)
- [Commits](125fc84a9a...e28ff129e5)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-06-13 16:45:24 -07:00
Mathew Cleveland
4af61d432f
add draco-7_18_0 to package.py (#44673)
Co-authored-by: Cleveland <cleveland@lanl.gov>
2024-06-13 16:43:00 -07:00
Teague Sterling
52bdaa7bf5
perl-dbd-mysql: add v4.052, v5.005 (#44503)
* Fixed some issues with installation breaking due to mysql_client

* Remove debugging details

* Adding client_only to deps

* Adding client_only to variant and deps

* Undoingw client_only to variant and deps
2024-06-13 16:42:23 -07:00
Diego Alvarez S
96b42238c5
openjdk: update default version to 17.x (#44647)
* Set default version of OpenJDK to 17.x

* Fix OpenJDK newer versions in Apple Silicon

* Specify java@11 for astral and stc
2024-06-13 16:40:50 -07:00
Teague Sterling
c7bd259739
Adding pkgconfig dependecy to startup-notification (#44709)
Signed-off-by: Teague Sterling <teaguesterling@gmail.com>
2024-06-13 17:37:51 -06:00
Jonathon Anderson
0dfc360b1e
hpctoolkit: conflicts with elfutils @0.191 (#44696)
See https://gitlab.com/hpctoolkit/hpctoolkit/-/issues/831
2024-06-13 12:25:37 -07:00
AcriusWinter
5e578e2e4e
Converted warpx from the old format to the new format for stand-alone testing (#44677)
* Converted warpx from the old format to the new format for stand-alone testing

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-13 11:34:17 -07:00
AcriusWinter
93111d495b
Changed sz3 stand alone tests from old to new API (#44691) 2024-06-13 10:45:16 -07:00
Howard Pritchard
b1bbe240d7
py-xtb: fix problem with meson file (#44595)
Using meson 1.3.2 the py-xtb package fails
during the install process.  Error signature shown in

    https://github.com/grimme-lab/xtb-python/pull/114

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2024-06-13 10:18:42 -07:00
Jean Luca Bez
bbb58ff4c6
update PDC version (#44702) 2024-06-13 11:15:33 -06:00