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16396 Commits

Author SHA1 Message Date
lpoirel
f8794afcbd
petsc: add +hwloc and +openmp variants (#23675) 2021-06-01 03:37:19 -06:00
Mark W. Krentel
389b02cf71
hpctoolkit: update recipe, add v2021.05.15 (#24017) 
1. add version 2021.05.15.
2. add patch to build old revs with gcc 11.x, version 2021.15.05
already has patch integrated, fixes #23667.
3. add variant +debug to build unoptimized, debug version.
4. add variant +viewer to include hpcviewer and add viewer path to
hpctoolkit module.
5. add dependency on memkind to workaround a glibc problem found on
some Cray platforms.
 2021-06-01 02:31:48 -06:00
Matthieu Dorier
2cd8139cd7
spdlog: add v1.8.2-v1.8.5, adjusted required version of cmake (#23993) 2021-06-01 10:28:33 +02:00
iarspider
e4edbe89cc
COOL: add new package (#23006) 
Co-authored-by: George Hartzell <hartzell@alerce.com>
 2021-06-01 10:12:55 +02:00
Michael Kuhn
f1d2ab38a0
enzo: add main branch (#24010) 
We also keep around master for compatibility and map it to main.
 2021-06-01 10:10:37 +02:00
Adam J. Stewart
ab254e7d86
py-numcodecs: fix import_modules tests (#24015) 2021-06-01 10:00:53 +02:00
Adam J. Stewart
c596dba039
py-psycopg2: need link dep on postgresql (#24016) 2021-06-01 10:00:35 +02:00
Harmen Stoppels
26e1a8287f
Bump cmake (#24043) 2021-06-01 09:41:52 +02:00
Michael Kuhn
f35c3ef9ef
perl: add 5.34.0 (and 5.35.0) (#24047) 2021-06-01 09:41:36 +02:00
Seth R. Johnson
976a97f045
formetis: add new package (#24048) 2021-06-01 09:32:20 +02:00
Ben Darwin
40803365f3
cctools: add v7.2.10 (#24051) 2021-06-01 09:01:55 +02:00
Mark W. Krentel
5fb68b4441
elfutils: add v0.183 through v0.185 (#24052) 2021-06-01 09:01:32 +02:00
Hadrien G
175e6e8c1e
acts: add v8.3.0 (#24053) 2021-06-01 08:59:33 +02:00
Manuela Kuhn
ea4a2c9120
py-lxml: add 4.6.3 (#24037) 
* py-lxml: add 4.6.3

Also add missing libxml2 and libxslt versions dependencies [1]

[1] https://github.com/lxml/lxml/blob/lxml-4.6.3/INSTALL.txt

* Update var/spack/repos/builtin/packages/py-lxml/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-lxml: remove cython dependency again

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-31 17:34:28 -06:00
Manuela Kuhn
e5513f914e
py-prov: add new package (#24040) 2021-05-31 17:10:29 -06:00
Manuela Kuhn
1fae271be8
py-click: add 8.0.1 (#24041) 2021-05-31 17:46:20 -05:00
Manuela Kuhn
c6da94473d
py-traits: add 6.2.0 (#24044) 2021-05-31 16:48:19 -05:00
Manuela Kuhn
adf2e8230a
py-simplejson: add 3.17.2 (#24042) 
Also fix python version dependency.
 2021-05-31 16:47:28 -05:00
Manuela Kuhn
f3d506b582
py-networkx: add 2.5.1 (#24038) 2021-05-31 16:42:12 -05:00
Manuela Kuhn
647bee732c
py-nibabel: add new package (#24036) 2021-05-31 16:36:23 -05:00
Manuela Kuhn
9d0b8208e4
py-packaging: add 20.9 (#24034) 2021-05-31 16:35:04 -05:00
Manuela Kuhn
9a902b67a1
py-etelemetry: add new package (#24033) 2021-05-31 15:34:22 -06:00
Manuela Kuhn
444ba3d4cf
py-ci-info: add new package (#24031) 2021-05-31 16:14:13 -05:00
Manuela Kuhn
bc78cf3a2c
py-pydot: add v1.4.2 (#24039) 2021-05-31 19:26:55 +00:00
Manuela Kuhn
c8df8f2702
py-requests: add 2.25.1 (#24032) 2021-05-31 12:59:25 -05:00
Harmen Stoppels
7bae865c7e
Propagate openmp to blas for sirius and spla (#24027) 
And also update lowerbounds of dependencies
 2021-05-31 14:16:00 +00:00
h-murai
8cdf42e1db
Bugfix: not providing fftw-api@3 (#24024) 2021-05-31 04:01:42 -06:00
Valentin Volkl
ae2fc50861
xqilla: add patches for newer xerces-c, gcc (#24021) 2021-05-31 03:49:23 -06:00
Michael Kuhn
c4e4d3587b
libfabric: add debug variant (#24018) 2021-05-31 09:50:32 +02:00
Valentin Volkl
7bdd906580
vbfnlo: add missing build dependencies (#24022) 2021-05-30 19:26:39 +02:00
Paul R. C. Kent
d4585f4328
New versions: py-sphinxcontrib-bibtex, py-sphinx-rtd-theme, py-pybtex-docutils, py-pybtex (#24009) 
* New versions

* update deps

* py-sphinxcontrib-bibtex deps
 2021-05-29 20:52:36 -05:00
Paul R. C. Kent
120c718da5
New versions: py-gpaw, py-ase (#24008) 
* New gpaw and ase versions

* Update ase deps

* flask dep removed after 3.18.0
 2021-05-29 23:05:16 +00:00
Seth R. Johnson
9936182f60
qt: skip multimedia when ~opengl (#23989) 
* qt: skip multimedia when ~opengl

On 5.9 on macOS the multimedia option causes build errors; on other
platforms and versions it should probably be assumed inoperative anyway.

* qt: Omit flags when disabling multimedia

```
ERROR: Unknown command line option '-no-pulseaudio'.
```

* Work around another qt@5.9 error

* qt: Fix build error on darwin
 2021-05-29 20:53:25 +02:00
Desmond Orton
9b99f85abf
New Package:py-ucsf-pyem (#23961) 
* New Package:py-ucsf-pyem

* Dep additions, eun env deletion

* extraction step change

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 13:28:14 -06:00
Ken Raffenetti
3c9c3c678d
mpich: add v3.4.2 (#24002) 2021-05-28 12:34:29 -06:00
Desmond Orton
f8223303bb
New Package: py-retry-decorator (#23967) 
* New Package: py-retry-decorator

* pypi link correction

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 18:06:36 +00:00
psakievich
4262de6a32
Add cxxstd to trilinos deps in nalu-wind (#23976) 
Co-authored-by: Philip Sakievich <psakiev@sanida.gov>
 2021-05-28 09:17:52 -07:00
Glenn Johnson
4171ee6650
armadillo: update and allow build with MKL (#23875) 2021-05-28 17:27:15 +02:00
Olivier Cessenat
0054e9bb08
argon2: ensure libraries are installed under lib (#21805) 
Make a standard installation for libs in lib not lib/x86_64-linux-gnu for cmake
 2021-05-28 17:26:15 +02:00
Desmond Orton
e0fa0145e3
freebayes: add v1.3.5, move to MesonPackage (#23772) 2021-05-28 17:07:52 +02:00
Manuela Kuhn
a9197d6e6d
r-boot: add v1.3-28 (#23992) 2021-05-28 14:54:50 +00:00
Adam J. Stewart
2507929308
opencv: add v4.5.2 (#23913) 2021-05-28 16:50:25 +02:00
Seth R. Johnson
a975cad6c6
root: disable afterimage when ~x (#23962) 2021-05-28 10:48:06 -04:00
Manuela Kuhn
27c8aac3b6
r-matrix: add v1.3-3 (#23995) 2021-05-28 14:47:56 +00:00
archxlith
4365ed9205
openfst: add v1.8.1, add "python" variant (#23850) 2021-05-28 16:46:00 +02:00
Manuela Kuhn
fe302893ae
r-lattice: add v0.20-44 (#23994) 2021-05-28 14:39:29 +00:00
Seth R. Johnson
d593aa5048
vecgeom: add v1.1.15 (#23973) 2021-05-28 16:36:32 +02:00
Desmond Orton
ebf6f71355
modeltest-ng: add new package (#23765) 2021-05-28 16:35:18 +02:00
Manuela Kuhn
16d4b1ed32
r-mass: add v7.3-54 (#23996) 2021-05-28 14:34:21 +00:00
Manuela Kuhn
f0eb4ca2d8
r-nlme: add v3.1-152 (#23997) 2021-05-28 14:30:37 +00:00
Manuela Kuhn
e06a3b7d45
r-lme4: add v1.1-27 (#23998) 2021-05-28 14:26:21 +00:00
Manuela Kuhn
c2e1e48fdc
r-pbkrtest: add v0.5.1 (#23999) 2021-05-28 14:21:21 +00:00
Robert Mijakovic
50ea1f8577
singularity: add v3.7.4 (#23954) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-28 15:56:40 +02:00
Martin Aumüller
0c290ef1c3
embree: add v3.13.0, fix build (#23986) 
* embree: allow for compiling with gcc 7.3

strip out unsupported -mprefer-vector-width=256

* embree: fix build on AMD CPUs

The ISAs that embree is compiled for have to match the CPU
features enabled by the compiler, as embree derives theISA
that it compiles for from the latter.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-28 13:50:03 +02:00
Jose E. Roman
1dd6bc2725
SLEPc: add v3.15.1 (#23987) 2021-05-28 13:46:24 +02:00
Brian Van Essen
f1dc49bf42
lbann: add v0.102, add variant to enable address sanitizer. (#23981) 2021-05-28 11:31:24 +02:00
Martin Aumüller
6a9e2eeb83
botan: add v2.17.3, v2.18.0 and v2.18.1 (#23984) 2021-05-28 11:24:15 +02:00
Martin Aumüller
c4063b11fe
ispc: add v1.15.0 (#23985) 2021-05-28 11:23:46 +02:00
plamborn
031ef00a1f
libhio: added version 1.4.1.6 (#23975) 2021-05-28 00:19:12 -06:00
Ben Corbett
429b71bf57
Fix ZFP cuda build. (#23941) 2021-05-27 21:46:19 -06:00
Adam J. Stewart
850cac5ea3
py-cfgrib: add new version (#23916) 2021-05-28 03:14:44 +00:00
Adam J. Stewart
e2399bcd0e
py-geocube: add new package (#23909) 2021-05-27 19:40:54 -05:00
Desmond Orton
b375500134
py-gql: Added version and deps for @0.4.0 (#23927) 
* Added version and deps for @0.4.0

* Switched to pypi, fixed deps

* deprecation removal
 2021-05-28 00:13:27 +00:00
Desmond Orton
b255c698d5
New Package: py-google-apitools (#23968) 
* New Package: py-google-apitools

* proper python constraints

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 00:03:15 +00:00
Desmond Orton
53e4f32a31
New package:py-coveralls (#23930) 
* New package:py-coveralls

* dep fixes

* added python constraint

* pyyaml version constraint

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-27 17:40:13 -06:00
Desmond Orton
e74d10fd78
py-healpy: added missing dep (#23960) 
* py-healpy: added missing dep

* added healpix and pkgconfig
 2021-05-27 23:33:03 +00:00
romerojosh
f31bc986a8
Update nvshmem package to use public URL (#23933) 2021-05-27 23:25:12 +02:00
Adam J. Stewart
ef56462867
Add fuse virtual dependency, new macfuse package (#23904) 2021-05-27 23:21:11 +02:00
Adam J. Stewart
214182529f
wget: add new version, fix macOS build (#23921) 2021-05-27 13:23:17 -07:00
Michael Kuhn
dd0bd179c5
gtkplus: add 3.24.29 (#23896) 
This also fixes the build with %gcc@11:. According to upstream, the
proper solution is to disable -Werror=array-bounds since the stable
branch will not receive a patch for newer compilers.
 2021-05-27 15:17:13 -05:00
Adam J. Stewart
f92b7eca5e
py-eccodes: add new package (#23906) 2021-05-27 13:16:44 -07:00
Adam J. Stewart
cc4029daab
py-datacube: add new package (#23905) 
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-27 13:14:59 -07:00
Adam J. Stewart
4e8d87e5cc
plumed: add missing m4 dependency (#23957) 2021-05-27 14:45:31 -04:00
Sebastian Schmitt
30547f60d1
Update py-pint and fix runtime dependency on setuptools (#23950) 
* Update py-pint and fix runtime dependency on setuptools

Without the runtime dependency on setuptools, importing pint yields:

0.11:

ModuleNotFoundError: No module named 'pkg_resources'

0.17:

ModuleNotFoundError: No module named 'packaging'

* Fix

* Address comments
 2021-05-27 17:44:26 +00:00
Desmond Orton
84ad5e444a
New package: py-promise (#23936) 
* New package: py-promise

* removed test deps, added missing dep
 2021-05-27 17:18:46 +00:00
Tamara Dahlgren
cf15c42c1e
py-hatchet: update v1.3.0 checksum (#23902) 2021-05-27 09:40:34 -07:00
Adam J. Stewart
d990c93cab
py-rasterio: add v1.2.3 (#23945) 2021-05-27 10:28:20 -06:00
Ben Corbett
2b78b04dc5
Chai, LvArray, Umpire and py-scipy: update versions, variants, and or more (#23488) 
* LvArray update.

* Style changes.

* Addressing PR comments.

* Bound scipy clang patch.

* Umpire an CHAI boolean fix.

* Changed lvarray python dependency types.
 2021-05-27 00:23:37 +00:00
Desmond Orton
b120b51605
New package py-rx@3.2.0 (#23929) 
* New package py-rx@3.2.0

* Removal of deps and added python constraint
 2021-05-27 00:13:31 +00:00
Desmond Orton
7473388f25
py-graphql-core: switched url to pypi (#23928) 
* switched url to use pypi

* Python dep constraint fix
 2021-05-27 00:04:00 +00:00
Ben Bergen
c9355ad8a4
Added version 0.11.3 (#23940) 2021-05-26 23:40:42 +00:00
Adam J. Stewart
a40e39f1f4
py-findlibs: add new package (#23908) 2021-05-26 15:04:45 -07:00
Adam J. Stewart
578de4c505
py-rioxarray: add new package (#23910) 2021-05-26 15:00:01 -07:00
Adam J. Stewart
507ce17908
Add clarifying comments for import_modules usage (#23935) 2021-05-26 16:58:40 -05:00
Howard Pritchard
39a3dc4991
ucx: fix sha for 1.10.1 release (#23931) 
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2021-05-26 13:37:37 -07:00
Adam J. Stewart
f1e0053bf4
py-pint: fix import tests (#23918) 2021-05-26 20:27:05 +00:00
Adam J. Stewart
a9e3f21002
py-applicationinsights: fix import tests (#23914) 2021-05-26 20:23:17 +00:00
Adam J. Stewart
6d2d99d1fe
py-azure-identity: fix import tests (#23915) 2021-05-26 20:19:38 +00:00
Adam J. Stewart
db65f458ec
py-distributed: fix import tests (#23917) 2021-05-26 20:13:49 +00:00
Adam J. Stewart
9e03284758
py-prompt-toolkit: fix import tests (#23919) 2021-05-26 14:10:20 -06:00
Adam J. Stewart
2421e489e4
py-sqlalchemy: fix import tests (#23920) 2021-05-26 20:02:33 +00:00
lukebroskop
f3e3e5514d
CrayPE update for libunwind (#23821) 2021-05-26 20:10:51 +02:00
Harmen Stoppels
b75ad9f950
mbedtls: make perl a test dependency (#23897) 2021-05-26 09:15:09 +02:00
Vicente Bolea
051bcef697
Adds vtk-m release 1.6.0-rc2 (#23895) 2021-05-25 18:01:17 -07:00
Davide Mancusi
de27e6cbdd
root: add CLING_CXX_PATH variable to CMake build (#23888) 
Closes issue #23886.
 2021-05-25 19:50:21 -05:00
Richarda Butler
1b6b5e1611
AML: Add submodules to develop and master versions (#23903) 
Co-authored-by: Kayla Richarda Butler <butler59@quartz1916.llnl.gov>
 2021-05-25 17:34:11 -07:00
Adam J. Stewart
dbde984de1
json-c: fix install on macOS (#23912) 2021-05-26 00:05:09 +00:00
Adam J. Stewart
3c587b14ad
bash: add v5.1 and patches (#23911) 2021-05-26 00:00:37 +00:00
Harmen Stoppels
f2ce57bf77
Add xxd for hsa-rocr-dev build script (#23855) 2021-05-25 20:58:30 +00:00
Hervé Yviquel
e22da8df05
extrae package: add variant for cuda and cupti (#23522) 2021-05-25 10:34:28 -07:00
Seth R. Johnson
a284edb852
ForTrilinos: add smoke test (#23664) 2021-05-25 10:10:19 -06:00
Michael Kuhn
29deb399b4
iwyu: link clang resources in the right location (#23885) 
iwyu cannot find clang's headers if they are installed in separate
prefixes, see:
https://github.com/include-what-you-use/include-what-you-use#how-to-install
 2021-05-25 09:01:44 -06:00
eugeneswalker
c9b957b71a
variorum: unpin hwloc dependency (#23742) 2021-05-25 16:57:30 +02:00
Tamara Dahlgren
929d1de3e5
Stand-alone/Smoke tests: copy cached test sources to test stage (#23713) 2021-05-25 07:24:32 -07:00
Harmen Stoppels
56e7e2a406
MesonPackage: make "default_library" a multi-valued variant (#23540) 
Currently if one package does `depends_on('pkg default_library=shared')`
and another does `depends_on('pkg default_library=both')`, you'd get a
concretization error.

With this PR one package can do `depends_on('pkg default_library=shared')` 
and another depends_on('default_library=static'), and it would concretize to 
`pkg default_library=shared,static`

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-25 12:07:00 +02:00
Harmen Stoppels
6d29f0d61f
strace: add v5.8-5.12 (#23883) 2021-05-25 12:02:24 +02:00
Harmen Stoppels
cb13ba0fd8
rpm: overhaul package recipe (#23819) 2021-05-25 11:59:19 +02:00
Olivier Cessenat
7c73a786b3
qucs: add new package (#23849) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-25 09:10:52 +02:00
estewart08
cbd46be21b
[AMD] - Update rocm-openmp-extras to 4.2.0. (#23870) 2021-05-25 08:58:49 +02:00
Chris White
fb2c3cce6d
Add tools and example variants to axom (#23877) 2021-05-25 01:01:58 +00:00
Cyrus Harrison
231490ce9a
ascent package: capture spack global flags in host config (#23826) 2021-05-24 16:50:38 -07:00
Cyrus Harrison
9426b26c22
dray package: capture spack global flags in host config (#23827) 2021-05-24 16:43:02 -07:00
Michael Kuhn
bb13ce308a
iwyu: add 0.15 (#23876) 2021-05-24 23:28:49 +00:00
Chris Richardson
51a0228aed
Fenicsx packages: updates for 0.1.0 releases (#23836) 2021-05-24 15:57:04 -07:00
Desmond Orton
b7bcd31d9b
raxml-ng update to version 1.0.2 (#23764) 
* Package update to version 1.0.2

* switched submodule boolean to string

* switched from string to bools

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-24 13:54:31 -05:00
Seth R. Johnson
d46e49ef7a
SuperLU: add v5.2.2 and cmake tweaks (#23863) 
- Changed to cmake package with backward compatibility with older
  makefile
- Removed unused cmake variable 'blas_blas_libs'
- Added new version 5.2.2 which change to external blas variable
- Remove unused tcsh dependency
- Change URL to use git repository for current and future versions
- Add older 4.2 version
- Add conflict for older versions with apple-clang
 2021-05-24 13:04:21 +02:00
Andreas Baumbach
b7d0b3ea75
gdk-pixbuf: restrict patch application to meson packages (#23838) 2021-05-24 09:36:12 +02:00
Andreas Baumbach
4153c2e319
libedit: add missing pkgconfig dependency (#23839) 2021-05-24 09:35:24 +02:00
Andreas Baumbach
7f56394af9
ncdu: add v1.15.1 (#23840) 2021-05-24 09:34:45 +02:00
Valentin Volkl
b6416376db
alpaka: add new package (#23576) 2021-05-24 09:28:49 +02:00
Hang Yan
e952aa890e
chapel: add versions up to 1.24.1 (#23365) 2021-05-24 09:27:42 +02:00
Robert Mijakovic
9a185b1d0b
ucx: add v1.10.1 (#23858) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-24 09:16:08 +02:00
Filippo Spiga
b793422e12
CUDA: add v11.3.1 (#23864) 2021-05-24 08:48:44 +02:00
Valentin Volkl
27e9f02d32
chaplin: add new package (#23866) 2021-05-24 08:47:52 +02:00
Vanessasaurus
ec00d68ba1
updating debugedit to be built from its production repository (#23851) 
Signed-off-by: vsoch <vsoch@users.noreply.github.com>

Co-authored-by: vsoch <vsoch@users.noreply.github.com>
 2021-05-22 21:27:32 -07:00
Drew Whitehouse
0fd94d4486
new package for openvdb (#23581) 2021-05-22 23:05:10 +02:00
Olivier Cessenat
fb156ae4bc
New package: sparskit (#23848) 2021-05-22 16:25:28 -04:00
Valentin Volkl
4e6a6e4f27
py-kubernetes: add new package (#23843) 
* py-kubernetes: add new package

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-kubernetes: remove alpha/beta versions, fix dependency types

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-22 18:41:58 +00:00
Glenn Johnson
1000deb5f9
Update abinit package (#23670) 
This PR updates the abinit package. The underlying build system has
several changes from previous versions, which are reflected in the
package recipe.

- added version 9.4.2
- removed commented out code
- add new libxml2 variant, with dependency and conflicts
- add dependency on atompaw
- depend on fftw-api when ~openmp
  This allows other fftw implementations to be used. This PR adds MKL.
- depend on netcdf explicitly
- remove hdf5 variant as hdf5 is required
- only use wannier90 if +mpi as the wannier90 spack package is MPI only
- allow newer versions of libxc for abinit 9
- split configure options for versions before and after abinit 9
- always use MPI compiler wrappers
- add patch to remove march settings for version 9
- Set conflict for fftw~openmp if abinit+openmp
  This allows the virtual fftw-api to be used for the dependency. If fftw
  is the fftw-api provider then bail if fftw~openmp is set when
  abinit+openmp is used.
- Set conflicts for +openmp and mkl
- Be explicit about +mkl for intel-parallel-studio
- Add TODO entry for switching conflicts/depends_on logic
 2021-05-22 15:35:58 +02:00
Richarda Butler
cd61b2352d
Slepc: Add E4S testsuite smoke test (#21600) 2021-05-21 15:07:21 -07:00
Dan Bonachea
21fd449a03
upcxx: Install the example files (#23832) 
This installs the example source files into $prefix/example, for use by the E4S Testsuite and other end users.

Also fixes a harmless copy/paste error.
 2021-05-21 11:51:46 -07:00
Mansour Moufid
f8c2e1fc97
libffi: set target triplet to aarch64-apple-darwin on Mac M1. (#23750) 2021-05-21 19:17:58 +02:00
Sebastian Schmitt
6b1849b663
Update pylint to 2.8.2 (#23446) 
* Update pylint to 2.8.2

* Update var/spack/repos/builtin/packages/py-pylint/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Address comments

* Update

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-21 12:13:33 -05:00
Andreas Baumbach
4d9607857b
py-notebook: add older versions (#23720) 
Change-Id: I34d1e14c071f91d9a451740abcbcc31701a47830
 2021-05-21 16:36:00 +00:00
Andreas Baumbach
38fe1c55b5
py-lazy-object-proxy: add missing py-setuptools-scm dependency (#23842) 
Change-Id: I76392841a9973aa7b5ec347b0405a78635989a79
 2021-05-21 11:23:16 -05:00
Andreas Baumbach
d25026677d
New package: py-pybind11-stubgen (#23732) 
* New package: py-pybind11-stubgen

Change-Id: I865b92e08ecefa6eb1327ee0166544fd4ae22953

* fixup

Change-Id: I6030cebecce229d02ab1a20fe6fa501eec22b804
 2021-05-21 11:17:12 -05:00
Anton Kozhevnikov
a586fa6dd3
sirius: update to the latest version (#23835) 2021-05-21 15:04:35 +00:00
iarspider
9c179c7d0b
Add new versions of giflib (#23588) 
giflib 5.20+ no longer uses autotools

Co-authored-by: Ivan Razumov <ivan.razumov@cern.ch>
 2021-05-21 07:19:22 -06:00
Hang Yan
e42b27de7e
thrust: update repo and add new versions (#23364) 2021-05-21 09:50:33 +02:00
Hang Yan
586c08fb86
cub: update repo and add new versions (#23363) 2021-05-21 09:49:37 +02:00
Glenn Johnson
71b9e67b3c
Modification to R environment (#23623) 
* Modification to R environment

This PR modifies how the R environmnet is presented, and fixes
installing the standalone Rmath library.

- The Rmath build and install methods are combined into one
- Set parallel=False when installing Rmath
- remove the run environment that set up variables for libraries and
  headers that are not really needed, and pollute the environment.

* Add setup_run_environment back

- Add back the setup_run_environment with LD_LIBRARY_PATH and
  PKG_CONFIG_PATH.
- Adjust documentation to reflect the current code.
 2021-05-21 09:34:15 +02:00
Olivier Cessenat
3dfb61116d
openblas: update Intel patch directive (#23786) 2021-05-21 09:32:40 +02:00
Olivier Cessenat
5e782f6a23
gsl: update external-cblas patch directive (#23787) 2021-05-21 09:31:31 +02:00
Adam J. Stewart
2d69f63a9c
ghostscript: add tesseract variant (#23794) 2021-05-21 09:22:03 +02:00
Cameron Rutherford
63ea0c8865
exago: enforcing PETSc version < 3.15 (#23774) 2021-05-21 09:20:58 +02:00
Adam J. Stewart
72b6014861
tk: add new version, add macOS patch (#23825) 2021-05-21 09:04:50 +02:00
arjun-raj-kuppala
b8fc1094ff
rdc: add v4.2.0 (#23829) 2021-05-21 08:57:40 +02:00
Dan Bonachea
1242f10d11
Update the GASNet package (#23796) 
The previous `gasnet` spack package was not vetted/approved by the GASNet library maintainers. This one is.

Notably adds build-time testing and smoke-testing.

Convert network variants into a multi-valued `conduits` variant has the minor advantage of enabling a concise `conduits=none` spec, but the major drawback that it degrades the `spack info gasnet` output.
 2021-05-20 23:19:21 -07:00
Glenn Johnson
6e378102fd
New package: py-reindent (#23828) 2021-05-20 21:27:59 -05:00
Seth R. Johnson
d2178fb47b
swig: add smoke tests (#23662) 2021-05-20 17:00:20 -07:00
Olivier Cessenat
3f184b5874
New Package: visit-silo (#22907) 
* New Package: visit-silo
* New Package: visit-$n as an extension to VisIt
* New Package: visit-$n only as an extension to VisIt
 2021-05-20 15:20:49 -07:00
Olivier Cessenat
12dbae3b45
New Package: visit-cgns (#22905) 
* New Package: visit-cgns
* visit-cgns: extends visit and modifies VISIT_PLUGIN_DIR with a trick
 2021-05-20 15:20:19 -07:00
Ben Darwin
fcb8942c88
minc-toolkit: new package (#23818) 2021-05-20 21:36:06 +00:00
Cyrus Harrison
30991cd9cd
add ascent 0.7.1 release (#23823) 2021-05-20 14:15:10 -07:00
Cyrus Harrison
1d10245fd4
dray package: add version 0.1.6 (#23792) 2021-05-20 12:04:05 -07:00
Adam J. Stewart
ea5b5a6d3f
py-torch: add patch to build on systems with glibc<2.12 (#23806) 2021-05-20 20:16:50 +02:00
Olivier Cessenat
f66f7faee1
opencascade: add v7.4.0p2 and v7.5.2 (#23807) 2021-05-20 20:16:29 +02:00
Ben Darwin
ef12b0cb8f
ants: add v2.3.5 (#23752) 2021-05-20 17:01:21 +00:00
Valentin Volkl
7c8b5a4e3a
py-awkward: add version 1.2.3 (#23808) 
* dlpack: add tagged versions

* py-pybind11: add missing test dependency

* py-awkward: add version 1.2.3
 2021-05-20 10:28:57 -06:00
Andreas Baumbach
2716791c7d
py-lazyarray: add new version 0.3.2 (#23700) 
* py-lazyarray: add new version 0.3.2

Change-Id: Ie8a40f3ff1fe7477e27f6085b9ad6673395258b2

* fixup dependencies

Change-Id: I4b2fb7a0abb462f8df74c383c67517065cd95b67

* Update var/spack/repos/builtin/packages/py-lazyarray/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-20 11:28:23 -05:00
Harmen Stoppels
3368e06bc6
gnupg: create a gpg2 symlink on install (#23789) 2021-05-20 18:28:13 +02:00
Andreas Baumbach
ed4de5a688
py-py-cpuinfo: add v6.0.0 and v8.0.0 (#23721) 2021-05-20 17:59:33 +02:00
Chris White
7055846ca1
Axom: Small updates and a new version (#23803) 
* Tweak SCR variant, Add 0.5.0, Move flag to flag handler, Add new conduit/axom conflict

* flake
 2021-05-20 08:26:33 -07:00
Andreas Baumbach
cf20ee0893
vim: add new version (#23730) 2021-05-20 15:08:53 +00:00
arjun-raj-kuppala
6d42be5739
AMD ROCm 4.2.0: Bump up rocm recipes part 2 (#23779) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-05-20 10:58:55 +00:00
Sreenivasa Murthy Kolam
b57b473e51
bump up version for rocm-4.2.0 release (#23795) 2021-05-20 04:55:16 -06:00
Sreenivasa Murthy Kolam
fec9e5c7bd
bump up the version for rocm-4.2.0 release (#23778) 2021-05-20 12:49:40 +02:00
Olivier Cessenat
bd47eaf0f8 visit: make it extendable for plugins 2021-05-20 00:16:03 -07:00
Jon Rood
6f75c6f3fa
findutils: use homebrew trick to build findutils 4.8.0 with apple-clang (#23801) 
* Use homebrew trick to build findutils 4.8.0 with apple-clang.

* Simplify.
 2021-05-19 21:58:07 -05:00
Andreas Baumbach
d2e22d7fe4
py-pluggy: add versions 0.9.0 and 0.8.1 (#23719) 2021-05-19 15:15:13 -07:00
yellowhat
9784b1b0e9
fio: add 3.26 (#23788) 2021-05-19 16:07:17 -06:00
Andreas Baumbach
a3be77d02e
py-mako: add version 1.1.4 (#23718) 2021-05-19 14:37:15 -07:00
Cyrus Harrison
7febe23ebc
add vtk-h 0.7.1 release (#23791) 2021-05-19 14:05:24 -07:00
Cyrus Harrison
32b9bea06a
add conduit 0.7.2 release (#23797) 2021-05-19 14:04:29 -07:00
plamborn
d17783ff70
libhio: add 1.4.15 (#23708) 
adding checksum for new 1.4.1.5 version of libhio
 2021-05-19 14:37:17 -06:00
Tamara Dahlgren
8c64a1cda6
umpire: preliminary stand-alone test simplification (#23627) 2021-05-19 13:28:30 -07:00
Andreas Baumbach
0a7a23068a
py-setuptools: add older version 41.3.0 (#23725) 
Change-Id: I0416a66b523472151d73433a12d38a5b2b225c69
 2021-05-19 20:06:43 +00:00
Desmond Orton
e718a871f3
Updated Archives links for 3.X (#23763) 2021-05-19 14:24:57 -05:00
Desmond Orton
a0af8c9c65
libdeflate: new package (#23762) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-19 21:21:45 +02:00
Andreas Baumbach
944be7a568
py-checkm-genome: fix backportsdependency (#23690) 2021-05-19 12:21:10 -07:00
Andreas Baumbach
e7b11c3098
cquery package: patch for gcc@10: (#23679) 2021-05-19 12:15:02 -07:00
Andreas Baumbach
f3c3fc7493
new package: py-batchspawner (#23688) 
* new package: py-batchspawner

Change-Id: I508bad7ba7f1fc32c2f6c0bfccf35d864cf47ced

* fixup

Change-Id: If183933ce40a8d12214ea24acc683cb046fcfbcb

* fix broken version

Change-Id: Ie4dd8d18465877cd8f9cb862112af37d85b1c30f

* fixup license

Change-Id: I51d92a6d229f6a6b56eea6e53c65ed31fe59f6af

* Update var/spack/repos/builtin/packages/py-batchspawner/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-19 14:12:53 -05:00
Andreas Baumbach
142c85fe22
py-git-review add version 1.27.0 (#23693) 
* py-git-review add version 1.27.0

Change-Id: Ibf2c52009b8d218561a385a592a3fa1266305212

* fixup dependencies and add version 2:

Change-Id: I94e974158afba61d102b04a78634cc276881783c

* fixup

Change-Id: I05d8aab0ddb8c7bc18460ba2da1372cd282a4353
 2021-05-19 14:08:17 -05:00
Andreas Baumbach
6d5cd24480
py-neo: add version 0.8.0 (#23717) 2021-05-19 11:58:42 -07:00
Andreas Baumbach
c666df5665
imagemagick: add missing pkg-config dependency (#23683) 2021-05-19 10:38:25 -07:00
Hadrien G
608d453c01
acts: add v8.2 and support master -> main branch naming switch (#23751) 2021-05-19 16:28:31 +00:00
Robert Mijakovic
9e3cb78fb1
singularity: add v3.7.3 (#23782) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-19 10:19:22 -06:00
Andreas Baumbach
46a1e0613e
py-pytest: add v4.4.0 (#23723) 2021-05-19 14:13:34 +00:00
Andreas Baumbach
8cef30a181
py-regex: add older versions (#23724) 2021-05-19 14:08:34 +00:00
Andreas Baumbach
9759c7162e
py-setuptools-scm: add v3.5.0 (#23726) 2021-05-19 14:01:41 +00:00
Andreas Baumbach
747e3cad1c
scala: add v2.12.6 (#23731) 2021-05-19 07:58:22 -06:00
Andreas Baumbach
51e55381b9
py-slurm-pipeline: add v3.0.2 (#23727) 2021-05-19 13:53:13 +00:00
Andreas Baumbach
9b493e75a2
py-yapf: add v0.29.0 (#23729) 
Change-Id: I2c24cbeeee0be0088dfa60bd83628a0f05272d1c
 2021-05-19 13:48:52 +00:00
Robert Mijakovic
fbc20e0fe8
gdb: new version, 10.2 (#23754) 
* gdb: new version, 10.2

* gdb: applies patch to the newer releases

Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-19 15:37:08 +02:00
G-Ragghianti
f5c7ab7f6c
slate: add v2021.05.02 (#23784) 2021-05-19 15:28:40 +02:00
Harmen Stoppels
81d583e307
sirius: add v7.2.3 (#23785) 2021-05-19 15:26:36 +02:00
Andreas Baumbach
f9aa929082
verilator: add v4.108 and v4.020 (#23736) 2021-05-19 12:37:40 +00:00
Valentin Volkl
46a9dd1889
py-qtconsole: fix misnamed variant (#23746) 2021-05-19 12:15:04 +00:00
Seth R. Johnson
3d2cd48048
Use define_from_variant in numerous CMakePackages (#23655) 
Example replacement:
```
'-D(\w+)(:BOOL)?=\{0\}'\.\s*format\s*\(\s*'(ON|YES|true|TRUE)' if '\+(\w+)' in (self\.)?spec else '(OFF|NO|false|FALSE)'\)
```
with
```
self.define_from_variant('\1', '\4')
```

This will cause failures if any variants were misspelled: I have already caught two packages with nonexistent variants.
 2021-05-19 06:59:06 -04:00
albestro
33df3990de
conflict for apple-clang building findutils (#23740) 2021-05-19 09:19:58 +00:00
Robert Mijakovic
2894c24125
r: add v4.1.0 (#23757) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-19 10:00:52 +02:00
Massimiliano Culpo
8146c0d848
gawk: add support for external find (#23716) 2021-05-19 09:33:28 +02:00
Paul
ccbd1f1d79
Go: add v1.16.4 and v1.15.12 (#23745) 2021-05-19 09:26:19 +02:00
Brian Van Essen
932e916c59
RDKit: new package (#23761) 
RDKit is a collection of cheminformatics and 
machine-learning software written in C++ and
Python.
 2021-05-19 09:25:40 +02:00
David Hughes
1a8d18a2d3
mpich: Apply fallow-argument-mismatch parameter with clang (#23748) 2021-05-19 06:46:51 +00:00
Adam J. Stewart
f407539abb
py-pygeos: add v0.10 (#23781) 2021-05-19 06:19:17 +00:00
Valentin Volkl
2e58d09303
py-qtpy: recipe bugfix (#23747) 2021-05-19 07:34:59 +02:00
Massimiliano Culpo
1a5924f5fb
gnupg: bumped versions, added maintainer (#23734) 2021-05-19 05:17:42 +00:00
Andreas Baumbach
77f155fec4
py-jinja2: add version 2.11.3 (#23698) 
* py-jinja2: add version 2.11.3

Change-Id: If845ff512bafed4d911b03463cae2154357ae5c3

* fixup

Change-Id: Ie39a8b7225826547fcbdb68cb083311a191903ef
 2021-05-19 04:57:23 +00:00
wspear
b21a4f5c89
TAU needs to specify pdt_c++ if built with intel. (#23775) 2021-05-19 02:08:14 +00:00
Dan Bonachea
ce7516f25f
upcxx: Add support for stand-alone post-install tests (#23714) 
This uses the existing script which is always installed for this purpose in modern versions.
 2021-05-18 17:40:51 -07:00
Michael Kuhn
f0d5d992e6
lmdb package: Fix build with other compilers (#23704) 
lmdb hardcodes gcc in its Makefile, so override it.
 2021-05-18 17:18:48 -07:00
Robert Mijakovic
79d8691dde
mercurial: add version 5.8 (#23756) 2021-05-18 17:02:48 -07:00
Robert Mijakovic
18edf0f072
emacs: add version 27.2 (#23753) 2021-05-18 17:01:29 -07:00
Andreas Baumbach
60a6281c47
py-werkzeug: add versions including 0.15.6 (#23728) 2021-05-18 17:00:44 -07:00
Frédéric Simonis
6bf6567f9d
precice: Add version 2.2.1 (#23743) 2021-05-18 16:37:40 -07:00
Robert Mijakovic
ba68cbc694
julia: new version, 1.6.1 (#23755) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-18 23:03:51 +02:00
Harmen Stoppels
4f6b4dcaac
New package: ca-certificates-mozilla (#23632) 2021-05-18 12:50:45 -07:00
Andreas Baumbach
346e52de38
cppcheck: add versions including 2.0 and 1.88 (#23678) 2021-05-18 11:23:22 -07:00
Andreas Baumbach
b41ee03475
doxygen: fix build with gcc@10: for version 1.8.15 (#23680) 2021-05-18 11:21:54 -07:00
Desmond Orton
c22a5326d8
trinity: Version Update to 2.12.0 (#23430) 
Added version requirements for deps
Changed url to get proper versions
 2021-05-18 11:12:33 -07:00
Andreas Baumbach
13cb8ef2c2
fontconfig: add version 2.13.93 (#23681) 2021-05-18 11:03:40 -07:00
Justin M Wozniak
99cd09b2b2
Swift/T Release 1.5.0 (#23702) 
Add versions to adlbx (1.0.0), exmcutils (0.6.0), stc (0.9.0),
and turbine (1.3.0).
 2021-05-18 11:02:31 -07:00
Jim Galarowicz
977dad4c93
openspeedshop and cbtf packages: new versions and dependency updates (#23254) 
* Add versions 1.9.4 and 1.9.4.1 for cbtf-* packages
* Add versions 2.4.2 and 2.4.2.1 for openspeedshop packages
* Remove older versions
* Switch from generic dependency on elf to a dependency on the
  elfutils implementation for cbtf-* and openspeedshop packages
* For llvm-openmp-ompt, relax dependency on libelf to elf (cbtf-krell
  now depends on elfutils, and llvm-openmp-ompt, so unless this
  dependency is relaxed there would be a conflict)
* Update CMake build_type to support Debug, Release, RelWithDebInfo
  in cbtf-* and openspeedshop packages
* Update libmonitor patches when building as a dependency of
  cbtf-krell
 2021-05-18 09:40:01 -07:00
arjun-raj-kuppala
319f20d94f
AMD ROCm release 4.2: core components part-1 (#23613) 2021-05-18 15:53:53 +02:00
Andreas Baumbach
20a99f4f04
git add older versions (#23682) 2021-05-18 10:50:55 +02:00
Harmen Stoppels
e3c59264d8
cray: fix builds on Alps/Eiger (CSCS) (#23470) 
Co-authored-by: Tiziano Müller <tiziano.mueller@chem.uzh.ch>
 2021-05-18 02:25:14 -06:00
eugeneswalker
4cd53cadb0
binutils: fix NameError from commit de8027 (#23715) 2021-05-18 09:03:08 +02:00
Andreas Baumbach
f1c849ca0f
py-alembic: add new version 1.5.5 (#23686) 
* py-alembic: add new version 1.5.5

Change-Id: I80f57c1f29a689bfa1718dd3500ccda6623acf76

* fixup

Change-Id: I551888c25ca7bc0b738c40d63d12974510b59ecf
 2021-05-18 03:24:44 +00:00
Ross Miller
8f85d3b937
Fix minor build issue with UnifyFS. (#23709) 
This commit updates the UnifyFS package.py script to include a patch
that fixes the build problems on new-ish Linux distributions.

Fixes issue #23292
 2021-05-17 19:04:44 -04:00
Andreas Baumbach
0174936250
py-gitpython: add version 0.3.6 (#23695) 
Change-Id: I3424409f8a7575c6a13592c05e1e940f960fe8fe
 2021-05-17 13:07:18 -06:00
Jen Herting
193699f3c9
New package: r-assertive (#23637) 2021-05-17 12:04:15 -06:00
Andreas Baumbach
58751ac2e8
py-jsonpickle: restrict importlib dependency to appropriate python (#23699) 
Change-Id: I538d72eb97d3cc91e2e6854b40c5b91b39df6f62
 2021-05-17 12:47:20 -05:00
Andreas Baumbach
401f61c094
py-jedi: add older versions (#23697) 
Change-Id: I56de34bace2fb04156700ffd4f1b34408920d702
 2021-05-17 12:44:53 -05:00
Andreas Baumbach
84486be643
py-grpcio: add version 1.16.0 (#23696) 
Change-Id: I4acb232e171ddec688eb7871da80caaa05bf637b
 2021-05-17 12:44:20 -05:00
Andreas Baumbach
d577f25dcf
py-google-pasta: add older versions (#23694) 
Change-Id: I5846415b4953a5f12f995672e586cadb80857db2
 2021-05-17 12:42:42 -05:00
Andreas Baumbach
b2bc0241eb
py-astroid: add new versions and update dependencies (#23687) 
Change-Id: I2c07e75b404ec289feebdbfb09f6b0e733404911
 2021-05-17 12:31:34 -05:00
lukebroskop
dd350e83d3
CrayPE fix for axom (#23520) 
Pass -ef to the cce fortran compiler, fix the build system to use the correct openmp flag for CCE

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-17 11:22:16 -06:00
Andreas Baumbach
9d251e51a1
py-bottleneck: add new versions (#23689) 
Change-Id: I31a22fa1495cc2ceed33ba7084831c11120c03e7
 2021-05-17 11:04:24 -06:00
Vicente Bolea
e56aa15d22
ParaView: add new release v5.9.1 (#23657) 2021-05-17 12:51:56 -04:00
lukebroskop
46e0869631
CrayPE fixes for the slepc package (#23503) 
Use the gold linker for CCE (this may change later)

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-17 09:30:58 -07:00
Daniel Arndt
e34d996944
ArborX: Avoid calling mkdirp directly (#23691) 2021-05-17 18:28:55 +02:00
Andreas Baumbach
8ee8269ede
py-coverage: add version and restrict newer python dependency (#23692) 
Change-Id: I7e790014fd448eb203a1963c90e22afde041ba50
 2021-05-17 11:28:29 -05:00
lukebroskop
de8027a820
CrayPE fix for binutils (#23500) 
Allow for multiple definitions at link time (for CrayPE)

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-05-17 09:26:15 -07:00
lukebroskop
b462ccb565
CrayPE fix for trilinos (#23518) 
Expand the use of cray_secas.patch and use the gold linker w/cce

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-17 09:23:24 -07:00
lukebroskop
87466df80f
craype fixes for scr (#23510) 
turn off static linking, add -ldl flag

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-17 09:14:08 -07:00
Michael Kuhn
213ef656c5
libfuse: add 3.10.3 (#23676) 
This also adds a patch to make libfuse compile with gcc@11:
 2021-05-17 13:28:57 +00:00
Bryan Herman
c7f269e2f9
trilinos: add scorec variant (#23117) 
* add scorec feature to trilinos recipe
* used func to enable SCOREC
 2021-05-17 07:26:59 -04:00
Harmen Stoppels
5157f4be7f
ccache: add v4.3 (#23671) 2021-05-17 13:21:55 +02:00
Enrico Usai
5c3b761102
aws-parallelcluster: add v2.10.4 (#23672) 2021-05-17 13:02:36 +02:00
Robert Mijakovic
f0d48439c3
c-blosc2: new version, v2.0.0rc1 (#23560) 2021-05-17 12:12:27 +02:00
darmac
a24620bb65
bib2xhtml: add dependency to run bibtex (#22742) 2021-05-17 11:42:00 +02:00
Mark Olesen
defb487ed9
openfoam: update to OpenFOAM-v2012_210414 (patch release) (#23249) 2021-05-17 11:32:18 +02:00
Michael Kuhn
1b7e846434
gcc: add 8.5.0 (#23647) 2021-05-17 11:04:11 +02:00
Michael Kuhn
147d44450d
libuv: add 1.41.0 (#23648) 2021-05-17 11:03:40 +02:00
Michael Kuhn
719d8f5142
netdata: add 1.30.1 (#23650) 
This also changes the checksum for 1.22.1 because I switched the package
to use the proper upstream tarballs to get rid of the autotools
dependencies. Moreover, a few dependencies were missing. netdata also
requires a few directories to be created in its prefix to actually work.
 2021-05-17 11:03:24 +02:00
Glenn Johnson
58c2997b84
Add version 4.1.1.0 to atompaw (#23659) 
Also adjust the libxc constraints.
 2021-05-17 10:22:45 +02:00
Massimiliano Culpo
18b436bbb0
minisign: permit to build statically, add maintainer (#23653) 2021-05-17 10:18:43 +02:00
eugeneswalker
d4cfde2f3e
geopm: py-tables build+run dep: allow versions past 3.5.2 (#23666) 2021-05-16 13:36:19 -04:00
Francesco Di Natale
2a7fa295fb
Addition of py-pyaestro package. (#23629) 2021-05-15 10:08:44 -05:00
Jen Herting
ef4215360c
New package: py-pygetwindow (#23635) 
* [py-pygetwindow] created template

* [py-pygetwindow] added dependencies

* [py-pygetwindow] Final cleanup

- added homepage
- added description
- removed fixmes
 2021-05-15 02:33:23 +00:00
Jen Herting
42a77a1ff6
New package: py-pyrect (#23634) 
* [py-pyrect] created template

* [py-pyrect] depends on setuptools

* [py-pyrect] Final cleanup

- added homepage
- added description
- removed fixmes
 2021-05-14 21:06:23 -05:00
Jen Herting
8914085789
New package: py-word2number (#23638) 
* [py-word2number] created template

* [py-word2number] requires setuptools

* [py-word2number] Final cleanup

- added homepage
- added long description
- removed fixmes
 2021-05-14 21:03:56 -05:00
Jen Herting
bd389b0f95
New package: py-pymsgbox (#23639) 
* [py-pymsgbox] created template

* [py-pymsgbox] depends on setuptools

* [py-pymsgbox] Final cleanup

- added homepage
- added description
- removed fixmes
 2021-05-14 21:03:08 -05:00
Jen Herting
8813ce36b3
New package: py-pytweening (#23641) 
* [py-pytweening] created template

* [py-pytweening] depends on setuptools

* [py-pytweening] final cleanup

- added homepage
- added description
- removed fixmes
 2021-05-14 21:02:20 -05:00
Michael Kuhn
a66bca591c
zstd: add 1.5.0 (#23646) 2021-05-14 22:42:09 +00:00
Harmen Stoppels
d80b008789
Bump coreutils (#23633) 2021-05-15 00:15:33 +02:00
iarspider
fc392d2f56
root: Add variants: dcache and oracle (#23441) 2021-05-14 21:08:35 +02:00
Michael Kuhn
59a520246b
emacs: add texinfo build dependency on master (#23631) 
It seems that building unreleased versions requires makeinfo, which is
part of texinfo.
 2021-05-14 10:07:19 +02:00
Adam J. Stewart
14fc5604dd
py-rarfile: add new package (#23622) 2021-05-14 10:06:39 +02:00
Pat McCormick
d64fd1238b
legion: bug fix for flecsi use cases. (#23624) 2021-05-14 10:03:52 +02:00
Massimiliano Culpo
9e30e669d2
build tests: put an upper bound on the version of GCC being used (#23630) 2021-05-14 07:51:03 +00:00
Jacob Merson
117dfcae25
model-traits: add new package (#23589) 2021-05-14 07:45:04 +00:00
miheer vaidya
702f343fb1
emacs: add support for native compilation on master (#23493) 
* Emacs native compilation on master

* emacs: Mark tools correctly as build dependency
 2021-05-14 09:33:32 +02:00
natshineman
0d92c39d47
Update mvapich2 to 2.3.6 (#23574) 
Co-authored-by: Nat Shineman <shineman.5@buckeyemail.osu.edu>
 2021-05-14 09:32:21 +02:00
sebrowne
19c7188cbf
netcdf-c: refactor fsync variant (#23477) 
Simplify logic by just enabling or disabling fsync as user specified
(default to off currently).  Also remove the 4.1 version check, since
that version isn't actually supported in here.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-14 08:59:43 +02:00
eugeneswalker
b91f24fa8a
py-warpx: new version: 21.05 (#23628) 2021-05-14 02:35:14 +00:00
eugeneswalker
cce59095bf
veloc: add v1.3 and v1.2 (#23626) 2021-05-13 18:32:13 -07:00
Axel Huebl
34ec69d140
openPMD-api: 0.13.4 (#23619) 
Add the latest release.
 2021-05-13 18:22:22 -07:00
Jon Rood
0cc42acbbd
Add -DSTK_NO_BOOST_STACKTRACE to compile line in trilinos if +stk and on a Mac. (#23625) 2021-05-13 18:21:40 -07:00
Sreenivasa Murthy Kolam
8b25bdcf4d
Enable image_support flag to fix the issues with hipMalloc3D,hipMallocPitch() (#23620) 2021-05-14 00:37:55 +02:00
Greg Sjaardema
98cf0f5e07
seacas: new version, update dependency versions (#23609) 
Add new release of SEACAS.

Update netcdf-c version to recent release which fixes some issues that have caused problems in past

Use release version of CGNS instead of develop
 2021-05-13 16:48:04 +02:00
Ben Boeckel
9ed1208650
libcatalyst: add package (#23595) 
There are no official releases yet, so just use a git snapshot for now.
 2021-05-13 16:47:18 +02:00
Davide Mancusi
98d1d40e46
libbsd: do not apply local-elf.h.patch after version 0.10 (#23565) 2021-05-13 11:58:45 +00:00
Adam J. Stewart
91b58112f1
py-cocotools: add new package (#23573) 2021-05-13 13:18:18 +02:00
Davide Mancusi
9a71bd3893
python: use CFLAGS=-fp-model=strict with %oneapi (#23575) 2021-05-13 11:04:21 +00:00
Sreenivasa Murthy Kolam
a4f03dba9c
update the version for rocm packages comgr,hip-rocclr ,... for rocm-4.2.0 release (#23608) 2021-05-13 12:27:20 +02:00
Michael Kuhn
ce0733a4c3
rocksdb: update pkg-config patch (#23601) 
The previous version did not fix an error that only occured with clang.
 2021-05-13 11:38:05 +02:00
Michael Kuhn
d294438c24
glib: add v2.68.2 (#23603) 2021-05-13 11:31:52 +02:00
Michael Kuhn
a88206de03
libbson: add v1.17.5 (#23604) 2021-05-13 11:31:36 +02:00
Michael Kuhn
4bc043da85
mongo-c-driver: add v1.17.5 (#23605) 2021-05-13 11:31:17 +02:00
Michael Kuhn
2df7947f02
lmdb: add v0.9.29 (#23606) 2021-05-13 11:31:02 +02:00
Michael Kuhn
52145be122
mariadb-c-client: add v3.1.13 (#23607) 2021-05-13 11:30:46 +02:00
Jon Rood
97e6c0fda4
nalu-wind: remove SuperLU dependency from Trilinos and simplify recipe (#23600) 
* Update Nalu-Wind to remove SuperLU from Trilinos requirement. Also simplify Nalu-Wind package.

* Leave boost option in nalu-wind.

* Add git branches into TPL requirements. Update OpenFAST for change to main branch.
 2021-05-13 11:18:43 +02:00
G-Ragghianti
8a40a3a70f
slate: add v2021.05.01 (#23612) 
Adds a new release version for SLATE and includes 
HIP/ROCm backend support. Now can build with either 
CUDA or ROCm support.
 2021-05-13 10:32:31 +02:00
Desmond Orton
ee73f75239
New Package r-dexseq (#23457) 2021-05-12 19:56:56 -05:00
wspear
c2577275f5
tau: depend on provider of elf (#23602) 
* tau: depend on provider of elf

* Depends on elf when +elf, not +libdwarf
 2021-05-13 00:14:33 +00:00
Terry Cojean
735c48c4aa
Update: Ginkgo ROCm setup and smoke tests (#23280) 
Add Ginkgo ROCmPackage support and improve tests.
 2021-05-12 17:04:08 -06:00
Robert Mijakovic
d19d81a3f4
sqlite3: new version, 3.35.5 (#23592) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-12 21:18:53 +02:00
Brian Van Essen
6b7c57ad47
High performance linkers for LBANN (#23594) 
* Added the option to use high performance linkers: gold and lld, for
LBANN.  Including them as build flags causes unnecessary propagation
to all dependent packages, reducing package reuse.
 2021-05-12 12:18:01 -07:00