darmac
8b9f4d53da
solr: add java as runtime dependency ( #20827 )
2021-01-13 09:52:00 +01:00
a-saitoh-fj
5cfa3d5c59
libzmq: add libbsd as a dependency ( #20828 )
...
libzmq started using strlcpy from v4.3.3
2021-01-13 09:48:03 +01:00
Tiziano Müller
5443558717
cp2k: add v8.1 ( #20829 )
2021-01-13 09:39:35 +01:00
Massimiliano Culpo
0bd76ac9e6
concretizer: require at least a dependency type to say the dependency holds
...
fixes #20784
Similarly to the previous bug, here we were deducing
conditions to be imposed on nodes that were not part
of the DAG.
2021-01-12 22:23:39 -08:00
Massimiliano Culpo
ed8fe68cf2
concretizer: dependency conditions cannot hold if package is external
...
fixes #20736
Before this one line fix we were erroneously deducing
that dependency conditions hold even if a package
was external.
This may result in answer sets that contain imposed
conditions on a node without the node being present
in the DAG, hence #20736 .
2021-01-12 22:23:39 -08:00
Robert Blake
a2eb587a95
py-torchvision@0.5.0 depends on py-torch@1.4.1 ( #20811 )
2021-01-12 17:13:43 -06:00
Massimiliano Culpo
b3419c06c5
libyogrt: remove conflicts triggered by an invalid value ( #20794 )
...
fixes #20611
The conflict was triggered by an invalid value of the
'scheduler' variant. This causes Spack to error when libyogrt
facts are validated by the ASP-based concretizer.
2021-01-12 17:11:50 -06:00
archxlith
e10c0a6a34
New package [py-pylops] ( #20777 )
...
* New package [py-pylops]
* [py-pylops] Seperated optional dependecies into a variant called advanced
2021-01-12 12:36:53 -06:00
Harmen Stoppels
1d7babe955
dbcsr, cp2k: fix cuda arch conflicts in asp concretizer ( #20784 )
2021-01-12 18:01:32 +01:00
christopher coffey
ecc59de51d
kraken2: added v2.1.1 ( #20785 )
2021-01-12 10:43:55 +01:00
downloadico
1a45ce132d
hybrid-lambda: added new package ( #20754 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-12 10:42:23 +01:00
ketsubouchi
506da6891a
dsqss: new package at v2.0.3 ( #20723 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-12 10:00:30 +01:00
a-saitoh-fj
c6f13cb20f
py-distributed: added v2020.12.0 ( #20722 )
2021-01-12 09:57:53 +01:00
Harmen Stoppels
a2a0262f79
hip: fix naming of libraries when installing from tarballs ( #20780 )
...
There's two issues with hip where it tries to autodetect the patch
version number from git (when installed), but it does not check if it
even is inside of a git repo. The result is we end up with a shared lib
with a trailing dash in the library suffix: `libamd64.so.x.y.z-`, which
confuses GCC. The patch tries to check if the `.git` folder exists, and
if it does not, it handles version numbering the same as when git was
not installed previously.
2021-01-12 09:48:03 +01:00
archxlith
60a58d89e7
New package [py-scikit-fmm] ( #20775 )
...
* New package [py-scikit-fmm]
* [py-scikit-fmm] Removed redundant depends_on
2021-01-11 16:36:29 -06:00
AMD Toolchain Support
e7ed832c8d
spack recipe for amdlibm ( #20487 )
2021-01-11 12:13:54 -08:00
archxlith
8066ca8a8e
New package [py-spgl1] ( #20776 )
2021-01-11 12:49:36 -06:00
AMD Toolchain Support
de3504ca29
wrf: add AOCC support for v4.2 ( #20772 )
2021-01-11 12:13:59 +01:00
Adam J. Stewart
ec0226ec6e
libquo: add maintainer ( #20583 )
2021-01-11 11:55:53 +01:00
lorddavidiii
a9d6e69789
New versions of opencl-c-headers, opencl-clhpp and ocl-icd ( #20724 )
...
* opencl-c-headers: add new version 2020.12.18
* opencl-clhpp: add new version 2.0.13
* opencl-headers: now supports OpenCL 3.0 with new versions of opencl-c-headers and opencl-clhpp
* ocl-icd: add new version 2.2.14 add now can provide OpenCL 3.0
2021-01-11 11:39:02 +01:00
Erik Schnetter
e9c2bc5d7f
gsl: added v2.6 ( #20726 )
2021-01-11 11:13:44 +01:00
darmac
c199f37e94
ply: added new package ( #20764 )
2021-01-11 10:46:04 +01:00
Erik Schnetter
9049829c8e
asdf-cxx: correct swig dependency details ( #20752 )
2021-01-11 10:29:55 +01:00
Axel Huebl
53b70451fd
openPMD-api: added v0.13.1 ( #20761 )
2021-01-11 09:55:26 +01:00
Aurelien Bouteiller
63eabae0ec
PaRSEC: added new package ( #20170 )
...
PaRSEC: the Parallel Runtime Scheduler and Execution Controller for micro-tasks on distributed heterogeneous systems.
Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
2021-01-11 09:25:26 +01:00
Keita Iwabuchi
9a1ab9a8a3
metall: added v0.8 and v0.9 ( #20763 )
2021-01-11 09:11:09 +01:00
Erik Schnetter
dc0deb3e3d
hwloc: New version 2.4.0 ( #20727 )
...
New versions 1.11.12, 1.11.13, 2.3.0, 2.4.0.
2021-01-10 22:21:26 +01:00
Teodor Nikolov
a190876bdc
COSMA: latest version ( #20760 )
2021-01-10 19:58:30 +01:00
eugeneswalker
d6ba623669
llvm-amdgpu: add variant: openmp (bool) ( #20759 )
2021-01-10 19:57:28 +01:00
Erik Schnetter
5dacb1b550
libjpeg-turbo: added v2.05 and v2.06 ( #20770 )
2021-01-10 10:36:27 +01:00
Erik Schnetter
dc52168feb
libevent: added v2.1.12, v2.1.11 and v2.1.10 ( #20771 )
2021-01-10 10:35:50 +01:00
Andrew W Elble
0c1e99b3c8
py-tensorflow: version updates, add 2.4.0 ( #20702 )
...
* py-tensorflow: 2.4.0 and dependency updates
* minor version updates
* fix numpy dependency
* dependency rework: compatible release issues, start to clarify cuda versions
* --incompatible_no_support_tools_in_action_inputs was removed in bazel 3.6
* adjustment to versions of cuda dependency, also make sure that
patches/filters still apply to certain release trains.
* python 3.8 and tf < 2.2 have issues
* missed py-grpcio version bump
2021-01-09 12:03:49 -06:00
Seth R. Johnson
1e3f6489c4
ForTrilinos: add version 2.0.0 ( #20695 )
...
I finally figured out how to get version 2.0.0 to play nice with the dev
versions. Yuck.
2021-01-08 15:48:23 -05:00
Robert Cohn
ea0b001597
intel-oneapi-mpi: virtual provider support ( #20732 )
...
Set up environment and dependent packages properly when building
with intel-oneapi-mpi as a dependency MPI provider (e.g. point to
mpicc compiler wrapper).
2021-01-08 10:47:03 -08:00
mic84
1d4cbcd93f
amrex: expand CUDA support ( #20740 )
...
* amrex: expand CUDA support
2021-01-08 09:44:59 -08:00
Robert Underwood
2f19346c9a
py-scikit-learn: do parallel builds of C extension ( #20733 )
...
Enabled parallel builds of the C-extension upto the parallelism allowed
by spack.
https://scikit-learn.org/stable/developers/advanced_installation.html#parallel-builds
2021-01-07 14:58:33 -06:00
Jen Herting
b6e32a265b
New package: py-testfixtures ( #20432 )
...
* [py-testfixtures] copied from slpits
* [py-testfixtures] removed extends('python')
* [py-testfixtures] removed unnecessary dependencies
2021-01-07 12:29:33 -06:00
Andrew W Elble
1ada637613
py-six: 1.15.0 ( #20710 )
...
* py-six: 1.15.0
* depend on specific python version(s)
2021-01-06 19:21:39 -06:00
Joshua S Brown
b933454250
Fix dependencies and https address of gitpython ( #20669 )
...
* Fix dependencies and https address of gitpython
* Fix gitpython, use pypi repo, fix checksums
* Use pypi
* Revert to python 3.4 dependency
2021-01-06 19:21:11 -06:00
Gabriel Rockefeller
f1a4ac5c37
eospac: add version 6.4.2beta ( #20681 )
...
* eospac: add version 6.4.2beta
* eospac: clarify EOSPAC "beta" versions
Compared to 6.4.1, EOSPAC 6.4.2beta contains only one change, a fix
for an inability to read some SESAME files in ASCII format. From the
release announcement,
EOSPAC 6.4.2beta has been released for general use as the latest
(i.e., eospac6-latest) versions. This is a small patch to the
previously-released version 6.4.1, which was requested by an
affected user.
But the "beta" label can cause confusion, especially when a beta
version is the new preferred version, as is the case here. As
suggested by reviewers, add a comment clarifying EOSPAC's use of
"beta".
2021-01-06 18:06:17 -06:00
Andrew W Elble
61fc26e197
py-wheel: 0.35.1 ( #20713 )
2021-01-06 16:04:31 -06:00
Andrew W Elble
559c64c365
flatbuffers: python variant ( #20706 )
2021-01-06 15:59:09 -06:00
Andrew W Elble
820840d448
py-wrapt: 1.12.1 ( #20707 )
2021-01-06 15:56:59 -06:00
Andrew W Elble
8e04217672
py-opt-einsum: 3.3.0 ( #20712 )
2021-01-06 15:56:03 -06:00
Andrew W Elble
136753ccd9
py-absl-py: 0.10.0 ( #20709 )
2021-01-06 15:55:48 -06:00
Andrew W Elble
8968123dae
py-google-pasta: 0.2.0 ( #20711 )
2021-01-06 15:53:23 -06:00
Andrew W Elble
0bb495ce6f
nccl: 2.8.3-1 ( #20708 )
2021-01-06 15:47:25 -06:00
Erik Schnetter
682c31d380
qthreads: New version 1.15 ( #20704 )
2021-01-06 13:09:57 -08:00
Robert Maynard
2c04bebc32
Update kokkos amd gpu archs and required C++ level ( #20096 )
...
* Remove unsupported AMD GPU archs
* Kokkos requires C++14 now
2021-01-06 13:08:07 -08:00
Jordan Ogas
e2f2417a31
add charliecloud/0.21 ( #20703 )
2021-01-06 12:13:31 -08:00
Rémi Lacroix
4e12cab9e3
SLEPc: Set SLEPC_DIR in the module file. ( #20698 )
2021-01-06 11:05:35 -08:00
Greg Sjaardema
ac3f8656fb
SEACAS: Update to lastest version ( #20701 )
2021-01-06 10:53:45 -08:00
Frank Willmore
c3fad97487
intel-oneapi-compilers package: correct module file ( #20686 )
...
This properly sets PATH/CPATH/LIBRARY_PATH etc. to make the
Spack-generated module file for intel-oneapi-compilers useful
(without this, 'icx' would not be found after loading the module
file for intel-oneapi-compilers).
2021-01-06 10:45:42 -08:00
Robert Cohn
74a54077f5
fix mpi lib paths, add virtual provides ( #20693 )
2021-01-06 10:37:24 -08:00
Ye Luo
844d98f727
Remove hard-coded standard C++ library selection and add more releases in llvm package ( #19933 )
...
* Restore OS based Clang default choice of C++ standard library.
* Add LLVM 11.0.1 release
2021-01-06 12:17:20 -06:00
Toyohisa Kameyama
587d25ad45
parallelio: New Package. ( #20673 )
2021-01-06 10:05:43 -08:00
Dr. Christian Tacke
dabee2cee8
libc: Return empty libs ( #20338 )
...
The C-Library for the current compiler should already be used by the compiler. So there is no point in returning any libs for this package.
Without this patch: if one uses this as an external package (as intended), then this will can inject system library paths into the build process at the wrong place.
2021-01-06 10:01:07 -08:00
jkelling
8956c8c7b7
magma: remove -W args from CMakeLists.txt when using nvhpc ( #20516 )
2021-01-06 10:51:05 +01:00
Erik Schnetter
8860db4021
arrayfire: added v3.7.3 ( #20612 )
2021-01-06 10:46:02 +01:00
Rémi Lacroix
89b94d968d
libtheora: fetch a patch instead of storing it in Spack ( #20620 )
2021-01-06 10:44:05 +01:00
Rémi Lacroix
d30f9e5806
Blitz: added v1.0.2 ( #20614 )
2021-01-06 10:35:21 +01:00
Josh Essman
1cd4b134cb
mfem: link to nveccuda when +sundials+cuda ( #20588 )
2021-01-06 10:34:42 +01:00
Rémi Lacroix
c2411117f3
r-genefilter: added v1.72. ( #20627 )
2021-01-06 10:23:25 +01:00
Rémi Lacroix
83697161b4
Nek5000: Improve support for OpenMPI without legacy launchers. ( #20622 )
...
Use "srun" for the nekmpi wrapper when we know "mpiexec" won't be available.
2021-01-06 10:20:41 +01:00
Rémi Lacroix
3f40d15c84
Gromacs: simplify hwloc dependency. ( #20619 )
...
Additionaly remove the version constraint as newer versions work with OpenMPI 4.X.Y and the new experimental concretizer is now available for testing.
2021-01-06 10:19:48 +01:00
Adam J. Stewart
5aabd59335
py-scipy: add v1.6.0 ( #20637 )
2021-01-06 10:17:36 +01:00
Adam J. Stewart
4da57e8afa
GDAL: add v3.2.1 ( #20664 )
2021-01-06 10:06:32 +01:00
Tao Lin
05ab114ff9
GenFit: added new package ( #20653 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-06 09:55:49 +01:00
Brian Van Essen
385c503d8e
lbann: make catch2 a "build" and "test" dependency ( #20666 )
2021-01-06 09:53:30 +01:00
Luca Heltai
812a3fb0ae
dealii: fix concretization problem between trilinos and adol-c ( #20606 )
2021-01-06 09:51:21 +01:00
Adam J. Stewart
c247999c65
py-sphinx-rtd-theme: remove npm dependency ( #20675 )
2021-01-06 09:39:06 +01:00
Adam J. Stewart
0a69cf5936
py-numpy: add v1.19.5 ( #20684 )
2021-01-06 09:16:46 +01:00
Adam J. Stewart
323667ce2a
fakexrandr: add new package ( #20687 )
2021-01-06 08:59:12 +01:00
Adam J. Stewart
564aebdb1a
Xorg proto: type build -> link ( #20685 )
2021-01-06 08:56:22 +01:00
Desmond Orton
8d0f5c0a6f
py-picrust2: added new package ( #20455 )
2021-01-06 08:54:36 +01:00
Gregory Lee
7dbc4d32db
update stat and deps with bug fixes ( #20690 )
2021-01-06 08:36:56 +01:00
Sinan
1f2f82d388
libspatialite: added v5.0.0 ( #20293 )
...
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-01-06 08:16:25 +01:00
estewart08
7faa0a9e43
Rocm-openmp-extras 4.0 version updates ( #20692 )
2021-01-05 22:48:54 -06:00
Sreenivasa Murthy Kolam
023cb7ab7f
bump up version for rocm-4.0.0 release ( #20691 )
2021-01-05 22:25:45 -06:00
ketsubouchi
15a7723645
alps: fix for latest gcc and test bug ( #20462 )
...
* gcc build OK
* gcc mc-01 OK
* time test problem
* remove comment and debug
* use climit
* TAB to spaces
* comment
2021-01-05 22:24:50 -06:00
andymwood
35d81a9006
VTK: add -no-ipo for builds using intel compiler ( #20480 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 13:11:29 -08:00
Ethan Stam
18110346c8
Mesa: use auto when llvm is built shared ( #20683 )
2021-01-05 13:04:57 -07:00
estewart08
32c7241089
Updates and Enhancements to AOMP Recipe. Added version 3.10.0. ( #20464 )
...
* Update recipe for AOMP.
Reduced repitition with version hashes.
Expanded dependency versioning.
Reduced repitition with cmake args.
Added version 3.10.0
* Update dependency versions and remove uneeded quotes.
* Update var/spack/repos/builtin/packages/aomp/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 13:39:57 -06:00
estewart08
c55b3bf2d9
AMD ROCm 3.10 Release: Add new package recipe for rocm-openmp-extras. ( #20204 )
...
* AMD ROCm 3.9 Release: Add new package recipe for openmp-extras.
* Updated openmp-extras recipe.
Changed name to rocm-openmp-extras.
Reduced repitition with component hashes.
Adjusted the removal of CMAKE_BUILD_TYPE.
Reduced repitition in cmake args.
Added 3.10.0 to recipe.
* Update python/py-setuptools dependency versions.
* Expand dependency versions, fix the openmp cmake args.
* Remove double formats.
* Substitute escape characters with string=True for filter_file(s).
* Remove CMAKE_VERBOSE_MAKEFILE, already present in standard args.
2021-01-05 13:39:38 -06:00
Rémi Lacroix
072d21ad96
Berkeley-DB: Fix compilation with NVIDIA HPC Compilers on Red Hat 8. ( #20616 )
2021-01-05 10:45:22 -08:00
Luca Heltai
155a3b3a08
Fix compilation for boost@1.72: ( #20618 )
2021-01-05 10:42:11 -08:00
Rémi Lacroix
18d14eb765
ParaView: Allow choosing a CUDA architecture. ( #20623 )
...
This is useful when the "native" architecture cannot be guessed.
2021-01-05 10:37:00 -08:00
Harmen Stoppels
4a7c4e6667
Add cray-fftw ( #20654 )
2021-01-05 10:22:49 -08:00
Robert Cohn
a1e4465c59
compiler version format changed ( #20671 )
2021-01-05 09:37:46 -08:00
MBlaschek
4d3c9da872
Update of Eccodes to 2.19.1 ( #20368 )
...
* Update of Eccodes to 2.19.1
* PEP8
* PEP8
* PEP8-whitespace
* Update var/spack/repos/builtin/packages/eccodes/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Michael Blaschek <michael.blaschek@univie.ac.at>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 10:09:11 -06:00
AMD Toolchain Support
350418ec35
AOCC support for WRFv3.9.1.1 ( #20568 )
...
* AOCC support for WRFv3.9.1.1
* r' as prefix for string literal
2021-01-05 10:06:24 -06:00
Axel Huebl
e6d462589f
OpenMPI: Depends on hwlock & libevent ( #20658 )
...
* OpenMPI: Depends on hwlock & libevent
Both hwlock & libevent are required dependencies of Open MPI.
While they are also shipped internally, newer releases (>=4.0)
will start looking for external packages by default.
This caused build issues of Open MPI 4.0.5 with Fortran on macOS
10.15.
* Open MPI 4.0: libevent external
Internally shipped libevent just works fine for prior releases.
2021-01-04 21:05:11 -06:00
Jim Huang
e5b03770ed
SS2NEON transition to new repository; update headers and patch ( #20647 )
2021-01-04 18:45:47 -08:00
mic84
ad29f2148e
amrex: new version 21.01 ( #20659 )
2021-01-04 18:41:06 -08:00
Stephanie Brink
dec98ed754
py-hatchet: added latest versions up to 1.3.0 ( #20667 )
2021-01-04 18:38:44 -08:00
Peter Scheibel
22a45e010a
Bugfix: Support old installations using Cray MPICH ( #20663 )
...
#20076 moved Cray-specific MPICH support from the Spack MPICH package
to a new cray-mpich Package. This broke existing package installs
using external mpich on Cray systems. This PR keeps the cray-mpich
package but restores the Cray-specific MPICH support for older
installations.
In the future this support should be removed from the Spack mpich
package and users should be directed to use cray-mpich on Cray.
2021-01-04 17:19:08 -08:00
Sreenivasa Murthy Kolam
f4acf74091
bump up rocm math libs recipes for rocm-4.0.0 release ( #20651 )
2021-01-05 00:02:03 +01:00
Rémi Lacroix
39b77e1b39
r-codetools: Update package ( #20626 )
2021-01-04 14:46:47 -08:00
Mark W. Krentel
735d5c3769
libunwind: add version 1.5.0 ( #20632 )
...
Add version 1.5.0, remove 1.4-rc1 (use 1.4.0) and 1.5-rc1 (use 1.5.0).
2021-01-04 14:37:52 -08:00
Fabian Brandt
0c6641abd0
Update libnetworkit, py-networkit to 8.0 ( #20478 )
2021-01-04 16:14:06 -06:00
yellowhat
4dd6ba44f2
fftw: bump to 3.3.9 ( #20634 )
2021-01-04 23:01:42 +01:00
Dave Love
11dd7ffad6
Add procenv ( #20121 )
...
* Add procenv
* procenv: Only buildrequire check
* procenv: Patch for gcc 10
* procenv: Add omitted patch
* Indent doc string
2021-01-04 22:08:54 +01:00
darmac
1b33008705
libthai: new package at v0.1.28 ( #19916 )
2021-01-04 17:36:12 +01:00
Sreenivasa Murthy Kolam
c9e6a4d18b
Bumpup version for rocm 4.0.0 release ( #20640 )
2021-01-04 17:16:26 +01:00
Sreenivasa Murthy Kolam
efb1e19339
bumpup version for rocm stage1 recipes for rocm-4.0.0 release ( #20635 )
2021-01-04 17:06:44 +01:00
Rémi Lacroix
47998b3f47
Libnsl: added v1.3.0 and v1.1.0. ( #20645 )
2021-01-04 16:34:42 +01:00
Rémi Lacroix
573d2ce2e1
Plumed: added v2.7.0. ( #20646 )
2021-01-04 16:34:09 +01:00
Axel Huebl
a3fb8e55d5
openPMD-api: 0.13.0 ( #20648 )
...
Add the latest release of openPMD-api.
Remove a selection of unsupported, pre-beta releases.
2021-01-04 16:29:46 +01:00
Tomoyasu Nojiri
a5611e0466
exciting: fix build on aarch64 ( #20505 )
2021-01-04 16:26:18 +01:00
Tomoyasu Nojiri
4c23d99e7d
fdupes: Add pcre2 depend ( #20466 )
...
* fdupes: Add pcre2 depend
* fdupes: Fix depend for pcre2
2021-01-04 10:12:13 +01:00
darmac
221e680e2b
Add new package: xfsdump ( #19914 )
...
* Add new package: xfsdump
* fix Description and Homepage
2021-01-03 11:20:57 -06:00
darmac
5d1bcf67cf
Add new package: py-holland ( #19924 )
...
* Add new package: py-holland
* rename py-holland to py-holland-backup
* fix dependencies
2021-01-03 11:07:37 -06:00
Sajid Ali
d685e47fb7
bump py-h5py ( #20482 )
...
* rebase and fix merge conflict
* address reviewer comments
* rework dependency handling as per reviewer comments
* incorporate reviewer feedback
* incorporate reviewer feedback
* fix phases
* address reviewer comments
* minor
2021-01-02 17:32:36 -06:00
Todd Gamblin
a8ccb8e116
copyrights: update all files with license headers for 2021
...
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
2021-01-02 12:12:00 -08:00
Tom Payerle
a1cf000655
hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5) ( #20274 )
...
* hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5)
* hdf-eos5: flake8 fixes
* hdf-eos5: trying to fix flake8 errors
* hdf-eos5: flake8 fix
* hdf-eos5: Fix to support Fortran codes
The -Df2cFortran compilation flag needed to support Fortran
2020-12-30 17:55:29 -06:00
Tom Payerle
a30ba0b836
hdf-eos2: new package (HDF for Earth Observing System using hdf5) ( #20275 )
...
* hdf-eos2: new package (HDF for Earth Observing System using hdf5)
* hdf-eos2: flake8 fixes
* hdf-eos2: fix to support Fortran
Need the compilation flag -Df2cFortran to allow support for Fortran
codes
2020-12-30 17:54:55 -06:00
Adam J. Stewart
0d95fd6d52
extends: add type kwarg ( #20045 )
...
* extends: add type kwarg
* Flake8 fix
2020-12-30 11:09:58 -06:00
eugeneswalker
717b653bdd
nalu-wind: add variant to build wind-utils ( #20587 )
2020-12-30 11:07:43 -06:00
Adam J. Stewart
5964cb49d9
Use system libuuid on macOS ( #20608 )
2020-12-30 10:13:34 -06:00
Adam J. Stewart
a4accff266
PythonPackage: url -> pypi ( #20610 )
...
* Convert all `url` attributes in `PythonPackage`s to `pypi` attributes
* add `pypi =` to flake8 exceptions
2020-12-29 16:44:04 -08:00
Michael Kuhn
c22141f444
Introduce virtual provider uuid ( #18322 )
...
libuuid is currently contained in util-linux, libuuid and uuid. This
change introduces a new virtual provider `uuid` and renames the existing
`uuid` package to `ossp-uuid`.
util-linux's libuuid is provided in the form of a separate package
util-linux-uuid to make sure that packages depending on uuid and
util-linux can use a separate uuid implementation, which the concretizer
does not allow if libuuid is contained in util-linux.
2020-12-29 10:12:26 -06:00
Adam J. Stewart
b421080c03
GDB: Better Python debugging support ( #20486 )
...
* GDB: Better Python debugging support
* Auto-load safe path
* Use gdbinit instead
2020-12-29 10:04:58 -06:00
Adam J. Stewart
8f92970714
py-geoplot: add new package at v0.4.1 ( #20603 )
2020-12-29 11:56:24 +01:00
Adam J. Stewart
03844b581a
OpenVSLAM: add new package ( #20389 )
2020-12-29 11:18:34 +01:00
Adam J. Stewart
50e9501124
py-contextily: add new package at v1.0.1 ( #20602 )
2020-12-29 11:17:24 +01:00
Yang Zongze
d41bb54729
automake: fix shebang substitution for v1.16.3 and later ( #20579 )
2020-12-29 11:16:34 +01:00
Adam J. Stewart
8babd5345f
py-geopy: add new package at v2.1.0 ( #20601 )
2020-12-29 09:11:12 +01:00
Adam J. Stewart
05f8e08067
PythonPackage: add pypi attribute to infer homepage/url/list_url ( #17587 )
2020-12-29 09:03:08 +01:00
John Wohlbier
76d23d9ee4
squashfs: fix build with GCC 10 ( #20592 )
2020-12-29 08:46:00 +01:00
Adam J. Stewart
e62676b245
Fix deptypes for some geospatial Python packages ( #20593 )
2020-12-29 08:40:23 +01:00
Adam J. Stewart
08ba1148e2
py-pygeos: add new package at v0.8 ( #20594 )
2020-12-29 08:39:45 +01:00
Glenn Johnson
747f7decc4
fsl: updated package, added v6.0.4 ( #20201 )
...
- added several patches
- added some missing dependencies
- remove unneeded dependencies
- add CUDA support
- disable queue support, which was limited, and broken anyway
- move package text that was specific to the package to a comment, so it
does not show up the environment module
- set conflicts for cuda and compilers
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-12-29 08:27:26 +01:00
Adam J. Stewart
6c9272677b
py-cartopy: specify where deps are found ( #20597 )
2020-12-29 08:04:13 +01:00
Adam J. Stewart
a13b9d8a7d
py-geographiclib: add new package at v1.50 ( #20600 )
2020-12-29 07:57:59 +01:00
Adam J. Stewart
89262fbd23
py-mercantile: add new package at v1.1.6 ( #20598 )
2020-12-29 07:56:56 +01:00
Adam J. Stewart
f1a4810ac7
py-mapclassify: add new package at v2.4.2 ( #20599 )
2020-12-29 07:56:21 +01:00
Michael Kuhn
49b5ce954a
python: add 3.8.7 and 3.9.1 ( #20589 )
2020-12-28 16:21:20 -06:00
Ryan Mast
1e971b62de
libarchive: add version 3.5.1 ( #20586 )
2020-12-28 22:48:20 +01:00
Rémi Lacroix
8919226dc6
Update OpenMPI package ( #20492 )
...
* OpenMPI: Add version 4.1.0
* OpenMPI: Prefer version 4.0.5.
* OpenMPI: Update links
The download links changed, there is currently a redirection but it might not work forever. The website also switched to https.
2020-12-28 10:56:15 -06:00
perrymil
22e8672394
nvtop: new package at v1.1.0 ( #20272 )
2020-12-28 17:43:36 +01:00
Adam J. Stewart
808f55fa1f
minizip: fix build with Apple Clang 12 ( #20554 )
2020-12-28 08:43:37 -06:00
Tomoyasu Nojiri
7f997f82c2
sionlib: fix for aarch64 ( #20525 )
2020-12-28 15:21:49 +01:00
h-denpo
0fcedea1d8
gnupg: added versions up to v2.2.5 ( #20465 )
2020-12-28 13:28:33 +01:00
h-denpo
680971650c
frontistr: add v5.1.1, need trilinos version 12 ( #20334 )
2020-12-28 13:17:18 +01:00
Tiziano Müller
e2dcec8e43
libvori: added v201224 ( #20577 )
2020-12-28 12:59:16 +01:00
QuellynSnead
39a5c75a83
libquo: add pic flags for PGI ( #20528 )
...
Enforce PIC for PGI ((https://github.com/lanl/libquo/issues/41 ))
2020-12-28 12:57:03 +01:00
a-saitoh-fj
0f6ddacc98
py-multipledispatch: new package at v0.6.0 ( #20571 )
2020-12-28 12:54:36 +01:00
ravil-mobile
82c74c49ea
zoltan: forward +int64 to parmetis, if active ( #20572 )
2020-12-28 12:53:08 +01:00
a-saitoh-fj
b6ed75f1b2
py-sparse: new package at v0.11.2 ( #20573 )
2020-12-28 12:51:39 +01:00
Yang Zongze
e4c41080b7
gmsh: added versions up to v4.7.1 ( #20336 )
2020-12-28 12:47:54 +01:00
Adam J. Stewart
69b9741e67
py-scikit-learn: add v0.24.0 ( #20519 )
2020-12-28 12:47:02 +01:00
Mark W. Krentel
025990a9c2
libmonitor: added v2020.10.15 ( #20574 )
...
Add version 2020.10.15, and add variant +dlopen to control overriding
dlopen and dlclose.
2020-12-28 11:12:45 +01:00
Adam J. Stewart
98cb74f2d1
py-geopandas: add v0.8.1 and master ( #20576 )
2020-12-28 11:11:50 +01:00
Christoph Junghans
22b56e75c4
legion: add streichler as maintainer ( #20575 )
...
* legion: add streichler as maintainer
* gasnet: add maintainers
2020-12-27 23:22:46 -07:00
Morten Kristensen
aff2a3a8e1
py-vermin: add latest version 1.1.0 ( #20569 )
2020-12-27 14:03:36 -06:00
Tomoki, Karatsu
95f63b506c
openfoam: expand 'make_fujitsu_rules' process for Ver.1812. ( #20468 )
2020-12-27 13:41:37 +01:00
ketsubouchi
0a241b2414
boost: backport python3 import fix ( #20301 )
2020-12-27 13:38:54 +01:00
Ryan Mast
2cda9ea7fd
libzmq: added v4.3.3 ( #20467 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-12-27 13:37:32 +01:00
Adam J. Stewart
e27237c0bc
Fix import tests for a few packages ( #20560 )
2020-12-27 13:24:55 +01:00
Adam J. Stewart
f82c515bbc
Add missing setuptools dependencies ( #20561 )
2020-12-27 13:24:00 +01:00
Adam J. Stewart
fa56b9b1e2
py-sphinxcontrib-*: fix recursive imports ( #20556 )
2020-12-27 11:58:34 +01:00
Adam J. Stewart
0ed654aa70
py-pandas: add v1.2.0 ( #20557 )
2020-12-27 11:57:37 +01:00
Adam J. Stewart
e3cc50b2ba
py-fiona: add v1.8.18 and master ( #20558 )
2020-12-27 11:57:13 +01:00
Adam J. Stewart
6bd4e29c65
py-rasterio: add v1.1.8 ( #20559 )
2020-12-27 11:49:54 +01:00
Adam J. Stewart
b9402094a1
py-black: add v20.8b1 ( #20565 )
2020-12-27 11:48:45 +01:00
Adam J. Stewart
c199e3f33f
py-pathspec: add v0.8.1 ( #20564 )
2020-12-27 11:48:04 +01:00
Adam J. Stewart
d74cfa4c68
py-regex: add v2020.11.13 ( #20563 )
2020-12-27 11:47:33 +01:00
Adam J. Stewart
d8b265ba17
py-toml: add v0.10.2 ( #20562 )
2020-12-27 11:47:03 +01:00
Robert Underwood
860825ee14
llvm: provide fix for python dependencies ( #20356 )
...
Previously compiler-rt didn't correctly passthrough cmake
variables for python when building the various santizers.
This patch passes these variables through.
This patch may also correctly apply to any version of LLVM
to any version of LLVM that uses the newer monorepo style organization,
and any older llvm newer than 7.0.0 as long as the paths were set
appropriately. However, this was not done so because it was not
tested with older LLVM releases.
Fixes #19908
See also: https://bugs.llvm.org/show_bug.cgi?id=48180
2020-12-26 09:47:37 -06:00
h-denpo
dd06c86559
dpdk: add conflicts('target=aarch64:') ( #20550 )
2020-12-25 16:43:05 -06:00
Tomoyasu Nojiri
f1d0ec7fc1
molden: Fix for aarch64 ( #20549 )
2020-12-25 16:41:52 -06:00
kuramoto-fj
d86c345413
PFAPACK: Add new package ( #20365 )
...
* PFAPACK: Add new package
* PFAPACK : fix flake8 errors
* add type=(build, run) to the recipe
2020-12-25 09:16:38 -06:00
kuramoto-fj
b56d1a77ad
Lis: Add new package ( #20548 )
...
* Lis: Add new package
* delete unnecessary inner quotes
2020-12-25 09:15:13 -06:00
Toyohisa Kameyama
1daf6d3df7
openwsman: fix detect python executable ( #20317 )
...
* openwsman: fix detect python executable
- use spack's python insted of system's python
- Add variant to use python.
- fix dependency.
- support python2.
* format fixed.
* fix python command.
2020-12-25 09:13:31 -06:00
Tomoyasu Nojiri
a7017f8e38
openfdtd: Add version 2.6.0 ( #20460 )
2020-12-25 09:12:42 -06:00
Tomoyasu Nojiri
db5c6e8215
openstf: Add version 1.7.0 ( #20461 )
2020-12-25 09:12:11 -06:00
a-saitoh-fj
637620a408
New package: py-pydmd ( #19809 )
...
* New package: py-pydmd
* modified:package.py
* modified: package.py
2020-12-25 00:01:21 -06:00
lorddavidiii
9c03ddbb44
cfitsio: new versions and new url sheme ( #20084 )
...
* cfitsio: new versions and new url sheme
* cfitsio: fix version order
2020-12-24 23:59:28 -06:00
Tom Payerle
0150b394d7
mumps: Fix dependency issues in shared licenses ( #20197 )
...
See issue #19644
This script makes lib[cdsz]mumps.so explicitly depend on
libmumps_common.so (and libmpiseq.so if ~mpi)
2020-12-24 23:50:27 -06:00
Cameron Stanavige
52e03b5528
unifyfs: dependency changes and new release ( #20271 )
...
This updates the UnifyFS packages to account for the latest v0.9.1
release.
Updates required and optional dependencies for the respective
releases.
Locks margo and mercury dependencies at specific versions while
integration with their latest versions is still in progress.
2020-12-24 23:46:11 -06:00
Toyohisa Kameyama
5e0376bb3b
openipmi: fix dependency and add version 2.0.29 ( #20276 )
...
* openipmi: fix dependency and add version 2.0.29
- Add perl and readline dependency
- fix dependency type
- Fix readline bug in 2.0.27 (d1dd570cf7
2020-12-24 23:34:30 -06:00
Asher Mancinelli
09f6bd2a0f
adding cce to compilers that patch gdbm ( #20353 )
2020-12-24 23:07:22 -06:00
Sreenivasa Murthy Kolam
ba62dc3dce
fix rocm_3.8.0 build error for rocprim,rocrand,rocfft packages ( #20446 )
...
* fix rocm_3.8.0 build error for rocprim,rocrand,rocfft packages
* fix flake8 errors
2020-12-24 22:54:59 -06:00
Joshua S Brown
4c8b773a42
Add pem package file ( #20447 )
...
* Add pem package file
* Cleanup formatting
* Replace homepage with url to ReadtheDocs
* Simplify package description
2020-12-24 22:54:23 -06:00
Chuck Atkins
0a32e57e51
mesa: Add missing expat dependency ( #20459 )
2020-12-24 22:53:01 -06:00
Tomoyasu Nojiri
ac68113406
libjson: Fix install parameters ( #20470 )
2020-12-24 22:46:47 -06:00
Hadrien G
58cf6d7dbd
[acts] Add version 4 ( #20472 )
...
* Add acts v4
* Please flake8
2020-12-24 22:45:50 -06:00
Gilles Gouaillardet
c2ce7c65b3
xios: add support for Fujitsu compilers ( #20474 )
2020-12-24 22:44:56 -06:00
Filippo Spiga
de068f0b52
Adding CUDA 11.2.0 ( #20477 )
2020-12-24 22:42:47 -06:00
Toyohisa Kameyama
edb25911e8
salmon-tddft: new package. ( #20543 )
...
* salmon-tddft: new package.
* remove debug print.
* remove duplicate line.
2020-12-24 22:41:11 -06:00
QuellynSnead
6684cb165a
Starting with HDF5 1.10.0, the H5FD_class_t structure has a new ( #20529 )
...
"terminate" member. Initialize it to NULL.
2020-12-24 22:35:19 -06:00
QuellynSnead
c214e4dd2d
fftw: PGI compiler has trouble with avx2/avx-512 SIMD support ( #20546 )
...
* PGI compiler has trouble with avx2 SIMD support
(https://github.com/FFTW/fftw3/issues/78 )
* Hew to the project's preferred indentation standard.
* Expand '%nvhpc' logic to include '%pgi'.
* Exceeded the max line-length.
* Break up the long compound statement into nested if's.
* Inadvertently picked up an extraneous file.
* PGI compiler has trouble with avx2/avx-512 SIMD support, too.
2020-12-24 22:33:57 -06:00
QuellynSnead
e9f0473e26
zoltan: Add PGI runtime libs to LDFLAGS ( #20547 )
...
* Add PGI runtime libs to LDFLAGS when '%pgi' in spec.
* Revert "Add PGI runtime libs to LDFLAGS when '%pgi' in spec."
This reverts commit 31c3ef8ea2
2020-12-24 22:32:58 -06:00
Kody J. Everson
5add3a2f4d
Dropped parametis dependency in 0.82 release ( #20481 )
2020-12-24 17:32:33 -06:00
Tomoyasu Nojiri
81f91de50e
nbdkit: Fix configure arg ( #20488 )
2020-12-24 17:18:05 -06:00
Tiziano Müller
5d2c09e19e
Add libvori and support for libvori (and spglib) in CP2K ( #20508 )
...
* packages: initial commit of libvori
* cp2k: add support for libvori
* cp2k: add support for spglib
2020-12-24 17:12:34 -06:00
Mark Olesen
999b35cf5f
openfoam: update for version 20.12 ( #20533 )
...
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-12-24 17:05:43 -06:00
a-saitoh-fj
4ef3fb9434
Fixed for merging patches for Fujitsu compiler in version 0.3.13 ( #20539 )
2020-12-24 17:05:01 -06:00
a-saitoh-fj
9066982168
Update to the latest version (1.6.0) ( #20540 )
2020-12-24 17:04:04 -06:00
kuramoto-fj
7d267e1440
mptensor: Add new package ( #20542 )
2020-12-24 16:59:02 -06:00
Tomoyasu Nojiri
b1a6e583c0
babelflow: Add spec ( #20544 )
2020-12-24 16:54:24 -06:00
Alexander Baumgarten
91e106ae7c
libgff: new package at version 2.0.0 ( #20233 )
...
* libgff: new package at version 2.0.0
* Removed default cmake function, fixed flake8 error
* Fixed errors
2020-12-24 16:48:01 -06:00
Michael Kuhn
2d1c4e4b5d
sqlite: add 3.34.0 ( #20354 )
2020-12-24 16:47:17 -06:00
Dr. Christian Tacke
741a0b498a
py-lxml: Add Version 4.6.1 ( #20361 )
...
Also switch homepage to https.
2020-12-24 16:46:43 -06:00
Paul R. C. Kent
763fc989c5
New versions: py-sphinxcontrib-bibtex 2.2.0 and py-pybtex-docutils 0.2.2 ( #20438 )
...
* Add v2.0.0
* Add 0.2.2
* Improve packages
* No trailing
2020-12-24 16:46:28 -06:00
Brian Van Essen
6c00ebab16
Add lbann cmake flags ( #20452 )
...
* Adding support for the CMake flags in LBANN that are missing.
* Added new flag to OpenCV dependency and removed negative variants
since OpenCV no longer turns on everything by default. Removed CMake
flags in LBANN that have been deprecated.
* Removed type='build' flags from dependencies so that they get linked
into a environment's view.
* Removed type='build' flags from dependencies so that they get linked
into a environment's view. Fixed DiHydrogen variant to enable
DistConv feature, renamed to +distconv from +legacy. Added conflicts
line to indicated that DistConv and ROCm don't work with +half
support.
* Fixed Flake8 and cleaned up ordering of variants.
* Flake8
* Backed out changes to not mark and cmake and ninja as build
dependencies, which was introduced to make sure that they appear in
a spack environment.
* Backed out changes to not mark doc related packages as build
dependencies, which was introduced to make sure that they appear
in a spack environment.
* Fixed how recipe communicates the intent to build and run tests to the
package CMake.
2020-12-24 16:46:12 -06:00
Joshua S Brown
ee0ec12603
Add py-ez-setup package file ( #20520 )
...
* Add py-ez-setup package file
* Cleanup formatting
* Cleanup formatting take 2
2020-12-24 16:43:15 -06:00
tilne
805cc61036
Update ParallelCluster to v2.10.1 ( #20524 )
...
Signed-off-by: Tim Lane <tilne@amazon.com>
2020-12-24 16:42:53 -06:00
zorun
f2c523db1e
[gcc] Make ISL optional by adding a +graphite variant ( #20531 )
...
Fixes : #20515
Co-authored-by: Baptiste Jonglez <git@bitsofnetworks.org>
2020-12-24 20:17:35 +01:00
zorun
4ef33a4cd7
[gcc] Explicitly disable libs when they are not required ( #20532 )
...
This is to make sure that the build system doesn't pick up a library that
would happen to be available.
Co-authored-by: Baptiste Jonglez <git@bitsofnetworks.org>
2020-12-24 19:39:46 +01:00
Todd Gamblin
1571d6240b
style: ensure that all packages pass spack style -a
...
- fix trailing whitespace and other issues uncovered by better flake8
checking.
- fix extra whitespace printed by `spack style` command
2020-12-23 16:17:54 -08:00
Robert Cohn
0bb18d8a38
Add Intel oneAPI packages ( #20411 )
...
This creates a set of packages which all use the same script to install
components of Intel oneAPI. This includes:
* An inheritable IntelOneApiPackage which knows how to invoke the
installation script based on which components are requested
* For components which include headers/libraries, an inheritable
IntelOneApiLibraryPackage is provided to locate them
* Individual packages for DAL, DNN, TBB, etc.
* A package for the Intel oneAPI compilers (icx/ifx). This also includes
icc/ifortran but these are not currently detected in this PR
2020-12-23 15:39:40 -08:00
Howard Pritchard
88a608a26c
papi: patch fortran tests for Cray FTN compiler ( #20339 )
...
Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2020-12-23 09:31:19 -06:00
Harsh Bhatia
a93f6ca619
Add patch to fix bazel build on power9 ( #20512 )
...
* fix bazel on power9
* small fix in tensorflow package
* removed import not needed anymore
2020-12-22 16:50:03 -06:00
Ben Bergen
97aa455f14
Patch meson.build llvm config strategy ( #20451 )
...
This patch logic resovles a linking issue with ncurses in the mesa
package. This appears to be a recurring problem that was identified in
the mesa gitlab issues here:
https://gitlab.freedesktop.org/mesa/mesa/-/issues/2843
Using `_llvm_method = 'auto'` is broken. This patch replaces that with
`_llvm_method = 'config-tool'`, which is a hack, but makes it possible
to build.
I have commented on the closed issue (2843), referencing the original
author of the bug, and one of the mesa developers, so perhaps they will
fix the problem.
2020-12-22 10:39:56 -07:00
Paul
32f0bf9057
Corrected Go dependent build environment. ( #18493 )
...
* Dependencies of Go will now correctly set the GOPATH for the
appropriate spec to avoid using the user's default path.
* Bumped version to latest releases(1.15.6 & 1.14.13).
2020-12-21 19:47:53 -06:00
Vicente Bolea
a9925036df
ParaView: add new ParaView-5.9.0-RC3 release ( #20500 )
...
Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
2020-12-21 19:46:01 -06:00
Todd Gamblin
1d8aa34f52
clingo: prefer master branch
...
Most people installing `clingo` with Spack are going to be doing it to
use the new concretizer, and that requires the `master` branch.
- [x] make `master` the default so we don't have to keep telling people
to install `clingo@master`. We'll update the preferred version when
there's a new release.
2020-12-21 16:02:09 -08:00
downloadico
4654a8a557
New package: PMERGE ( #20390 )
2020-12-21 12:55:22 -08:00
Karen C. Tsai
4a6269319e
upstream dependencies changes ( #20493 )
...
* update dependencies and cmake options
* add blank line
2020-12-21 12:20:49 -07:00
amd-toolchain-support
e73a65db9a
Added support for AOCC compiler
2020-12-21 00:27:37 -08:00
Dr. Christian Tacke
5df6418b64
geant4-vmc: Add version 5-3, switch to https ( #20379 )
2020-12-20 10:47:53 -06:00
Jan Ciesko
517413c125
Add spack test support for Qthreads ( #20437 )
2020-12-18 13:38:40 -08:00
eugeneswalker
2314a20fbd
slepc: set --with-arpack-dir correctly ( #20463 )
2020-12-18 11:03:26 -08:00
Chuck Atkins
8755d577c9
mesa: drop use of shared variant ( #20453 )
...
Mesa no longer supports building static libraries so it doesn't
even make sense to add the variant.
2020-12-18 09:58:51 -06:00
eugeneswalker
13e4d9ee3a
py-greenlet: add version 0.4.17 ( #20457 )
...
* py-greenlet: add version 0.4.17
* py-greenlet depends on python for build, link, and run
2020-12-17 19:38:43 -08:00
Chuck Atkins
c5b4a667d3
meson: Add cmake runtime dependency ( #20449 )
2020-12-17 16:56:39 -05:00
Harmen Stoppels
a879c875dd
New package: cray-mpich ( #20076 )
...
Cray's version of MPICH uses a different versioning system than
MPICH, so it has been split into its own package. It is an
external-only package (always provided by the system, never
installed by Spack).
2020-12-17 13:13:21 -08:00
eugeneswalker
105ee757bc
superlu depends on tcsh for build ( #20381 )
2020-12-17 12:26:18 -08:00
Dr. Christian Tacke
e858bb2961
cmake: Add Version 3.19.2 ( #20448 )
2020-12-17 20:25:51 +01:00
manifest
888c456ece
add py-gemini ( #16950 )
...
* py-gemini +
* dep py-setuptools +
* deps grabix+
* py-gemini dep version fix
* grabix compiler fix
* Update package.py
Typo correction
2020-12-17 12:17:01 -06:00
takanori-ihara
a0843e9634
biobambam2: new package at v2.0.177 ( #20392 )
2020-12-17 17:47:01 +01:00
Adam J. Stewart
120e5cdcc4
pangolin: add new package ( #20388 )
2020-12-17 17:45:26 +01:00
Ryan S. Elliott
12378db0d8
kim-api: added v2.2.1 ( #20382 )
2020-12-17 17:44:33 +01:00
ketsubouchi
4677674667
suite-sparse: add flags for Fujitsu compilers ( #20393 )
2020-12-17 17:40:01 +01:00
Adam J. Stewart
860a945de6
OpenCV: add versions up to v4.5.0, variants ( #20378 )
2020-12-17 17:06:28 +01:00
Michael Kuhn
c79647d66b
flexi: new package ( #20313 )
2020-12-17 17:02:49 +01:00
Michael Kuhn
8f8c9b34a9
openblas: added v0.3.13 ( #20357 )
2020-12-17 17:01:49 +01:00
Ryan Mast
3d7fe28966
mbedtls: added v2.16.9 ( #20422 )
2020-12-17 16:55:20 +01:00
Adam J. Stewart
b86743c879
DBoW2: add new package ( #20387 )
2020-12-17 16:54:34 +01:00
Hadrien G
e61fb96e96
acts: added v3.00.0 ( #20402 )
2020-12-17 14:27:06 +01:00
Massimiliano Culpo
076ea2fe4c
arm: added new package ( #18019 )
...
The package is at the moment not installable, just detectable.
2020-12-17 10:02:36 +01:00
Massimiliano Culpo
045afc8788
xlc, xlf: added new packages ( #18154 )
2020-12-17 10:00:06 +01:00
Ryan Mast
9692017d59
help2man: update to 1.47.16 ( #20397 )
2020-12-17 09:07:56 +01:00
Ryan Mast
e0e6a0199e
sundials: add versions up to 5.6.1 ( #20436 )
2020-12-16 18:26:47 -08:00
Ben Cowan
ed740fb654
Added PyAMG package. ( #20414 )
2020-12-16 17:58:41 -08:00
Ryan Mast
2bc5516a95
cli11: add new package ( #20398 )
2020-12-16 15:26:37 -08:00
Adam J. Stewart
826cd07cf7
PythonPackage: add import module smoke tests ( #20023 )
2020-12-16 15:15:03 -08:00
Ryan Mast
cd496a20e9
ninja: update to version 1.10.2 ( #20399 )
2020-12-16 14:49:12 -08:00
arjun-raj-kuppala
620fbf6e90
AMD ROCm release for mivisionx Bump up versions - 3.9.0 and 3.10.0 ( #20401 )
2020-12-16 16:46:23 -06:00
Adam J. Stewart
4d09dc4c61
dlib: add new package ( #20386 )
2020-12-16 14:28:39 -08:00
Thomas Gruber
2bb9116219
pylikwid: New recipe ( #20408 )
2020-12-16 14:17:37 -08:00
Ryan Mast
046e3fcae3
automake: update to 1.16.3 ( #20421 )
2020-12-16 14:12:04 -08:00
Zhiyi Wu
8539fcfd70
Update the plumed 2.6.2 ( #20425 )
2020-12-16 14:02:41 -08:00
Desmond Orton
3ff600b1cf
Version update to 5.3.0 ( #20433 )
2020-12-16 13:49:57 -08:00
David Beckingsale
dcc67dad15
Add RAJA v0.13.0 ( #20431 )
2020-12-16 13:45:57 -08:00
Ethan Stam
86f006ffa9
Match master version instead of develop for PARAVIEW_VTK_DIR ( #20427 )
2020-12-16 12:29:35 -06:00
Danny Taller
d505ef8217
loop fuser option ( #20417 )
2020-12-16 10:44:43 +01:00
thelfer
c52d9dc445
Added TFEL v3.4 and MGIS v1.2 ( #20234 )
2020-12-16 10:40:34 +01:00
Ben Cowan
c02625eb53
Kluge to get the gfortran linker to work correctly for SciPy on Big Sur. ( #20367 )
...
* Kluge to get the gfortran linker to work correctly on Big Sur.
* Fixed formatting error; stetting the other.
* Removed spaces.
* Added comment, mainly to re-trigger Spack CI.
2020-12-15 14:25:23 -06:00
Dr. Christian Tacke
a7a5fd3fa3
fmt: added v7.1.3, update URLs ( #20404 )
2020-12-15 18:15:25 +01:00
Ryan Mast
168f07181d
bison: added versions up to v3.7.4 ( #20400 )
2020-12-15 18:13:33 +01:00
AMD Toolchain Support
7dc56a293f
gromacs: removed mentions of non-existing variants ( #20405 )
2020-12-15 17:44:59 +01:00
Massimiliano Culpo
7501d9d150
dealii, piranha, trilinos: remove mentions of non-existing variants ( #20406 )
2020-12-15 17:44:20 +01:00
Mark W. Krentel
d6bfc104bf
comgr: disable hip compile test from /opt/rocm ( #20330 )
2020-12-15 13:55:45 +01:00
Massimiliano Culpo
e7f4c2b49e
package sanity: ensure all variant defaults are allowed values ( #20373 )
2020-12-15 10:22:15 +01:00
Tamara Dahlgren
c6c1af4969
Bugfix: Correct the git URL ( #20391 )
2020-12-14 19:11:06 -08:00
Vicente Bolea
e3fa8d9f52
ParaView: add new ParaView-5.9.0-RC2 release ( #20222 )
...
* ParaView: add new ParaView-5.9.0-RC2 release
Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
* Update var/spack/repos/builtin/packages/paraview/package.py
Indeed, I misunderstood the previous review. This looks good to me too.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-12-14 15:23:50 -06:00
Ryan Mast
86ae63b648
bazel: add latest versions up to 3.7.1 ( #20355 )
2020-12-14 12:27:38 -06:00
Tim Haines
7e93240b97
boost: added v1.75.0 ( #20366 )
2020-12-14 19:20:33 +01:00
Andre Sailer
d1bebb4d05
mysql: fixed variant mismatch with boost ( #20370 )
...
Require boost at cxxstd=14 if cxxstd=14 is selected, not 11
2020-12-14 14:31:57 +01:00
Thomas Gruber
8fd4719291
likwid: Add variant for Nvidia GPU profiling feature ( #20337 )
2020-12-14 10:20:07 +01:00
Axel Huebl
f0b7be8263
WarpX: PSATD on ( #20342 )
...
Enabling PSATD is not mutually exclusive with other runtime options
anymore, so we can always compile with support for it to ease
usability.
2020-12-14 10:15:50 +01:00
Brian Van Essen
b7aea9f3b1
Propagate cuda_arch downstream from LBANN, Hydrogen and DiHydrogen ( #20345 )
2020-12-14 10:14:49 +01:00
Ryan Mast
fc8c07df2f
gradle: updated versions up to v6.7.1 ( #20358 )
2020-12-14 10:03:00 +01:00
takanori-ihara
5c43be7694
libmaus2: new package at v2.0.767 ( #20300 )
2020-12-14 09:29:58 +01:00
Tomoyasu Nojiri
12c8be73b3
wps: fix build for aarch64 ( #20363 )
2020-12-14 09:18:19 +01:00
yellowhat
0924b20984
fio: added v3.25 ( #20302 )
2020-12-11 15:16:28 +01:00
vvolkl
e6f2fa34d0
dd4hep: added v01-15, edm4hep variant and updated url_for_version ( #20304 )
2020-12-11 15:15:41 +01:00
Levi Baber
d55dfe07d9
albert: added v4.0a ( #20306 )
2020-12-11 14:35:50 +01:00
Dr. Christian Tacke
3be8a5e007
root: added v6.22.06 ( #20309 )
2020-12-11 14:23:46 +01:00
vvolkl
047bf4d902
prmon: added v2.1.1 ( #20318 )
2020-12-11 11:27:28 +01:00
Desmond Orton
ea7d14af10
py-dadi: added new package at v2020-12-02 ( #20314 )
2020-12-11 10:26:01 +01:00
Ryan Marcellino
9721e0fdec
openjdk: bump version 1.8 and 11 ( #20315 )
2020-12-11 10:24:25 +01:00
QuellynSnead
dcfd22cca9
caliper: add a variant to enable Fortran support ( #20332 )
2020-12-11 10:10:21 +01:00
manifest
955a5c0fc8
py-angel: new package at v3.0 ( #20331 )
2020-12-11 10:02:18 +01:00
Adam J. Stewart
207f71246a
py-torchvision: add v0.8.2 ( #20328 )
2020-12-11 09:53:12 +01:00
Adam J. Stewart
28def448ff
py-torch: add v1.7.1 ( #20327 )
2020-12-11 09:52:51 +01:00
Tomoyasu Nojiri
6672278e68
py-pyarrow: fix build for aarch64 ( #20335 )
2020-12-11 09:37:36 +01:00
Robert Pavel
1728b0ea25
flux: added v0.20.0 and v0.21.0 ( #20322 )
...
Fixed hard tab in flux-sched edit and unbound hwloc in flux-core after
testing to better support modern MPIs in spack environments
Verified that flux-core@0.17 is when hwloc@2: became viable
2020-12-11 09:08:02 +01:00
Dr. Christian Tacke
6f6855d437
curl: added v7.64.0, v7.74.0 ( #20321 )
2020-12-11 09:06:54 +01:00
Tamara Dahlgren
59628cd9e8
Tests: enable re-use of post-install tests in smoke tests ( #20298 )
2020-12-10 10:35:27 -08:00
Dr. Christian Tacke
6c26203f95
hepmc: Add 2.06.11, switch to https ( #20286 )
2020-12-10 11:40:02 -05:00
Itaru Kitayama
9bcf99358e
Add a new NEST version, 2.20.0. ( #20316 )
...
* Add a new NEST version, 2.20.0.
* Scalasca requires Score-P as a 'run' dependency.
Co-authored-by: Itaru Kitayama <itaru.kitayama@riken.jp>
2020-12-10 06:43:16 -06:00
arjun-raj-kuppala
3d568d1553
AMD ROCm Release: Bump up versions(3.9.0 and 3.10.0) for miopen-hip ( #20296 )
2020-12-10 11:55:07 +01:00
Christoph Junghans
e117e087eb
votca-*: add v1.6.3 ( #20308 )
2020-12-09 15:06:54 -07:00
Filippo Spiga
5b1739da72
Adding NVIDIA HPC SDK 20.11 ( #20287 )
2020-12-09 09:53:05 -08:00
Filippo Spiga
adbbd6f28f
Adding CUDA 11.1.1 ( #20289 )
2020-12-09 09:47:03 -08:00
arjun-raj-kuppala
8f8f83620d
AMD ROCm Release: Bump up migraphx recipe with 3.9.0 and 3.10.0 ( #20299 )
2020-12-09 09:40:54 -08:00
AMD Toolchain Support
0b62b33d18
Below changes were added to lammps recipe: ( #20288 )
...
1) amdfftw library support
2) opt added in supported packages
2020-12-09 09:36:59 -08:00
Jose E. Roman
af307d3120
New patch release SLEPc 3.14.1 ( #20291 )
2020-12-09 09:29:24 -08:00
Michael Kuhn
1969af2440
openssl: add 1.1.1i ( #20294 )
2020-12-09 07:52:15 -05:00
Tim Moon
90b3f7f259
Make sure py-protobuf package can link to libprotobuf when building ( #20280 )
2020-12-08 09:52:57 -06:00
lorddavidiii
15fd386a20
arpack-ng: added v3.8.0 ( #20270 )
2020-12-08 16:37:53 +01:00
Andrew W Elble
a90026fb89
concretizer: try hard to obtain all needed variant_possible_value()'s ( #20102 )
...
Track all the variant values mentioned when emitting constraints, validate them
and emit a fact that allows them as possible values.
This modification ensures that open-ended variants (variants accepting any string
or any integer) are projected to the finite set of values that are relevant for this
concretization.
2020-12-08 15:46:52 +01:00
Alexander Baumgarten
5dcd0c9076
r-vctrs: added v0.3.5 ( #20267 )
2020-12-08 14:09:09 +01:00
Adam J. Stewart
0344648149
py-pandas: add v1.1.5 ( #20268 )
2020-12-08 14:08:36 +01:00
Alexander Baumgarten
09aa1b2092
r-fansi: added v0.4.1 ( #20269 )
2020-12-08 14:08:11 +01:00
Dan Bonachea
1681c19d04
UPC++: added v2020.11.0 and v2020.10.0 ( #20279 )
...
2020.10.0 is the latest stable release, and the preferred version
for general use (when the user does not specify otherwise).
2020.11.0 is a prototype for the memory kinds feature that is also
available when requested.
2020-12-08 11:23:32 +01:00
Tomoki, Karatsu
46ec233a7d
ghostscript: limited fujitsu compiler's version to apply patch. ( #20281 )
2020-12-08 11:05:30 +01:00
vvolkl
8035a52f7b
edm4hep: added package at v0.3, updated podio at v0.13 ( #20241 )
2020-12-07 18:58:10 +01:00
vvolkl
ed258ca9e9
Add "spack versions --new" flag to only show new versions ( #20030 )
...
* [cmd versions] add spack versions --new flag to only fetch new versions
format
[cmd versions] rename --latest to --newest and add --remote-only
[cmd versions] add tests for --remote-only and --new
format
[cmd versions] update shell tab completion
[cmd versions] remove test for --remote-only --new which gives empty output
[cmd versions] final rename
format
* add brillig mock package
* add test for spack versions --new
* [brillig] format
* [versions] increase test coverage
* Update lib/spack/spack/cmd/versions.py
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
* Update lib/spack/spack/cmd/versions.py
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-12-07 09:29:10 -06:00
ketsubouchi
b4ed4fb226
povray: model mkl dependency correctly ( #20265 )
...
Added the correct depends_on directive if the mkl variant is active.
Added conflicts for archs that don't support mkl
2020-12-07 15:45:56 +01:00
Owen Solberg
af9bf816fe
py-xopen: added v1.0.1 and v0.8.4 ( #20245 )
2020-12-07 10:25:53 +01:00
Robert Maynard
039d4a81be
VTK-m: update to specify correct requirements to kokkos ( #20097 )
2020-12-07 10:16:44 +01:00
Martin Oberzalek
a5b3a77741
krb5: added 'shared' variant and support to build static library ( #20017 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-12-07 10:13:01 +01:00
Adam J. Stewart
401fe7179f
OpenCV: disable variants by default ( #20162 )
2020-12-07 10:10:28 +01:00
Jacob Merson
1f73c87157
ccls: new package at v0.20201025 ( #20251 )
2020-12-07 09:53:34 +01:00
Jacob Merson
89c54ff01e
spdlog: added versions up to v1.8.1 ( #20252 )
2020-12-07 09:49:23 +01:00
Paul R. C. Kent
ec3a506414
curl: added v7.73.0 ( #20246 )
2020-12-07 09:23:02 +01:00
iulian787
bb27b05b24
tempestremap: added new package at v2.0.5, updated moab to v5.2.1 ( #20014 )
2020-12-07 09:21:32 +01:00
h-denpo
3c2392554b
apr: add depends_on ('libuuid', type='link') ( #20261 )
2020-12-07 09:02:40 +01:00
Sreenivasa Murthy Kolam
0fc36844b0
atmi, rccl: added v3.10.0 (rocm-3.10.0) ( #20264 )
2020-12-07 08:52:33 +01:00
Massimiliano Culpo
3843f43e69
concretizer: each external version is allowed by definition ( #20247 )
...
Registering external versions among the lists of allowed ones
generates the correct rules for `version_satisfies`
2020-12-06 10:29:05 +01:00
perrymil
fbb127c46a
raxml-ng: new package at v1.0.1 ( #20223 )
2020-12-04 22:56:24 +01:00
Ben Morgan
0dd628d0d3
geant4, geant4-data: versions 10.6.3 and 10.7.0 ( #20250 )
...
Update geant4-data and individual datasets for Geant4 versions 10.6.3
and 10.7.0.
Update geant4 package with new versions 10.6.3 and 10.7.0. Update
dependencies on CLHEP and VecGeom with versions required for Geant4
10.7.
Add GEANT4_INSTALL_PACKAGE_CACHE=OFF to CMake args for 10.6 onwards.
Prevents install of the "package cahce" file that contains hard-coded
paths for dependencies, improving relocatability. It relies on Spack
setting CMAKE_PREFIX_PATH correctly in build/use environments that
consume the geant4 package.
2020-12-04 13:22:47 -05:00
Massimiliano Culpo
8b74b50cff
concretizer: restrict maximizing variant values to MV variants ( #20194 )
2020-12-04 16:27:03 +01:00
TAKAHASHI Shuuji
98517af024
postgresql: added xml variant ( #20224 )
2020-12-04 12:27:52 +01:00
arjun-raj-kuppala
321298b115
AMD ROCm - Bump up rocalution with 3.9.0 and 3.10.0 releases ( #20243 )
2020-12-04 11:23:55 +01:00
Sreenivasa Murthy Kolam
5c0ac61a95
Added v3.10.0 for miopengemm, rocm-opencl and rocm ( #20235 )
2020-12-04 10:21:10 +01:00
Erik Schnetter
2d3e491845
amrex: constrain cmake if using cuda 11 ( #20237 )
...
`cmake @3.17:` is necessary to handle `cuda @11:` correctly. Earlier versions of `cmake` do not know that `cuda @11:` does not support `compute_30` any more, and list that compute capability as supported. This is handled in `cmake`'s file `Modules/FindCUDA/select_compute_arch.cmake`.
2020-12-04 10:16:35 +01:00
Ethan Stam
f391b2e8e5
py-cinemasci: new package at v1.3 ( #20239 )
2020-12-04 10:13:45 +01:00
Howard Pritchard
61f0f840d4
libtheora: patch for png_sizeof issue ( #20240 )
...
See
https://gitlab.freedesktop.org/gstreamer/cerbero/blob/master/recipes/libtheora/0004-examples-Don-t-use-png_sizeof.patch
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-12-04 10:12:44 +01:00
George Hartzell
9afaaa3c25
bowtie2: fix installation prefix ( #20205 )
...
The bowtie2 Makefile uses `prefix`, not `PREFIX`, for versions before v2.4.
Credit to @tkameyama
Co-authored-by: george.hartzell <george.hartzell@sana.com>
2020-12-04 09:59:59 +01:00
Andrew W Elble
09aae616c7
concretizer: call inject_patches_variants() on the roots of the specs ( #20203 )
...
As was done in the old concretizer. Fixes an issue where conditionally
patched dependencies did not show up in spec (gdal+jasper)
2020-12-03 16:28:34 +01:00
Sreenivasa Murthy Kolam
39be60ab92
bump up version for rocm_3.10.0 rel ( #20229 )
2020-12-03 14:28:51 +01:00
Sreenivasa Murthy Kolam
a1b9a00a13
bumpup the version for rocm-3.10.0 release ( #20227 )
2020-12-03 12:40:54 +01:00
Danny Taller
e22e037e30
Add CARE package, fixes for ROCmPackage and subclasses ( #20070 )
...
* use develop version of blt with fixes for rocm
* package updates for care+rocm
* fixes for plain cpu build
* add camp dependency on raja
2020-12-02 17:07:56 -08:00
Danny Taller
f37adc71f0
fix harmen branch ( #20216 )
2020-12-02 22:49:24 +01:00
fcannini
007ff2a6b0
namd: added cuda support ( #20143 )
2020-12-02 20:22:12 +01:00
Justin S
651bd50d86
py-mikado: new package at 20201016 ( #20186 )
2020-12-02 20:20:27 +01:00
Desmond Orton
c65090bac1
blast-plus: added v2.11.0 ( #20024 )
...
Co-authored-by: Dan Han <las_danhan@iastate.edu>
2020-12-02 20:02:14 +01:00
Andrew W Elble
881c4e87df
pmix/openpmix: added v3.2.1 and v3.1.5 ( #20087 )
2020-12-02 19:36:30 +01:00
Sreenivasa Murthy Kolam
ff4c45289e
bump up version for rocm-3.10.0 release ( #20214 )
...
* bump up version for rocm-3.10.0 release
* bump up version for rocm-3.10.0
* remove duplicate version addition for 3.9.0
* bump up version for rocm-3.10.0 release
* bump up version for rocm-3.10.0 release
* bump up version for rocm-debug-agent and rocm-dbgapi
* bump up version for rocm-bandwidth-test,rocm-gdb,rocprofiler,roctracer for rocm-3.10.0
2020-12-02 12:33:40 -06:00
Justin S
6d0e8d760a
r-loo: added v2.3.1 ( #20075 )
2020-12-02 19:33:21 +01:00
Adam J. Stewart
80b6b768df
G2O: add new package ( #20165 )
2020-12-02 19:30:26 +01:00
Adam J. Stewart
898ac9f9c2
libqglviewer: build dylib instead of Framework ( #20178 )
2020-12-02 19:23:31 +01:00
Andrew W Elble
3c25ae5130
py-ucx-py: added new package at v0.16.0 ( #20093 )
...
Added also py-pynvml
2020-12-02 19:15:23 +01:00
mic84
5deeff89f3
amrex: added v20.12 ( #20200 )
2020-12-02 19:05:55 +01:00
Howard Pritchard
d84c59c9a0
libtheora: patch autogen.sh to avoid ( #20008 )
...
configure problem when spack runs the configure stage of its build/install pipeline
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-12-02 10:24:37 -06:00
