Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						8c2fe52f8e
					 | 
					
						
						
							
							r-s4vectors: added versioned dependency on r (#5672)
						
						
						
						
						
						
					 | 
					
						2017-10-13 18:32:17 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						c13e13a52b
					 | 
					
						
						
							
							likwid: update versions (#5757)
						
						
						
						
						
						
					 | 
					
						2017-10-13 16:08:49 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						2c73c9fb50
					 | 
					
						
						
							
							r-xvector: added versioned dependency on r (#5731)
						
						
						
						
						
						
					 | 
					
						2017-10-13 16:01:18 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Satish Balay
							
						 
					 | 
					
						
						
							
						
						6fcfc3bd5a
					 | 
					
						
						
							
							flake8: fix warnings (#5759)
						
						
						
						
						
						
					 | 
					
						2017-10-13 15:16:58 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Ondřej Čertík
							
						 
					 | 
					
						
						
							
						
						6c3184820a
					 | 
					
						
						
							
							Use cflags instead of the args variable (#5756)
						
						
						
						
						
						
						
						That way the user can still append things to CFLAGS. 
						
						
					 | 
					
						2017-10-13 15:15:06 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Christoph Junghans
							
						 
					 | 
					
						
						
							
						
						3c7dd367f8
					 | 
					
						
						
							
							py-espresso: initial commit (#5724)
						
						
						
						
						
						
					 | 
					
						2017-10-13 12:29:30 -07:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Christoph Junghans
							
						 
					 | 
					
						
						
							
						
						23e801923d
					 | 
					
						
						
							
							espressopp -> py-espressopp (#5732)
						
						
						
						
						
						
						
						* espressopp -> py-espressopp
* Update package.py 
						
						
					 | 
					
						2017-10-13 12:28:36 -07:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Ondřej Čertík
							
						 
					 | 
					
						
						
							
						
						e76cfbbfd8
					 | 
					
						
						
							
							Fix m4 to compile with Intel (#5728)
						
						
						
						
						
						
						
						Fixes #5705. 
						
						
					 | 
					
						2017-10-13 11:20:49 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						8ffe18f1dc
					 | 
					
						
						
							
							r-biostrings: added versioned dependency on r (#5667)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:51:30 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						ce1e5e3098
					 | 
					
						
						
							
							r-zlibbioc: added versioned dependency on r (#5674)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:50:10 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						b8c1ce43fa
					 | 
					
						
						
							
							trilinos / oce : add missing if before calling macOS_version (#5743)
						
						
						
						
						
						
						
						* trilinos: add missing if before calling macOS_version
* oce: add missing if before calling macOS_version 
						
						
					 | 
					
						2017-10-13 07:49:18 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						9716a6f37f
					 | 
					
						
						
							
							r-readr: created new package (#5741)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:47:43 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						350624a231
					 | 
					
						
						
							
							r-dorng: created new package (#5740)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:47:01 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						9f3e055e8b
					 | 
					
						
						
							
							r-stringr: added list_url and version 1.2.0 (#5738)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:46:29 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						525b69bbad
					 | 
					
						
						
							
							r-stringi: added list_url and version 1.1.5 and 1.1.3 (#5737)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:45:26 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						0b117a03c6
					 | 
					
						
						
							
							r-summarizedexperiment: created new package (#5734)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:45:05 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						501ebe6706
					 | 
					
						
						
							
							r-yaqcaffy: added list_url and versioned dependency on r (#5730)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:44:26 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						65f12c8160
					 | 
					
						
						
							
							slepc: refine version constraints for petsc 3.8 (#5752)
						
						
						
						
						
						
					 | 
					
						2017-10-13 07:11:17 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						22ef8efce9
					 | 
					
						
						
							
							openblas: remove extra develop version (#5750)
						
						
						
						
						
						
					 | 
					
						2017-10-13 12:10:05 +02:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						b182e2334d
					 | 
					
						
						
							
							gettext: fix prefix (#5749)
						
						
						
						
						
						
					 | 
					
						2017-10-13 10:52:55 +02:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Brian Van Essen
							
						 
					 | 
					
						
						
							
						
						bd185b8146
					 | 
					
						
						
							
							Lbann flags (#5747)
						
						
						
						
						
						
						
						* Fixed the datatype flag in the LBANN package.  Also added develop
version to OpenBLAS.
* Fixed where the datatype flag should be set. 
						
						
					 | 
					
						2017-10-12 20:23:38 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						f2a6685d8c
					 | 
					
						
						
							
							r-gcrma: added versioned dependency on r (#5670)
						
						
						
						
						
						
					 | 
					
						2017-10-12 16:18:30 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						d4906169e0
					 | 
					
						
						
							
							r-simpleaffy: added versioned dependency on r (#5673)
						
						
						
						
						
						
					 | 
					
						2017-10-12 16:18:15 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Satish Balay
							
						 
					 | 
					
						
						
							
						
						59163f9750
					 | 
					
						
						
							
							petsc: add in maintainers (#5729)
						
						
						
						
						
						
					 | 
					
						2017-10-12 15:09:47 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								David Hows
							
						 
					 | 
					
						
						
							
						
						8ff8b7476c
					 | 
					
						
						
							
							Add the option for a versioned layout to boost (#5709)
						
						
						
						
						
						
					 | 
					
						2017-10-12 12:51:39 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Audrey Thoma
							
						 
					 | 
					
						
						
							
						
						36ed96e7dd
					 | 
					
						
						
							
							kaks-calculator: new package (#5725)
						
						
						
						
						
						
						
						* kaks-calculator: new package
* kaks-calculator: new package
* fixing homepage 
						
						
					 | 
					
						2017-10-12 12:47:11 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Satish Balay
							
						 
					 | 
					
						
						
							
						
						98c2184bd3
					 | 
					
						
						
							
							petsc: update to latest 3.8 version [and include 3.7.7] (#5723)
						
						
						
						
						
						
						
						Also fix flake8 warning "import os should be before import sys" 
						
						
					 | 
					
						2017-10-12 12:46:00 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Jon Rood
							
						 
					 | 
					
						
						
							
						
						c0b2e7db73
					 | 
					
						
						
							
							Add OpenFAST package (wind turbine simulation tool). (#5662)
						
						
						
						
						
						
						
						* Add OpenFAST package (wind turbine simulator).
* Adding maintainer to openfast package.
* Fixing copyright date. 
						
						
					 | 
					
						2017-10-12 11:42:51 -07:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						1b53e82348
					 | 
					
						
						
							
							various fixes for macOS high sierra (#5647)
						
						
						
						
						
						
						
						* various fixes for macOS high sierra
* add macOS_version() helper function
* flake8 fixes
* update oce and trilinos
* fix bison 
						
						
					 | 
					
						2017-10-12 11:41:57 -07:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Carlos Bederián
							
						 
					 | 
					
						
						
							
						
						db149876a4
					 | 
					
						
						
							
							samtools: add version 1.6 + some fixes (#5715)
						
						
						
						
						
						
						
						* htslib: add version 1.6
* samtools: add version 1.6, remove zlib dependency
* bcftools: add version 1.6, switch to using standalone htslib 
						
						
					 | 
					
						2017-10-12 10:08:31 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Audrey Thoma
							
						 
					 | 
					
						
						
							
						
						87c65fafa9
					 | 
					
						
						
							
							minimap2: new package (#5722)
						
						
						
						
						
						
					 | 
					
						2017-10-12 10:07:42 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								David Hows
							
						 
					 | 
					
						
						
							
						
						90cd075277
					 | 
					
						
						
							
							Initial version of libpcap (#5710)
						
						
						
						
						
						
						
						Add a package script for libpcap with the current version (1.8.1) 
						
						
					 | 
					
						2017-10-12 07:00:21 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						e807397074
					 | 
					
						
						
							
							r-affy: added versioned dependency on r (#5660)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:49:48 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						36eba3bf58
					 | 
					
						
						
							
							r-affyio: added versioned dependency on r (#5661)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:49:28 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						db0fec4d09
					 | 
					
						
						
							
							r-biocinstaller: added versioned dependency on r (#5663)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:49:08 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						4e8ac1d525
					 | 
					
						
						
							
							r-matrixstats: created new package (#5682)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:48:39 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						5e41ad6fed
					 | 
					
						
						
							
							r-biocgenerics: added version 0.22.1 and added versioned dependency on r (#5683)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:48:19 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						8d48f07de1
					 | 
					
						
						
							
							r-genomeinfodbdata: added versioned dependency on r (#5685)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:48:00 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						a04e95a492
					 | 
					
						
						
							
							r-genomeinfodb: created new package (#5695)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:47:03 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						dc95dddd61
					 | 
					
						
						
							
							r-genomicranges: added new package (#5697)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:45:03 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						c93ecda872
					 | 
					
						
						
							
							r-futile-options: created new package (#5699)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:43:53 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						4af446d7f4
					 | 
					
						
						
							
							r-lambda-r: created new package (#5700)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:43:33 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						f8db73d567
					 | 
					
						
						
							
							r-futile-logger: created new package (#5701)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:43:15 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						01e104dfcb
					 | 
					
						
						
							
							r-rsamtools: created new package (#5702)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:42:55 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						670463e95a
					 | 
					
						
						
							
							r-biocparallel: created new package (#5703)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:42:25 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						e08e7af34e
					 | 
					
						
						
							
							r-delayedarray: created new package (#5704)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:42:04 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Yifan Zhu
							
						 
					 | 
					
						
						
							
						
						9a2ef4c4b3
					 | 
					
						
						
							
							r-biomart: added versioned dependency on r (#5666)
						
						
						
						
						
						
					 | 
					
						2017-10-11 19:41:08 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								George Hartzell
							
						 
					 | 
					
						
						
							
						
						124bdfb910
					 | 
					
						
						
							
							Strelka depends on boost 1.56.0 *or newer* (#5690)
						
						
						
						
						
						
						
						Relax/correct the constraint on the version of boost used
by Strelka to match the docs. 
						
						
					 | 
					
						2017-10-11 17:21:26 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Denis Davydov
							
						 
					 | 
					
						
						
							
						
						35a62f715b
					 | 
					
						
						
							
							dealii: minor fixes (#5687)
						
						
						
						
						
						
						
						* dealii: fix minor bug in Assimp config
* dealii: request sundials without pthreads 
						
						
					 | 
					
						2017-10-11 15:09:39 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 | 
				
			
				
					
						
							
							
								 
								Christoph Junghans
							
						 
					 | 
					
						
						
							
						
						cfc13dec9f
					 | 
					
						
						
							
							Add a bundle package for the ECP proxy applications suite (#5689)
						
						
						
						
						
						
						
						* Add a bundle package for the ECP proxy applications suite
* Update package.py 
						
						
					 | 
					
						2017-10-11 13:39:30 -06:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
					 |