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Author SHA1 Message Date
Jim Galarowicz
8c82834ca2 Remove extra unnecessary routine to adjust build arguments. Fix if-else clause issue. 2017-07-19 18:52:30 -05:00
Jim Galarowicz
eee748db33 Add dependencies for MPI to be passed to cbtf-krell, so it can build the MPI collectors requested by the builder of openspeedshop. 2017-07-19 11:38:30 -05:00
Jim Galarowicz
7a5e806b7a Fix new travis errors. 2017-07-19 08:58:19 -05:00
Jim Galarowicz
6646fe1b74 Add more refinements to the conversion from Package to CMakePackage. 2017-07-19 08:10:46 -05:00
Jim Galarowicz
aed2119e5c Add more changes for PR 4765. 2017-07-18 20:15:52 -05:00
Jim Galarowicz
65802c59fa Fix new travis errors. 2017-07-18 10:35:31 -05:00
Jim Galarowicz
b819a9e70e Fix new travis errors. 2017-07-18 08:34:25 -05:00
Jim Galarowicz
811557ed36 Add additional modifications for changing the krell packages from Package to CMakePackage and fixing Travis erros 2017-07-17 21:19:06 -05:00
Jim Galarowicz
6b694aecde Add more modifications for changing the krell packages from Package to CMakePackage. 2017-07-17 16:05:23 -05:00
Jim Galarowicz
eb45879c0e Add better changes for changing the krell packages from Package to CMakePackage. 2017-07-17 12:20:38 -05:00
Jim Galarowicz
1abb7ef04a Add changes for changing the krell packages from Package to CMakePackage. 2017-07-17 09:01:32 -05:00
Jim Galarowicz
e2fe863421 Fix issues with the cbtf-argonavis package.py files related to comments. 2017-07-14 14:34:11 -05:00
Jim Galarowicz
0780f39cdf Fix issues with the cbtf-argonavis build, update to use dyninst-9.3.2, fixes to openspeedshop package build. 2017-07-14 10:38:19 -05:00
Jim Galarowicz
803f4ee649 Merge remote-tracking branch 'upstream/develop' into develop 2017-07-14 09:08:24 -05:00
Denis Davydov
d929ea8102 slepc: fix download url (#4763) 2017-07-14 08:00:28 -05:00
pkondamudi
dfd56da358 New Package:XSBench (#4751) 
* New Package:XSBench

* minor changes

* replaced extend() with append()

* addressed comment.

* removed tags as per PR# 4749
 2017-07-13 22:21:30 -05:00
Patrick Gartung
f63cdc7b61 Add two python packages for editing mach-O headers. (#4725) 
* Add two python packages for editing mach-O headers. Much faster than calling otool and install_name_tool directly

* remove non-overriding function

* autopep8
 2017-07-13 22:07:22 -05:00
Audrey Thoma
3eedbd7c4e py-deeptools: new package and dependencies (#4717) 
* py-deeptools: new package and dependencies

* py-deeptools: fixing python things

* missed a fix
 2017-07-13 22:02:08 -05:00
homerdin
34aea1328a New Package: CloverLeaf3D (#4705) 
* New Package: CloverLeaf3D

* Fixed Flake8 Mistake

* Removed unnecessary check
 2017-07-13 09:22:45 -05:00
Audrey Thoma
d68aa03868 graphmap: new package (#4707) 2017-07-13 09:21:37 -05:00
Jon Rood
47fe9e7aad Adding OpenMP variant to Trilinos. Also building NetCDF with PNetCDF directly, for Trilinos. (#4687) 
* Adding OpenMP variant to Trilinos. Also building NetCDF with PNetCDF in Trilinos when necessary.

* Adding runtime error for PNetCDF variant in Trilinos when necessary. Omitting unnecessary openmp variant for Trilinos in Nalu.

* Changing variant checks to conflicts statements.

* Adding comments to Trilinos package.
 2017-07-13 09:14:15 -05:00
Audrey Thoma
bde58a319b idba: new package (#4722) 2017-07-13 08:35:22 -05:00
Audrey Thoma
c104fa233a infernal: new package (#4724) 2017-07-13 08:32:55 -05:00
Audrey Thoma
4cbe1b338f last: new package (#4729) 2017-07-13 08:26:17 -05:00
Audrey Thoma
e257ea59c2 maverick: new package (#4731) 2017-07-13 08:09:23 -05:00
George Hartzell
adcaa82b88 Add package for daligner (#4734) 2017-07-13 08:08:36 -05:00
Audrey Thoma
c7af89d8fc mcl: new package (#4732) 2017-07-13 08:03:26 -05:00
Denis Davydov
92e6616a8a dealii: workaround for concretization bug (#4735) 
* dealii: workaround for concretization bug

* trilinos: add Anasazi which got disabled recently
 2017-07-13 07:51:45 -05:00
Audrey Thoma
1ecb389dcb mitofates: new package and dependency libsvm (#4741) 2017-07-13 07:44:44 -05:00
Akhil Reddy Patlolla
5ac2020c98 Added ASPA Proxy App (#4743) 2017-07-13 07:30:01 -05:00
Christoph Junghans
a95f40f18e hpx: added new package (#4709) 2017-07-12 07:54:27 +02:00
George Hartzell
ff906faf9a Typo: submdoules -> submodules (#4716) 2017-07-12 07:48:31 +02:00
Audrey Thoma
3566966d47 genometools: new package (#4706) 
* genometools: new package

* genometools: fixing perl dependency type
 2017-07-11 07:49:00 -05:00
Audrey Thoma
143d50ab67 fseq: new package (#4702) 
* fseq: new package

* fseq: fixed dependency type
 2017-07-10 18:30:24 -05:00
homerdin
5bad9dfeac New Package: MiniAMR (#4701) 
* New Package: MiniAMR

* Removed empty braces string formatting
 2017-07-10 18:30:08 -05:00
homerdin
45e731d574 New Package: HPCCG (#4693) 
* New Package: HPCCG

* Moved Run Script Install Location
 2017-07-10 12:31:41 -05:00
homerdin
c908ccecdc New Package: MiniAero (#4694) 2017-07-10 12:31:23 -05:00
Audrey Thoma
02258056fd exabayes: new pacakge (#4695) 
* exabayes: new pacakge

* exabayes: added configure arg

* exabayes: adding comments regarding compilers
 2017-07-10 12:29:59 -05:00
Audrey Thoma
1f9d6927b7 csdp: new pacakge (#4700) 2017-07-10 12:28:51 -05:00
Audrey Thoma
c80bca00ff ea-utils: new package (#4690) 
* ea-utils: new package

* ea-utils: simplifying self.spec.prefix

* ea-utils: added comment about perl

* ea-utils: fixing flake8 error
 2017-07-10 12:26:03 -05:00
EmreAtes
1abf31d3fa New package: CoMD (#4697) 
* New package: comd

* Avoid re-defining build
 2017-07-09 09:05:11 -05:00
Mike DePaulo
72aa99cb24 GCC: Add strip variant to reduce installation size (#4670) 
* gcc: Add strip variant

* gcc: Fix strip variant description being too long
 2017-07-07 22:17:52 -05:00
George Hartzell
efecefd4dd Add a package for tophat (#4698) 
Lightly tested on CentOS 7.
 2017-07-07 22:15:38 -05:00
Audrey Thoma
56b959501a fastx-toolkit: solving gcc conflict (#4696) 2017-07-07 16:53:15 -05:00
Christoph Junghans
1886b0b370 New package: quinoa (#4686) 2017-07-07 11:11:53 +02:00
homerdin
60a8b68a7e Added TeaLeaf Package (#4683) 2017-07-07 10:54:34 +02:00
Axel Huebl
46e3c2b274 Isaac Server 1.3.1: New version (#4689) 
adds a new release of isaac-server.
 2017-07-07 10:51:09 +02:00
Audrey Thoma
d64405a30f emboss: new package (#4691) 2017-07-07 10:47:26 +02:00
Axel Huebl
396e76eb7c New Packages: gearshifft, clFFT (#4560) 
Adds the `gearshifft` package, a benchmark suite for heterogeneous implementations of FFTs.
Adds clFFT, a software library containing FFT functions written in OpenCL.

see: https://github.com/clMathLibraries/clFFT
 2017-07-07 10:46:35 +02:00
Gregory Lee
28cb1e4379 patch config.guess after autoreconf step (#4604) 2017-07-06 23:07:54 -05:00