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Author SHA1 Message Date
Gregory Lee
05ca19d9d7 fgfs: fix missing autotools depends_on (#26005) 
* added build deps for fgfs

* added build deps when building master branch
 2021-09-21 07:40:59 -04:00
Harmen Stoppels
a326713826 py-abcpy: new package (#25713) 2021-09-21 13:10:16 +02:00
bernhardkaindl
1b95c97bb3 ccfits: add v2.6 (#26089) 
ccfits@2.5 doesn't compile on Ubuntu 18.04: Update to version 2.6.
 2021-09-21 04:43:48 -06:00
bernhardkaindl
c6a33c28de Fix deps of diffmark,faiss,fgsl,fipcheck,nbdkit,ncbi-magicblast,xcb-util-cursor (#26091) 
Fix missing type='build' deps for cpio, m4, pkg-config and python in
diffmark, faiss, fgsl, fipcheck, nbdkit, ncbi-magicblast and xcb-util-cursor
 2021-09-21 04:16:43 -06:00
Harmen Stoppels
58663692a4 Rename 'variant_name' to 'variant' and document it in autotools build system (#26064) 2021-09-21 11:27:41 +02:00
Christoph Junghans
45ba4d94bd votca-* packages: add version 2021.2 (#26058) 2021-09-20 16:14:19 -07:00
Adam J. Stewart
3e3b7b1394 New package: py-torchgeo (#26059) 2021-09-20 16:12:55 -07:00
Jordan Ogas
d0fd9e6d5f charliecloud package: add version 0.25 (#26073) 2021-09-20 16:08:41 -07:00
adityakavalur
88880c5369 Include newer versions of UCX (#26072) 2021-09-20 23:41:26 +02:00
Danny McClanahan
aa7e354a3a patch serf and scons to use #!/usr/bin/env python3 (#26062) 2021-09-20 22:12:30 +02:00
iarspider
f3d2f62468 Add variants to FORM recipe (#25963) 2021-09-20 13:53:54 -06:00
Edward Hartnett
65f285831e added NOAA maintainers to ip package (#26055) 2021-09-20 11:36:03 -06:00
Olivier Cessenat
0197b364a2 mfem and petsc: alter hypre dependencies (#25902) 
Hypre latest version 2.22.1 breaks MFEM and PETSc.
 2021-09-20 09:51:29 -07:00
Edward Hartnett
96eefea9a3 added NOAA software team to maintainers list (#26056) 2021-09-20 09:01:53 -06:00
Olivier Cessenat
1ea58e0cb9 p7zip: resolve gcc 10 conflict (#25676) 
Fix credit: Eric Brugger
 2021-09-20 07:43:07 -04:00
Tamara Dahlgren
c6f9e9baf6 strumpack: Update stand-alone test to use stage directory (#25751) 2021-09-20 07:36:58 -04:00
kjrstory
430caaf5f6 paraview: patch for version 5.9.1 with gcc 11.1.0 (#25887) 
* paraview: patch for version 5.9.1 with gcc 11.1.0

* Fix : blank line contains whitespace
 2021-09-20 07:31:54 -04:00
Robert Underwood
6476e0cf02 gdb: new version v11.1 (#25920) 2021-09-20 07:30:37 -04:00
Jen Herting
acd4186a88 New packages: py-imgaug (#25894) 
* updates from sid

* [py-imgaug] url -> pypi

* [py-imgaug] added version 0.4.0 and fixed up dependencies

* [py-imgaug] updated copyright

Co-authored-by: Andrew Elble <aweits@rit.edu>
 2021-09-20 07:29:43 -04:00
iarspider
ca8d16c9d1 Allow setting variant name in AutotoolsPackage._activate_or_not (#26054) 2021-09-20 10:54:24 +02:00
jacorvar
d20fa421ca Fix R version (#26061) 
R version should be `3.0.0` instead of `3.00`.
 2021-09-20 10:47:40 +02:00
Edward Hartnett
8fceaf4a33 added NOAA software team to maintainers list (#26057) 2021-09-19 19:02:02 -06:00
Vanessasaurus
534bad0ff7 updating OmegaH to 9.34.1 (#26015) 2021-09-19 08:55:54 -06:00
Todd Gamblin
4f8b643404 Create SECURITY.md 2021-09-19 06:43:14 -07:00
Vanessasaurus
c2f42a6f09 updating kokkos to 3.4.01 (#26013) 2021-09-19 06:10:55 -06:00
Vanessasaurus
148c7aeb06 updating singularity to 3.8.3 (#26020) 
Signed-off-by: vsoch <vsoch@users.noreply.github.com>

Co-authored-by: vsoch <vsoch@users.noreply.github.com>
 2021-09-19 04:20:15 -06:00
jacorvar
4f79a83dd1 Fix R version (#26047) 
R version should be `3.0.0`, in contrast to `3.00`.
 2021-09-19 12:14:14 +02:00
Alec Scott
2d4d51eb5e Add v1.6.0 to Benchmark (#25996) 2021-09-18 20:59:02 -06:00
Cameron Smith
b14d6d217e omegah: add version 9.34.1 (#25828) 2021-09-18 19:58:44 -06:00
Alec Scott
5b400a69b7 Add v0.935 to Angsd (#25995) 2021-09-18 18:46:55 -06:00
Adam J. Stewart
c0839b14d5 Python: use platform-specific site packages dir (#25998) 2021-09-19 00:37:50 +00:00
Seth R. Johnson
6ff5795342 cmake: allow gcc on macOS for newer versions (#25994) 2021-09-18 17:34:43 -06:00
Michele Martone
60f0d0ac20 librsb: add v1.2.0.10 (#26044) 2021-09-18 17:43:41 -04:00
Axel Huebl
8f3482b2ce FFTW: Fix OpenMP Build on macOS (#26039) 2021-09-18 15:13:47 -06:00
Vanessasaurus
fc79a5da17 updating siesta to 4.0.2 (#26021) 2021-09-18 08:05:02 -06:00
Vanessasaurus
1880db8457 updating universal ctags to 5.2.0.xxxx (#26024) 2021-09-18 07:13:55 -06:00
Vanessasaurus
6538727fb3 updating sparsehash to 2.0.4 (#26023) 2021-09-18 06:52:59 -06:00
Vanessasaurus
f5275fecc5 updating htslib to 1.13 (#26012) 2021-09-18 06:26:00 -06:00
Vanessasaurus
d499309433 updating nco to 5.0.1 (#26014) 2021-09-18 06:23:05 -06:00
Vanessasaurus
c5e2662dea updating graphviz to 2.49.0 (#26011) 2021-09-18 06:19:56 -06:00
Vanessasaurus
7b0a505795 updating veloc to 1.5 and cleaning up spacing (#26025) 2021-09-18 06:10:56 -06:00
Vanessasaurus
e8b86b7ec6 updating cloc to 1.9.0 (#26009) 2021-09-18 05:44:04 -06:00
Vanessasaurus
608a0b1f8f updating poppler (#26016) 2021-09-18 05:10:56 -06:00
Vanessasaurus
abd11cf042 updating raxml to 8.2.12 (#26018) 2021-09-18 04:58:50 -06:00
Vanessasaurus
8ad910d8f1 updating protobuf (Gooooogle!) to 3.18.0 (#26017) 2021-09-18 04:40:49 -06:00
Vanessasaurus
d5c985b888 updating samtools to 1.13 (#26019) 2021-09-18 04:16:51 -06:00
Vanessasaurus
f0443d0327 updating spades to 3.15.3 (#26022) 2021-09-18 03:46:50 -06:00
Vanessasaurus
9af1858bff updating gatk to 4.2.2.0 (#26010) 2021-09-18 10:07:28 +02:00
David Beckingsale
fa3265ea51 Convert RAJA, CHAI and Umpire to CachedCMakePackages (#25788) 
* Switch Umpire to CMakeCachedPackage
* Fix missing import
* Correct tests option in Umpire
* Switch RAJA to CachedCMakePackage
* Convert CHAI to CachedCMakePackage
* Corrections in RAJA
* Patches in Umpire & RAJA for BLT target export
* Fixup style
* Fixup incorrect use of cmake_cache_string
 2021-09-17 21:29:41 -07:00
Chris White
79ac572f21 update tutorial version of hdf5 (#25368) 2021-09-17 17:34:56 -07:00