Harmen Stoppels
a7e57c9a14
py-opt-einsum: add v3.4.0 ( #47759 )
2024-11-24 08:40:29 +01:00
Teague Sterling
85d83f9c26
duckdb: add v1.1.3, deprecate <v1.1.0 ( #47653 )
...
* duckdb: add v1.0.0, v0.10.3
* Adding issue reference
* Adding issue reference
* duckdb: add v1.1.0
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
* Fixing styles
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
* duckdb: add v1.1.1
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
* duckdb: Fix missing depends_on(unixodbc, when=+odbc)
* Adding duckdb variants, removing old variants, removing deprecated versions
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
* duckdb+static_openssl: Add pkgconfig and zlib-api to link zlib when needed
* duckdb: add v1.1.3
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
* Update package.py for CVE-2024-41672 as suggested
* [@spackbot] updating style on behalf of teaguesterling
* duckdb: add CVE comment before deprecated versions
---------
Signed-off-by: Teague Sterling <teaguesterling@gmail.com >
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com >
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com >
2024-11-23 13:13:40 -07:00
finkandreas
39a081d7fd
Kokkos complex_align variant, Trilinos+PETSc enforcement for Kokkos~complex_align ( #47686 )
2024-11-23 07:45:22 -07:00
Harmen Stoppels
71b65bb424
py-opt-einsum: missing forward compat bound for python ( #47757 )
2024-11-23 10:48:07 +01:00
Adam J. Stewart
3dcbd118df
py-cython: support Python 3.12+ ( #47714 )
...
and add various other compat bounds on dependents
2024-11-22 22:20:41 +01:00
Harmen Stoppels
5dacb774f6
itk: use vendored googletest ( #47687 )
...
external googletest breaks dependents because they end up with
ITK_LIBRARIES set to `GTest::GTest;GTest::Main`, which then end up
literally in a nonsensical link line `-lGTest::GtTest`.
the vendored googletest produces a cmake config file where
`ITKGoogleTest_LIBRARIES` is empty.
2024-11-22 18:41:23 +01:00
Harmen Stoppels
cb3d6549c9
traverse.py: ensure topo order is bfs for trees ( #47720 )
2024-11-22 15:04:19 +01:00
Mark Abraham
559c2f1eb9
gromacs: oneapi does not always require gcc ( #47679 )
...
* gromacs: oneapi does not always require gcc
* Support intel_provided_gcc only with %intel classic compiler
Require gcc only when needed with %intel
* New approach depending on gcc-runtime directly
* Update var/spack/repos/builtin/packages/gromacs/package.py
Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com >
---------
Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com >
2024-11-22 06:33:30 -07:00
Harmen Stoppels
ed1dbea77b
eigen: self.builder.build_directory -> self.build_directory ( #47728 )
2024-11-22 07:20:38 +01:00
Seth R. Johnson
6ebafe4631
vecgeom: add v1.2.10 and delete unused, deprecated versions ( #47725 )
...
* vecgeom: add v1.2.10
* Remove unused+deprecated versions of vecgeom
* Deprecate older v1.2.x versions
* [@spackbot] updating style on behalf of sethrj
2024-11-21 17:03:09 -07:00
Harmen Stoppels
7f0bb7147d
README.md update old tutorial URL ( #47718 )
2024-11-21 16:46:46 +01:00
Satish Balay
f41b38e93d
xsdk: add v1.1.0 ( #47635 )
...
xsdk: exclude pflotran, alquimia, exago
heffte: ~fftw when=+hip
dealii: ~sundials ~opencascade ~vtk ~taskflow
2024-11-21 08:08:27 -06:00
Massimiliano Culpo
5fd12b7bea
Add further missing C, C++ dependencies to packages ( #47662 )
2024-11-21 14:49:12 +01:00
Mikael Simberg
fe746bdebb
aws-ofi-nccl: Add 1.8.1 to 1.13.0 ( #47717 )
2024-11-21 05:37:57 -07:00
eugeneswalker
453af4b9f7
hdf5-vol-cache %cce: add -Wno-error=incompatible-function-pointer-types ( #47698 )
2024-11-20 14:56:19 -08:00
eugeneswalker
29cf1559cc
netlib-scalapack %cce: add cflags -Wno-error=implicit-function-declaration ( #47701 )
2024-11-20 15:09:14 -07:00
eugeneswalker
a9b3e1670b
mpifileutils%cce: append cflags -Wno-error=implicit-function-declaration ( #47700 )
2024-11-20 14:19:05 -07:00
kwryankrattiger
4f9aa6004b
visit: add v3.4.0, v3.4.1 ( #47161 )
...
* Visit: Add new versions 3.4.0 and 3.4.1
* Adios2: Restrict python, 3.11 doesn't not work for older Adios2
* VisIt: Set the VTK_VERSION for @3.4:
Older versions of VTK used the VTK_{MAJOR, MINOR}_VERSION variables for
VTK detection. VisIt >= 3.4 uses the full string VTK_VERSION.
* CI: Don't build llvm-amdgpu for non-HIP stack
* VisIt: v3.4.1 handles newer Adios2 correctly
* Visit: Add missing links in HDF5, set correct VTK version configuration parameter
* VisIt: Add py-pip requirement and patch visit with configuration changes
* HDF5 symlinks move when inside of callback
* VisIt ninja install fails with python module. Using make does not
* VisIt 3.4 has a high minimum cmake requirement
* HDF5: Early return when not mpi for mpi symlinks
* HDF5: Use platform agnostic method for creating legacy compatible MPI symlinks
* Fix VISIT_VTK_VERSION handling for 8.2.1a hack
2024-11-20 18:37:56 +01:00
Harmen Stoppels
aa2c18e4df
spack style: import-check -> import, fix bugs, exclude spack.pkg ( #47690 )
2024-11-20 16:15:28 +01:00
dependabot[bot]
0ff3e86315
build(deps): bump codecov/codecov-action from 5.0.2 to 5.0.3 ( #47683 )
...
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action ) from 5.0.2 to 5.0.3.
- [Release notes](https://github.com/codecov/codecov-action/releases )
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md )
- [Commits](5c47607acb...05f5a9cfadsupport@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-11-19 20:40:01 -06:00
dependabot[bot]
df208c1095
build(deps): bump docker/metadata-action from 5.5.1 to 5.6.1 ( #47682 )
...
Bumps [docker/metadata-action](https://github.com/docker/metadata-action ) from 5.5.1 to 5.6.1.
- [Release notes](https://github.com/docker/metadata-action/releases )
- [Commits](8e5442c4ef...369eb591f4support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-11-19 20:39:45 -06:00
Chris Marsh
853f70edc8
cgal: update depends versions for 6.0.1 ( #47516 )
...
* This extends PR #47285 to properly include some of the required version constrains of cgal 6 incl C++ standard. It also adds the new no-gmp backend as a variant.
* fix style
* disable cgal@6 +demo variant as the demos require qt6 which is not in spack
* disable the gmp variant until clarity on how its supposed to work is provided. bound shared and header_only variants to relevant versions
* Fix missing msvc compiler limit, fix variant left in
* Add more comments. Better describe the gmp variant. Remove testing code
* fix style
2024-11-19 16:43:21 -07:00
Paul R. C. Kent
50970f866e
Add llvm v19.1.4 ( #47681 )
2024-11-19 16:03:28 -07:00
Wouter Deconinck
8821300985
py-gevent: add v24.2.1, v24.10.3, v24.11.1 ( #47646 )
...
* py-gevent: add v24.2.1, v24.10.3
* py-gevent: add v24.11.1
2024-11-19 12:14:52 -08:00
AMD Toolchain Support
adc8e1d996
Restrict disable dynamic thread scaling only to 3.1 version ( #47673 )
...
Co-authored-by: vijay kallesh <Vijay-teekinavar.Kallesh@amd.com >
2024-11-19 12:12:21 -08:00
Andrey Perestoronin
1e0aac6ac3
Add new 2025.0.1 Oneapi patch packages ( #47678 )
2024-11-19 11:38:42 -07:00
Harmen Stoppels
99e2313d81
openturns: fix deps ( #47669 )
2024-11-19 18:13:47 +01:00
Mark Abraham
22690a7576
Make oneAPI library-with-sdk specialize library class ( #47632 )
2024-11-19 12:12:10 -05:00
Harmen Stoppels
5325cfe865
systemd: symlink the internal libraries so they are found in rpath ( #47667 )
2024-11-19 15:28:49 +01:00
Harmen Stoppels
5333925dd7
sensei: fix install rpath for python extension ( #47670 )
2024-11-19 15:23:54 +01:00
Massimiliano Culpo
2db99e1ff6
gmp: fix cxx dependency, remove dependency on fortran ( #47671 )
2024-11-19 15:19:08 +01:00
Massimiliano Culpo
68aa712a3e
solver: add a timeout handle for users ( #47661 )
...
This PR adds a configuration setting to allow setting time limits for concretization.
For backward compatibility, the default is to set no time limit.
2024-11-19 15:00:26 +01:00
Mikael Simberg
2e71bc640c
pika: Add 0.30.1 ( #47666 )
2024-11-19 05:44:41 -07:00
Dom Heinzeller
661f3621a7
netcdf-cxx: add a maintainer ( #47665 )
2024-11-19 05:28:38 -07:00
Massimiliano Culpo
f182032337
Restore message when concretizing in parallel ( #47663 )
...
It was lost in #44843
2024-11-19 12:28:14 +00:00
teddy
066666b7b1
py-non-regression-test-tools: add v1.1.6 & remove v1.1.2 (tag removed) ( #47622 )
...
* py-non-regression-test-tools: add v1.1.6 & remove v1.1.2 (tag removed)
* Update var/spack/repos/builtin/packages/py-non-regression-test-tools/package.py
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com >
---------
Co-authored-by: t. chantrait <teddy.chantrait@cea.fr >
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com >
2024-11-19 04:38:33 -07:00
Richard Berger
73316c3e28
cached_cmake: mpifc is not always defined ( #46861 )
...
* cached_cmake: mpifc is not always defined
* mpich: only depend on fortran when +fortran
2024-11-18 14:49:56 -08:00
afzpatel
c8e4ae08da
eigen: enable ROCm support and add master version ( #47332 )
...
* eigen: enable ROCm support and add master version
* change boost dependency to only for tests
2024-11-18 14:41:02 -08:00
Tom Scogland
44225caade
llvm: fix sysroot and build on darwin ( #47336 )
...
The default build of clang on darwin couldn't actually build anything
because of a lack of a sysroot built in. Also several compilation
errors finding the system libc++ cropped up, much like those in GCC, and
have been fixed.
2024-11-18 14:39:16 -08:00
Lydéric Debusschère
8d325d3e30
yambo: add v5.2.3, v5.2.4 ( #47350 )
...
* packages: Update 'yambo'
* add call to 'resource' method to download Ydriver and iotk during fetch instead of during build
* air-gapped installation could be performed since version 5.2.1
* add versions 5.2.3 and 5.2.4
* remove some inexistant configure options for versions "@5:"
* add a sanity_check on 'bin/yambo'
2024-11-18 14:36:16 -08:00
Mosè Giordano
d0fd112006
grep: add executables attribute and determine_version method ( #47438 )
2024-11-18 14:30:46 -08:00
Wouter Deconinck
50f43ca71d
py-gitpython: add v3.1.43 (fix CVEs) ( #47444 )
...
* py-gitpython: add v3.1.43
2024-11-18 14:24:20 -08:00
Vanessasaurus
2546fb6afa
Automated deployment to update package flux-sched 2024-11-05 ( #47449 )
...
Co-authored-by: github-actions <github-actions@users.noreply.github.com >
2024-11-18 14:23:35 -08:00
Vanessasaurus
10f6863d91
Automated deployment to update package flux-security 2024-11-05 ( #47450 )
...
Co-authored-by: github-actions <github-actions@users.noreply.github.com >
2024-11-18 14:21:42 -08:00
afzpatel
63ea528606
mivisionx, migraphx and rocal: add and fix tests ( #47453 )
...
* fix mivisionx test, add migraphx build-time test and add rocal unit test
* fix miopen-hip linking issue
* remove setup_run_environment from roctracer-dev
* change patch file
2024-11-18 14:09:18 -08:00
snehring
89d2b9553d
tb-lmto: new package ( #47482 )
...
* tb-lmto: adding new package tb-lmto
* tb-lmto: update copyright year
2024-11-18 14:01:59 -08:00
Dom Heinzeller
278326b4d9
Add py-phdf@0.11.4 and add conflict for py-pyhdf@0.10.4 with numpy@1.25: ( #47656 )
2024-11-18 13:53:38 -08:00
alvaro-sch
43c1a5e0ec
orca: add v6.0.1, avx2-6.0.1 ( #47489 )
...
* orca: add 6.0.1 versions
* orca: checksum fix for avx2-6.0.1
* orca: fix version string for avx2-6.0.1
* orca: checksum fix for 6.0.1
2024-11-18 13:34:38 -08:00
Paul Gessinger
8feb506b3a
geomodel: Fix dependencies ( #47437 )
...
* geomodel: Add dependency on `hdf5` for `+pythia`, require `hdf5+cxx`
* fix visualization dependencies
* geomodel: Add soqt dependency
* update dependency on soqt to drop explicit qt variant
2024-11-18 15:31:53 -06:00
Wouter Deconinck
627544191a
py-pymongo: add v4.10.1 (fix CVE) ( #47501 )
...
* py-pymongo: add v4.10.1
* py-pymongo: fix copyright header spacing
* py-hatch-requirements-txt: add v0.4.1
---------
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com >
2024-11-18 12:53:32 -08:00
