* gptune: new test API
* gptune: cleanup; finish API changes; separate unrelated test parts
* gptune: standalone test cleanup with timeout constraints
* gptune: ensure stand-alone test bash failures terminate; enable in CI
* gptune: add directory to terminate_bash_failures
* gptune/stand-alone tests: use satisifes for checking variants
---------
Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
Spack can now bootstrap two new dependencies on Windows: GnuPG, and file.
These dependencies are modeled as a separate package, and they install a cross-compiled binary.
Details on how they binaries are built are in https://github.com/spack/windows-bootstrap-resources
* WarpX: Python on pyAMReX
Long overdue update for WarpX: in 2024, we updated our Python
bindings to rely on the new pyAMReX package. This deprecates the old
`py-warpx` package and adds a new dependency and variant to WarpX.
Also deprecates old versions that we will not continue to support.
* Update Cloud/E4S Pipelines for WarpX
`py-warpx` is replaced by `warpx +python`
oneAPI does not support IPO/LTO: diable for `py-amrex` even though
pybind11 strongly encourages it.
"spack buildcache push" for partially installed environments pushes all it
can by default, and only dumps errors towards the end.
If --fail-fast is provided, error out before pushing anything if any
of the packages is uninstalled
oci build caches using parallel push now use futures to ensure pushing
goes in best-effort style.
The old concretizer is still used to bootstrap clingo from source. If we switch to a DAG model
where compilers are treated as nodes, we need to either:
1. fix the old concretizer to support this (which is a lot of work and possibly research), or
2. bootstrap `clingo` without the old concretizer.
This PR takes the second approach and gets rid of the old concretizer code. To bootstrap
`clingo`, we store some concrete spec prototypes as JSON, select one according to the
coarse-grained system architecture, and tweak them according to the current host.
The old concretizer and related dead code are removed. In particular, this removes
`Spec.normalize()` and related methods, which were used in many unit-tests to set
up the test context. The tests have been updated not to use `normalize()`.
- [x] Bootstrap clingo concretization based on a JSON file
- [x] Bootstrap clingo *before* patchelf
- [x] Remove any use of the old concretizer, including:
* Remove only_clingo and only_original fixtures
* Remove _old_concretize and _new_concretize
* Remove _concretize_together_old
* Remove _concretize_together_new
* Remove any use of `SPACK_TEST_SOLVER`
* Simplify CI jobs
- [x] ensure bootstrapping `clingo` works on on Darwin and Windows
- [x] Raise an intelligible error when a compiler is missing
- [x] Ensure bootstrapping works on FreeBSD
- [x] remove normalize and related methods
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
`setup-env.sh` is meant to be sourced, not executed directly.
By revoking execution permissions, users who accidentally execute
the script will receive an error instead of seeing no effect.
* Remove execution permission from `setup-env.sh` and friends
* Don't make output file executable in `spack commands --update-completion`
---------
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
* e4s ci: enable some disabled specs
* comment out cp2k +cuda due to unsupported cuda_arch
* comment out dealii+cuda due to concretize error
* work through concretize errors
* e4s: comment out failing builds
* e4s stack: disabled non-building specs
* comment out failing specs
* comment out failing specs
* cleanup comments
Add language dependencies `c`, `cxx`, and `fortran`.
These `depends_on` statements are auto-generated based on file extensions found
in source tarballs/zipfiles.
The `# generated` comment can be removed by package maintainers after
validating correctness.
Originally if you had `x -> y -> z`, and an env with `x` in its speclist that is concretized but not installed, then `spack find -c y` would not show anything. This was intended: `spack find` has up-until-now only ever listed out installed specs (and `-c` was for adding a preamble section about roots).
This changes `spack find` so:
* `-c` makes it search through all concretized specs in the env (in a sense it is anticipated that a concretized environment would serve as a "speculative" DB and users may want to query it like they query the DB outside of envs)
* Adds a `-i/--install-status` option, equivalent to `-I` from `spack spec`
* Shows install status for either `-c` or `-i`
* As a side effect to prior point, `spack find -i` can now distinguish different installation states (upstream/external)
Examples:
```
$ spack find -r
==> In environment findtest
==> 1 root specs
- raja
==> 6 installed packages (not shown)
==> 12 concretized packages to be installed (not shown)
```
```
$ spack find
==> In environment findtest
==> 1 root specs
- raja
-- darwin-ventura-m1 / apple-clang@14.0.3 -----------------------
berkeley-db@18.1.40 bzip2@1.0.8 diffutils@3.10 gmake@4.4.1 gnuconfig@2022-09-17 libiconv@1.17
==> 6 installed packages
==> 12 concretized packages to be installed (show with `spack find -c`)
```
```
$ spack find -c
==> In environment findtest
==> 1 root specs
- raja
-- darwin-ventura-m1 / apple-clang@14.0.3 -----------------------
[+] berkeley-db@18.1.40 [+] bzip2@1.0.8 - cmake@3.29.4 [+] diffutils@3.10 [+] gmake@4.4.1 [+] libiconv@1.17 - nghttp2@1.62.0 - pkgconf@2.2.0 - readline@8.2
- blt@0.6.2 - camp@2024.02.1 - curl@8.7.1 - gdbm@1.23 [+] gnuconfig@2022-09-17 - ncurses@6.5 - perl@5.38.2 - raja@2024.02.2 - zlib-ng@2.1.6
==> 6 installed packages
==> 12 concretized packages to be installed
```
$ spack -E find
...
==> 82 installed packages
```
* update e4s stacks
* adios2 +rocm: disable kokkos due to spack issue #44832
* comment out mgard+cuda due to spack issue #44833
* comment out cabana, legion, arborx due to kokkos spack issue #44832
* comment out slepc, petsc due to petsc spack issue #44600
* comment out adios2+rocm due to kokkos rocm spack issue #44832
* comment out kokkos due to spack issue #44832
