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Author SHA1 Message Date
Massimiliano Culpo
b58a52b6ce
abinit: update to use oneapi packages (#49301) 
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2025-03-05 13:44:01 -05:00
Chris White
32760e2885
sundials: expand patch when rule (#49296) 2025-03-05 16:13:19 +01:00
Harmen Stoppels
125feb125c
Define Package API version (#49274) 
Defines `spack.package_api_version` and `spack.min_package_api_version` 
as tuples (major, minor). 

This defines resp. the current Package API version implemented by this version 
of Spack and the minimal Package API version it is backwards compatible with.

Repositories can optionally define:
```yaml
repo:
    namespace: my_repo
    api: v1.2
```
which indicates they are compatible with versions of Spack that implement 
Package API `>= 1.2` and `< 2.0`. When the `api` key is omitted, the default 
`v1.0` is assumed.
 2025-03-05 15:42:48 +01:00
Wouter Deconinck
8677063142
QtPackage: modify QT_ADDITIONAL_PACKAGES_PREFIX_PATH handling (#49297) 
* QtPackage: mv QT_ADDITIONAL_PACKAGES_PREFIX_PATH handling

* geomodel: support Qt6

* qt-base: rm import re
 2025-03-05 09:09:32 -05:00
Massimiliano Culpo
f015b18230
hydrogen: update to use oneapi packages (#49293) 
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2025-03-05 09:06:32 +01:00
Massimiliano Culpo
aa9e610fa6
elemental: remove deprecated package (#49291) 
This package has not been maintained since 2016.

We maintain an active fork in the hydrogen
package, so remove this one.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2025-03-05 08:36:05 +01:00
Wouter Deconinck
7d62045c30
py-networkx: add up to v3.4.2 (#49289) 
* py-networkx: add new versions up to 3.4.2
* py-networkx: add more requirements
* py-networkx: fix typo
* py-networkx: fix python and py-setuptools dependencies

---------

Co-authored-by: Joseph C Wang <joequant@gmail.com>
 2025-03-04 17:02:54 -08:00
Chris Marsh
5b03173b99
r-packages: add missing gettext dependencies (#48910) 
* add gettext dependency

* typo

* style
 2025-03-04 17:07:01 -06:00
mvlopri
36fcdb8cfa
Update the incorrect sha for the SEACAS package.py (#49292) 
The sha256sum for the 2025-02-27 version of SEACAS is incorrect
due to the movement of the tagged version.
 2025-03-04 16:03:28 -07:00
Chris Marsh
7d5b17fbf2
py-rpy2: Add 3.5.17 (#48911) 
* Update rpy2 to newest version and clean up package

* Add me as maintainer

* Update depends section as per review. Add ipython variant. Fix some ranges and add support for python 3.9. Deprecated outdated versions

* refine depends_on and remove redundant version info

* style
 2025-03-04 15:58:12 -07:00
Piotr Sacharuk
d6e3292955
flux-sched: Apply workarounds for oneAPI compiler for problem with build (#49282) 2025-03-04 15:28:33 -07:00
Chris Marsh
60f54df964
Explicitly depend on gettext for libintl (#48908) 2025-03-04 16:25:31 -06:00
Wouter Deconinck
487df807cc
veccore: add typo fix for clang (#49288) 
* veccore: add typo for clang

* veccore: apply ScalarWrapper.h patch for all compilers

---------

Co-authored-by: Joseph C Wang <joequant@gmail.com>
 2025-03-04 14:35:47 -07:00
Zack Galbreath
cacdf84964
ci: add support for high priority local mirror (#49264) 2025-03-04 14:47:37 -06:00
fbrechin
e2293c758f
Adding ability for repo paths from a manifest file to be expanded when creating an environment. (#49084) 
* Adding ability for repo paths from a manifest file to be expanded when creating an environment.

A unit test was added to check that an environment variable will be expanded.
Also, a bug was fixed in the expansion of develop paths where if an environment variable
was in the path that then produced an absolute path the path would not be extended.

* Fixing new unit test for env repo var substitution

* Adding ability for repo paths from a manifest file to be expanded when creating an environment.

A unit test was added to check that an environment variable will be expanded.
Also, a bug was fixed in the expansion of develop paths where if an environment variable
was in the path that then produced an absolute path the path would not be extended.

* Messed up resolving last rebase
 2025-03-04 09:52:28 -08:00
Harmen Stoppels
f5a275adf5
gitignore: remove *_archive (#49278) 2025-03-04 18:37:18 +01:00
Paul
615ced32cd
protobuf: add v3.29.3 (#49246) 2025-03-04 11:29:53 -06:00
Massimiliano Culpo
bc04d963e5
Remove debug print statements in unit-tests (#49280) 
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2025-03-04 18:29:45 +01:00
Taillefumier Mathieu
11051ce5c7
CP2K: Add GRPP support (#49232) 2025-03-04 06:54:27 -07:00
Adam J. Stewart
631bddc52e
py-pyarrow: add v19.0.1 (#49149) 
* py-pyarrow: add v19.0.1

* Environment variables no longer needed either

* Remove py-pyarrow variants
 2025-03-04 13:20:52 +01:00
Adam J. Stewart
b5f40aa7fb
OpenCV: fix +cuda build (#49146) 2025-03-04 13:19:57 +01:00
Adam J. Stewart
57e0798af2
py-pip: mark Python 3.12+ support (#49148) 2025-03-04 13:18:38 +01:00
Chris White
0161b662f7
conduit: do not pass link flags to ar (#49263) 2025-03-03 19:53:11 -07:00
afzpatel
aa55b19680
fix +asan in ROCm packages (#48745) 
* fix asan for hsa-rocr-dev
* add libclang_rt.asan-x86_64.so to LD_LIBRARY_PATH
* fix +asan for hipsparselt
* fix rocm-openmp-extras asan and add rccl +asan support
* add missing comgr build env variables
* add missing rocm-smi-lib build env variables
* minor dependency change
* fix style
 2025-03-03 17:57:34 -08:00
dependabot[bot]
8cfffd88fa
build(deps): bump pytest from 8.3.4 to 8.3.5 in /lib/spack/docs (#49268) 
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.3.4 to 8.3.5.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](https://github.com/pytest-dev/pytest/compare/8.3.4...8.3.5)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2025-03-03 19:18:42 -06:00
dependabot[bot]
2f8dcb8097
build(deps): bump python-levenshtein in /lib/spack/docs (#49269) 
Bumps [python-levenshtein](https://github.com/rapidfuzz/python-Levenshtein) from 0.26.1 to 0.27.1.
- [Release notes](https://github.com/rapidfuzz/python-Levenshtein/releases)
- [Changelog](https://github.com/rapidfuzz/python-Levenshtein/blob/main/HISTORY.md)
- [Commits](https://github.com/rapidfuzz/python-Levenshtein/compare/v0.26.1...v0.27.1)

---
updated-dependencies:
- dependency-name: python-levenshtein
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2025-03-03 19:17:48 -06:00
dependabot[bot]
5b70fa8cc8
build(deps): bump sphinx from 8.2.1 to 8.2.3 in /lib/spack/docs (#49270) 
Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 8.2.1 to 8.2.3.
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst)
- [Commits](https://github.com/sphinx-doc/sphinx/compare/v8.2.1...v8.2.3)

---
updated-dependencies:
- dependency-name: sphinx
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2025-03-03 19:17:08 -06:00
Adam J. Stewart
b4025e89ed
py-torchmetrics: add v1.6.2 (#49262) 2025-03-03 19:15:49 -06:00
Eric Berquist
8db74e1b2f
tmux: add 3.5a, 3.5, and 3.3 (#49259) 
* tmux: add 3.5a, 3.5, and 3.3

* tmux: patch is in releases from 3.5 onward

* tmux: versions 3.5 and newer can use jemalloc
 2025-03-03 19:12:45 -06:00
Wouter Deconinck
1fcfbadba7
qwt: add v6.2.0, v6.3.0, support Qt6 (#45604) 
* qwt: support building against Qt6

* qwt: fix style

* qwt: depends_on qt-base+opengl+widgets when +opengl

* visit: patch for missing cmath include

---------

Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
 2025-03-03 16:25:48 -08:00
Chris White
13ec35873f
Axom: Changes from Axom repository (#49183) 
* pull in new changes from axom project

* add new versions

* convert more conditionals to spec.satisfies

-------------
Co-authored-by: white238 <white238@users.noreply.github.com>
 2025-03-03 15:47:45 -08:00
Philip Fackler
f96b6eac2b
xolotl: new package (#48876) 
* Adding xolotl package

* [@spackbot] updating style on behalf of PhilipFackler

* Removing redundant text

* Add blank line

* Update var/spack/repos/builtin/packages/xolotl/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* Update var/spack/repos/builtin/packages/xolotl/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* Switch to CudaPackage and remove source dir from runtime env

* [@spackbot] updating style on behalf of PhilipFackler

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
 2025-03-03 15:18:28 -06:00
Rocco Meli
933a1a5cd9
update (#49261) 2025-03-03 10:38:10 -07:00
Stephen Nicholas Swatman
b2b9914efc
acts dependencies: new versions as of 2025/03/03 (#49253) 
This commit adds ACTS version 39.2.0 and detray version 0.89.0.
 2025-03-03 09:32:59 -07:00
Rocco Meli
9ce9596981
multicharge: add v0.3.1 (#49255) 
* multicharge: add v0.3.1

* fix url
 2025-03-03 15:32:29 +01:00
Wouter Deconinck
fc30fe1f6b
librsvg: add v2.56.4, v2.57.3, v2.58.2 (#45734) 
* librsvg: add v2.56.4, v2.57.3, v2.58.2

---------

Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
 2025-03-02 14:08:43 -08:00
Paul
25a4b98359
jacamar-ci: add v0.25.0 (#49248) 2025-03-02 14:50:43 -06:00
Adam J. Stewart
05c34b7312
py-pymc3: not compatible with numpy 2 (#49225) 2025-03-01 13:43:05 -06:00
Tahmid Khan
b22842af56
globalarrays: Add variant cxx which adds the --enable-cxx flag (#49241) 2025-03-01 13:16:04 -06:00
Vanessasaurus
0bef028692
Automated deployment to update package flux-sched 2025-02-28 (#49229) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2025-03-01 08:48:41 -07:00
Vanessasaurus
935facd069
Automated deployment to update package flux-security 2025-02-28 (#49230) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2025-03-01 08:47:19 -07:00
Adam J. Stewart
87e5255bbc
py-matplotlib: add v3.10.1 (#49233) 2025-03-01 16:22:49 +01:00
dependabot[bot]
b42f0d793d
build(deps): bump isort in /.github/workflows/requirements/style (#49212) 
Bumps [isort](https://github.com/PyCQA/isort) from 6.0.0 to 6.0.1.
- [Release notes](https://github.com/PyCQA/isort/releases)
- [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md)
- [Commits](https://github.com/PyCQA/isort/compare/6.0.0...6.0.1)

---
updated-dependencies:
- dependency-name: isort
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2025-03-01 08:18:06 -07:00
dependabot[bot]
ccca0d3354
build(deps): bump isort from 6.0.0 to 6.0.1 in /lib/spack/docs (#49213) 
Bumps [isort](https://github.com/PyCQA/isort) from 6.0.0 to 6.0.1.
- [Release notes](https://github.com/PyCQA/isort/releases)
- [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md)
- [Commits](https://github.com/PyCQA/isort/compare/6.0.0...6.0.1)

---
updated-dependencies:
- dependency-name: isort
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2025-03-01 08:17:39 -07:00
HELICS-bot
9699bbc7b9
helics: Add version 3.6.1 (#49231) 
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
 2025-03-01 08:16:21 -07:00
Raffaele Solcà
c7e251de9f
Add dla-future v0.8.0 (#49235) 2025-03-01 08:14:52 -07:00
Robert Maaskant
d788b15529
libmd: add version 1.1.0 (#49239) 
Release notes can be read at https://archive.hadrons.org/software/libmd/libmd-1.1.0.announce
 2025-03-01 08:11:12 -07:00
Harmen Stoppels
8e7489bc17
Revert "Honor cmake_prefix_paths property if available (#42569)" (#49237) 
This reverts commit fe171a560b.
 2025-02-28 23:33:02 +01:00
John W. Parent
d234df62d7
Solver: Cache Concretization Results (#48198) 
Concretizer caching for reusing solver results
 2025-02-28 12:42:00 -06:00
Mikhail Titov
4a5922a0ec
py-radical-*: new version 1.90 (#48586) 
* rct: update packages (RE, RG, RP, RS, RU) with new version 1.90

* radical: added `url_for_version` for older versions

* radical: set latest versions for `radical.pilot` and `radical.utils`

* radical: fixed `url_for_version` setup

* radical: set the latest version for `radical.entk`

* radical: fixed style for `url_for_version`

* Apply suggestions from code review (python version dependency)

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
 2025-02-28 07:38:45 -07:00