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1124 Commits

Author SHA1 Message Date
alalazo
0b7c673205 modules : changed syntax for environment modifications 2016-05-10 15:48:37 +02:00
alalazo
f8f71b1c2c modules : prefix_inspections moved to modules.yaml 2016-05-10 13:37:03 +02:00
alalazo
9eee71edf7 Merge branch 'develop' of https://github.com/LLNL/spack into features/custom_modulefile_from_config 2016-05-10 11:13:19 +02:00
Todd Gamblin
42edb6840e Merge pull request #905 from adamjstewart/features/rpath_flag 
Allow compilers to specify their own rpath linking flags
 2016-05-10 01:56:49 -07:00
Todd Gamblin
a2528a86b4 Merge pull request #692 from mathstuf/quoted-command-lines 
executable: quote arguments
 2016-05-10 01:42:26 -07:00
Todd Gamblin
8ce45d2161 Merge pull request #775 from epfl-scitas/fixes/config_update 
fix: proper update of config file
 2016-05-10 01:35:56 -07:00
Todd Gamblin
57e495943f Merge pull request #757 from glennpj/extend_r 
Make R extendable
 2016-05-10 01:30:13 -07:00
Todd Gamblin
69f6baf28e Merge pull request #842 from hegner/compiler_lookup_order 
Bugfix - preserve lookup order in PATH when invoking 'spack compiler add'
 2016-05-10 01:11:18 -07:00
Todd Gamblin
cbfba84aa2 Merge pull request #849 from brettviren/bugfix/share-pkgconfig 
Add  to sub dirs checked for pkg-config files.
 2016-05-10 00:59:01 -07:00
Adam J. Stewart
6665a996e6 Add documentation for rpath_flag handling 2016-05-09 17:04:14 -05:00
Adam J. Stewart
58733eb26a Comment change 2016-05-09 16:59:39 -05:00
Adam J. Stewart
b211829fb1 Testing typo 2016-05-09 16:59:39 -05:00
Adam J. Stewart
4473311bdb Allow compilers to specify their own rpath linking flags 2016-05-09 16:59:39 -05:00
Denis Davydov
7a2d65967c wrap tty.die to 80 chars 2016-05-09 22:04:34 +02:00
Denis Davydov
c37ea9aff5 document usage of compiler flags properties 2016-05-05 11:56:58 +02:00
Denis Davydov
f84f04591b substitute cxx14_flag by a property with the same name to be overridden in derived classes 2016-05-05 10:48:31 +02:00
Denis Davydov
c6fb6bde40 remove cxx11_flag from Compiler as it is now substituted by a property with the same name 2016-05-05 10:47:02 +02:00
Denis Davydov
ddcb97f953 add a temporary Nag.cxx11_flag property 2016-05-05 10:44:41 +02:00
Denis Davydov
473a5542be compiler: make default openmp_flag() and cxx11_flag() die when these properties are not implemented in a derived class 2016-05-05 10:44:41 +02:00
Denis Davydov
30b65d3114 fix comment in Compiler class 2016-05-05 10:44:41 +02:00
Denis Davydov
e28ca3922f compiler: cleanup Nag.cxx11_flag and Pgi.cxx11_flag 2016-05-05 10:44:41 +02:00
Denis Davydov
d5a760776a compiler: add default implementation of openmp_flag() and css11_flag() 2016-05-05 10:44:41 +02:00
Denis Davydov
6a418cfb8d compiler: simplify Clang.is_apple 2016-05-05 10:44:41 +02:00
Denis Davydov
f2f1c49c90 compilers: one more missing import statement 2016-05-05 10:44:41 +02:00
Denis Davydov
07fd0ccc9a compiler: add Clang.is_apple property which checks if Clang is from Apple or not using version 2016-05-05 10:44:41 +02:00
Denis Davydov
592045cd54 compilers: make Intel::openmp_flag() return -openmp and -qopenmp based on the compiler version 2016-05-05 10:44:41 +02:00
Denis Davydov
3cd3052c56 compilers: minor fixes to Clang::cxx11_flag() and Clang::openmp_flag() 2016-05-05 10:44:41 +02:00
Denis Davydov
c078deaab1 compilers: add missing import statements 2016-05-05 10:44:41 +02:00
Denis Davydov
9776dc0433 compilers: add openmp_flag() method 2016-05-05 10:44:41 +02:00
Denis Davydov
2cdfe14e5a compilers: make sure cxx11_flag() is defined for all compilers 2016-05-05 10:44:41 +02:00
Todd Gamblin
13e52962ee Merge pull request #802 from gartung/std-cpp14 
Handle c++11 and c++14 correctly
 2016-05-05 01:41:55 -07:00
Denis Davydov
c3317819cb mpi: add self.spec.[mpicc|mpicxx|mpifc|mpif77] to avoid hardcoding MPI wrappers names 2016-05-04 10:37:52 +02:00
Todd Gamblin
c35994d5bf Merge pull request #850 from mathstuf/partial-downloads 
fetch_strategy: download to temporary files
 2016-04-28 10:22:43 -07:00
Todd Gamblin
8773a0b747 Merge pull request #847 from epfl-scitas/features/test_install_with_time 
test-install command : added elapsed time + xml is prettyprinted
 2016-04-27 17:32:21 -07:00
Ben Boeckel
e53571d2f0 fetch_strategy: download to temporary files 
This supports graceful recovery if spack is killed via a signal (e.g.,
SIGINT) while downloading a file.

Fixes #287.
 2016-04-27 14:49:27 -04:00
Brett Viren
b5ebd12fe2 Add to sub dirs checked for pkg-config files. 
This lets me build against the pure-include package Eigen.
 2016-04-27 13:45:05 -04:00
Massimiliano Culpo
b1ba869b37 test-install : fixed error in logic exposed by tests 2016-04-27 19:28:13 +02:00
Massimiliano Culpo
4846ab70d8 test-install : python 2.6 compatibility 2016-04-27 18:21:36 +02:00
Massimiliano Culpo
ec5bb88820 test-install : unit tests (hopefully) fixed for real 2016-04-27 18:06:41 +02:00
alalazo
42fab1591d test-install : fixed unit tests 2016-04-27 17:19:03 +02:00
alalazo
12dbd65f4c test-install : first draft that works 2016-04-27 13:56:32 +02:00
Benedikt Hegner
b7c064142e preserve lookup order in PATH when invoking 'spack compiler add' 2016-04-27 01:23:53 +02:00
Ben Boeckel
603467785b Compiler find docs (#831) 
* docs: mention `spack compiler find`

* docs: fix some weird wording.
 2016-04-26 10:00:54 -07:00
alalazo
99b52e6e71 test-install : wip to add other information 2016-04-26 16:41:33 +02:00
Ben Boeckel
ff9145f8a5 executable: quote arguments 
This allows command line arguments with spaces to be shown. The quoting
madness is because a single quote cannot appear within a single quoted
argument on the command line. To do so, you have to stop the single
quote argument, double quote the single quote, then open the single
quote again:

    $ echo 'before'"'"'after'
    before'after

Fixes #174
 2016-04-25 09:44:17 -04:00
Ben Boeckel
ed16bd133a compiler: add "find" subcommand (#818) 
And make "add" an alias to it.

Fixes #713.
 2016-04-23 13:34:51 -07:00
alalazo
67a01ef2ee tcl : extended conflict to be an array of strings 2016-04-22 10:50:24 +02:00
Todd Gamblin
fa02f94ca4 Regression test for not adding RPATHs with ld -r (#809, #821) 
- ld -r is only broken with rpaths on OSX; this tests that
  specific case.

- test should still work cross-platform.
 2016-04-21 23:12:33 -07:00
Denis Davydov
a0989ad672 minor cleanup of environment-modules documentation (#814) 
* minor cleanup of environment-modules documentation

* environment modules: update usage instructions
 2016-04-21 19:26:19 -07:00
Patrick Gartung
d5d1e89cbd remove use of unknown environment variable in lib/spack/env/cc (#821) 2016-04-21 19:15:54 -07:00
Adam Lyon
e92da6a6ba Handle c++11 and c++14 correctly 2016-04-19 16:52:08 -05:00
alalazo
5deaaa278c modules : added a few unit tests 2016-04-19 14:25:12 +02:00
alalazo
bce276d573 fix : missing autoload, failing validation 2016-04-18 17:51:53 +02:00
alalazo
50b148ca22 modules : tcl modules handle 'conflict' directive. This should completely cover the functionality in #498 2016-04-18 13:22:50 +02:00
alalazo
18a241fe21 modules : added hook for module specific extensions 2016-04-18 13:22:31 +02:00
alalazo
c69acfa5c8 naming work correctly 2016-04-18 13:22:04 +02:00
alalazo
00f44d558a modules : started working on naming schemes and conflict 2016-04-18 13:21:41 +02:00
alalazo
1b4c4be151 modules : category is a single word (as I am not sure how dotkit will react to spaces) 2016-04-13 12:44:51 +02:00
alalazo
c422ce7c1d modules : added doc strings, fixed minor style issues, filtered from dependencies blacklisted modules 2016-04-13 11:26:22 +02:00
alalazo
fcd58a95dd Merge branch 'develop' of https://github.com/LLNL/spack into features/custom_modulefile_from_config 2016-04-13 10:49:00 +02:00
alalazo
27280ea8be fix : added regression tests 2016-04-12 17:28:23 +02:00
alalazo
80678b2188 fix : proper update of config file (before it was discarding architectures that were not the current one) fixes #774 2016-04-12 16:54:51 +02:00
alalazo
41f365112c modules : added provenance comment in tcl header 2016-04-12 09:13:50 +02:00
alalazo
3959ca6270 modules : added possibility to blacklist or whitelist module files 2016-04-11 18:10:06 +02:00
alalazo
0e2b1359e3 modules : fixed bug preventing the creation of modulefiles autoloading only direct dependencies 2016-04-11 11:01:47 +02:00
Massimiliano Culpo
a5a5dbc408 tcl module file : added new-lines in autoload (per @glennpj bug report) 2016-04-10 13:21:41 +02:00
Matthew LeGendre
1af88be371 Spack was no longer using $TMPDIR for its stage area at LLNL. Spack's directory search was unnecessarily putting candidates that contained your username at the end of its search list. 2016-04-08 11:06:14 -07:00
alalazo
1714f410f0 Merge branch 'develop' of https://github.com/LLNL/spack into features/custom_modulefile_from_config 2016-04-07 10:48:16 +02:00
alalazo
7dc1524c08 modules : added stub for dotkit (to be verified) 2016-04-07 10:48:05 +02:00
Glenn Johnson
b19d6ab9c5 Check for non-numeric bits in the stem. 2016-04-06 19:08:01 -05:00
Glenn Johnson
fbabfc593d Make R extensable and add a couple of packages for verification. 
Added R as a build system so that the create template will have the
correct configure line.
Added a regex for version parsing as the R URLs are a little odd.
 2016-04-06 16:44:22 -05:00
Massimiliano Culpo
4001663982 leftover from cherry-pick 2016-04-06 22:19:07 +02:00
alalazo
73b6214a13 module files : proper cleanup on uninstall fixes #216 
Conflicts:
	lib/spack/spack/test/database.py
 2016-04-06 22:10:04 +02:00
alalazo
21b7734d92 modules : removed debug leftover 2016-04-06 17:08:31 +02:00
alalazo
7904f75782 modules : all the other strings are lower case 2016-04-06 17:05:47 +02:00
alalazo
e4cfe74887 modules : customization based on specs 2016-04-06 16:42:56 +02:00
alalazo
e993c17f89 modules : added environment modifications from configuration file 2016-04-06 14:02:27 +02:00
alalazo
d636b4fdde modules : more sensible name to blacklist environment variables 
modules : added skeleton to permit modifications based on specs
 2016-04-06 13:42:47 +02:00
Todd Gamblin
e104592e1f Merge pull request #738 from eschnett/eschnett/cleanup-cc 
Clean up cc script
 2016-04-05 10:50:45 -07:00
alalazo
670cb423f9 modules : iterating on all the dependencies doesn't reuire try/except KeyError 2016-04-05 18:44:40 +02:00
alalazo
5da37c573f modules : don't pass stream around 2016-04-05 18:41:38 +02:00
alalazo
2968b60ee0 module file : added autoload and prereq 2016-04-05 18:03:09 +02:00
alalazo
ca7d701007 module file : all the dependencies can affect the run_time environment, not only extendees 2016-04-05 16:10:04 +02:00
alalazo
c352249e30 EnvModules : narrowing the type of exceptions being "handled" 2016-04-05 14:55:05 +02:00
Erik Schnetter
4ce03b75bc Correct typo 2016-04-05 07:42:23 -04:00
alalazo
d546d828d3 module file : added filtering based on environment variable name 2016-04-05 13:20:28 +02:00
Todd Gamblin
0296f96c7b Resolves #739. Don't call setup_dependent_* for package itself. 2016-04-04 13:56:15 -07:00
Erik Schnetter
0ff059e388 Clean up comments and output messages 2016-04-04 16:00:09 -04:00
Erik Schnetter
83d6e04d39 Convert = to == in tests; untabify 2016-04-04 15:38:21 -04:00
Erik Schnetter
7bc28cc334 Clean up cc script 2016-04-04 14:33:48 -04:00
Todd Gamblin
5084130e71 Merge pull request #715 from citibeth/efischer/160401-EnvironmentModules 
Added Environment Modules
 2016-04-04 10:41:54 -07:00
Todd Gamblin
c7b11360e9 Merge pull request #732 from citibeth/efischer/160403-ConditionalExtendsBugfix 
[Needs Review] Fix conditional extends (BUG #683)
 2016-04-04 10:21:26 -07:00
Todd Gamblin
a6c1cfe037 Merge pull request #670 from epfl-scitas/uninstall_improved 
enhancement : recursive uninstallation of dependent packages
 2016-04-04 10:04:14 -07:00
Todd Gamblin
bb968fc5a2 Fix #620, Resolve #664. Fix issues with build environment. 
- Also added better regression tests for build environment.
 2016-04-04 02:52:38 -07:00
alalazo
f40b0f52e0 uninstall : updated documentation and error messages 2016-04-04 10:59:01 +02:00
alalazo
401dcb3635 uninstall : renamed --recursive to --dependents 2016-04-04 10:28:47 +02:00
Elizabeth F
2f4d8a634d Fix conditional extends (BUG #683) 2016-04-03 21:41:46 -04:00
citibeth
459aab628d Added documentation for installing Environment Modules with Spack. 2016-04-01 16:00:58 -04:00
Todd Gamblin
220c72d67f Merge branch 'features/blas-lapack-hardening' into develop 2016-03-31 11:37:09 -07:00
Todd Gamblin
a670408617 Quick fix for pkg diff. 2016-03-31 11:34:27 -07:00