Pranav Sivaraman
5303ec9aa5
neocmakelsp: new package ( #46623 )
...
* neocmake: add new package
* neocmake: add description, homepage, and license
* neocmakelsp: remove boilerplate
2024-09-30 14:39:25 -07:00
Harmen Stoppels
02499c72c9
avoid rpath'ing default search paths ( #44686 )
...
On sysroot systems like gentoo prefix, as well as nix/guix, our "is
system path" logic is broken cause it's static.
Talking about "the system paths" is not helpful, we have to talk
about default search paths of the dynamic linker instead.
If glibc is recent enough, we can query the dynamic loader's default
search paths, which is a much more robust way to avoid registering
rpaths to system dirs, which can shadow Spack dirs.
This PR adds an **additional** filter on rpaths the compiler wrapper
adds, dropping rpaths that are default search paths. The PR **does
not** remove any of the original `is_system_path` code yet.
This fixes issues where build systems run just-built executables
linked against their *not-yet-installed libraries*, typically:
```
LD_LIBRARY_PATH=. ./exe
```
which happens in `perl`, `python`, and other non-cmake packages.
If a default path is rpath'ed, it takes precedence over
`LD_LIBRARY_PATH`, and a system library gets loaded instead
of the just-built library in the stage dir, breaking the build. If
default paths are not rpath'ed, then LD_LIBRARY_PATH takes
precedence, as is desired.
This PR additionally fixes an inconsistency in rpaths between
cmake and non-cmake packages. The cmake build system
computed rpaths by itself, but used a different order than
computed for the compiler wrapper. In fact it's not necessary
to compute rpaths at all, since we let cmake do that thanks to
`CMAKE_INSTALL_RPATH_USE_LINK_PATH`. This covers rpaths
for all dependencies. The only install rpaths we need to set are
`<install prefix>/{lib,lib64}`, which cmake unfortunately omits,
although it could also know these. Also, cmake does *not*
delete rpaths added by the toolchain (i.e. Spack's compiler
wrapper), so I don't think it should be controversial to simplify
things.
2024-09-30 20:32:50 +02:00
Wouter Deconinck
f1275536a2
libexif: add v0.6.24 (fix CVEs) ( #46634 )
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* libexif: add v0.6.24 (fix CVEs)
* libexif: operator Version -> spec.satisfies
Co-authored-by: Alec Scott <hi@alecbcs.com >
---------
Co-authored-by: Alec Scott <hi@alecbcs.com >
2024-09-30 11:14:38 -07:00
Wouter Deconinck
a88239affc
hazelcast: add v5.5.0 (fix CVE) ( #46666 )
2024-09-30 11:10:50 -07:00
Wouter Deconinck
260ea91b83
qpdf: add v11.9.1 (fix CVE) ( #46645 )
2024-09-30 10:01:15 -07:00
John Jolly
dea075a8b0
tmux: Fix MacOS header guard collison build bug
2024-09-30 18:55:03 +02:00
H. Joe Lee
5f333c3632
hermes-shm: new package ( #46601 )
2024-09-30 18:46:01 +02:00
Wouter Deconinck
59b5cb0962
rabbitmq-c: add v0.14.0 (fix CVE) ( #46648 )
2024-09-30 09:38:24 -07:00
Benjamin Rodenberg
16410cda18
py-pyprecice: add v2.5.0.3 -> v3.1.1 ( #45105 )
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* Add missing 2.5 releases and 3.x releases.
* Update var/spack/repos/builtin/packages/py-pyprecice/package.py
* Update package.py
Add license (again)
2024-09-30 09:18:30 -07:00
Wouter Deconinck
100c8b7630
routinator: add v0.14.0 (fix CVE) ( #46649 )
2024-09-30 10:17:04 -04:00
Thomas-Ulrich
47591f73da
impalajit, hipsycl, tandem: various updates ( #45013 )
2024-09-30 11:17:46 +02:00
AMD Toolchain Support
d3b4f0bebc
nwchem: add v7.2.3 ( #46479 )
...
Co-authored-by: viveshar <vivek.sharma2@amd.com >
Co-authored-by: Vivek Sharma <129405591+VivekAMD@users.noreply.github.com >
2024-09-30 11:15:49 +02:00
Wouter Deconinck
5c52ded1be
pacparser: add v1.4.5 ( #46639 )
2024-09-30 03:04:28 -06:00
Bernhard Kaindl
ff7e1b5918
shadow: add 4.16, fix build when libbsd installed on hosts ( #46621 )
2024-09-30 10:53:32 +02:00
Wouter Deconinck
6ea8079919
cups: fix url; add v2.4.10 ( #46624 )
...
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com >
2024-09-30 10:47:53 +02:00
Wouter Deconinck
d48cf4ea3e
flume: add v1.11.0 ( #46630 )
2024-09-30 10:44:16 +02:00
Wouter Deconinck
41044b6f84
flink: add v1.20.0 ( #46631 )
2024-09-30 10:43:04 +02:00
Wouter Deconinck
338c331115
libpcap: add v1.10.5 ( #46635 )
2024-09-30 10:42:15 +02:00
Wouter Deconinck
563f76fbe5
libressl: add v3.7.3, v3.8.4, v3.9.2 ( #46636 )
2024-09-30 10:41:22 +02:00
Wouter Deconinck
6a2fb38673
net-snmp: add v5.9.4 ( #46638 )
2024-09-30 10:40:34 +02:00
Wouter Deconinck
429c5149ce
perl-dbi: add v1.645 ( #46640 )
2024-09-30 10:39:32 +02:00
Wouter Deconinck
043fea4ef9
postgresql: add v12.20, v13.16, v14.13, v15.8, v16.4 (fix CVEs) ( #46641 )
2024-09-30 10:34:21 +02:00
Wouter Deconinck
4aa1f92c9c
gdk-pixbuf: add v2.42.12 ( #46633 )
2024-09-30 10:32:56 +02:00
stepanvanecek
92d3e0ca6f
sys-sage add v0.5.0 ( #46659 )
...
Co-authored-by: Stepan Vanecek <stepan.vanecek@tum.de >
2024-09-30 10:28:44 +02:00
Wouter Deconinck
a28b9ec8f3
py-mechanize: add v0.4.10 ( #46642 )
2024-09-30 10:25:38 +02:00
Wouter Deconinck
d7452f68a0
py-pycryptodome: add v3.20.0 ( #46643 )
2024-09-30 10:24:59 +02:00
Wouter Deconinck
4c333fb535
py-werkzeug: add v3.0.4 ( #46644 )
2024-09-30 10:23:51 +02:00
Wouter Deconinck
f32bdea867
qt-*: add v6.7.3 ( #46646 )
2024-09-30 10:22:53 +02:00
Wouter Deconinck
05ad0618cc
unixodbc: add v2.3.12 ( #46650 )
2024-09-30 10:18:22 +02:00
Wouter Deconinck
e0987e0350
umoci: fix url; add v0.4.7 ( #46651 )
2024-09-30 10:17:13 +02:00
Christoph Junghans
519ed7f611
votca: add v2024.2 ( #46653 )
2024-09-30 09:35:38 +02:00
Wouter Deconinck
ecbc21a7ce
rpm: add v4.18.2 ( #46654 )
2024-09-30 09:34:51 +02:00
Satish Balay
56c61763d7
slepc, py-slepc4py, petsc, py-petsc4py add v3.22.0 ( #46647 )
...
Co-authored-by: Jose E. Roman <jroman@dsic.upv.es >
2024-09-30 09:33:58 +02:00
Wouter Deconinck
8168b17ddf
libvips: add v8.15.3 ( #46655 )
2024-09-30 09:32:20 +02:00
SXS Bot
d2a5b07d7f
spectre: add v2024.09.29 ( #46657 )
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Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com >
2024-09-30 09:27:13 +02:00
Wouter Deconinck
b570ca3cf3
hive: add v3.1.3 (fix CVEs) ( #46632 )
2024-09-28 22:59:54 -06:00
Pranav Sivaraman
343586d832
fd: add minimum rustc version requirement ( #46622 )
2024-09-28 22:38:48 -06:00
etiennemlb
a8d02bd3b0
cp2k: fix libs type issue ( #46079 )
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* Fix CP2K list/LibraryList issue
* [@spackbot] updating style on behalf of etiennemlb
2024-09-28 10:02:51 -07:00
Maciej Wójcik
e45019f246
snakemake: add new version and update plugins ( #43437 )
2024-09-28 17:12:37 +02:00
MatthewLieber
f31a99f188
mvapich: Add pmix variant ( #45531 )
2024-09-28 15:17:10 +02:00
Adam J. Stewart
6c4abef75c
py-protobuf: drop +cpp, always require protobuf ( #46501 )
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* py-protobuf: drop +cpp, always require protobuf
* Fix remaining reference to +cpp
2024-09-28 15:13:42 +02:00
Pranav Sivaraman
4f6789bb38
highway: remove HWY_CMAKE_ARM7 (not supported) ( #45815 )
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Spack currently does not detect armv7 architectures so remove it.
2024-09-28 14:43:01 +02:00
Pasquale Claudio Africa
aff3fd8efd
trilonos: Fix missing #include <cstdint> for gcc-13+ ( #46165 )
2024-09-28 14:33:43 +02:00
Marie Houillon
3bacced861
opencarp, meshtool, py-carputils: New openCARP version v16.0 ( #45820 )
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Co-authored-by: openCARP consortium <info@opencarp.org >
2024-09-28 14:20:49 +02:00
dependabot[bot]
849b82d242
build(deps): bump docker/build-push-action from 6.7.0 to 6.8.0 ( #46618 )
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Bumps [docker/build-push-action](https://github.com/docker/build-push-action ) from 6.7.0 to 6.8.0.
- [Release notes](https://github.com/docker/build-push-action/releases )
- [Commits](5cd11c3a4c...32945a3392support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-09-28 05:57:35 -06:00
wspear
114ac5908a
gpgme: fix dep on libassuan up to @2.5.7 ( #45703 )
...
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com >
Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev >
2024-09-28 05:22:51 -06:00
Cristian Di Pietrantonio
19712d3461
Singularity: set share loop devices to yes. ( #45846 )
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https://docs.sylabs.io/guides/main/admin-guide/configfiles.html#loop-devices
shared loop devices: This allows containers running the same image
to share a single loop device. This minimizes loop device usage and
helps optimize kernel cache usage.
Enabling this feature can be particularly useful for large MPI jobs.
2024-09-28 13:14:19 +02:00
kwryankrattiger
e08a72a333
dav-sdk: Add new DaV SDK Package ( #45465 )
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This package is a post-ECP port of the Data and Vis SDK. The new
DAV SDK drops the ECP prefix and some previously included packages.
2024-09-28 13:05:31 +02:00
Cristian Di Pietrantonio
1b6345828d
AMBER: Add conflict clause to avoid using X11 on Cray ( #45844 )
2024-09-28 12:40:19 +02:00
Victor Lopez Herrero
04f4493c5b
dlb: add v3.4.1 ( #46032 )
2024-09-28 12:17:39 +02:00
