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32 Commits

Author SHA1 Message Date
Denis Davydov
fab9af7081 slepc/petsc: fix python dependency (#2560) 2016-12-13 01:32:42 -08:00
Barry Smith
3a1e191b72 Implementation of spack file for Pflotran (#2444) 
Supports installing both a "known version" of PETSc/PFlotran that works and
the develop/master branches of both packages

Funded-by: IDEAS
Project: IDEAS/xSDK
Time: 4 hour
 2016-12-10 16:22:36 -08:00
Denis Davydov
4d0ea423fb petsc: explicitly disable X11 (#2533) 
otherwise petsc may pickup libX11 on login nodes during config/build,
but libX11 may not be available on computation nodes.
 2016-12-09 08:43:38 -08:00
Barry Smith
4d56d4f1f9 add support for installing the development (master) version of PETSc (#2431) 
Funded-by:  IDEAS
Project:  IDEAS/xSDK
Time:   .3 hours
x
 2016-11-29 09:28:09 -06:00
Denis Davydov
0e59ade030 petsc: minor fixes... (#2036) 
* petsc: require boost for :3.5 only

* petsc: turn off download for c2html and hwloc
 2016-10-18 08:09:18 -07:00
Denis Davydov
0d89e5e32b Package/petsc slepc new versions (#2019) 
* petsc: add 3.7.4

* slepc: add 3.7.3
 2016-10-14 08:25:22 -07:00
Erik Schnetter
88af9f783d Make PETSc build on Darwin (#1835) 
Don't set cpp when building on Darwin.
 2016-09-26 10:38:02 -07:00
Denis Davydov
1e10309ff7 some fixes to blas/lapack usage in packages (#1852) 
* atlas: fix unit test

* openblas: remove symlinks; use lapack_libs.ld_flags in the test

* mkl: fix openmp variant of blas/lapack libs

* intel-parallel-studio: fix openmp variant of blas/lapack libs

* netlib-scalapack: fix blas/lapack for multilib case (e.g. mkl)

* arpack-ng: fix blas/lapack for multilib case (e.g. mkl)

* petsc: explicitly specify blas/lapack

* minor

* cantera: fix blas/lapack usage

* ipopt: fix blas/lapack usage

* netlib-lapack: fix external blas usage

* mfem: fix lapack/blas usage

* superlu-mt: fix blas usage

* flake8 fixes
 2016-09-26 10:37:23 -07:00
Erik Schnetter
00bac8f294 PETSc: Explicitly point to cpp when configuring (#1807) 
I encountered an HPC system where PETSc's configure stage does not find a valid `cpp` (C preprocessor). Explicitly pointing to Spack's `cpp` wrapper resolves the problem.
 2016-09-20 10:05:57 -07:00
Adam J. Stewart
1be6267149 Undo changes to trailing triple quotes in docstring 2016-08-30 16:28:55 -05:00
Adam J. Stewart
eb56744f4d Fix package docstrings, #1612 2016-08-30 15:29:50 -05:00
Todd Gamblin
84e331c586 Remove unneeded noqa comments. 2016-08-10 16:33:39 -07:00
Todd Gamblin
240f1fd223 Spack packages now PEP8 compliant. 2016-08-10 16:33:39 -07:00
Denis Davydov
e482994a15 petsc: add -lm when building example 2016-07-09 08:12:34 +02:00
Denis Davydov
c096bb332a petsc: fix unit tests 2016-07-06 22:45:43 +02:00
Denis Davydov
6f4b0e9bda petsc: fix flake8 and ~mpi case in tests 2016-06-30 08:22:01 +02:00
Denis Davydov
37728afada petsc: run a test 2016-06-30 00:19:50 +02:00
Denis Davydov
6390acc660 flake8 fixes for petsc 2016-06-15 18:32:42 +02:00
Denis Davydov
9ceb8fea78 petsc: add 3.6.4 and 3.7.2; specify superlu-dist version dependency 2016-06-15 18:21:13 +02:00
Todd Gamblin
e7ced54369 Correct LLNL LGPL license template for clarity. 2016-05-11 21:22:25 -07:00
Geoffrey Oxberry
ddaba07d82 metis 4.0.3 
Add version 4.0.3 to metis package. Attempted to implement reasonable
versions of all variants declared for metis@5.1.0; some of these do
not have analogues in metis@4.0.3, and errors are raised accordingly.

Also updated dependencies of packages with depends_on('metis') to
depends_on('metis@5:') to ensure that these packages still build.
 2016-04-06 15:49:59 -07:00
Denis Davydov
b909da759d petsc: remove no longer needed -Qunused-arguments hack 2016-03-30 19:26:03 +02:00
Denis Davydov
09e77812b6 fix installation of superlu_dist headers and add it as a dependency to petsc; add a variant to hypre to disable internal superlu 2016-03-29 00:21:32 +02:00
Denis Davydov
5eefca43e7 petsc: extend variants by mumps, complex and debug 2016-03-28 14:35:01 +02:00
Denis Davydov
27f337aa11 petsc: set PETSC_DIR in dependent_env 2016-03-22 22:12:01 +01:00
Denis Davydov
7b283bfaff fix petsc on osx 2016-03-21 07:50:10 +01:00
Todd Gamblin
45ef496dd5 Add some descriptive language to a list comprehension. 2016-03-09 11:26:37 -08:00
Todd Gamblin
b43c277dc6 Merge @citibeth and @alalazo's petsc fixes from #515 and #517 2016-03-09 10:55:50 -08:00
alalazo
f01d1c4385 petsc : added variants and logic to build various flavors 2016-03-09 14:36:37 +01:00
Todd Gamblin
8d6342c53d Merge branch 'mplegendre-multi_pkgsrc_roots' into develop 
- This moves var/spack/packages to var/spack/repos/builtin/packages.

- Packages that did not exist in the source branch, or were changed in
  develop, were moved into var/spack/repos/builtin/packages as part of
  the integration.

Conflicts:
	lib/spack/spack/test/unit_install.py
	var/spack/repos/builtin/packages/clang/package.py
 2016-01-19 01:16:08 -08:00
Todd Gamblin
c65fd3a289 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots 
Conflicts:
	lib/spack/spack/cmd/create.py
	lib/spack/spack/cmd/extensions.py
	lib/spack/spack/cmd/fetch.py
	lib/spack/spack/cmd/uninstall.py
	lib/spack/spack/config.py
	lib/spack/spack/database.py
	lib/spack/spack/directory_layout.py
	lib/spack/spack/packages.py
	lib/spack/spack/spec.py
 2015-12-25 16:35:55 -08:00
Todd Gamblin
89d5127900 New, cleaner package repository structure. 
Package repositories now look like this:

    top-level-dir/
        repo.yaml
        packages/
            libelf/
                package.py
            mpich/
                package.py
            ...

This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
 2015-11-26 14:19:27 -08:00