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Author SHA1 Message Date
Adam J. Stewart
cb770eb8e3 py-scipy: add v1.15.0 (#48393) 2025-01-04 09:04:53 +01:00
Adam J. Stewart
0a03a92e78 Avoid trailing slashes in strings (#48359) 2025-01-03 23:00:18 +01:00
Satish Balay
7f9019c1ca kokkos and kokkos-kernels - add v4.5.01 (#48363) 
trilinos@develop: update kokkos dependency
 2025-01-03 15:56:23 -06:00
Wouter Deconinck
1b9d001f6a feat: add HEP cloud_pipeline stack (#40932) 
* dd4hep: depends_on root +root7 in some cases

* dd4hep: avoid self-referential whens -> conflicts

* feat: add HEP cloud_pipeline stack

* [hep] add hep jobs to .gitlab-ci.yml

* [hep] rm hep-generate image override

* [hep] fix root variants; add some more packages

* [hep] disable hep-build for now

* [hep] hepmc3 +interfaces

* [hep] hep-generate on gcc-11.4 runner image

* [hep] sherpa -blackhat

* [hep] align package requirements to e4s for more cache hits

* [hep] lcio -examples due to conflicts

* [hep] marks geant4-data as external

* [hep] enable build

* [hep] elfutils now always has bzip2 xz dependency

* [hep] avoid gaudi ^gdb@8.1 with explicit version gdb@14.1

* [hep] geant4 -vtk for now

* [hep] root ~oracle

* [hep] external geant4-data@11.2.0

* [hep] sherap ~python

* [hep] gaudi ^gdb +python to avoid failing gdb@8.1

* [hep] pythia8 ~madgraph5amc

* [hep] remove garfieldpp which fails to download

* [hep] sherpa ~recola because recola needs pic variant

* [hep] sherpa ~rivet since conflicts("cxxstd=11", when="~rivet")

* [hep] unify: when_possible

* [hep] thepeg ~rivet

* [hep] root ~shadow

* [hep] lcio ~jar

* [hep] root ~postgres

* [hep] herwig3 ~evtgen

* [hep] herwig3 has no evtgen variant

* [hep] no image override in hep-generate

* [hep] re-add ubuntu-22.04 image for newer gcc than 7

* [hep] remove herwig3

* [hep] remove package configs

* [hep] avoid non-existent variants in latest versions

* [hep] allow for sherpa@3:

* [hep] acts cxxstd=20

* [hep] gaudi ^gdb +python

* [hep] gaudi ^gdb +debuginfod

* [hep] add some packages to large and huge kubernetes groups

* [hep] root +rpath

* [hep] add qt-declarative to large 8core 8GB CI group

* [hep] add sherpa to 8 core, 3 GB CI medium group

* [hep] add root to 12 core, 19 GB huge CI group

* [hep] gaudi: touch pytest.ini

* [hep] ~ instead of -

Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>

---------

Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
 2025-01-03 12:22:53 -07:00
Arash Partow
a52d817fa0 exprtk: add new package (#48326) 2025-01-03 12:48:05 -06:00
David Huber
ec286e857f Disable py-numpy AVX512 instructions when compiled with Intel (#47941) 
* Disable numpy AVX512 when compiled with Intel classic

* Add py-numpy v1.26.5

* Add patch to handle AVX512 conversions

* Remove unneeded patch.

* Remove unnecessary tag

* Move blas_config_settings to config_settings

* Cleaned up blas settings
 2025-01-03 11:27:59 -07:00
Andrey Alekseenko
690a6045a9 gromacs: remove dependency on Fortran (#48386) 
* gromacs: remove dependency on Fortran

Fortran was removed from GROMACS core since 4.6. There are a few contrib
files around, but they are not built anyway.

Also fix a couple typos.

* [@spackbot] updating style on behalf of al42and

---------

Co-authored-by: al42and <al42and@users.noreply.github.com>
 2025-01-03 07:58:22 -07:00
Harmen Stoppels
0a070512e6 tests: remove file requirement (#48362) 2025-01-03 15:49:06 +01:00
Wouter Deconinck
cb37f973d9 xxhash: add v0.8.3 (#48382) 2025-01-03 09:36:04 -05:00
Wouter Deconinck
33740c8d24 fuse-overlayfs: add v1.14 (#48331) 2025-01-03 13:07:10 +01:00
Wouter Deconinck
e374f8fb66 build_environment: only traverse unique edges (#48301) 
Wrap EnvironmentVisitor in CoverEdgesVisitor so only unique edges are enqueued.

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2025-01-03 12:17:26 +01:00
Krishna Chilleri
0394def68b py-uvicorn: add v0.27.1 (#48287) 
* py-uvicorn: add version 0.27.1

* add required py-typing-extensions dependency
 2025-01-02 22:13:19 -07:00
Seth R. Johnson
0782097775 geant4: fix bad patch for 10.x (#48332) 2025-01-02 15:27:40 -07:00
eugeneswalker
460bc82632 e4s ci: cleanup; see if failures have been fixed (#48137) 
* e4s ci: cleanup; see if failures have been fixed

* comment out dealii+cuda cuda_arch=90 due to cuda@12 conflict

* paraview unpin @5.11

* disable paraview cuda90

* ecp-dav ~paraview cuda90

* disable lbann gfx90a

* disable upcxx +cuda

* comment out nek5000 and lammps +cuda

* comment out failed specs

* comment out slepc+rocm

* comment out failures

* comment out failures

* comment out failing paraview buids;

* comment out petsc+rocm

* sort specs
 2025-01-02 13:27:40 -08:00
Massimiliano Culpo
880eb36a1f charliecloud: disable libsquashfuse when ~squashfuse (#48317) 2025-01-02 21:45:26 +01:00
Massimiliano Culpo
1f3b4e116f Add a C dependency to hipblaslt, and rocthrust (#48320) 2025-01-02 21:44:40 +01:00
Vicente Bolea
9b8835ba79 paraview: add v5.13.2 (#48324) 2025-01-02 10:55:26 -06:00
Kacper Kornet
fb1d4f8907 zoltan: Fix buliding with gcc@14 and ifx. (#48358) 
* zoltan: Ignore errors about incompatible pointer type with gcc@14

In gcc 14 -Werror=incompatible-pointer-types is now the default.
Silence it until it gets fixed in zoltan upstream.

* zoltan: Fix linking error when built with ifx
 2025-01-02 11:54:06 -05:00
Todd Gamblin
f635337af8 Remove years from license headers (#48352) 2025-01-02 15:40:28 +01:00
Wouter Deconinck
8f145f5e8e node-js: always depend on some python, regardless of lower/upper limits (#48350) 2025-01-02 03:00:09 -08:00
Alec Scott
022ae8503a oxide-rs: new-package 2025-01-02 01:17:37 -08:00
Alberto Invernizzi
3c64821c64 node-js: less strict python requirement for newer versions of node-js (#47942) 
* less strict python requirement for newer versions of node-js

* fix style

* add back constraints for deprecated versions

* Update var/spack/repos/builtin/packages/node-js/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* Update var/spack/repos/builtin/packages/node-js/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* remove "v" from versions in some constraints

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
 2025-01-01 16:15:17 -06:00
Alec Scott
866785bd74 py-jedi: fix python dependency constraints (#48322) 2024-12-31 20:56:53 -06:00
Buldram
60d321012e nim: add 2.0.14 (#48284) 
https://nim-lang.org/blog/2024/12/24/nim-2014-released.html
 2024-12-31 11:24:24 -05:00
Matt Thompson
8ee5cf4b31 mepo: add v2.2.0 (#48283) 2024-12-31 11:22:53 -05:00
Krishna Chilleri
d2a2ae3699 py-tomlkit: add version 0.11.8 (#48286) 2024-12-31 11:21:35 -05:00
Adam J. Stewart
547e324ee5 py-jsonargparse: add v4.35.0 (#48314) 2024-12-31 11:06:24 -05:00
Adam J. Stewart
693c74324a py-torchmetrics: add v1.6.1 (#48297) 2024-12-31 11:04:31 -05:00
Asa
dcf710a32d Add version 0.2.0 to py-olcf-velocity (#48311) 2024-12-31 10:47:51 -05:00
Massimiliano Culpo
38276d13c2 Add a C dependency to a few cargo packages (#48319) 
* fd: add a dependency on C

See https://gitlab.spack.io/spack/spack/-/jobs/14424172

* lsd: add a dependency on C

See https://gitlab.spack.io/spack/spack/-/jobs/14424171

* ripgrep: add a dependency on C

See https://gitlab.spack.io/spack/spack/-/jobs/14424170

* eza: add a dependency on C

See https://gitlab.spack.io/spack/spack/-/jobs/14424168

* hyperfine: add a dependency on C

See https://gitlab.spack.io/spack/spack/-/jobs/14424167
 2024-12-31 10:05:49 -05:00
Massimiliano Culpo
611b0f19b3 gnutls: add v3.8.4, fixed issue with non rpathed zstd (#48321) 
See https://gitlab.spack.io/spack/spack/-/jobs/14427936
 2024-12-31 10:04:19 -05:00
Tara Drwenski
337d9bebf8 Camp: Fix syntax error (#48269) 
* Fix camp syntax error by providing first archs element instead of tuple

* Provide all architectures as semicolon separated list
 2024-12-30 15:04:10 -08:00
Massimiliano Culpo
71512f5682 mpich: gather in a single place env modifications needed by mpich derivatives (#48276) 
* mpich: gather in a single place env modifications needed by mpich derivatives

MPICH, and its derivatives, share a lot of copy/paste code to setup the
environment during the different stages of the package life-cycle.

This commit gathers the common modifications in a single place (a mixin class),
living in the Mpich package, and makes derivatives import, and reuse, it.

* Fix docs for Python < 3.13
 2024-12-30 15:42:16 -07:00
Xuefeng Ding
a7373b8a31 gcc: fix typo in setup_run_environment condition (#48307) 2024-12-30 13:47:54 +01:00
Satish Balay
05de2b1ba1 petsc: fix compilers listed in pkgconfig/petsc.pc (#48201) 
* petsc: fix compilers listed in pkgconfig/petsc.pc

* Also fix reconfigure*.py
develop-2024-12-29 		2024-12-27 22:09:00 -06:00
Chris Marsh
f57d7fb952 gsl: update patch for 2.8 
The 2.7 patch does not apply on gsl@2.8.
This is a manual fix of the 2.6 patch to update it to clealy apply to gsl@2.8
 2024-12-28 00:49:03 +01:00
Karol Krizka
e76f8fda2d openloops: use cmodel small on aarch64 instead of large (#48299) 2024-12-27 09:07:54 -07:00
Juan Miguel Carceller
66a00fe103 freeglut: add v3.6.0 (#48292) 
* freeglut: add v3.6.0

* Change the version range for the patch

---------

Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
 2024-12-26 09:07:50 -07:00
dependabot[bot]
15124d7c73 build(deps): bump urllib3 from 2.2.3 to 2.3.0 in /lib/spack/docs (#48278) 
Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.2.3 to 2.3.0.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/2.2.3...2.3.0)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-12-26 09:03:38 -07:00
Karol Krizka
a14f10e882 openloops: Fix configuration of cmodel setting for gfortran (#48288) 
* openloops: Add cmodel to user config file to override setting added in 2.1.2.

* openloops: Change cmodel from small to large following author recommendation.
 2024-12-26 08:44:08 -06:00
Joseph Wang
16d3de4540 opendatadetector: fix attribute for libs (#48290) 2024-12-26 08:35:04 -06:00
psakievich
78bd905fe0 Ensure command_line scope is always last (#48255) 2024-12-25 14:32:31 -07:00
Harmen Stoppels
e9cdcc4af0 build caches: collect files to relocate while tarballing w/o file (#48212) 
A few changes to tarball creation (for build caches):
- do not run file to distinguish binary from text
- file is slow, even when running it in a batched fashion -- it usually reads all bytes and has slow logic to categorize specific types
- we don't need a highly detailed file categorization; a crude categorization of elf, mach-o, text suffices.
detecting elf and mach-o is straightforward and cheap
- detecting utf-8 (and with that ascii) is highly accurate: false positive rate decays exponentially as file size increases. Further it's not only the most common encoding, but the most common file type in package prefixes.
iso-8859-1 is cheaply (but heuristically) detected too, and sufficiently accurate after binaries and utf-8 files are classified earlier
- remove file as a dependency of Spack in general, which makes Spack itself easier to install
- detect file type and need to relocate as part of creating the tarball, which is more cache friendly and thus faster
 2024-12-24 10:53:13 -07:00
Massimiliano Culpo
aca469b329 mpi: remove setting unused monkey patched variable (#48275) 
mpicxx_shared_libraries seems a relic of #1550, and is
not currently used by any builtin package.

Thus, cleanup the recipes, and avoid monkey-patching
spec objects.
 2024-12-24 14:29:53 +01:00
Wouter Deconinck
c65a0e03c4 doc: ensure getting_started has bootstrap list output in correct place (#48281) 2024-12-24 04:48:02 -07:00
Wouter Deconinck
b02340724d gaudi: Fix nonexistent 'libs' (#48274) 2024-12-23 12:57:42 -07:00
Philipp Edelmann
250de0cdf2 fix spack external find for Python >= 3.13 (#48170) 
Python >= 3.13 does not have the crypt variant anymore. Still no matter
if the test for crypt succeeds (which it can on Fedora providing its own
crypt module for Python 3.13) or fails, it will add +crypt or ~crypt,
which both fail because the variant only exists until Python 3.12.

Co-authored-by: Richard Berger <rberger@lanl.gov>
 2024-12-23 10:56:13 -08:00
Carson Woods
da97e9eaa7 py-fitter: add v1.5.2, v1.6.0 (#41035) 2024-12-23 18:29:14 +01:00
Massimiliano Culpo
a3322459fe bootstrap mirror: fix references from v0.4 to v0.6 (#48235) 2024-12-23 14:06:48 +01:00
Olivier Cessenat
88d5393570 silo: variant python needs python (#48257) 
* silo: variant python needs python

* Dependency to Python did not resolve the "Python.h" header not being found

Added the -I path to Python header to the compiler.
Having silo depend on python was not sufficient to get the path to python.
Maybe there is a smarter way to do that, but this one works.

* Update var/spack/repos/builtin/packages/silo/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* Update var/spack/repos/builtin/packages/silo/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* Update var/spack/repos/builtin/packages/silo/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
 2024-12-22 19:13:23 -06:00