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a550b8ce30033ccdfe2a52983aab03c1d485a528
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Author SHA1 Message Date
Jen Herting
a550b8ce30 New package: py-pynndescent (#32076) 
* [py-pynndescent] New package

* [py-pynndescent] Removed white space

* [py-pynndescent] fixed dependencies

* [py-pynndescent] flake8

* [py-pynndescent] Import update

Co-authored-by: James A Zilberman <jazrc@rit.edu>
 2022-08-11 17:41:54 -06:00
Chris White
8c23545a3a CachedCMakePackage: Port over logic from CMake build system for ldlibs and ldflags (#31750) 
* port over logic from cmake build system for ldlibs and ldflags

* follow new style standards

* escape quotes

* escape quotes

* nevermind going back
 2022-08-11 14:55:43 -07:00
Satish Balay
6ab6058ab4 petsc, py-petsc4py: add 3.17.4 (#32071) 2022-08-11 14:46:33 -06:00
Swann Perarnau
25da1052f7 aml: add v0.2, cuda,opencl,hip support (#30701) 
- [x] Add release v0.2 of the AML package, deprecate v0.1, and add support for
      OpenCL, HIP, and CUDA variants of the library. Also update repo and
      release URL, as the previous one is not accessible anymore.
- [x] aml: add oneapi-level-zero support
- [x] Change openmp flags to force compatibility when compiling with
      intel-oneapi compilers.
 2022-08-11 15:34:04 -05:00
snehring
29ee89b28b pasta: updating to latest version (#32077) 
* pasta: updating to latest version

* pasta: fixing missing 's' from maintainers
 2022-08-11 19:23:12 +00:00
Wouter Deconinck
02a5996d24 podio, edm4hep: new versions (#32063) 
* podio, edm4hep: new versions

* edm4hep: new version

* edm4hep: @0.6: depends_on podio@0.15:
 2022-08-11 10:50:01 -07:00
Brian Spilner
8cf5e829d9 release cdo-2.0.6 (#32069) 2022-08-11 17:36:38 +00:00
Olivier Cessenat
2d3db71729 pwgen: add new package (#32053) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-08-11 17:36:12 +02:00
Erik Schnetter
714a211e25 hwloc: add v2.8.0 (#32042) 2022-08-11 08:45:59 -06:00
Harmen Stoppels
ceda5fb46c Don't set LD_LIBRARY_PATH by default on Linux (#28354) 
`LD_LIBRARY_PATH` can break system executables (e.g., when an enviornment is loaded) and isn't necessary thanks to `RPATH`s.  Packages that require `LD_LIBRARY_PATH` can set this in `setup_run_environment`.

- [x] Prefix inspections no longer set `LD_LIBRARY_PATH` by default
- [x] Document changes and workarounds for people who want `LD_LIBRARY_PATH`
 2022-08-11 09:33:08 -05:00
Harmen Stoppels
e4d296dfc5 cmake: add v3.23.3 and v3.22.6 (#31926) 2022-08-11 14:51:28 +02:00
Robert Cohn
f84fa41cd1 Pin tbb version for salmon & dyninst (#32026) 2022-08-11 14:45:25 +02:00
Adam J. Stewart
975ebaaec7 py-matplotlib: add v3.5.3 (#32051) 2022-08-11 06:29:47 -06:00
Andrew W Elble
d60aa995a9 py-tensorflow-estimator: new versions (#32029) 
* py-tensorflow-estimator: new versions

* [@spackbot] updating style on behalf of aweits

Co-authored-by: aweits <aweits@users.noreply.github.com>
 2022-08-11 06:25:58 -06:00
Chris Green
46c8962e91 Add missing info to diagnostic for circular provides (#32027) 2022-08-11 14:20:17 +02:00
Olivier Cessenat
76d8376fea gxsview: gcc11 compilation rule for std::numeric_limits (#31970) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-08-11 14:18:01 +02:00
Tamara Dahlgren
f96b54b0a6 info: properly report default when for overridden variants (#32040) 2022-08-11 14:09:53 +02:00
Adam J. Stewart
5e57677140 py-scipy: 1.4.0:1.4.1 conflict on ppc64le (#32050) 2022-08-11 13:53:05 +02:00
Harmen Stoppels
6503652bc3 bubblewrap: add v0.6.2 (#32055) 2022-08-11 13:46:35 +02:00
David Schneider
2165d7205a precice: add v2.5.0 (#32052) 2022-08-11 13:44:50 +02:00
Brian Van Essen
0d5437ea4e Add support for using Spdlog in LBANN (#32034) 2022-08-11 11:39:40 +02:00
Brian Van Essen
ce59b33bcf Updated the RDKit dependencies for Boost variants. (#32033) 2022-08-11 11:39:07 +02:00
Glenn Johnson
4d06dcd62f bazel: add patches to compile with gcc-11 (#28548) 2022-08-10 19:04:18 -07:00
Harmen Stoppels
e3fe56abae llvm: fix LLDB_ENABLE_[N]CURSES (#32006) 2022-08-10 19:21:45 -06:00
Richarda Butler
ef818339db Update tests so /tmp/store can be accessed (#32003) 2022-08-10 20:53:48 +00:00
Thomas Gruber
98a540c793 Add LIKWID 5.2.2 (#32031) 2022-08-10 16:49:15 +00:00
Mikael Simberg
f237e669f2 Patch /usr/bin/file to file when on nixos (#30718) 
These changes make many packages build on nixos where nearly nothing
comes from /bin or /usr/bin (the only things in "system locations" are
/bin/sh and /usr/bin/env, all the rest is found through PATH).

Many configuration scripts hardcode /usr/bin/file instead of using the
one from PATH. This patches them to use file from PATH.
 2022-08-10 17:54:09 +02:00
Eric Brugger
9df2c7190f VisIt: fix missing link libs patch for parallel. (#32018) 2022-08-10 17:51:19 +02:00
Robert Cohn
19bebae931 intel-tbb add 2021.4, 2021.5, 2021.6.0-rc and master branch (#31997) 2022-08-10 07:07:26 -07:00
Richard Berger
1cb4b2337f singularity-eos: add dependency to py-pybind11 (#31907) 2022-08-10 04:20:39 -06:00
Filippo Spiga
623eee9a53 arm: add a dependency on "ncurses abi=5' (#31942) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: fspiga <fspiga@users.noreply.github.com>
 2022-08-10 12:15:41 +02:00
Wouter Deconinck
acc848a0f8 gaudi: disentangle variant 'optional' (#31801) 2022-08-10 12:11:13 +02:00
Adam J. Stewart
47b1138ef2 libgta: add new package (#31981) 2022-08-10 11:04:56 +02:00
Seth R. Johnson
5d6ab9a76c core: add a helpful long message for UnknownPackageError (#31996) 
```
Error: Package 'armpl' not found.
```
is pretty useless after an upgrade unless you're a spack pro. I've
recently hit this on multiple machines. See
https://github.com/spack/spack/issues/31453 ,
https://github.com/spack/spack/issues/31489  .
 2022-08-10 11:01:07 +02:00
Jim Edwards
13bcf82851 parallelio: update config (#31868) 2022-08-10 10:53:04 +02:00
Adam J. Stewart
b7358cc6d6 py-pytorch-lightning: add v1.7.1 (#32020) 2022-08-10 02:25:56 -06:00
Axel Huebl
b6ed343b18 WarpX: add v22.08 (#31849) 2022-08-10 10:25:26 +02:00
Harmen Stoppels
857a798aed modules: add missing Python imports (#32012) 2022-08-10 10:00:33 +02:00
Adam J. Stewart
03a91df81a libjxl: add new package (#31983) 2022-08-10 09:20:07 +02:00
Axel Huebl
e7d8a7765b ADIOS2: ZFP<1.0 (#32015) 
* ADIOS2: ZFP<1.0

The tagged ADIOS2 releases in Spack (and develop) do not yet
work with ZFP 1.0. Express valid depedency range before someone
updates the ZFP package and triggers the incompatibility.

* Use semver
 2022-08-10 00:35:03 -06:00
iarspider
ddb83ed776 Add checksum for py-setuptools-rust 1.2.0 and 1.4.1 (#32009) 
* Add checksum for py-setuptools-rust 1.2.0 and 1.4.1

* Update var/spack/repos/builtin/packages/py-setuptools-rust/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

* Update package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-08-09 16:53:57 -06:00
iarspider
6a30a5c8d7 Add checksum for py-pynacl 1.5.0 (#31988) 
* Add checksum for py-pynacl 1.5.0

* Update package.py
 2022-08-09 10:25:28 -07:00
iarspider
0d97d05ccb Add checksum for new py-semantic-version versions (#32010) 2022-08-09 10:24:48 -07:00
Tamara Dahlgren
3320c983a7 Reduce installation noise: filter path padding and make some details debug level 2 (#31998) 2022-08-09 19:22:09 +02:00
Adam J. Stewart
d29d5462c6 PythonPackage: add --config-settings support (#31823) 2022-08-09 10:09:51 -07:00
Adam J. Stewart
bc32b2c22c py-gpytorch: add v1.8.1 (#32001) 2022-08-09 09:45:35 -07:00
Jose E. Roman
bce3369325 New patch release SLEPc 3.17.2 (#32007) 2022-08-09 09:44:34 -07:00
iarspider
8598da337d Add checksum for py-pyjwt 2.4.0 (#31987) 2022-08-09 08:05:53 -06:00
Harmen Stoppels
f53b522572 Add base class for directory visitor (#32008) 2022-08-09 15:43:30 +02:00
Massimiliano Culpo
b61187455a Update release procedure, keep CHANGELOG up-to-date (#31969) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2022-08-09 12:10:49 +00:00