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Author SHA1 Message Date
Peter Scheibel
55bbb10984 Alert user to failed concretizations (#42655) 
With this change an error message is emitted when the result of concretization 
is in an inconsistent state.
 2024-02-23 20:15:25 +01:00
Simon Pintarelli
6e37f873f5 tiled-mm: add v2.3 (#42829) 2024-02-23 19:53:51 +01:00
Massimiliano Culpo
d49cbecf8c Cleanup spack.schema (#42815) 
* Move spec_list into its own file, instead of __init__.py

* Remove spack.schema.spack

This module was introduced in #33960 It's almost an exact duplicate of
spack.schema.env, and is not used anywhere.

* Fix typo
 2024-02-23 10:23:54 -08:00
Dr Marco Claudio De La Pierre
fe07645e3b Update/add packages in the Nextflow ecosystem (#42776) 
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
 2024-02-23 17:53:46 +01:00
Ben Morgan
c5b8d5c92a geant4: new version v11.2.1 (#42822) 2024-02-23 08:07:35 -05:00
Jeremy Fix
2278816cb3 py-jwcrypto: new package (#42783) 
* adds the spack recipe for py-jwcrypto

* split long line to fix E501

* Specify versions for py-cryptography and py-typing-extensions

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:58:11 -07:00
Jeremy Fix
4bd305b6d3 py-reacton: new package (#42794) 
* adds the spack recipe for reacton python package

* Fix versions for ipywidgets and typing-extensions

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:48:06 -07:00
Erik Heeren
a26e0ff999 py-find-libpython: new package (#42804) 
* py-find-libpython: new package

* Update var/spack/repos/builtin/packages/py-find-libpython/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:42:58 -07:00
Jeremy Fix
4550fb83c0 py-ipyvue: new package (#42789) 
* add spack recipe for ipyvue

* Specify version for ipywidgets

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:37:48 -07:00
Todd Gamblin
5b96c2e89f py-sympy: add version 1.12 (#42770) 2024-02-23 05:42:49 -06:00
Sinan
18c8406091 pdal: fix version range for patch (#42769) 
* Update package.py

fix bug.

* Update var/spack/repos/builtin/packages/pdal/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:28:41 -06:00
Caetano Melone
bccefa14cb py-codespell: add package (#42694) 
* py-codespell: add package

* setuptools-scm conflict

confirmed via https://github.com/codespell-project/codespell/issues/3365

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* reorder dependencies and versions

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 05:07:24 -06:00
Maciej Wójcik
20fc5a174a py-s3transfer, py-boto3, py-botocore: add new versions (#42741) 
* py-s3transfer: add new versions

* py-boto3: add new versions

* py-botocore: add new versions

* py-boto3: correct version ranges
 2024-02-23 04:18:45 -06:00
Alec Scott
3abcb408d1 py-ansible: add v2.16.3 (#42734) 
* py-ansible: add v2.16.3

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Add specific python version requirements from setup.cfg

* Add additional ranges for py-setuptools

* Update var/spack/repos/builtin/packages/py-ansible/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-23 04:13:33 -06:00
Maciej Wójcik
a0d97d9294 py-argparse-dataclass: add new package (#42494) 
* py-argparse-dataclass: add new package

* Remove obvious dependency
 2024-02-23 04:11:21 -06:00
Massimiliano Culpo
0979a6a875 Remove dead code from Environment (#42818) 
Environment.concretize_and_add is not used anywhere.
 2024-02-23 10:48:07 +01:00
Massimiliano Culpo
98de8e3257 Fix wrong call to a function (#42814) 2024-02-23 06:37:22 +01:00
akimler
23b299c086 matio: add v1.5.26 (#42808) 2024-02-23 06:03:06 +01:00
Massimiliano Culpo
adcd3364c9 elpa: remove deprecated versions (#42802) 2024-02-23 06:02:06 +01:00
Tom Payerle
a2908fb9f7 qb3: add custom libs property (#42275) 2024-02-22 15:13:05 -07:00
John W. Parent
f514e72011 netcdf-c package: fix hdf5 linking on Windows (#42749) 2024-02-22 14:18:34 -07:00
Adam J. Stewart
b61d964eb8 PythonPackage: check purelib for libs/headers (#42602) 
* PythonPackage: check purelib for libs/headers

* Update error messages too

* Fix functools.reduce argument order
 2024-02-22 13:17:21 -08:00
John W. Parent
2066eda3cd Seacas package: add Windows support (#42692) 2024-02-22 13:28:33 -07:00
Alex Richert
d8b186a381 dakota: add boost components (#42659) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2024-02-22 13:03:13 -07:00
Adam J. Stewart
d258aec099 GDAL: add v3.8.4 (#42805) 2024-02-22 11:42:14 -08:00
Harmen Stoppels
3d1d5f755f oci: when base image uses Image Manifest Version 2, follow suit (#42777) 2024-02-22 16:33:56 +01:00
Thomas-Ulrich
90778873d1 tandem: update package (#42785) 2024-02-22 15:45:20 +01:00
AMD Toolchain Support
1af57e13fb elpa: fix support for patched version (#42803) 
Co-authored-by: Ning Li <ning.li@amd.com>
 2024-02-22 15:43:12 +01:00
AMD Toolchain Support
28d25affcc ELPA: Linking fixes for BLAS and OpenMP (#42747) 
Co-authored-by: Phil Tooley <phil.tooley@amd.com>
 2024-02-22 15:21:00 +01:00
Martin Lang
3ebaf33915 libgd: fix INT_MAX not defined (#42104) 
Compiling version 2.2.4 fails (on a Debian system with only a minimum set of packages installed) with an error because `INT_MAX` is undeclared:
```
   263    gd_gd2.c: In function '_gd2GetHeader':
>> 264    gd_gd2.c:212:54: error: 'INT_MAX' undeclared (first use in this function)
   265      212 |                 if (*ncx <= 0 || *ncy <= 0 || *ncx > INT_MAX / *ncy) {
   266          |                                                      ^~~~~~~
   267    gd_gd2.c:87:1: note: 'INT_MAX' is defined in header '<limits.h>'; did you forget to '#include <limits.h>'?
```
 2024-02-22 03:23:59 -07:00
Alec Scott
e8d981b405 rust: add v1.76.0 (#42798) 2024-02-22 03:09:31 -07:00
Steven Hahn
02f222f6a3 google benchmark: Add variant with libpfm4 (#42620) 
Signed-off-by: Steven Hahn <hahnse@ornl.gov>
 2024-02-22 07:29:49 +01:00
James Beal
8345c6fb85 delly2: add v1.2.6 (#42745) 
Co-authored-by: James Beal <jb23@sanger.ac.uk>
 2024-02-22 07:28:40 +01:00
Xavier Delaruelle
3f23634c46 environment-modules: add version 5.4.0 (#42763) 2024-02-22 07:10:55 +01:00
MatthewLieber
d5766431a0 mvapich: add v3.0 (#42756) 
Co-authored-by: Matt Lieber <lieber.31@osu.edu>
 2024-02-22 07:09:14 +01:00
Martin Lang
1388bfe47d bigdft-atlab: add v1.9.3, v1.9.4 (#42643) 2024-02-22 07:05:00 +01:00
dependabot[bot]
579dec3b35 build(deps): bump urllib3 from 2.2.0 to 2.2.1 in /lib/spack/docs (#42757) 
Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.2.0 to 2.2.1.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/2.2.0...2.2.1)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-02-22 07:01:45 +01:00
Martin Lang
9608ed9dbd cgal: add v5.5.3 (#42650) 2024-02-22 06:58:03 +01:00
Wouter Deconinck
42b739d6d5 podio: depends_on py-graphviz type run (for podio-vis) (#42787) 
The podio-vis tool depends at run-time on py-graphviz, https://github.com/AIDASoft/podio/blob/master/tools/podio-vis#L10.
 2024-02-22 06:14:38 +01:00
Matthieu Dorier
91a0c71ed1 nlohmann-json-schema-validator: added version 2.2.0 and 2.3.0 (#42792) 2024-02-22 06:11:29 +01:00
Dom Heinzeller
6ee6fbe56b ecflow: apply ctsapi_cassert.patch for all compilers (#42793) 2024-02-22 06:09:54 +01:00
Mikael Simberg
be4eae3fa8 pika: add sanitizers variant (#42778) 2024-02-22 05:54:33 +01:00
Harmen Stoppels
ad70b88d5f spack gc: do not show uninstalled but needed specs (#42696) 2024-02-22 05:21:39 +01:00
eugeneswalker
c1d230f25f e4s ci stacks: add python packages (#42774) 
* e4s ci stacks: add python packages

* comment out failing specs
 2024-02-21 20:59:05 -07:00
John W. Parent
4bc52fc1a3 env activate: use Win-compatible print on Windows (#42755) 
Use "echo" instead of "printf" on Windows.
 2024-02-21 11:02:04 -08:00
John W. Parent
7d728822f0 Windows: fix error with can_symlink check (#42753) 2024-02-21 10:18:25 -08:00
John W. Parent
e96640d2b9 cgns package: don't use MPI wrappers on Windows (#42750) 2024-02-21 10:10:48 -08:00
Alex Richert
e196978c7c Add 'docs' variant to rust-bootstrap (#42768) 
* Add 'docs' variant to rust-bootstrap

* remove docs for rust-bootstrap
 2024-02-21 11:04:13 -07:00
Harmen Stoppels
de3d1e6c66 rocm: removal of deprecated <5.1 versions (#42676) 
The package `aomp` is removed entirely, as it was too outdated to have non-deprecated dependencies.
 2024-02-21 14:07:40 +01:00
Massimiliano Culpo
2d8e0825fe binutils: add v2.42 (#42760) 2024-02-20 23:03:51 -08:00