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11003 Commits

Author SHA1 Message Date
Sinan
7b6e1ae9d3 py-astunparse: add version 1.6.3 (#16946) 
Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
 2020-06-06 15:50:16 -05:00
darmac
c5ac168f31 protobuf: support aarch64 @2.5.0 (#16862) 
* protobuf: support aarch64 @2.5.0

* refine cmake args

* fix patch name
 2020-06-06 15:47:30 -05:00
Nithin Senthil Kumar
944f0abb36 Update package for MVAPICH2 2.3.4 release (#16960) 
Co-authored-by: senthilkumar.16 <senthilkumar.16@nowlab.cse.ohio-state.edu>
 2020-06-06 12:51:27 +02:00
John Jolly
d755cc8ce9 iegenlib: add build dependencies for automake and libtool (#16980) 2020-06-06 09:55:14 +02:00
Andrew Gaspar
374f1a62e2 py-flake8: add version 2.8.2 (#16959) 
* py-flake8: add version 3.8.2
  * This version depends on different versions of py-pycodestyle
    and py-pyflakes
  * When built for python@:3.7, this depends on the
    py-importlib-metadata backport library
* py-pycodestyle: add version 2.6.0
* py-pyflakes: add version 2.2.0
 2020-06-05 18:25:42 -07:00
Amjad Kotobi
27eb7d9f5f xrootd: add version 4.12.1 (#16966) 2020-06-05 18:18:00 -07:00
Sinan
a08f3dd505 New package: py-asteval (#16976) 2020-06-05 18:16:13 -07:00
Michael Kuhn
bfa05628cb pkgconf: Add 1.7.3 2020-06-05 18:14:20 -07:00
Christoph Junghans
76abf35813 cajita: got merged in cabana (#16971) 2020-06-05 12:38:07 -06:00
Tomoki, Karatsu
89cc507cf6 cmake: add linker option for VerifyFortranC when using Fujitsu compiler. (#16963) 2020-06-05 13:29:36 +02:00
Tomoki, Karatsu
c3be6d903a cmake: modify FindMPI.cmake to treat Fujitsu MPI correctly (#16864) 2020-06-05 13:25:02 +02:00
Tomoki, Karatsu
8be7823cc5 suite-sparse: change the condition to add C11 flag. (#16859) 2020-06-05 13:17:41 +02:00
eugeneswalker
92e24950e5 add erlang version 23.0 (#16961) 2020-06-04 22:49:46 -07:00
Andrew Gaspar
0d43e41da0 Rust v1.44.0 (#16957) 
* libgit2 v1.0.1

* Rust 1.44.0

* Fix flake8
 2020-06-04 16:59:14 -05:00
Andrew Gaspar
0a3601a3f1 libgit2 v1.0.1 (#16952) 2020-06-04 16:34:19 -05:00
eugeneswalker
44ec8cc4e4 sz: patch in ctag optionality from robertu94/sz 3637a87f986c (#16953) 2020-06-04 09:16:11 -07:00
eugeneswalker
b64ec7fba4 pass hwloc to configure via useropt; use lib/ or lib64/ as appropriate for libunwind (#16941) 2020-06-04 06:58:33 -07:00
Adam J. Stewart
7617054a5d Fix obsolete references to wx package (#16944) 2020-06-04 08:05:48 -05:00
Adam J. Stewart
0dd1d1f21a NumPy: add 1.18.5 (#16943) 2020-06-04 08:05:22 -05:00
iarspider
ad50a02188 Add matplotlib 3.1.0 (#16921) 2020-06-03 22:26:13 -05:00
iarspider
6f4631ee48 Add py-jupyter-core@4.6.1 (#16922) 2020-06-03 22:25:38 -05:00
Seth R. Johnson
104a0c4259 Trilinos: add Stratimikos package (#16925) 
Stratimikos is an optional dependency for our project. It depends on
Thyra, and thyra has subpackages that should be enabled based on
tpetra/epetra/epetraext.
 2020-06-03 22:25:09 -05:00
Mathew Cleveland
02548c56fa + Add opppy-0_1_3 (#16926) 
+ Update maintainers for OPPPY package
+ remove "run" requirement for setuptools and sphynx

Co-authored-by: Cleveland <cleveland@lanl.gov>
 2020-06-03 22:16:46 -05:00
iarspider
16e8e434c2 Add pytest@5.3.4 (#16927) 
Dropping atomicwrites dependency: https://github.com/pytest-dev/pytest/issues/6147
 2020-06-03 22:15:01 -05:00
Seth R. Johnson
6f6c243699 mpfr: update hash for 4.0.2 patch (#16937) 2020-06-03 22:11:44 -05:00
Adam J. Stewart
61f61f3cde py-openpyxl: add 3.0.3 (#16940) 2020-06-03 22:09:58 -05:00
Adam J. Stewart
5a7b555314 IPython: fix setuptools dependency (#16915) 
* IPython: fix setuptools dependency

* Remove extra colon
 2020-06-03 22:09:40 -05:00
Tom Payerle
0fb671a19e Gnuplot fix 16928 (#16929) 
* gnuplot: Fix for #16928

Dependency for --with-wx flag mistyped (should be wxwidgets)

* Revert "gnuplot: Fix for #16928"

This reverts commit 2b85814e5c.

* gnuplot: Fix for #16928

Dependency spec for --with-wx flag mistyped (should be wxwidgets, not
wx)
 2020-06-03 22:08:07 -05:00
shanedsnyder
748be57790 update darshan-runtime & darshan-util versions (#16934) 
* update darshan-runtime & darshan-util versions

includes up through the current release, 3.2.1

* remove pre-releases, not needed in spack
 2020-06-03 18:05:46 -07:00
eugeneswalker
0086c47546 patch lambda capture issue for @1.1906.1, fixed in upstream faodel@master (#16935) 2020-06-03 11:38:27 -07:00
Greg Becker
3347ef2de4 Feature: add option to create view by copying/relocating files (#16480) 
* add subcommand `spack view copy/relocate`

* update bash completions

* add copy/relocate commands to view tests

* allow copied views to be removed
 2020-06-03 09:45:13 -07:00
dmorone
600e2cfc4f amber: updated dependency constraint on cuda (#16919) 
Fix message 'amber requires cuda version :10.1.243, but spec asked for 10.2.89'
 2020-06-03 13:17:36 +02:00
Amjad Kotobi
eed82a19be openssh: added v8.3p1 and v8.1p1 (#16917) 2020-06-03 11:28:42 +02:00
Amjad Kotobi
417eb3c5b1 git: added v2.27.0 (#16918) 2020-06-03 11:24:08 +02:00
Justin S
5604c8d91a mummer4: new package at 4.0.0-beta2 (#16907) 2020-06-02 22:09:39 -05:00
Robert Blake
0e71e8716a Add new package: sbml (#16898) 
* Adding a module for sbml.

* Adding support for all the languages.

* Update var/spack/repos/builtin/packages/sbml/package.py

Co-authored-by: Greg Becker <becker33@llnl.gov>

* Update var/spack/repos/builtin/packages/sbml/package.py

Co-authored-by: Greg Becker <becker33@llnl.gov>

Co-authored-by: Robert Blake <rob.c.blake.3@gmail.com>
Co-authored-by: Greg Becker <becker33@llnl.gov>
 2020-06-02 17:54:50 -07:00
Adam J. Stewart
7f086af05e Ruby: add warning about Avira antivirus (#16882) 2020-06-02 15:05:50 -07:00
Toyohisa Kameyama
76142124d2 alsa-lib: Add new version and python dependency. (#16905) 
Add version 1.2.2.
Add conditional python dependency.
Add patch for 1.1.4.1 and python.
 2020-06-02 14:23:14 -07:00
Justin S
5d37439a7b gmap-gsnap: add 2020-06-01 (#16906) 2020-06-02 14:21:00 -07:00
Chuck Atkins
5ace804dc2 Bump ADIOS to 2.6.0 (#16908) 2020-06-02 14:15:23 -07:00
iarspider
9a17d48455 Add ipython 7.5.0 (#16801) 
* Add ipython 7.5.0

* Update dependencies

* Update package.py
 2020-06-02 15:09:35 -05:00
takanori-ihara
b60ab6eefd ruby: fixed build with Fujitsu compilers (#16889) 2020-06-02 11:07:48 +02:00
Xavier Delaruelle
c7851f896c environment-modules: added v4.5.1 (#16896) 2020-06-02 11:06:02 +02:00
takanori-ihara
0875c6a5d0 py-grpcio: fixed build with Fujitsu compilers (#16900) 2020-06-02 10:55:55 +02:00
Axel Huebl
6aa0e9944e ccache: added v3.7.9 (#16902) 
Add the latest CCache release. Fixes issues with `-x cu` that are
not present in the last checksummed release. This fixes workflows
with CMake.
 2020-06-02 10:53:12 +02:00
Sinan
7f2db5c5b0 qt: add conflict for old gcc (#16904) 
Co-authored-by: Sinan81 <Sinan81@github>
 2020-06-02 10:51:35 +02:00
Michael Kuhn
6035b32748 go: added v1.14.4 and v1.13.12 (#16903) 2020-06-02 10:48:35 +02:00
Jonathon Anderson
feda2a3073 openmpi: add opa-psm2 dependency (#16873) 
Also document with_or_without and enable_or_disable, (which are used
to configure the opa-psm2 dependency).
 2020-06-01 15:33:24 -07:00
Amjad Kotobi
ab6905d5fa r-exactextractr: package type fixed (#16881) 
* r-exactextractr: should inherit from RPackage
* r-exactextractr: fixed URL
 2020-06-01 14:01:41 -07:00
t-karatsu
9741de504f netcdf-cxx4: Add 'doxygen' dependency. 2020-06-01 13:56:07 -07:00