* New version: py-pyrsistent 0.18.0
* Update package.py
* Update var/spack/repos/builtin/packages/py-pyrsistent/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* New version: py-pytest 6.2.5
* Update var/spack/repos/builtin/packages/py-pytest/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Use setup_run_environment to search for libraries and set env variables for module generation.
Libraries are installed with CMAKE_INSTALL_LIBDIR, which can be lib or lib64 depending on the machine, which makes it impossible to hardcode through modules.yaml.
If the perl that perl-forks is built against is non-threaded the build
system will drop into interactive mode to ask about simulating ithreads.
This causes the build to hang. Set FORKS_SIMULATE_USEITHREADS to avoid
going into interactive mode.
If building Qt on a system with a recent glibc but an older kernel, it
is possible that Qt configures features based on glibc that are not
supported in the kernel. This PR tests the kernel version and ensures
certain features are disabled if the kernel does not support them.
* New version: py-prettytable 2.4.0; update homepage
* Update var/spack/repos/builtin/packages/py-prettytable/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* New version: py-prometheus-client 0.12.0; new dependency (py-twisted) version 21.7.0 + it's dependencies
* Apply suggestions from code review (1/?)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Changes from review (2/?)
* Changes from review (3/?)
* Changes from review (4/?)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
- disable graphblas by default (very slow to compile)
- fix patch upperbound for cuda 11
- remove find_system_libs; not sure why it was added in the first place,
but it makes spack rather unusable as it introduces an rpath to /lib/...
* New version: py-oauthlib 3.1.1
* Update var/spack/repos/builtin/packages/py-oauthlib/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Generalize env var PYTHON to avoid version conflicts
* Use available python executable
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* upcxx: Update the UPC++ package to 2021.9.0
* Add the new release, and a missing older one.
* Remove the spack package cruft for supporting the obsolete build system that
was present in older versions that are no longer supported.
* General cleanups.
Support for library versions older than 2020.3.0 is officially retired,
for two reasons:
1. Releases prior to 2020.3.0 had a required dependency on Python 2,
which is [officially EOL](https://www.python.org/doc/sunset-python-2/)
as of Jan 1 2020, and is no longer considered secure.
2. (Most importantly) The UPC++ development team is unable/unwilling to
support releases more than two years old. UPC++ provides robust
backwards-compatibility to earlier releases of UPC++ v1.0, with very
rare well-documented/well-motivated exceptions. Users are strongly
encouraged to update to a current version of UPC++.
NOTE: Most of the lines changed in this commit are simply re-indentation,
and thus might be best reviewed in a diff that ignores whitespace.
* upcxx: Detect Cray XC more explicitly
This change is necessary to prevent false matches occuring on new Cray Shasta
systems, which do not use the aries network but were incorrectly being treated
as a Cray XC + aries platform.
UPC++ has not yet deployed official native support for Cray Shasta, but this
change is sufficient to allow building the portable backends there.
* py-setupmeta: add new package
* Update var/spack/repos/builtin/packages/py-setupmeta/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add hdf5-vol-async package.
Add HDF5 1.13.0-rc6 version for building vol-async.
* Style test required another blank line.
* Change hdf5 dependency to develop-1.13+mpi+threadsafe.
* Update args for hdf5-vol-async.
Open MPI currently fails to build with scheduler=slurm if +pmix is
not given with a fatal error due to ``config_args +=
self.with_or_without('pmix', ...)`` resulting in --without-pmix.
However, Open MPI's configure points out "Note that Open MPI does
not support --without-pmix."
The PR only adds "--with-pmix=PATH" if +pmix is part of the spec.
Otherwise, nothing is added and Open MPI can fall back to its
internal PMIX sources.
(The other alternative would be to depend on +pmix in for
scheduler=slurm as is done for +pmi.)
- Added new checksums for 4.3.
- Now using llvm-amdgpu ~openmp in order to use the rocm-device-libs
build as external project in llvm-amdgpu package. We still need
to pull device-libs in using resource for the build as some headers
are not installed.
- Updated symlink creation to now remove an existing link if present
to avoid issues on partial reinstalls when debugging.
- Adjusted the flang_warning to be a part of Cmake options instead of
a filter_file for better compatability.
- The dependency on hsa-rocr-dev created some problems as type was changed
to the default build/link. This issue was because ROCr uses libelf and
the build of openmp expects elfutils. When link is specified libelf
was being found in the path first, causing errors. This was
introduced with the llvm-amdgpu external project build of device-libs.
- On a bare bone installation of sles15 it was noted that libquadmath0 was
needed as a dependency. On 18.04 gcc-multilib was also needed.
* Workaround for libelf headers being used instead of elfutils.
Due to Kitware API changes, default ANTs builds were failing, presumably for all versions (https://github.com/ANTsX/ANTs/issues/1236).
This commit defaults BUILD_TESTING to OFF, preventing calls against
these APIs and fixing all versions.
Note that the ANTs test suite was not clean anyway (e.g. ANTs/#842).
* New version: py-lz4 3.1.3; use external lz4 instead of bundled one
* Update var/spack/repos/builtin/packages/py-lz4/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Changes from review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add spack package py-ytopt-team-ytopt and required dependencies.
* Removed old ytop package.
* Added author as maintainer.
* Fix style.
* Update var/spack/repos/builtin/packages/py-config-space/package.py
Update python dependency to 3.7
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-config-space/package.py
Remove run dependency from py-cython.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-config-space/package.py
Added run dependency type for py-pyparsing.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Updated description of py-dh-scikit-optimize.
* Source py-dh-scikit-optimize from PyPI.
* Added latest py-dh-scikit-optimize version.
* Made plots option False by default for py-dh-scikit-optimize.
* Removed 0.9.4 as it needs additional dependencies.
* Added version dependencies.
* Added missing py-joblib dependencies.
* Added run dependency type.
* Added python 2.7+ as supported for py-pyaml.
* Change py-config-space to py-configspace.
* Added dependency on python 3.6+.
* Fix py-configspace package naming.
* Changed py-autotune to py-ytopt-autotune.
* Update var/spack/repos/builtin/packages/py-pyaml/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Added debug variant with py-ray dependency.
* Added missing py-mpi4py missing dependency.
* Removed erroneous variant.
* Added debug variant to py-ray.
* Fix indentation.
* Removed debug variant of py-ray.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Noting that missing numeric_limits was the cause of the compile issues
with gcc-11, I tested adding -include limits fixing @5.9:5.14%gcc@11.
Therefore, we can replace the conflicts('%gcc@11:', when='@5.9:5.14').
Co-authored-by: Bernhard Kaindl <bernhard.kaindl@ait.ac.at>
ensure that none of ^intel-mkl, ^intel-mpi, and ^mkl are used, unless
the compiler is intel.
Fix bad logic in the src/src_xs/m_makespectrum.f90 file in the oxygen version.
Add the -fallow-argument-mismatch for gcc >= 10.
* scr: 3.0rc2 release, variants and deps updates
This adds 3.0rc2 release for end users to aid in testing scr for
upcoming 3.0 release.
Included in this change:
- Require most recent component versions for this release
- Add a variant for PDSH as it is now an optional dependency with
this release
- Add bbapi and datawarp (dw) variants
- bbapi_fallback variant now requires bbapi variant with latest
release
- Add variants to enable/disable examples and tests
- Add shared variant and current conflicts with ~shared
- Update cmake_args to account for added variants where needed
Additional updates:
- Add maintainers
- Use lists and for loops to clean up repetitive code involving all
components
- Use self.define and self.define_from_variant to clean up cmake_args
- Use consistent quoting throughout package
* Un-deprecate v2 and legacy
* Use new conditional variants
The Makefile expects the "other" libtool, not the GNU libtool we have in Spack.
Closes https://github.com/spack/spack/issues/26993
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
