Commit Graph

38603 Commits

Author SHA1 Message Date
psakiev
ab5c2d5f7c Fixes 2024-11-12 16:09:16 -07:00
psakiev
4d49a658c8 Add completion 2024-11-12 15:28:34 -07:00
psakiev
973f59abbc Merge remote-tracking branch 'origin' into psakiev/dev-build 2024-11-12 13:18:16 -07:00
psakiev
4216a06cd8 Add build-env --dive 2024-11-12 13:16:59 -07:00
Paul Gessinger
3dadf569a4
geomodel: Allow configuring C++ standard (#47422)
* geomodel: Allow configuring C++ standard

* drop c++11
2024-11-12 14:41:14 -05:00
Alec Scott
751585f1e3
glab: add v1.48.0 (#47552) 2024-11-12 12:07:34 -07:00
Wouter Deconinck
f6d6a5a480
parsec: update urls (#47416)
* parsec: update urls
* parsec: fix homepage
2024-11-12 11:31:57 -07:00
Matthieu Dorier
57a1ebc77e
xfsprogs: fix dependency on gettext (#47547)
* xfsprogs: fix dependency on gettext

* changed dependency on gettext in xfsprogs

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-11-12 11:20:48 -07:00
Wouter Deconinck
acdcd1016a
openssh: add v9.9p1 (#47555) 2024-11-12 10:04:12 -08:00
Matthieu Dorier
e7c9bb5258
py-constantly: add v23.10.4 (#47548)
* py-constantly: added version 23.10.4
* py-constantly: fixed dependency on py-versioneer
* py-constantly: updated py-versioneer dependency

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-11-12 09:53:34 -08:00
teddy
e083acdc5d
costo: new package and to fix the build, add pkgconfig dep to vtk (#47121)
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-11-12 17:04:20 +01:00
Sebastian Pipping
99fd37931c
expat: Add 2.6.4 with security fixes + deprecate vulnerable 2.6.3 (#47521) 2024-11-12 07:10:00 -07:00
Harmen Stoppels
00e68af794
llvm-amdgpu: add missing dependency on libxml2 (#47560) 2024-11-12 14:51:33 +01:00
Harmen Stoppels
e33cbac01f
getting_started.rst: fix list of spack deps (#47557) 2024-11-12 08:59:07 +01:00
Wouter Deconinck
ada4c208d4
py-cryptography: add v43.0.3 (switch to maturin) (#47546)
* py-cryptography: add v43.0.3 (switch to maturin)
* py-cryptography: deny some setuptools versions
* py-cryptography: depends_on py-setuptools-rust when @42, no range

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-11-11 22:09:33 -07:00
Xavier Delaruelle
91310d3ae6
environment-modules: add version 5.5.0 (#47543)
This new version is compatible with Tcl 9.0. It also requires
'util-linux' for new logging capabilities.
2024-11-11 21:45:03 -07:00
Tim Haines
def1613741
gdb: add version 15.2 (#47540) 2024-11-11 21:44:33 -07:00
Mosè Giordano
ac703bc88d
prometheus: add v2.55.1 (#47544) 2024-11-11 21:34:32 -07:00
Mikael Simberg
f0f5ffa9de
libunwind: Add 1.7.2, 1.8.1, and new *-stable branches (#47412)
* libunwind: Add 1.7.2 and 1.8.1
* libunwind: Remove deprecated 1.1 version
* libunwind: Add newer *-stable branches: Remove 1.5-stable branch as well as cleanup.
* libunwind: Use GitHub url for all versions
* libunwind: Add conflict for PPC and 1.8.*
* libunwind: Add conflict for aarch64 and 1.8:
   Build fails with

   aarch64/Gos-linux.c: In function '_ULaarch64_local_resume':
   aarch64/Gos-linux.c:147:1: error: x29 cannot be used in asm here
    }
    ^
   aarch64/Gos-linux.c:147:1: error: x29 cannot be used in asm here
   make[2]: *** [Makefile:4795: aarch64/Los-linux.lo] Error 1
2024-11-11 18:17:36 -08:00
Alberto Sartori
65929888de
justbuild: add version 1.4.0 (#47410) 2024-11-11 18:15:07 -08:00
Luke Diorio-Toth
2987efa93c
packages: new versions (diamond, py-alive-progress, py-bakta, py-deepsig-biocomp), new packages (py-pyhmmer, py-pyrodigal) (#47277)
* added updated versions
* added pyhmmer
* updated infernal
* fix blast-plus for apple-clang
* fix py-biopython build on apple-clang
* remove erroneous biopython dep: build issue is with python 3.8, not biopython
* deepsig python 3.9: expanding unnecessary python restrictions
* add pyrodigal
* fix unnecessarily strict diamond version
* builds and updates: blast-plus indexing broken, still need to test db download and bakta pipeline
* builds and runs
* revert blast-plus changes: remove my personal hacks to get blast-plus to build
2024-11-11 18:13:46 -08:00
Tim Haines
37de92e7a2
extrae: Update dyninst dependency (#47359) 2024-11-11 18:09:03 -08:00
Sreenivasa Murthy Kolam
42fd1cafe6
Fix the build error during compilation of rocdecode package (#47283)
* fix the build error during compilation of rocdecode.was dependent on libva-devel packag
* address review comment
* address review changes.commit the changes
2024-11-11 18:05:21 -08:00
MatthewLieber
370694f112
osu-micro-benchmarks: add v7.5 (#47423)
* Adding sha for 7.4 release of OSU Micro Benchmarks
* Adds the sha256sum for the OSU mirco benchmarks 7.5 release.
2024-11-11 18:01:39 -08:00
Wouter Deconinck
fc7125fdf3
py-fsspec-xrootd: new package (#47405)
* py-fsspec-xrootd: new package
* py-fsspec-xrootd: depends_on python@3.8:
2024-11-11 17:58:18 -08:00
Stephen Herbener
3fed708618
openmpi: add two_level_namespace variant for MacOS (#47202)
* Add two_level_namespace variant (default is disabled) for MacOS to enable building
executables and libraries with two level namespace enabled.
* Addressed reviewer comments.
* Moved two_level_namespace variant ahead of the patch that uses that variant to
get concretize to work properly.
* Removed extra print statements
2024-11-11 17:55:28 -08:00
renjithravindrankannath
0614ded2ef
Removing args to get libraries added in RPATH (#47465) 2024-11-11 17:54:19 -08:00
Satish Balay
e38e51a6bc
superlu-dist: add v9.1.0, v9.0.0 (#47461)
Fix typo wrt @xiaoyeli
2024-11-11 19:52:19 -06:00
Wouter Deconinck
c44c938caf
rsyslog: add v8.2410.0 (fix CVE) (#47511)
* rsyslog: add v8.2410.0
2024-11-11 17:50:02 -08:00
Wouter Deconinck
cdaacce4db
varnish-cache: add v7.6.1 (#47513) 2024-11-11 17:47:53 -08:00
Wouter Deconinck
b98e5886e5
py-pyppeteer: new package (#47375)
* py-pyppeteer: new package
* py-pyee: new package (v11.1.1, v12.0.0)
2024-11-11 17:44:28 -08:00
Wouter Deconinck
09a88ad3bd
xerces-c: add v3.3.0 (#47522) 2024-11-11 17:30:30 -08:00
Wouter Deconinck
4d91d3f77f
scitokens-cpp: add v1.1.2 (#47523) 2024-11-11 17:28:06 -08:00
Wouter Deconinck
b748907a61
pixman: add v0.44.0 (switch to meson) (#47529)
* pixman: add v0.44.0 (switch to meson)
2024-11-11 17:26:29 -08:00
Wouter Deconinck
cbd9fad66e
xtrans: add v1.5.2 (#47530) 2024-11-11 17:22:32 -08:00
Wouter Deconinck
82dd33c04c
git: add v2.46.2, v2.47.0 (#47534) 2024-11-11 17:21:27 -08:00
teddy
31b2b790e7
py-non-regression-test-tools: add v1.1.4 (#47520)
Co-authored-by: t. chantrait <teddy.chantrait@cea.fr>
2024-11-11 18:57:00 -06:00
Alec Scott
9fd698edcb
fzf: add v0.56.2 (#47549) 2024-11-11 16:15:34 -08:00
Alec Scott
247446a8f3
bfs: add v4.0.4 (#47550) 2024-11-11 16:12:48 -08:00
psakiev
2acf90f7b7 WIP unify 2024-11-11 17:06:04 -07:00
psakiev
8d5e71f66b Merge remote-tracking branch 'origin' into psakiev/dev-build 2024-11-11 16:46:55 -07:00
psakiev
9b3c200a07 Add prompt capability to dev_build drop-in 2024-11-11 16:44:48 -07:00
Paul Gessinger
993f743245
soqt: new package (#47443)
* soqt: Add SoQt package

The geomodel package needs this if visualization is turned on.

* make qt versions explicit

* use virtual dependency for qt

* pr feedback

Remove myself as maintainer
Remove v1.6.0
Remove unused qt variant
2024-11-11 17:03:08 -06:00
Harmen Stoppels
786f8dfcce
openmpi: fix detection (#47541)
Take a simpler approach to listing variant options -- store them in variables instead of trying to
roundtrip them through metadata dictionaries.
2024-11-11 14:14:38 -08:00
Harmen Stoppels
4691301eba
Compiler.default_libc: early exit on darwin/win (#47554)
* Compiler.default_libc: early exit on darwin/win

* use .cc when testing c++ compiler if c compiler is missing
2024-11-11 14:12:43 -08:00
eugeneswalker
a55073e7b0
vtk-m %oneapi@2025: cxxflags add -Wno-error=missing-template-arg-list-after-template-kw (#47477) 2024-11-11 13:57:45 -08:00
Harmen Stoppels
484c9cf47c
py-pillow: patch for disabling optional deps (#47542) 2024-11-11 11:55:47 -07:00
Peter Scheibel
9ed5e1de8e
Bugfix: spack find -x in environments (#46798)
This addresses part [1] of #46345

#44713 introduced a bug where all non-spec query parameters like date
ranges, -x, etc. were ignored when an env was active.

This fixes that issue and adds tests for it.

---------

Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-11-11 10:13:31 -08:00
Massimiliano Culpo
4eb7b998e8
Move concretization tests to the same folder (#47539)
* Move concretization tests to the same folder

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* Fix for clingo-cffi

---------

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-11 19:01:24 +01:00
Satish Balay
3b423a67a2
butterflypack: add v3.2.0, strumpack: add v8.0.0 (#47462)
* butterflypack: add v3.2.0

* strumpack: add v8.0.0

* restrict fj patch to @1.2.0

* Update var/spack/repos/builtin/packages/butterflypack/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-11-11 11:18:03 -06:00