Commit Graph

13502 Commits

Author SHA1 Message Date
Massimiliano Culpo
bf3a873a42 package sanity: ensure all variant defaults are allowed values (#20373) 2021-02-17 17:07:26 -08:00
Tamara Dahlgren
802c5bdff7 Tests: enable re-use of post-install tests in smoke tests (#20298) 2021-02-17 17:07:25 -08:00
Andrew W Elble
ab3f1b10db concretizer: try hard to obtain all needed variant_possible_value()'s (#20102)
Track all the variant values mentioned when emitting constraints, validate them
and emit a fact that allows them as possible values.

This modification ensures that open-ended variants (variants accepting any string 
or any integer) are projected to the finite set of values that are relevant for this 
concretization.
2021-02-17 17:07:24 -08:00
Robert Maynard
9499dc4a7e VTK-m: update to specify correct requirements to kokkos (#20097) 2021-02-17 17:07:23 -08:00
Massimiliano Culpo
ecfba13d89 concretizer: each external version is allowed by definition (#20247)
Registering external versions among the lists of allowed ones
generates the correct rules for `version_satisfies`
2021-02-17 17:07:22 -08:00
Massimiliano Culpo
a6d433b937 concretizer: restrict maximizing variant values to MV variants (#20194) 2021-02-17 17:07:22 -08:00
Andrew W Elble
92de484228 concretizer: call inject_patches_variants() on the roots of the specs (#20203)
As was done in the old concretizer. Fixes an issue where conditionally
patched dependencies did not show up in spec (gdal+jasper)
2021-02-17 17:07:21 -08:00
Harmen Stoppels
571e36787b Fix hipcc once more (#20095) 2021-02-17 17:07:20 -08:00
Massimiliano Culpo
63d75cd089 boost: disable find_package's config mode for boost prior to v1.70.0 (#20198) 2021-02-17 17:07:20 -08:00
MichaelLaufer
24fb43cc43 Fixes compile time errors (#20006)
Co-authored-by: michael laufer <michael.laufer@toganetworks.com>
2021-02-17 17:07:19 -08:00
Massimiliano Culpo
1e1a6f4e30 concretizer: remove ad-hoc rule for external packages (#20193)
fixes #20040

Matching compilers among nodes has been prioritized
in #20020. Selection of default variants has been
tuned in #20182. With this setup there is no need
to have an ad-hoc rule for external packages. On
the contrary it should be removed to prefer having
default variant values over more external nodes in
the DAG.
2021-02-17 17:07:18 -08:00
Massimiliano Culpo
22d7937c50 concretizer: swap priority of selecting provider and default variant (#20182)
refers #20040

Before this PR optimization rules would have selected default
providers at a higher priority than default variants. Here we
swap this priority and we consider variants that are forced by
any means (root spec or spec in depends_on clause) the same as
if they were with a default value.

This prevents the solver from avoiding expected configurations
just because they contain directives like:

depends_on('pkg+foo')

and `+foo` is not the default variant value for pkg.
2021-02-17 17:07:18 -08:00
Massimiliano Culpo
d7ffdd76f6 concretizer: treat target ranges in directives correctly (#19988)
fixes #19981

This commit adds support for target ranges in directives,
for instance:

conflicts('+foo', when='target=x86_64:,aarch64:')

If any target in a spec body is not a known target the
following clause will be emitted:

node_target_satisfies(Package, TargetConstraint)

when traversing the spec and a definition of
the clause will then be printed at the end similarly
to what is done for package and compiler versions.
2021-02-17 17:07:17 -08:00
Massimiliano Culpo
b326d59e10 concretizer: prioritize matching compilers over newer versions (#20020)
fixes #20019

Before this modification having a newer version of a node came
at higher priority in the optimization than having matching
compilers. This could result in unexpected configurations for
packages with conflict directives on compilers of the type:

conflicts('%gcc@X.Y:', when='@:A.B')

where changing the compiler for just that node is preferred to
lower the node version to less than 'A.B'. Now the priority has
been switched so the solver will try to lower the version of the
nodes in question before changing their compiler.
2021-02-17 17:07:16 -08:00
Massimiliano Culpo
0ae49821e2 concretizer: allow a bool to be passed as argument for tests dependencies (#20082)
refers #20079

Added docstrings to 'concretize' and 'concretized' to
document the format for tests.

Added tests for the activation of test dependencies.
2021-02-17 17:07:16 -08:00
Massimiliano Culpo
8e1b5f734f concretizer: treat conditional providers correctly (#20086)
refers #20040

This modification emits rules like:

provides_virtual("netlib-lapack","blas") :- variant_value("netlib-lapack","external-blas","False").

for packages that provide virtual dependencies conditionally instead
of a fact that doesn't account for the condition.
2021-02-17 17:07:16 -08:00
Adam J. Stewart
cda34ba20a py-ipykernel: fix bug in phase method (#19986)
* py-ipykernel: fix bug in phase method

* Fix bug in executable calling
2021-02-17 17:07:15 -08:00
Danny Taller
c42ce439e4 hip support for umpire, chai, raja, camp (#19715)
* create HipPackage base class and do some refactoring

* comments and added conflict to raja for openmp with hip
2021-02-17 17:07:14 -08:00
Axel Huebl
d6bd95db2e py-ipykernel: fix install (#19617)
There is a post-install routine in `ipykernel` that needs to be
called for proper registration with jupyter.
2021-02-17 17:07:14 -08:00
Massimiliano Culpo
532fc40e94
clingo: add master branch version (#19958)
* updated @master to point to the master branch
* also added a @spack that points to a fixed commit
2020-11-18 04:21:55 -08:00
Greg Becker
77b2e578ec
spack test (#15702)
Users can add test() methods to their packages to run smoke tests on
installations with the new `spack test` command (the old `spack test` is
now `spack unit-test`). spack test is environment-aware, so you can
`spack install` an environment and then run `spack test run` to run smoke
tests on all of its packages. Historical test logs can be perused with
`spack test results`. Generic smoke tests for MPI implementations, C,
C++, and Fortran compilers as well as specific smoke tests for 18
packages.

Inside the test method, individual tests can be run separately (and
continue to run best-effort after a test failure) using the `run_test`
method. The `run_test` method encapsulates finding test executables,
running and checking return codes, checking output, and error handling.

This handles the following trickier aspects of testing with direct
support in Spack's package API:

- [x] Caching source or intermediate build files at build time for
      use at test time.
- [x] Test dependencies,
- [x] packages that require a compiler for testing (such as library only
      packages).

See the packaging guide for more details on using Spack testing support.
Included is support for package.py files for virtual packages. This does
not change the Spack interface, but is a major change in internals.

Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
Co-authored-by: wspear <wjspear@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-18 02:39:02 -08:00
sameershende
b81bbfb6e9
Added -level_zero -rocm -opencl flags and sha256 for TAU v2.30. (#19962)
* Added -level_zero -rocm -opencl flags and sha256 for TAU v2.30.

* Removed the depends_on clause for OpenCL and added a variant for OneAPI level_zero.

* remove depends_on rocm

* remove depends_on rocprofiler

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2020-11-17 19:09:24 -08:00
Massimiliano Culpo
7ffad278d3 concretizer: modified weights for providers and matching for externals
This commit address the case of concretizing a root spec with a
transitive conditional dependency on a virtual package, provided
by an external. Before these modifications default variant values
for the dependency bringing in the virtual package were not
respected, and the external package providing the virtual was added
to the DAG.

The issue stems from two facts:
- Selecting a provider has higher precedence than selecting default variants
- To ensure that an external is preferred, we used a negative weight

To solve it we shift all the providers weight so that:
- External providers have a weight of 0
- Non external provider have a weight of 10 or more

Using a weight of zero for external providers is such that having
an external provider, if present, or not having a provider at all
has the same effect on the higher priority minimization.

Also fixed a few minor bugs in concretize.lp, that were causing
spurious entries in the final answer set.

Cleaned concretize.lp from leftover rules.
2020-11-17 10:04:13 -08:00
Massimiliano Culpo
9a03fd2834 concretizer: don't require a provider for virtual deps if spec is external
This commit introduces a new rule:

real_node(Package) :- not external(Package), node(Package).

that permits to distinguish between an external node and a
real node that shouldn't trim dependency. It solves the
case of concretizing ninja with an external Python.
2020-11-17 10:04:13 -08:00
Massimiliano Culpo
e0ae60edc4 Added unit tests to for regressions on open concretizer bugs 2020-11-17 10:04:13 -08:00
Massimiliano Culpo
930b05fab4 Add unit tests for dependencies being patched by parent 2020-11-17 10:04:13 -08:00
Massimiliano Culpo
e7208b1598 tests: verify to handle dependencies conditional on other dependencies 2020-11-17 10:04:13 -08:00
Massimiliano Culpo
d00e8394f8 concretizer: handle conflicts with compiler ranges correctly
As reported, conflicts with compiler ranges were not treated
correctly. This commit adds tests to verify the expected behavior
for the new concretizer.

The new rules to enforce a correct behavior involve:
- Adding a rule to prefer the compiler selected for
  the root package, if no other preference is set
- Give a strong negative weight to compiler preferences
  expressed in packages.yaml
- Maximize on compiler AND compiler version match
2020-11-17 10:04:13 -08:00
Massimiliano Culpo
d4b83daa48 concretizer: added logic for preferred variants
If preferred variants are present, they'll
set the default value of a variant. Otherwise
the default value is what is encoded
in package.py
2020-11-17 10:04:13 -08:00
Themos Tsikas
72bc6cdf61
Build 7036 of Nag Fortran Compiler (#19954)
updated sha256sum of download .tgz
2020-11-17 11:14:22 -06:00
t-nojiri
7562e53a5a
clfft: Fix for aarch64 (#19873)
* clfft: Fix for aarch64

* clfft: Changed the patch application conditions.

* clfft: Changed Patch file
2020-11-17 09:59:14 -06:00
Keita Iwabuchi
8ba0ee7a0e
Metall package: add v0.7 (#19950)
* Metall: add version 0.2

* Add Metall v0.3

* Update Metall package to v0.4 and v0.5.

* Metall package: add v0.6

* Metall package: add v0.7
2020-11-17 09:58:36 -06:00
Tamara Dahlgren
6fa6af1070
Support parallel environment builds (#18131)
As of #13100, Spack installs the dependencies of a _single_ spec in parallel.
Environments, when installed, can only get parallelism from each individual
spec, as they're installed in order.  This PR makes entire environments build
in parallel by extending Spack's package installer to accept multiple root
specs.  The install command and Environment class have been updated to use
the new parallel install method.

The specs and kwargs for each *uninstalled* package (when not force-replacing
installations) of an environment are collected, passed to the `PackageInstaller`,
and processed using a single build queue.

This introduces a `BuildRequest` class to track install arguments, and it
significantly cleans up the code used to track package ids during installation.
Package ids in the build queue are now just DAG hashes as you would expect,

Other tasks:

- [x] Finish updating the unit tests based on `PackageInstaller`'s use of
      `BuildRequest` and the associated changes
- [x] Change `environment.py`'s `install_all` to use the `PackageInstaller` directly
- [x] Change the `install` command to leverage the new installation process for multiple specs
- [x] Change install output messages for external packages, e.g.:
       `[+] /usr` -> `[+] /usr (external bzip2-1.0.8-<dag-hash>`
- [x] Fix incomplete environment install's view setup/update and not confirming all 
       packages are installed (?)
- [x] Ensure externally installed package dependencies are properly accounted for in 
       remaining build tasks
- [x] Add tests for coverage (if insufficient and can identity the appropriate, uncovered non-comment lines)
- [x] Add documentation
- [x] Resolve multi-compiler environment install issues
- [x] Fix issue with environment installation reporting (restore CDash/JUnit reports)
2020-11-17 02:41:07 -08:00
vvolkl
ee5ae14a3b
[xerces-c] add netaccessor variant, new version (#19927)
* [xerces-c] add netaccessor variant, new version

* [geant4] add xerces-c netaccessor requirement

* [xerces-c] format
2020-11-16 16:12:53 -06:00
Wouter Deconinck
8752fc5872
[pythia6] needs CFLAGS/FFLAGS=-fcommon when %gcc@10: (#19947) 2020-11-16 16:12:20 -06:00
Jordan Ogas
385f5b8c53
node-js add gcc 4.8 conflict (#19945)
* add gcc 4.8 conflict

* commit suggestion

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-16 16:11:26 -06:00
eugeneswalker
81a7ae2c27
llvm: add variant: llvm_dylib (LLVM_BUILD_LLVM_DYLIB:Bool) (#19701) 2020-11-16 14:10:20 -08:00
Phil Tooley
42008e532f
WRF: Add version 3.9.1.1 and improve recipe robustness (#19882)
* Add WRF 3.9.1.1 and improve recipe robustness

* Include version 3.9.1.1 as common benchmarking workload
* Fix compilation against recent glibc (detect spack installed libtirpc)
* Detect and handle failed compilation (upstream use make -i)

* WRF: PR changes round 1
fix build jobs
fix maintainers
fix pkgconfig dependency
use Executable to run compile stage
repair some overzealous autoformatting by black

* WRF: make recipe py26 compatible

* wrf: recipe review changes round 2

* more python 26 fixes
2020-11-16 15:56:39 -06:00
Dr. Christian Tacke
8d50427c45
vgm: Switch all URLs to https (#19943) 2020-11-16 13:31:53 -06:00
Hadrien G
c512d0f408
[acts] Add versions 1.2.1 and 2.0.0 (#19936) 2020-11-16 13:28:55 -06:00
Ruben Di Battista
1fb8ae42e0
texlive: Fix install of @live version (#19941)
The unattended install using the pre-compiled binaries (tl-install)
needs a .profile file or it goes in interactive mode blocking the
install process forever
2020-11-16 13:26:31 -06:00
Satish Balay
6142ab56c7
Trilinos: update 13.0.1 (#19944) 2020-11-16 13:55:48 -05:00
Andreas Baumbach
a8fccdbddd
add new version py-wavelets@1.1.1 (#19930)
* add new version py-wavelets@1.1.1

* also update dependencies

* Update package.py
2020-11-16 10:41:17 -06:00
t-nojiri
793af74eb4
graphmap: Fix for aarch64 (#19935) 2020-11-16 10:41:00 -06:00
Matthieu Dorier
59d0c17654
Added new versions for the py-attrs package (#19938) 2020-11-16 10:39:49 -06:00
vvolkl
b6843e1a82
[dd4hep] switch to ninja generator to avoid running out of memory … (#19940)
* [dd4hep] switch to ninja generator to avoid running out of memory while compiling ddparsers

* [dd4hep] format
2020-11-16 10:38:50 -06:00
Dr. Christian Tacke
0aa55d426c
vmc: Add Version 1-0-p3 (#19942) 2020-11-16 10:36:32 -06:00
Andreas Baumbach
6aaa44c929
add new version py-tifffile@2020.10.1 (#19929)
* add new version py-tifffile@2020.10.1

* also update dependencies

* Update package.py
2020-11-16 10:08:40 -06:00
Tomoki, Karatsu
9c4733ab59
py-numpy: Add Fujitsu Fortran compiler to compiler type. (#19858)
* py-numpy: Add Fujitsu Fortran compiler to compiler type.

py-scipy: Specify Fujitsu to fcompiler types.

* Create patches applicable to each version.
2020-11-16 10:05:45 -06:00
Dr. Christian Tacke
5e904e37bb
singularity: added v3.6.4 (#19939) 2020-11-16 13:33:54 +01:00