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16119 Commits

Author SHA1 Message Date
Valentin Volkl
ae2fc50861 xqilla: add patches for newer xerces-c, gcc (#24021) 2021-05-31 03:49:23 -06:00
Michael Kuhn
c4e4d3587b libfabric: add debug variant (#24018) 2021-05-31 09:50:32 +02:00
Valentin Volkl
7bdd906580 vbfnlo: add missing build dependencies (#24022) 2021-05-30 19:26:39 +02:00
Paul R. C. Kent
d4585f4328 New versions: py-sphinxcontrib-bibtex, py-sphinx-rtd-theme, py-pybtex-docutils, py-pybtex (#24009) 
* New versions

* update deps

* py-sphinxcontrib-bibtex deps
 2021-05-29 20:52:36 -05:00
Paul R. C. Kent
120c718da5 New versions: py-gpaw, py-ase (#24008) 
* New gpaw and ase versions

* Update ase deps

* flask dep removed after 3.18.0
 2021-05-29 23:05:16 +00:00
Seth R. Johnson
9936182f60 qt: skip multimedia when ~opengl (#23989) 
* qt: skip multimedia when ~opengl

On 5.9 on macOS the multimedia option causes build errors; on other
platforms and versions it should probably be assumed inoperative anyway.

* qt: Omit flags when disabling multimedia

```
ERROR: Unknown command line option '-no-pulseaudio'.
```

* Work around another qt@5.9 error

* qt: Fix build error on darwin
 2021-05-29 20:53:25 +02:00
Desmond Orton
9b99f85abf New Package:py-ucsf-pyem (#23961) 
* New Package:py-ucsf-pyem

* Dep additions, eun env deletion

* extraction step change

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 13:28:14 -06:00
Ken Raffenetti
3c9c3c678d mpich: add v3.4.2 (#24002) 2021-05-28 12:34:29 -06:00
Desmond Orton
f8223303bb New Package: py-retry-decorator (#23967) 
* New Package: py-retry-decorator

* pypi link correction

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 18:06:36 +00:00
psakievich
4262de6a32 Add cxxstd to trilinos deps in nalu-wind (#23976) 
Co-authored-by: Philip Sakievich <psakiev@sanida.gov>
 2021-05-28 09:17:52 -07:00
Glenn Johnson
4171ee6650 armadillo: update and allow build with MKL (#23875) 2021-05-28 17:27:15 +02:00
Olivier Cessenat
0054e9bb08 argon2: ensure libraries are installed under lib (#21805) 
Make a standard installation for libs in lib not lib/x86_64-linux-gnu for cmake
 2021-05-28 17:26:15 +02:00
Desmond Orton
e0fa0145e3 freebayes: add v1.3.5, move to MesonPackage (#23772) 2021-05-28 17:07:52 +02:00
Manuela Kuhn
a9197d6e6d r-boot: add v1.3-28 (#23992) 2021-05-28 14:54:50 +00:00
Adam J. Stewart
2507929308 opencv: add v4.5.2 (#23913) 2021-05-28 16:50:25 +02:00
Seth R. Johnson
a975cad6c6 root: disable afterimage when ~x (#23962) 2021-05-28 10:48:06 -04:00
Manuela Kuhn
27c8aac3b6 r-matrix: add v1.3-3 (#23995) 2021-05-28 14:47:56 +00:00
archxlith
4365ed9205 openfst: add v1.8.1, add "python" variant (#23850) 2021-05-28 16:46:00 +02:00
Manuela Kuhn
fe302893ae r-lattice: add v0.20-44 (#23994) 2021-05-28 14:39:29 +00:00
Seth R. Johnson
d593aa5048 vecgeom: add v1.1.15 (#23973) 2021-05-28 16:36:32 +02:00
Desmond Orton
ebf6f71355 modeltest-ng: add new package (#23765) 2021-05-28 16:35:18 +02:00
Manuela Kuhn
16d4b1ed32 r-mass: add v7.3-54 (#23996) 2021-05-28 14:34:21 +00:00
Manuela Kuhn
f0eb4ca2d8 r-nlme: add v3.1-152 (#23997) 2021-05-28 14:30:37 +00:00
Manuela Kuhn
e06a3b7d45 r-lme4: add v1.1-27 (#23998) 2021-05-28 14:26:21 +00:00
Manuela Kuhn
c2e1e48fdc r-pbkrtest: add v0.5.1 (#23999) 2021-05-28 14:21:21 +00:00
Robert Mijakovic
50ea1f8577 singularity: add v3.7.4 (#23954) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-28 15:56:40 +02:00
Martin Aumüller
0c290ef1c3 embree: add v3.13.0, fix build (#23986) 
* embree: allow for compiling with gcc 7.3

strip out unsupported -mprefer-vector-width=256

* embree: fix build on AMD CPUs

The ISAs that embree is compiled for have to match the CPU
features enabled by the compiler, as embree derives theISA
that it compiles for from the latter.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-28 13:50:03 +02:00
Jose E. Roman
1dd6bc2725 SLEPc: add v3.15.1 (#23987) 2021-05-28 13:46:24 +02:00
Brian Van Essen
f1dc49bf42 lbann: add v0.102, add variant to enable address sanitizer. (#23981) 2021-05-28 11:31:24 +02:00
Martin Aumüller
6a9e2eeb83 botan: add v2.17.3, v2.18.0 and v2.18.1 (#23984) 2021-05-28 11:24:15 +02:00
Martin Aumüller
c4063b11fe ispc: add v1.15.0 (#23985) 2021-05-28 11:23:46 +02:00
plamborn
031ef00a1f libhio: added version 1.4.1.6 (#23975) 2021-05-28 00:19:12 -06:00
Ben Corbett
429b71bf57 Fix ZFP cuda build. (#23941) 2021-05-27 21:46:19 -06:00
Adam J. Stewart
850cac5ea3 py-cfgrib: add new version (#23916) 2021-05-28 03:14:44 +00:00
Adam J. Stewart
e2399bcd0e py-geocube: add new package (#23909) 2021-05-27 19:40:54 -05:00
Desmond Orton
b375500134 py-gql: Added version and deps for @0.4.0 (#23927) 
* Added version and deps for @0.4.0

* Switched to pypi, fixed deps

* deprecation removal
 2021-05-28 00:13:27 +00:00
Desmond Orton
b255c698d5 New Package: py-google-apitools (#23968) 
* New Package: py-google-apitools

* proper python constraints

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-28 00:03:15 +00:00
Desmond Orton
53e4f32a31 New package:py-coveralls (#23930) 
* New package:py-coveralls

* dep fixes

* added python constraint

* pyyaml version constraint

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-05-27 17:40:13 -06:00
Desmond Orton
e74d10fd78 py-healpy: added missing dep (#23960) 
* py-healpy: added missing dep

* added healpix and pkgconfig
 2021-05-27 23:33:03 +00:00
romerojosh
f31bc986a8 Update nvshmem package to use public URL (#23933) 2021-05-27 23:25:12 +02:00
Adam J. Stewart
ef56462867 Add fuse virtual dependency, new macfuse package (#23904) 2021-05-27 23:21:11 +02:00
Adam J. Stewart
214182529f wget: add new version, fix macOS build (#23921) 2021-05-27 13:23:17 -07:00
Michael Kuhn
dd0bd179c5 gtkplus: add 3.24.29 (#23896) 
This also fixes the build with %gcc@11:. According to upstream, the
proper solution is to disable -Werror=array-bounds since the stable
branch will not receive a patch for newer compilers.
 2021-05-27 15:17:13 -05:00
Adam J. Stewart
f92b7eca5e py-eccodes: add new package (#23906) 2021-05-27 13:16:44 -07:00
Adam J. Stewart
cc4029daab py-datacube: add new package (#23905) 
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2021-05-27 13:14:59 -07:00
Adam J. Stewart
4e8d87e5cc plumed: add missing m4 dependency (#23957) 2021-05-27 14:45:31 -04:00
Sebastian Schmitt
30547f60d1 Update py-pint and fix runtime dependency on setuptools (#23950) 
* Update py-pint and fix runtime dependency on setuptools

Without the runtime dependency on setuptools, importing pint yields:

0.11:

ModuleNotFoundError: No module named 'pkg_resources'

0.17:

ModuleNotFoundError: No module named 'packaging'

* Fix

* Address comments
 2021-05-27 17:44:26 +00:00
Desmond Orton
84ad5e444a New package: py-promise (#23936) 
* New package: py-promise

* removed test deps, added missing dep
 2021-05-27 17:18:46 +00:00
Tamara Dahlgren
cf15c42c1e py-hatchet: update v1.3.0 checksum (#23902) 2021-05-27 09:40:34 -07:00
Adam J. Stewart
d990c93cab py-rasterio: add v1.2.3 (#23945) 2021-05-27 10:28:20 -06:00