Commit Graph

28911 Commits

Author SHA1 Message Date
Sreenivasa Murthy Kolam
29d344e4c7 update version for rocm-4.3.1 release (#25766) 2021-09-03 15:25:31 +02:00
bernhardkaindl
95586335f7 openssh: add v8.7 (#25774) 2021-09-03 06:22:40 -06:00
Weiqun Zhang
f56f4677cf amrex: 21.09 (#25739) 2021-09-03 03:34:56 -06:00
Desmond Orton
043f0cd014 py-ansi2html: new package (#25741) 2021-09-03 11:25:52 +02:00
Desmond Orton
9841d1f571 py-cryolobm: add new package (#25748) 2021-09-03 11:25:06 +02:00
Desmond Orton
d61439c26a py-lineenhancer: add new package (#25743) 2021-09-03 10:59:06 +02:00
Desmond Orton
0b9baf9ae3 py-terminaltables: add new package (#25738) 2021-09-03 10:58:18 +02:00
Axel Huebl
2331148f4b WarpX: 21.09 (#25771)
Add the latest WarpX release.
2021-09-03 10:53:29 +02:00
Stephen Hudson
ffec74c359 libensemble: add tasmanian as optional dependency (#25762) 2021-09-03 10:30:08 +02:00
Desmond Orton
f162dd4f5b py-gooey: new package (#25763) 2021-09-03 10:24:31 +02:00
Desmond Orton
8149048a78 py-colorclass: add new package (#25747) 2021-09-03 10:17:33 +02:00
Desmond Orton
2b7a2f66b7 py-mrcfile: add new package (#25742) 2021-09-03 10:16:38 +02:00
Desmond Orton
551766e3c6 py-pathtools: add new package (#25749) 2021-09-03 09:23:01 +02:00
Olivier Cessenat
35fe188d22 silo: add build dependency on m4 (#25770) 2021-09-03 08:54:31 +02:00
jacorvar
5f4fcea79c Correct typo in r-assertive-data-uk (#25754)
`r-assertive-base` version contains a dot instead of a hyphen.
2021-09-02 18:10:56 -05:00
Tamara Dahlgren
487edcc416 mfem: Update stand-alone test to use test stage directory (#25744) 2021-09-02 14:52:56 -07:00
Gianluca Ficarelli
f71d93fc55 py-submitit: add new package (#25699) 2021-09-02 07:58:02 -05:00
Gilles Gouaillardet
2d78045cdd gromacs: add v2021.3 (#25750) 2021-09-02 12:18:05 +02:00
Vanessasaurus
8e61f54260 start of work to add spack audit packages-https checker (#25670)
This PR will add a new audit, specifically for spack package homepage urls (and eventually
other kinds I suspect) to see if there is an http address that can be changed to https.

Usage is as follows:

```bash
$ spack audit packages-https <package>
```
And in list view:

```bash
$ spack audit list
generic:
  Generic checks relying on global variables

configs:
  Sanity checks on compilers.yaml
  Sanity checks on packages.yaml

packages:
  Sanity checks on specs used in directives

packages-https:
  Sanity checks on https checks of package urls, etc.
```

I think it would be unwise to include with packages, because when run for all, since we do requests it takes a long time. I also like the idea of more well scoped checks - likely there will be other addresses for http/https within a package that we eventually check. For now, there are two error cases - one is when an https url is tried but there is some SSL error (or other error that means we cannot update to https):

```bash
$ spack audit packages-https zoltan
PKG-HTTPS-DIRECTIVES: 1 issue found
1. Error with attempting https for "zoltan": 
    <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: Hostname mismatch, certificate is not valid for 'www.cs.sandia.gov'. (_ssl.c:1125)>
```
This is either not fixable, or could be fixed with a change to the url or (better) contacting the site owners to ask about some certificate or similar.

The second case is when there is an http that needs to be https, which is a huge issue now, but hopefully not after this spack PR.

```bash
$ spack audit packages-https xman
Package "xman" uses http but has a valid https endpoint.
```

And then when a package is fixed:

```bash
$ spack audit packages-https zlib
PKG-HTTPS-DIRECTIVES: 0 issues found.
```
And that's mostly it. :)

Signed-off-by: vsoch <vsoch@users.noreply.github.com>

Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-09-02 08:46:27 +02:00
Cody Balos
8a7af82a82 py-adios: add new version (#25746) 2021-09-01 23:19:45 -07:00
Harmen Stoppels
0c61b31922 Bump nlohman-json and fix cmake args (#25504)
* Bump nlohman-json and fix cmake args

* Rename variant
2021-09-01 18:28:11 -07:00
David Beckingsale
156edffec2 Update versions for RAJA, CHAI, Umpire and camp (#25528) 2021-09-01 17:58:47 -07:00
eugeneswalker
6d484a055a py-jupyterhub: add version: 1.4.1 (#24890)
* py-jupyterhub: add version: 1.4.1

* dont need mako for latest release

* sort dependencies

* notebook isnt used for 1.4.1+

* add dependency on py-jupyter-telemetry; create new package py-jupyter-telemetry

* py-jupyter-telemetry: declare missing dependencies

* py-jupyterhub: need more specific depends_on before less specific

* add py-json-logger; py-jupyter-telemetry: add depends_on for py-json-logger

* Update var/spack/repos/builtin/packages/py-jupyter-telemetry/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* remove py-json-logger erroneously and duplicatively added

* Update var/spack/repos/builtin/packages/py-jupyterhub/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* need py-alembic@1.4: for newest py-jupyterhub

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-01 22:58:24 +00:00
Harmen Stoppels
03331de0f2 bugfix: R packages can be concretized together with clingo again (#25730) 2021-09-01 14:12:55 -07:00
David Beckingsale
aabece46ba Add variant to allow unsupported compiler & CUDA combinations (#19736)
Sometimes users need to be able to override the conflicts in `CudaPacakge`.  This introduces a variant to enable/disable them.
2021-09-01 11:34:20 -07:00
Harmen Stoppels
4c23059017 Speed-up two unit tests by using builtin.mock instead of builtin (#25544) 2021-09-01 11:58:29 +02:00
Nisarg Patel
ab37ac95bf Adding new versions of redis (#25714) 2021-09-01 11:39:39 +02:00
Harmen Stoppels
2411a9599e nghttp2: add v1.44.0, fix build (#25605) 2021-09-01 11:33:31 +02:00
Peter Scheibel
b0ee7deaa7 allow building silo+mpi ^hdf5~mpi (#25724) 2021-09-01 09:43:57 +02:00
Richarda Butler
7adacf967d Legion: Add E4S testsuite stand alone test (#25285)
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2021-08-31 16:57:55 -07:00
Richarda Butler
2633cf7da6 Papyrus: Add E4S testsuite stand alone test (#25324) 2021-08-31 15:56:20 -07:00
Hadrien G
3c6050d3a2 acts: add v12.0.0, v12.0.1 (#25697) 2021-08-31 16:44:01 +02:00
Scott Wittenburg
b34f289796 Pipelines: disable power builds (#25704) 2021-08-30 17:19:42 -07:00
Jen Herting
beb3524392 [py-plotly] added version 5.2.2 (#25668)
* [py-plotly] added version 5.2.2

* [py-plotly] flake8

* [py-plotly] requests not required for new version
2021-08-30 16:15:49 -05:00
Adam J. Stewart
8ee5bf6d03 py-pythran: update checksum for patch (#25693)
* Replace URL patch with file patch
* Add comment explaining patch origin and purpose
2021-08-30 10:02:39 -07:00
psakievich
a018f48df9 Updates to Exawind packages (#25568) 2021-08-30 09:22:55 -06:00
lorddavidiii
e51463f587 asciidoc-py3: add v9.1.0, v9.0.5 and v9.0.4 (#25562) 2021-08-30 08:32:03 -06:00
Piotr Luszczek
378543b554 plasma: add version 21.8.29, migrate url (#25688) 2021-08-30 07:46:46 -06:00
Valentin Volkl
3cd224afbf gaudi: update py-xenv dependency (#25457) 2021-08-30 07:13:41 -06:00
Mikael Simberg
44c0089be4 Add patch to fix Boost with CCE and CUDA (#25534) 2021-08-30 05:19:54 -06:00
Bryan Herman
65584a3b92 universal-ctags: add version p5.9.20210829.0 (#25361) 2021-08-30 11:51:47 +02:00
Phil Carns
ab657d7b53 mochi-margo: add v0.9.5 (#25365) 2021-08-30 11:42:36 +02:00
Ryan Marcellino
d3d0ee7328 miniconda3: add v4.10.3 (#25442)
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30 11:39:27 +02:00
Ryan Marcellino
ed17c3638b anaconda3: add v2021.05 (#25443)
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30 11:38:23 +02:00
Valentin Volkl
2f777d08a2 rivet: fixes for gcc@10: (#25454) 2021-08-30 11:37:39 +02:00
kwryankrattiger
9be81ac4d9 Add documentation on compiler environment (#25508) 2021-08-30 11:17:03 +02:00
lorddavidiii
e60e41d9ca ocl-icd: add v2.3.1 (#25561) 2021-08-30 11:11:16 +02:00
dependabot[bot]
a2293e6ee1 build(deps): bump codecov/codecov-action from 2.0.2 to 2.0.3 (#25594)
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 2.0.2 to 2.0.3.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/master/CHANGELOG.md)
- [Commits](https://github.com/codecov/codecov-action/compare/v2.0.2...v2.0.3)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-08-30 10:58:12 +02:00
Mikael Simberg
d381ab77b2 boost: add v1.77.0 (#25536) 2021-08-30 10:19:49 +02:00
Adam J. Stewart
1bf051e229 py-pbr: fix import tests (#25679) 2021-08-30 09:11:44 +02:00