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17806 Commits

Author SHA1 Message Date
iarspider
50b1b654c9 evtgen: fix mac build and version 2.0.0 with pythia >= 8.304. (#25933) 2021-10-04 14:06:49 +02:00
Manuela Kuhn
e9accaaca1 py-duecredit: add v0.6.5 (#26465) 2021-10-04 14:01:12 +02:00
Manuela Kuhn
68648b3ff5 py-nibabel: add v2.4.1 (#26462) 2021-10-04 14:00:49 +02:00
Valentin Volkl
e4d5bcf916 podio: remove build_type variant (provided by base package class already) (#26463) 2021-10-04 14:00:20 +02:00
Bernhard Kaindl
3fff338844 freebayes: Fix running the testsuite and add pkgconfig (#26440) 
freebayes needs the tools of the vcflib it includes to run tests
 2021-10-04 14:00:08 +02:00
Nikolay Simakov
225927c1c3 graph500: added option -fcommon for gcc@10.2 (#25367) 
* graph500: added option -fcommon for gcc@10.2:, otherwise failed to build with "multiple definition of `column'"

* graph500: moved setting cflag to flag_handler
 2021-10-04 13:42:33 +02:00
iarspider
bf9cf87d9b libunwind: add variants (#26099) 2021-10-04 13:04:39 +02:00
Manuela Kuhn
f1839c6aae py-pybids: add v0.9.5 (#26461) 2021-10-04 10:35:06 +00:00
Harmen Stoppels
d84d7f0599 Disable tests on hip for cmake 3.21 (#26460) 2021-10-04 10:20:07 +00:00
Manuela Kuhn
e2ee3066cf py-mne: add new package (#26446) 2021-10-04 09:56:58 +00:00
Manuela Kuhn
1f451924b1 py-sphinxcontrib-napoleon: add new package (#26457) 2021-10-04 09:52:56 +00:00
Manuela Kuhn
8bcbead42b py-templateflow: add new package (#26458) 2021-10-04 09:47:37 +00:00
Seth R. Johnson
205b414162 hdf5: allow implicit functions on apple-clang (#26409) 
Work around issues in older hdf5 build and overzealous build flags:
```
 >> 1420    /var/folders/j4/fznvdyhx4875h6fhkqjn2kdr4jvyqd/T/9te/spack-stage/spack-stage-hdf5-1.10.4-feyl6tz6hpx5kl7m33avpuacwje2ubul/spack-src/src/H5Odeprec.c:141:8: error: implicit decl
             aration of function 'H5CX_set_apl' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
```
 2021-10-04 10:19:56 +02:00
Seth R. Johnson
5d431087ab python: correctly disable ~tkinter when @3.8 (#26365) 
The older patch does not apply so the build ends up failing:
```
     1539    In file included from /private/var/folders/fy/x2xtwh1n7fn0_0q2kk29xkv9vvmbqb/T/s3j/spack-stage/spack-stage-python-3.8.11
             -6jyb6sxztfs6fw26xdbc3ktmbtut3ypr/spack-src/Modules/_tkinter.c:48:
  >> 1540    /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/tk.h:86:11: f
             atal error: 'X11/Xlib.h' file not found
     1541    #       include <X11/Xlib.h>
     1542                    ^~~~~~~~~~~~
     1543    1 error generated.
```
 2021-10-04 10:18:23 +02:00
iarspider
7104b8599e Update byacc (#25837) 
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
 2021-10-04 09:55:20 +02:00
G-Ragghianti
7009724f0d papi: new variants rocm and rocm_smi (#26214) 2021-10-04 09:53:17 +02:00
Manuela Kuhn
81abbb41bc git-annex: add 8.20210804 for amd64 (#26449) 2021-10-04 09:50:05 +02:00
Manuela Kuhn
d0da7c8440 py-pockets: add new package (#26452) 2021-10-04 09:43:10 +02:00
Garth N. Wells
baa50c6679 FEniCSx: fix CMake root directory and dependency versions (#26445) 2021-10-04 09:20:53 +02:00
Manuela Kuhn
44d7218038 py-seaborn: add v0.11.2 (#26447) 2021-10-04 09:17:38 +02:00
Manuela Kuhn
9e0aabdef3 py-transforms3d: add new package (#26448) 2021-10-04 09:17:04 +02:00
Joseph Wang
91598912f7 ocaml: add v4.13.1 (#26453) 
This is needed in order to make it work with glibc-2.34
 2021-10-04 08:47:30 +02:00
Daniel Arndt
862bcc5059 ArborX: Explicitly set path to Kokkos (#26347) 
* Explicitly set path to Kokkos for ArborX testing

* Improve formatting

* Update var/spack/repos/builtin/packages/arborx/package.py

Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>

* Remove blank line

Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
 2021-10-03 23:04:52 -04:00
Hector
2f6590ddd1 source-highlight: add gcc11 patch (#26412) 2021-10-03 16:07:39 +00:00
Lorién López Villellas
c0b383b3e1 PICSAR: added support for GCC >10.0 and arm compiler (#24927) 
* -fallow-argument-mismatch flag added when compiling with GCC to avoid a compilation error when using a GCC version > 10.0.

Co-authored-by: Haz99 <jsalamerosanz@gmail.com>

* Filtered every occurrence of "!$OMP SIMD SAFELEN(LVEC2)" when compiling with nvhcp to avoid a compilation error.

Co-authored-by: Haz99 <jsalamerosanz@gmail.com>

* Line with more than 80 characters split into multiple lines.

Co-authored-by: Haz99 <jsalamerosanz@gmail.com>
 2021-10-03 10:11:04 -04:00
Harmen Stoppels
b9e72557e8 Remove .99 from version ranges (#26422) 
In most cases, .99 can be omitted thanks to #26402 .
 2021-10-03 09:09:02 -04:00
Tim Moon
2de116d285 DiHydrogen: Specify required NVSHMEM variants (#26384) 2021-10-03 08:30:27 -04:00
Bernhard Kaindl
f6ce95bfcb chombo: several build fixes: csh, space regex and install (#26424) 
See description of the the PR for details on the changes.
 2021-10-03 14:28:28 +02:00
Harmen Stoppels
e53bd0eba8 bison: new versions 3.8:3.8.2 (#26439) 2021-10-03 07:57:03 -04:00
Takahiro Ueda
d603f4519d form: use version tarballs, fix and enable gmp and zlib variants (#26425) 
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
Co-authored-by: iarspider <iarspider@gmail.com>
 2021-10-03 08:45:33 +00:00
Michael Kuhn
d4b3724557 meson: add 0.59.2 (#26430) 2021-10-03 10:41:08 +02:00
Michael Kuhn
abce326ea3 openblas: add 0.3.18 (#26429) 2021-10-03 10:38:48 +02:00
Manuela Kuhn
4c1285b1c2 py-svgutils: new package (#26437) 2021-10-03 02:38:36 +02:00
Marc Fehling
34a1e4d8b6 p4est: bump/update to 2.8 (#26081) 2021-10-03 01:56:03 +02:00
Manuela Kuhn
ee568cb6a4 py-packaging: bump version to 21.0 (#26436) 2021-10-02 23:31:24 +00:00
Manuela Kuhn
0db072dc4a py-attrs: bump version to 21.2.0 (#26435) 2021-10-02 23:23:02 +00:00
Manuela Kuhn
6a188b2b13 py-nitransforms: new package (#26434) 2021-10-03 01:06:13 +02:00
Wouter Deconinck
846428a661 podio: add supported CMAKE_BUILD_TYPE values (#26432) 2021-10-03 00:38:36 +02:00
Manuela Kuhn
aee1d44edf py-pybids: bump version to 0.13.2 (#26433) 2021-10-03 00:36:02 +02:00
Sreenivasa Murthy Kolam
f1c83b00d4 atmi: replace /usr/bin/rsync with depends_on rsync (#26353) 2021-10-03 00:32:46 +02:00
Manuela Kuhn
8dcd568769 py-ipyvtk-simple: new package (#26431) 2021-10-02 23:18:08 +02:00
Josh Bowden
aaf35fd520 damaris: bump version to 1.5.0, add variant examples (#26220) 2021-10-02 23:06:17 +02:00
Manuela Kuhn
bc6edc7baf py-ipycanvas: new package (#26426) 2021-10-02 22:30:09 +02:00
Olivier Cessenat
2ce3be3a27 fltk: new version 1.3.7, new variant xft (#26423) 2021-10-02 16:27:38 -04:00
Manuela Kuhn
b65360f721 py-ipyevents: add new package (#26427) 2021-10-02 22:23:09 +02:00
Robert Romero
57803887e8 cddlib: use github URLs and bump version (#26315) 
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
 2021-10-02 19:50:32 +00:00
Weiqun Zhang
43e08af7b2 amrex: bump version to 21.10 (#26416) 2021-10-02 18:25:50 +02:00
Massimiliano Culpo
0e469fc01e clingo-bootstrap: add a variant for static libstdc++ (#26421) 2021-10-02 14:53:24 +02:00
Mihael Hategan
b3d3ce1c37 py-pytest-random-order: new package - plugin for py-pytest. (#26413) 2021-10-02 12:38:09 +02:00
Rob Falgout
d9f25f223f Add hypre release 2.23.0 (#26418) 2021-10-02 09:52:50 +02:00