William Downs
35a51760a8
esmf: Add versions 8.0.0 and 8.0.1 ( #21147 )
2021-01-19 10:52:47 -06:00
Harmen Stoppels
034debeba5
Always set cmake args because defaults change across versions ( #21146 )
2021-01-19 09:57:12 -06:00
ketsubouchi
8a6e7c8687
cpmd: new package ( #21138 )
2021-01-19 09:02:09 -06:00
Tomoyasu Nojiri
ab83b6689e
sortmerna: Fix for aarch64 ( #21126 )
2021-01-19 09:01:16 -06:00
yellowhat
89b9d07efa
gromacs: add v2020.5 ( #21144 )
2021-01-19 10:26:35 +01:00
Robert Brunner
91f65b9772
libyogrt: add lsf scheduler support, create yogrt.conf file ( #19960 )
...
Tell the libyogrt installer to create a yogrt.conf file, specifying whatever
scheduler was specified in the scheduler=XXX parameter.
2021-01-19 10:01:48 +01:00
Adam J. Stewart
86e9d93859
libidn2:use http for download ( #21001 )
...
This is needed since libidn is used to bootstrap curl
2021-01-19 09:54:25 +01:00
Pramod Kumbhar
908528f2f1
NEURON: add v7.8.2, move to CMake and remove all old versions ( #20582 )
...
* Update NEURON simulator package
- update recipe to support autoconf as well as cmake
- new versions >=7.8 support cmake
- remove old variants
- added patch for latest bug fix release 7.8.2
Co-authored-by: Kumbhar Pramod Shivaji <kumbhar@bbpv1.epfl.ch>
Co-authored-by: Kumbhar Pramod Shivaji <kumbhar@bb-c02vf1h0hv2r.epfl.ch>
2021-01-19 09:42:50 +01:00
Thomas Madlener
a92bb5400e
lcio, sio: add sio dependency, update versions and expose zlib version for sio ( #20839 )
2021-01-19 09:20:43 +01:00
Glenn Johnson
82b10583f9
r-grbase: added v1.8-6.7 ( #21033 )
2021-01-19 09:10:21 +01:00
Tomoki, Karatsu
5033250140
specfem3d-globe: add new package ( #20830 )
2021-01-19 08:55:18 +01:00
h-denpo
f781fd1878
universal-ctags: added link dependency on libiconv ( #21141 )
2021-01-19 08:47:26 +01:00
darmac
a567b73108
py-numexpr: added v2.7.2 ( #21142 )
2021-01-19 08:42:16 +01:00
yellowhat
83eec2d170
NAMD: FIX build +cuda and mpi ~smp ( #20778 )
...
* NAMD: FIX build +cuda
Hi,
If I try to compile NAMD with CUDA support, it fails because cannot file the file "{self.arch}.cuda" because it is undet the "arch" folder.
* NAMD: FIX mpi ~smp
Fix `spack install namd ^charmpp backend=mpi ~smp`
2021-01-18 23:12:06 -06:00
Rao Garimella
a36c40b61d
Update versions of Wonton and Tangram packages ( #20813 )
2021-01-18 23:06:26 -06:00
Michael Kuron
2e299c5008
siesta: fix build with gfortran ( #20840 )
...
Avoid Error: Line truncated at (1) [-Werror=line-truncation]
2021-01-18 22:59:53 -06:00
Erik Schnetter
a2d8023e2a
ssht: New version 1.3.4 ( #20880 )
...
* ssht: New version 1.3.4
ssht changed configuration mechanism from "home-grown" to "cmake. The previously current version 1.2b1 (a beta release) is thus unfortunately not available any more.
* ssht: Don't set build type
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-18 22:57:53 -06:00
Vicente Bolea
94f1e838b2
ParaView: add new ParaView-5.9.0-RC4 release ( #21132 )
...
* ParaView: add new ParaView-5.9.0-RC4 release
Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
* ParaView: add official maintainer @vicentebolea
Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
2021-01-18 22:53:17 -06:00
Toyohisa Kameyama
3143222d87
salmon-tddft: add eigenexa variant ( #21140 )
2021-01-18 22:52:50 -06:00
Thomas Madlener
d1174bd40f
Make sure sio library is properly propagated ( #20940 )
2021-01-18 22:52:27 -06:00
darmac
fe32d256d2
ceres-solver: add v2.0.0 ( #21005 )
2021-01-18 22:51:57 -06:00
Harmen Stoppels
1dab789504
Don't use CUDA for hipblas ( #20935 )
...
* Don't use CUDA for hipblas
* old versions use TRY_CUDA
* Update var/spack/repos/builtin/packages/hipblas/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-18 22:49:59 -06:00
Glenn Johnson
85838e98fb
add version 2.2-2 to r-gwmodel ( #21121 )
...
* add version 2.2-2 to r-gwmodel
* Update var/spack/repos/builtin/packages/r-gwmodel/package.py
Fix comma, space issue.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-18 16:59:05 -06:00
Glenn Johnson
c7d3651356
add version 0.3.17 to r-inline ( #21053 )
...
* add version 0.3.17 to r-inline
* Drop R version constraint
A really old version of R was specified in the 0.3.14 and 0.3.15
versions of r-inline. This constraint was dropped in the 0.3.17 version.
Drop it from the spack recipe as well.
2021-01-18 16:58:08 -06:00
Michael Kuron
cec784bb10
vasp: fix build with gfortran 10 and add version 6.1.1 ( #20900 )
...
* vasp: fix build with gfortran 10
Avoid Error: Type mismatch between actual argument at (1) and actual argument at (2)
* vasp: add version 6.1.1
* vasp 6: allow building without CUDA
2021-01-18 16:54:52 -06:00
kuramoto-fj
bd51f81e20
Mapsplice2: Add new package ( #20901 )
2021-01-18 16:53:50 -06:00
Thomas Madlener
e960721c65
Use shared=True to find libraries, since this is the default ( #20907 )
...
package also does not expose a shared variant
2021-01-18 16:51:44 -06:00
Atsushi Hori
777901843f
New Package: Process-in-Process (PiP) -- 2nd trial ( #20925 )
...
* Adding PiP recipe
* pip@1 recipe (it seems working)
* change install dir hierarchy
* installing PiP man pages
* add pip-glibc & pip-gdb
* fix configure option designations, fix dependency types
* fix dependency type of pip
* use AutotoolsPackage in pip recipe
* add patch for pip-glibc & pip-gdb to enable 'disable-werror'
* change glibc install directory
* add linux distro check to pip-gdb
* create process-in-process package
* use flag_handler and join_path
* add gcc version constraint, change install-test to check-installed
* fix gcc version designations on conflicts()
* add constraint of target cpu, fix flake8 warnings
* add version constraint to resource()
* Some fixes to adapt the current version
not to execute 'piplnlibs'
change documentation install command
* Update
new branch name of PiP-gdb
adapting PiP-Testsuite
* update pip-gdb github urls
* The very first commit of Process-in-Process (PiP)
details can be found at https://github.com/RIKEN-SysSoft/PiP
* Fix comment style issues
* New Package: Process-in-Process (PiP) -- 2nd trial
* fix style issue
* change inline comments style (required to have two spaces)
Co-authored-by: Daiki Matsunaga <daikim@axe.bz>
2021-01-18 16:50:48 -06:00
Tomoyasu Nojiri
b7badf2447
gengetopt: Add texinfo depend ( #20929 )
2021-01-18 16:40:34 -06:00
bryanherman
c500ea80c3
Add SVN extension to Git ( #20939 )
...
* added package for svn extension to perl
* added svn variant to git recipe
2021-01-18 16:39:56 -06:00
takanori-ihara
a5963d686c
eigenexa: new package. ( #20934 )
2021-01-18 23:37:09 +01:00
G-Ragghianti
335c5ed5cb
Updated with requirements for openblas dependency ( #20956 )
...
* Updated with requirements for openblas dependency
* Python style fixes
2021-01-18 16:34:21 -06:00
Simon Frasch
e91ff86882
spfft: add version 1.0.0 ( #20959 )
2021-01-18 16:33:18 -06:00
Glenn Johnson
699df81a95
add version 1.2-9 to r-aer ( #20965 )
2021-01-18 12:57:28 -06:00
Glenn Johnson
5fb647d17c
The latest version of imagemagick needs libtool linking ( #20969 )
...
Imagemagick-7.0.8 needs to link against libltdl. Otherwise, the build will fail with:
```
2 errors found in build log:
503 checking for libltdl...
504 checking ltdl.h usability... no
505 checking ltdl.h presence... no
506 checking for ltdl.h... no
507 checking for lt_dlinit in -lltdl... no
508 checking if libltdl package is complete... no
>> 509 configure: error: in `/tmp/gpjohnsn/spack-stage/spack-stage-imagemagick-7.0.8-7-4y44gaklhhciiwjzhfpxjfwdj5q
ltjp3/spack-src':
>> 510 configure: error: libltdl is required for modules and OpenCL builds
511 See `config.log' for more details
```
2021-01-18 12:57:15 -06:00
Glenn Johnson
8f5651e63e
add version 3.3.3 to r-ggplot2 ( #21021 )
2021-01-18 12:56:36 -06:00
Glenn Johnson
e879c4176d
add version 0.6-2 to r-gmp ( #21028 )
2021-01-18 12:56:21 -06:00
Glenn Johnson
bd404d8ff8
add version 0.5-1 to r-gridgraphics ( #21034 )
2021-01-18 12:56:06 -06:00
Glenn Johnson
7f7f9a7bfb
add version 3.8.2 to r-gtools ( #21038 )
...
* add version 3.8.2 to r-gtools
* Improve formatting of description
In case the list gets formatted as a non-list:
- added semicolons to end of list items
- replaced dashes with [#]
2021-01-18 12:55:51 -06:00
Glenn Johnson
415cff5061
add version 1.30 to r-knitr ( #21061 )
...
* add version 1.30 to r-knitr
* Fix version constraints
- r-digest
- r-formatr
The version constraints on those packages should actually be in the `when`
clause.
2021-01-18 12:55:33 -06:00
Glenn Johnson
91fcd49484
add version 1.0-6 to r-libcoin ( #21075 )
2021-01-18 12:55:18 -06:00
Glenn Johnson
978f74eac7
add version 1.2.0 to r-gh ( #21112 )
2021-01-18 12:55:04 -06:00
Glenn Johnson
2c3550ae18
add version 1.1.2 to r-tidyr ( #21113 )
2021-01-18 12:54:51 -06:00
Glenn Johnson
b424dbfead
new package: r-rcppdate ( #21114 )
...
'date' is a C++ header library offering extensive date and time
functionality for the C++11, C++14 and C++17 standards written by Howard
Hinnant and released under the MIT license. A slightly modified version
has been accepted (along with 'tz.h') as part of C++20. This package
regroups all header files from the upstream repository by Howard Hinnant
so that other R packages can use them in their C++ code. At present, few
of the types have explicit 'Rcpp' wrapper though these may be added as
needed.
2021-01-18 12:54:35 -06:00
Glenn Johnson
563d939804
add version 2.0.2 to r-mnormt ( #21115 )
2021-01-18 12:54:22 -06:00
Glenn Johnson
e132195d6c
add version 3.12.0 to r-mice ( #21116 )
2021-01-18 12:54:06 -06:00
Glenn Johnson
ca9e103994
new package: r-mutoss ( #21117 )
...
Designed to ease the application and comparison of multiple hypothesis
testing procedures for FWER, gFWER, FDR and FDX. Methods are
standardized and usable by the accompanying 'mutossGUI'.
2021-01-18 12:53:53 -06:00
Glenn Johnson
5a42df5944
add version 2.0.4.1 to r-leaflet ( #21118 )
2021-01-18 12:53:38 -06:00
Glenn Johnson
a693a56459
add version 2.1.0 to r-janitor ( #21120 )
2021-01-18 12:53:23 -06:00
Glenn Johnson
42748f389f
new package: r-parallelly ( #21122 )
...
Utility functions that enhance the 'parallel' package and support the
built-in parallel backends of the 'future' package. For example,
availableCores() gives the number of CPU cores available to your R
process as given by the operating system, 'cgroups' and Linux
containers, R options, and environment variables, including those set by
job schedulers on high-performance compute clusters. If none is set, it
will fall back to parallel::detectCores(). Another example is
makeClusterPSOCK(), which is backward compatible with
parallel::makePSOCKcluster() while doing a better job in setting up
remote cluster workers without the need for configuring the firewall to
do port-forwarding to your local computer.
2021-01-18 12:53:09 -06:00
Glenn Johnson
b9c5a73a48
add version 2.0.0 to r-dbplyr ( #21123 )
2021-01-18 12:52:55 -06:00
vvolkl
93740d5600
[genfit] add tags and first version ( #21127 )
2021-01-18 12:49:58 -06:00
Hadrien G
d996fc080a
[acts] Add version 4.1, bump minimal dependencies ( #21128 )
2021-01-18 12:49:19 -06:00
Michael Kuron
98788aa4bd
py-mdanalysis: correctly depend on py-gsd ( #21133 )
2021-01-18 12:45:50 -06:00
Sergey Kosukhin
723f132531
python: improve building with Intel ( #21134 )
2021-01-18 12:44:22 -06:00
dithwick
fa53838d2f
ibm-java: new version ( #21135 )
2021-01-18 12:43:18 -06:00
darmac
3b064b3a96
py-pycairo: update version and fix setup.py test error ( #21004 )
...
* py-pycairo: update version and fix setup.py test error
* py-pycairo: update dependency
2021-01-18 12:34:41 -06:00
Tomoyasu Nojiri
385ca1529a
hssp: Fix checksum for 3.0.10 ( #20894 )
...
* hssp: Fix checksum for 3.0.10
* hssp: Fix checksum for 3.0.1 to 3.0.9
2021-01-18 12:21:49 -06:00
Toyohisa Kameyama
3ee8c11910
mpas-model: New package. ( #21124 )
...
* mpas-model: New package.
* remove pnetcdf variant.
remove debug print.
* remove unnessesary line.
* style fix.
2021-01-18 12:10:21 -06:00
bryanherman
2cfe349828
added new python package py-f90wrap ( #20957 )
2021-01-17 22:38:16 -06:00
darmac
5b75dde872
Libconfuse: refine autoreconf and add some dependencies ( #21006 )
...
* libconfuse: add some build dependencies
* libconfuse: use autogen.sh to do the autoreconf
2021-01-17 22:30:42 -06:00
Robert Underwood
16ee9dc110
sz: version 2.1.11.1 ( #21008 )
2021-01-17 22:28:51 -06:00
Glenn Johnson
aeb6c63ea6
add version 0.4.2 to r-labeling ( #21063 )
2021-01-17 14:09:08 -06:00
Glenn Johnson
733c6767f5
add version 1.2.4 to r-lambda-r ( #21064 )
2021-01-17 14:08:54 -06:00
Glenn Johnson
840e072bbe
add version 16.1.4 to r-laplacesdemon ( #21065 )
2021-01-17 14:08:39 -06:00
Glenn Johnson
6793f3fd55
add version 1.1.0.1 to r-later ( #21066 )
2021-01-17 14:08:24 -06:00
Glenn Johnson
9feb2572fb
add version 0.20-41 to r-lattice ( #21067 )
2021-01-17 14:08:08 -06:00
Glenn Johnson
36a547aff4
add version 0.6-29 to r-latticeextra ( #21068 )
2021-01-17 14:07:54 -06:00
Glenn Johnson
41ca013069
add version 1.6.8.1 to r-lava ( #21069 )
2021-01-17 14:07:40 -06:00
Glenn Johnson
a54e4322e5
add version 1.0-4 to r-ldheatmap ( #21070 )
2021-01-17 14:07:27 -06:00
Glenn Johnson
e316cde706
new package: r-leaflet-providers ( #21071 )
...
Contains third-party map tile provider information from 'Leaflet.js',
<https://github.com/leaflet-extras/leaflet-providers >, to be used with
the 'leaflet' R package. Additionally, 'leaflet.providers' enables users
to retrieve up-to-date provider information between package updates.
2021-01-17 14:07:15 -06:00
Glenn Johnson
716a094c08
add version 3.1 to r-leaps ( #21072 )
2021-01-17 14:07:00 -06:00
Glenn Johnson
a1d894e30a
add version 0.3.6 to r-leiden ( #21073 )
2021-01-17 14:06:46 -06:00
Glenn Johnson
e98d5bd143
add version 4.0.5 to r-bit64 ( #20964 )
2021-01-17 14:05:05 -06:00
Glenn Johnson
76878dbbee
add version 0.8-81 to r-foreign ( #20975 )
...
* add version 0.8-81 to r-foreign
* fix line length too long error
2021-01-17 14:01:48 -06:00
Glenn Johnson
1a8c0eedb9
add version 3.3.2 to r-geomorph ( #21010 )
2021-01-17 14:00:43 -06:00
Glenn Johnson
5acf07b4c8
add version 3.11.0 to r-ergm ( #21011 )
2021-01-17 13:59:46 -06:00
Glenn Johnson
f714dfc226
add version 1.3-0 to r-lsei ( #21083 )
2021-01-17 13:58:08 -06:00
Glenn Johnson
1d1d4a5796
new package: r-cpp11 ( #21015 )
...
Provides a header only, C++11 interface to R's C interface. Compared to
other approaches 'cpp11' strives to be safe against long jumps from the
C API as well as C++ exceptions, conform to normal R function semantics
and supports interaction with 'ALTREP' vectors.
2021-01-17 13:57:53 -06:00
Glenn Johnson
8a2ee437a2
add version 1.0.3 to r-dplyr ( #21012 )
2021-01-17 13:57:12 -06:00
Glenn Johnson
afb17db324
add version 2.2.0 to r-remotes ( #21016 )
2021-01-17 13:55:46 -06:00
Glenn Johnson
ef128e50e1
add version 1.2.0 to r-pkgbuild ( #21017 )
2021-01-17 13:55:04 -06:00
Glenn Johnson
2a342b7541
add version 1.1.0 to r-pkgload ( #21018 )
2021-01-17 13:54:15 -06:00
Glenn Johnson
0d0d52050b
add version 2.0.2 to r-rversions ( #21019 )
2021-01-17 13:53:31 -06:00
Glenn Johnson
0efce74027
add version 7.1.1 to r-roxygen2 ( #21020 )
2021-01-17 13:52:31 -06:00
Glenn Johnson
54bab50b47
new package: r-gitcreds ( #21022 )
...
Query, set, delete credentials from the 'git' credential store. Manage
'GitHub' tokens and other 'git' credentials. This package is to be used
by other packages that need to authenticate to 'GitHub' and/or other
'git' repositories.
2021-01-17 13:49:36 -06:00
Glenn Johnson
9295019928
add version 0.9.0 to r-gistr ( #21023 )
2021-01-17 13:48:55 -06:00
Glenn Johnson
ce14d627a6
add version 0.28.0 to r-git2r ( #21024 )
2021-01-17 13:48:07 -06:00
Glenn Johnson
c8e52aaa9c
add version 4.1 to r-glmnet ( #21025 )
2021-01-17 13:47:11 -06:00
Glenn Johnson
c204b94927
add version 0.14.0 to r-globals ( #21026 )
2021-01-17 13:46:31 -06:00
Glenn Johnson
56fd340231
add version 1.4.2 to r-glue ( #21027 )
2021-01-17 13:45:54 -06:00
Glenn Johnson
cf4feccefc
add version 0.6.9 to r-googlevis ( #21029 )
2021-01-17 13:44:30 -06:00
Glenn Johnson
8c7e4b9d22
add version 0.2.2 to r-gower ( #21030 )
2021-01-17 13:43:53 -06:00
Glenn Johnson
84674ec696
add version 3.1.1 to r-gplots ( #21031 )
2021-01-17 13:43:16 -06:00
Glenn Johnson
eb250ec23d
add version 0.7.1 to r-graphlayouts ( #21032 )
2021-01-17 13:42:31 -06:00
Glenn Johnson
6a7611c4c2
add version 2.1.2 to r-gsodr ( #21035 )
2021-01-17 13:39:56 -06:00
Glenn Johnson
d9b1a8bf45
add version 2.2-2 to r-gss ( #21036 )
2021-01-17 13:39:06 -06:00
Glenn Johnson
251f16358b
add version 2.0-6 to r-gstat ( #21037 )
2021-01-17 13:38:28 -06:00
Glenn Johnson
879a662278
add version 1.4-5 to r-sp ( #21039 )
2021-01-17 13:36:13 -06:00
Glenn Johnson
c2cc650943
add version 2.3.1 to r-haven ( #21040 )
2021-01-17 13:35:35 -06:00
Glenn Johnson
055be03518
add version 1.3.3 to r-hdf5r ( #21041 )
2021-01-17 13:34:38 -06:00
Glenn Johnson
9df65902e7
add version 1.28.2 to r-hexbin ( #21042 )
2021-01-17 13:33:35 -06:00
Glenn Johnson
fb1776ceca
add version 3.1-43 to r-hh ( #21043 )
2021-01-17 13:32:56 -06:00
Glenn Johnson
974c0dcc62
add version 4.4-2 to r-hmisc ( #21044 )
2021-01-17 13:32:02 -06:00
Glenn Johnson
26933550f7
add version 1.0.0 to r-hms ( #21045 )
2021-01-17 13:30:50 -06:00
Glenn Johnson
e4f9c5d213
add version 2.1.0 to r-htmltable ( #21046 )
2021-01-17 13:30:01 -06:00
Glenn Johnson
44c58ad727
add version 0.5.1 to r-htmltools ( #21047 )
2021-01-17 13:29:14 -06:00
Glenn Johnson
f0ae5cf235
add version 1.5.3 to r-htmlwidgets ( #21048 )
2021-01-17 13:28:26 -06:00
Glenn Johnson
6864bfc6f0
add version 0.3.0 to r-httpcode ( #21049 )
2021-01-17 13:27:40 -06:00
Glenn Johnson
311068354a
add version 1.5.5 to r-httpuv ( #21050 )
2021-01-17 13:27:02 -06:00
Glenn Johnson
8e514a04d0
add version 1.2.6 to r-igraph ( #21051 )
2021-01-17 13:26:03 -06:00
Glenn Johnson
63662be724
add version 0.42.3 to r-imager ( #21052 )
2021-01-17 13:24:48 -06:00
Glenn Johnson
0a64b616ca
add version 0.15.2 to r-intervals ( #21054 )
2021-01-17 13:22:43 -06:00
Glenn Johnson
061fa01dcb
add version 0.4.0 to r-isdparser ( #21055 )
2021-01-17 13:22:03 -06:00
Glenn Johnson
665f297067
add version 0.0-18.1 to r-iso ( #21056 )
2021-01-17 13:21:15 -06:00
Glenn Johnson
1b997bde77
add version 1.0.13 to r-iterators ( #21057 )
2021-01-17 13:20:36 -06:00
Glenn Johnson
a118404fbf
add version 2.7-2 to r-jomo ( #21058 )
2021-01-17 11:55:45 -06:00
Glenn Johnson
9b90640f9a
add version 0.9-29 to r-kernlab ( #21059 )
2021-01-17 11:54:57 -06:00
Glenn Johnson
d84b401d38
add version 2.23-18 to r-kernsmooth ( #21060 )
2021-01-17 11:54:17 -06:00
Glenn Johnson
a64eaacc0d
add version 1.11.7 to r-ks ( #21062 )
2021-01-17 11:49:58 -06:00
Glenn Johnson
d4dadcfa10
add version 1.1.1 to r-lhs ( #21074 )
2021-01-17 11:39:42 -06:00
Glenn Johnson
1af0aeee7b
add version 0.8.0 to r-listenv ( #21076 )
2021-01-17 11:38:14 -06:00
Glenn Johnson
7e3120a9c5
add version 1.1-26 to r-lme4 ( #21077 )
2021-01-17 11:37:32 -06:00
Glenn Johnson
16166223e8
add version 0.9-38 to r-lmtest ( #21078 )
2021-01-17 11:35:59 -06:00
Glenn Johnson
6f27d20a58
add version 1.5-9.4 to r-locfit ( #21079 )
2021-01-17 11:35:23 -06:00
Glenn Johnson
92a665e07d
add version 0.3.2 to r-log4r ( #21080 )
2021-01-17 11:34:42 -06:00
Glenn Johnson
e19464979f
add version 2.4.1 to r-loo ( #21081 )
2021-01-17 11:33:55 -06:00
Glenn Johnson
6606eb6a96
add version 5.6.15 to r-lpsolve ( #21082 )
2021-01-17 11:32:33 -06:00
Glenn Johnson
efd1536e36
add version 1.7.9.2 to r-lubridate ( #21084 )
2021-01-17 11:30:50 -06:00
Glenn Johnson
b0bf2c4c99
add version 2.0.1 to r-magrittr ( #21085 )
2021-01-17 11:30:04 -06:00
Glenn Johnson
68845f6b23
add version 0.10.1 to r-manipulatewidget ( #21086 )
2021-01-17 11:29:22 -06:00
Glenn Johnson
9dee70eea5
add version 1.2.7 to r-mapproj ( #21087 )
2021-01-17 11:28:30 -06:00
Glenn Johnson
a9574b0180
add version 1.0-2 to r-maptools ( #21088 )
2021-01-17 11:27:44 -06:00
Glenn Johnson
c3a1900fe9
add version 7.3-53 to r-mass ( #21089 )
2021-01-17 11:26:52 -06:00
Glenn Johnson
1b281948e4
add version 1.3-2 to r-matrix ( #21090 )
2021-01-17 11:26:14 -06:00
Glenn Johnson
8abe261359
add version 0.57.0 to r-matrixstats ( #21091 )
2021-01-17 11:25:09 -06:00
Glenn Johnson
b8296aedf3
add version 5.4.7 to r-mclust ( #21092 )
2021-01-17 11:24:20 -06:00
Glenn Johnson
7a109269f5
add version 2.30 to r-mcmcglmm ( #21093 )
2021-01-17 11:23:41 -06:00
Glenn Johnson
27f3bcecee
add version 1.15.6 to r-mco ( #21094 )
2021-01-17 11:22:54 -06:00
Glenn Johnson
158c6da440
add version 0.5-2 to r-mda ( #21095 )
2021-01-17 11:22:15 -06:00
Glenn Johnson
505dc3c0cf
new package: r-mathjaxr ( #21096 )
...
Provides 'MathJax' and macros to enable its use within Rd files for
rendering equations in the HTML help files.
2021-01-17 11:21:33 -06:00
Glenn Johnson
ef9a0ed08d
add version 1.8-33 to r-mgcv ( #21097 )
2021-01-17 11:20:38 -06:00
Glenn Johnson
679f6b3dfc
add version 0.9 to r-mime ( #21098 )
2021-01-17 11:19:52 -06:00
Glenn Johnson
ed87d83bce
add version 0.9-0 to r-misc3d ( #21099 )
2021-01-17 11:19:11 -06:00
Glenn Johnson
53984edf2e
add version 1.2.0 to r-mixtools ( #21100 )
2021-01-17 11:18:22 -06:00
Glenn Johnson
6f3c53e12e
add version 2.18.0 to r-mlr ( #21101 )
2021-01-17 11:17:29 -06:00
Glenn Johnson
010daebf50
add version 1.1.5 to r-mlrmbo ( #21102 )
2021-01-17 11:15:45 -06:00
Glenn Johnson
2d8b8c395e
add version 0.1.3 to r-mmwrweek ( #21103 )
2021-01-17 11:14:30 -06:00
Glenn Johnson
8ebf242e8f
new package: r-tmvnsim ( #21104 )
...
Importance sampling from the truncated multivariate normal using the GHK
(Geweke-Hajivassiliou-Keane) simulator. Unlike Gibbs sampling which can
get stuck in one truncation sub-region depending on initial values, this
package allows truncation based on disjoint regions that are created by
truncation of absolute values. The GHK algorithm uses simple Cholesky
transformation followed by recursive simulation of univariate truncated
normals hence there are also no convergence issues. Importance sample is
returned along with sampling weights, based on which, one can calculate
integrals over truncated regions for multivariate normals.
2021-01-17 11:13:47 -06:00
Glenn Johnson
ee0221d973
add version 0.1.8 to r-modelr ( #21105 )
2021-01-17 11:12:57 -06:00
Glenn Johnson
eefdadfe7e
add version 0.2-23 to r-modeltools ( #21106 )
2021-01-17 11:11:18 -06:00
Glenn Johnson
40700930ea
add version 1.4-15 to r-multcomp ( #21107 )
2021-01-17 11:10:34 -06:00
Glenn Johnson
3213dbf27f
add version 0.1-10 to r-multicool ( #21108 )
2021-01-17 11:09:22 -06:00
Glenn Johnson
b756df13d7
add version 1.0-15 to r-multitaper ( #21109 )
2021-01-17 11:08:38 -06:00
Glenn Johnson
50a361f75e
add version 1.1-1 to r-mvtnorm ( #21110 )
2021-01-17 11:07:54 -06:00
Glenn Johnson
15afce3f8b
add version 0.2.9 to r-rcppcctz ( #21111 )
2021-01-17 11:06:59 -06:00
Adam J. Stewart
fc7e48daf0
util-linux-uuid: don't install to system directories ( #21000 )
2021-01-16 22:01:05 +01:00
Glenn Johnson
255df2455c
r-cubature: added v2.0.4.1 ( #20871 )
2021-01-16 17:44:47 +01:00
Glenn Johnson
3193817b27
r-data-table: add v1.13.6 ( #20872 )
2021-01-16 17:31:07 +01:00
Glenn Johnson
74144d44d8
R geor ( #20990 )
2021-01-16 15:27:59 +01:00
Glenn Johnson
9c4c558e2a
add version 2.0.3.2 to r-gdalutils ( #20985 )
2021-01-16 15:27:47 +01:00
Glenn Johnson
a539cfc857
add version 2.1.8 to r-gbm ( #20983 )
2021-01-16 15:27:37 +01:00
Glenn Johnson
ebce4325e8
add version 5.1-7 to r-gamlss-dist ( #20982 )
2021-01-16 15:27:26 +01:00
Glenn Johnson
72218aeebb
add version 5.2-0 to r-gamlss ( #20981 )
2021-01-16 15:27:12 +01:00
Glenn Johnson
e56d4826b7
add version 1.5.0 to r-fs ( #20980 )
2021-01-16 15:27:02 +01:00
Glenn Johnson
85d6620ce0
add version 1.5-1 to r-fracdiff ( #20979 )
2021-01-16 15:26:47 +01:00
Glenn Johnson
bf91917f99
add version 2.2-9 to r-fpc ( #20978 )
2021-01-16 15:26:38 +01:00
Glenn Johnson
5e9aac9c1f
add version 1.2-4 to r-formula ( #20977 )
2021-01-16 15:26:27 +01:00
Glenn Johnson
7f2742ecd4
add version 8.13 to r-forecast ( #20974 )
2021-01-16 15:25:54 +01:00
Glenn Johnson
35232bc38c
add version 1.5.1 to r-foreach ( #20973 )
2021-01-16 15:25:44 +01:00
Glenn Johnson
38199ce9cf
add version 0.5.0 to r-forcats ( #20972 )
2021-01-16 15:25:30 +01:00
Glenn Johnson
e65551a158
add version 1.7.2 to r-jsonlite ( #20971 )
2021-01-16 15:25:17 +01:00
Glenn Johnson
89009c10af
new package: r-proc ( #20970 )
2021-01-16 15:25:07 +01:00
Glenn Johnson
2eed811a1f
add version 1.1.0 to r-tidyselect ( #20968 )
2021-01-16 15:24:07 +01:00
Glenn Johnson
fae1c812e4
add version 1.7-16 to r-ade4 ( #20967 )
2021-01-16 15:23:47 +01:00
Glenn Johnson
c0ad6ab46c
add version 2.1.3 to r-adegenet ( #20966 )
2021-01-16 15:23:35 +01:00
Glenn Johnson
700d7f3f6c
add version 0.21 to r-bookdown ( #20963 )
2021-01-16 15:22:31 +01:00
Glenn Johnson
6f7b939e07
add version 0.1.3.1 to r-c50 ( #20962 )
2021-01-16 15:22:17 +01:00
Glenn Johnson
db37d0ab12
add version 3.5.1 to r-callr ( #20961 )
2021-01-16 15:22:05 +01:00
Glenn Johnson
d291612c59
add version 0.9.2 to r-cdcfluview ( #20960 )
2021-01-16 15:21:53 +01:00
Glenn Johnson
d2e0a2448f
add version 1.0.4 to r-construct ( #20954 )
2021-01-16 15:21:18 +01:00
Glenn Johnson
ad034af7dc
add version 0.4.12 to r-circlize ( #20958 )
2021-01-16 15:20:26 +01:00
Glenn Johnson
184fb792f5
fix list_url for r packages ( #20955 )
2021-01-16 15:20:09 +01:00
Glenn Johnson
9bb4503be1
add version 1.1.1 to r-cowplot ( #20953 )
2021-01-16 15:18:55 +01:00
Glenn Johnson
98bebba0d8
add version 1.14.0 to r-dendextend ( #20952 )
2021-01-16 15:18:34 +01:00
Glenn Johnson
c00c145f4e
add version 1.0.6.1 to r-diagrammer ( #20950 )
2021-01-16 15:18:21 +01:00
Glenn Johnson
6683921988
add version 1.8.2 to r-dorng ( #20949 )
2021-01-16 15:18:05 +01:00
Glenn Johnson
4d8eb48a40
add version 5.3.0 to r-earth ( #20948 )
2021-01-16 15:17:47 +01:00
Glenn Johnson
6a9d0b53a6
add version 0.4 to r-europepmc ( #20947 )
2021-01-16 15:17:26 +01:00
Glenn Johnson
8108501aca
add version 0.5.1 to r-exactextractr ( #20946 )
2021-01-16 15:17:08 +01:00
Glenn Johnson
0dbdfa20ae
add version 1.0.7 to r-factoextra ( #20945 )
2021-01-16 15:16:49 +01:00
Glenn Johnson
7c5ea8d3b4
add version 2.4 to r-factominer ( #20943 )
2021-01-16 15:16:35 +01:00
Glenn Johnson
47a4727ac5
add version 4.0.4 to r-ff ( #20942 )
2021-01-16 15:15:30 +01:00
Glenn Johnson
d9ef32ceff
add version 4.4.1 to r-statnet-common ( #20941 )
2021-01-16 15:15:13 +01:00
Glenn Johnson
41cc3404a4
add version 0.9-7 to r-sf ( #20851 )
2021-01-16 15:13:54 +01:00
Alberto Chiusole
bf660bff04
Update IOR to 3.3.0 + set as preferred ( #20986 )
2021-01-16 15:13:15 +01:00
Glenn Johnson
d3f78eacdf
add version 0.1.0 to r-generics ( #20987 )
2021-01-16 15:12:21 +01:00
Glenn Johnson
ba024fdb7d
add version 1.0.5 to r-getoptlong ( #20988 )
2021-01-16 15:12:08 +01:00
Glenn Johnson
fa33c534f7
add version 0.1-8.1 to r-jpeg ( #20989 )
2021-01-16 15:11:53 +01:00
Glenn Johnson
5abf70d48d
add version 0.1.22 to r-ggdendro ( #20991 )
2021-01-16 15:11:28 +01:00
Glenn Johnson
74418d1aed
add version 0.3.2 to r-ggforce ( #20992 )
2021-01-16 15:11:13 +01:00
Glenn Johnson
d409004f70
new package: r-isoband ( #20993 )
2021-01-16 15:10:57 +01:00
Glenn Johnson
6acfca4635
add version 0.0.5 to r-ggplotify ( #20994 )
2021-01-16 15:10:37 +01:00
Glenn Johnson
9bb72ea946
add version 0.9.0 to r-ggrepel ( #20995 )
2021-01-16 15:10:21 +01:00
Glenn Johnson
e87b1b7aa4
add version 0.5.3 to r-ggridges ( #20996 )
2021-01-16 15:10:08 +01:00
Glenn Johnson
a98e48525d
add version 0.4.7 to r-ggvis ( #20997 )
2021-01-16 15:09:46 +01:00
Cyrus Harrison
710fe02a9a
update dray package with new versions and to fix issue with test variant ( #19583 )
...
* update dray package with new versions and to fix issue with test variant
* fix comment typo
* flake8 remove trailing white space on last line
2021-01-15 17:14:06 -06:00
QuellynSnead
330c48b244
zoltan: source code location change ( #20787 )
2021-01-15 10:59:38 +01:00
Glenn Johnson
ad0c0e81fd
r-pixmap: added new package ( #20795 )
2021-01-15 10:51:35 +01:00
Glenn Johnson
59cf4c9039
add version 0.8-18 to r-amap ( #20803 )
2021-01-15 10:50:33 +01:00
Glenn Johnson
9756167049
add version 5.4-1 to r-ape ( #20804 )
2021-01-15 10:50:08 +01:00
Glenn Johnson
ee7ce1f44f
add version 2.0.3 to r-argparse ( #20805 )
2021-01-15 10:49:40 +01:00
Glenn Johnson
1798ae9b39
add version 1.2.1 to r-backports ( #20806 )
2021-01-15 10:47:38 +01:00
Glenn Johnson
8599480ed9
add version 3.1-4 to r-bayesm ( #20807 )
2021-01-15 10:47:14 +01:00
Glenn Johnson
13d0618f03
add version 0.4.2.3 to r-bibtex ( #20815 )
2021-01-15 10:46:49 +01:00
Glenn Johnson
8f7b50b01f
add version 2.4-1 to r-bio3d ( #20816 )
2021-01-15 10:46:17 +01:00
Glenn Johnson
3d3761f8f0
add version 4.0.4 to r-bit ( #20818 )
2021-01-15 10:45:52 +01:00
Glenn Johnson
0024c8df08
add version 1.2.1 to r-blob ( #20819 )
2021-01-15 10:45:26 +01:00
Glenn Johnson
d2c3fb5e45
add version 2.6 to r-rmarkdown ( #20838 )
2021-01-15 10:44:54 +01:00
Glenn Johnson
46c71d070f
add version 0.2.3 to r-cubist ( #20841 )
2021-01-15 10:44:27 +01:00
Glenn Johnson
df29b9f55e
add version 1.5-12.2 to r-cairo ( #20842 )
2021-01-15 10:43:21 +01:00
Glenn Johnson
699a1e7c86
add version 3.4.5 to r-processx ( #20843 )
2021-01-15 10:42:57 +01:00
Glenn Johnson
bbc733b84c
add version 3.0-10 to r-car ( #20844 )
2021-01-15 10:42:28 +01:00
Glenn Johnson
84f5f8437f
r-lifecycle: new package at v0.2.0 ( #20845 )
2021-01-15 10:42:06 +01:00
Glenn Johnson
0d27aa685d
add version 1.0.1 to r-caracas ( #20846 )
2021-01-15 10:41:26 +01:00
Glenn Johnson
0fe9fa6a75
add version 3.0-4 to r-cardata ( #20847 )
2021-01-15 10:40:46 +01:00
Glenn Johnson
c270629d23
add version 1.2.2.2 to r-modelmetrics ( #20849 )
2021-01-15 10:40:28 +01:00
Glenn Johnson
319a3c93f8
add version 1.18.1 to r-catools ( #20850 )
2021-01-15 10:39:37 +01:00
Glenn Johnson
ec307c83a6
add version 2.0.0 to r-checkmate ( #20852 )
2021-01-15 10:38:27 +01:00
Glenn Johnson
3ad021eef5
add version 0.4.10 to r-checkpoint ( #20853 )
2021-01-15 10:38:04 +01:00
Glenn Johnson
33325609be
add version 2.3-56 to r-chron ( #20854 )
2021-01-15 10:37:35 +01:00
Glenn Johnson
aea0740cdc
add version 0.1.2 to r-globaloptions ( #20855 )
2021-01-15 10:35:18 +01:00
Glenn Johnson
5cfb19fb34
add version 0.4-3 to r-classint ( #20857 )
2021-01-15 10:34:55 +01:00
Glenn Johnson
89b745ed3f
add version 2.2.0 to r-cli ( #20858 )
2021-01-15 10:34:33 +01:00
Glenn Johnson
d2f99bb42b
add version 0.7.1 to r-clipr ( #20859 )
2021-01-15 10:34:09 +01:00
Glenn Johnson
5eec0e418c
add version 0.3-58 to r-clue ( #20860 )
2021-01-15 10:33:48 +01:00
Glenn Johnson
532ca134f3
add version 1.3.7 to r-clustergeneration ( #20861 )
2021-01-15 10:30:48 +01:00
Glenn Johnson
c654ce7557
add version 0.19-4 to r-coda ( #20862 )
2021-01-15 10:20:44 +01:00
Glenn Johnson
d2f7e6d020
add version 1.3-1 to r-coin ( #20863 )
2021-01-15 10:16:32 +01:00
Glenn Johnson
e0f75b6fc3
add version 2.0-0 to r-colorspace ( #20864 )
2021-01-15 10:15:55 +01:00
mic84
7762b8acdd
amrex: add ROCm support ( #20809 )
2021-01-15 01:14:55 -08:00
Glenn Johnson
3b9144a4a4
add version 0.3.6 to r-vctrs ( #20878 )
2021-01-15 10:07:58 +01:00
Glenn Johnson
c8e4ded260
add version 0.4.10 to r-rlang ( #20796 )
2021-01-15 10:07:26 +01:00
Glenn Johnson
bf6b8cfe6e
add version 2.0-1 to r-compositions ( #20865 )
2021-01-15 10:06:45 +01:00
Glenn Johnson
1b78ca678a
add version 5.0.2 to r-rcppparallel ( #20866 )
2021-01-15 10:06:23 +01:00
Glenn Johnson
1973a01c9c
add version 1.0-1 to r-copula ( #20867 )
2021-01-15 10:06:04 +01:00
Glenn Johnson
faa1f84d57
add version 1.1.0.1 to r-crosstalk ( #20869 )
2021-01-15 10:05:37 +01:00
Glenn Johnson
a7316a24ca
add version 1.0.0 to r-crul ( #20870 )
2021-01-15 10:05:17 +01:00
Glenn Johnson
e596e6ba3a
add version 0.2-3 to r-deldir ( #20873 )
2021-01-15 10:02:47 +01:00
Glenn Johnson
878d071974
add version 2.2-5 to r-deoptim ( #20874 )
2021-01-15 10:02:16 +01:00
Glenn Johnson
5a29444ac4
add version 1.28 to r-desolve ( #20875 )
2021-01-15 10:01:56 +01:00
Glenn Johnson
0c617d81cb
add version 1.4.2 to r-httr ( #20876 )
2021-01-15 10:01:34 +01:00
Glenn Johnson
b7d992dd03
add version 1.5.8 to r-dicekriging ( #20877 )
2021-01-15 10:01:03 +01:00
Glenn Johnson
1e9eae7c1c
add version 1.5 to r-rngtools ( #20887 )
2021-01-15 09:59:52 +01:00
Glenn Johnson
9a2155f7b1
add version 0.6.27 to r-digest ( #20882 )
2021-01-15 09:55:55 +01:00
Glenn Johnson
53c9b0232b
add version 1.3-3 to r-dismo ( #20883 )
2021-01-15 09:55:28 +01:00
Glenn Johnson
d1c815ddb9
add version 0.9-15 to r-diversitree ( #20884 )
2021-01-15 09:55:06 +01:00
Glenn Johnson
7b80796882
add version 1.3.7 to r-domc ( #20885 )
2021-01-15 09:54:49 +01:00
Glenn Johnson
8697cf826d
add version 1.0.16 to r-doparallel ( #20886 )
2021-01-15 09:54:26 +01:00
Glenn Johnson
e1fd840ccc
r-dosnow: add v1.0.19 ( #20888 )
2021-01-15 09:53:29 +01:00
Glenn Johnson
52d2d24a4a
r-dt: add v0.17 ( #20889 )
2021-01-15 09:52:28 +01:00
Glenn Johnson
1df3d65127
r-dtw: add v1.22-3 ( #20890 )
2021-01-15 09:51:58 +01:00
a-saitoh-fj
de085efd7d
libzmq: add platform conditions to libbsd dependency ( #20893 )
2021-01-15 09:50:49 +01:00
darmac
1998630ca2
libvips: added v8.10.5 ( #20902 )
2021-01-15 09:48:56 +01:00
Adam J. Stewart
92b6d3ac67
py-anuga: add new package ( #20782 )
2021-01-15 09:47:18 +01:00
Abhinav Bhatele
2c44e62813
hatchet: updated urls ( #20908 )
2021-01-15 09:23:54 +01:00
Thomas Green
58d5b73ba4
Improve gcc detection in llvm. ( #20189 )
...
Co-authored-by: Tom Scogland <tom.scogland@gmail.com>
Co-authored-by: Thomas Green <ca-tgreen@gw4a64fxlogin00.head.gw4.metoffice.gov.uk>
2021-01-15 09:22:58 +01:00
Glenn Johnson
56904d5834
r-plotmo: add v3.6.0 ( #20909 )
2021-01-15 09:16:59 +01:00
Glenn Johnson
1dc48dc92a
r-ecp: add v3.1.3 ( #20910 )
2021-01-15 09:16:35 +01:00
Adam J. Stewart
ac2b9a3e24
py-fiscalyear: add v0.3.0 ( #20911 )
2021-01-15 09:16:08 +01:00
Glenn Johnson
3233debf1b
r-ellipse: add v0.4.2 ( #20912 )
2021-01-15 09:15:33 +01:00
Glenn Johnson
a438828ec9
r-energy: add v1.7-7 ( #20914 )
2021-01-15 09:14:56 +01:00
Glenn Johnson
fca652ab65
r-envstats: add v2.4.0 ( #20915 )
2021-01-15 09:14:02 +01:00
Glenn Johnson
05906ab57e
r-expint: add v0.1-6 ( #20917 )
2021-01-15 09:13:30 +01:00
Tomoyasu Nojiri
ed4dea2dc2
cln: add build dependency on texinfo ( #20928 )
2021-01-15 09:07:18 +01:00
Glenn Johnson
e160f649b8
r-expm: add v0.999-6 ( #20918 )
2021-01-15 09:03:58 +01:00
Glenn Johnson
4bab89bbff
r-farver: add v2.0.3 ( #20919 )
2021-01-15 09:03:20 +01:00
Glenn Johnson
7fe5430d0c
r-fftwtools: add v0.9-9 ( #20920 )
2021-01-15 09:02:49 +01:00
Glenn Johnson
3e93175b65
r-fields: add v11.6 ( #20921 )
2021-01-15 09:02:13 +01:00
Glenn Johnson
266132c06d
r-fit-models: add v0.64 ( #20922 )
2021-01-15 09:01:14 +01:00
Glenn Johnson
71615632de
r-fitdistrplus: add v1.1-3 ( #20923 )
2021-01-15 09:00:27 +01:00
Glenn Johnson
0f40d8b59f
r-flexmix: add v2.3-17 ( #20924 )
2021-01-15 08:59:49 +01:00
Tomoyasu Nojiri
863bdd5115
libconfig: add build dependency on texinfo ( #20930 )
2021-01-15 08:45:14 +01:00
Glenn Johnson
a23404c7a7
r-ellipsis: added v0.3.1 ( #20913 )
2021-01-15 08:40:41 +01:00
Glenn Johnson
7cb4a8afe0
r-rle: new package ( #20916 )
...
Common 'base' and 'stats' methods for 'rle' objects, aiming to make it
possible to treat them transparently as vectors.
2021-01-15 08:39:44 +01:00
Adam J. Stewart
1e22b5a00b
PCL: add new package ( #20933 )
2021-01-15 08:38:56 +01:00
h-denpo
ef764deb54
pocl: added v1.6 ( #20932 )
...
Made version 1.5 or lower conflicts with a64fx.
2021-01-15 08:29:27 +01:00
Tomoyasu Nojiri
03f6717c38
fujitsu-fftw: Add new package ( #20824 )
2021-01-14 19:34:12 +01:00
Henrique Mendonça
7dde96b795
py-hovorod: fix typo on variant name in conflicts directive ( #20906 )
2021-01-14 19:27:41 +01:00
Kelly (KT) Thompson
040f69f931
py-h5py: HDF5_DIR is needed for ~mpi too ( #20905 )
...
For the `~mpi` variant, the environment variable `HDF5_DIR` is still required. I moved this command out of the `+mpi` conditional.
2021-01-14 13:27:04 -05:00
Glenn Johnson
89fd0faa40
r-class: added v7.3-17 ( #20856 )
2021-01-14 19:24:05 +01:00
Glenn Johnson
5d62b369de
r-covr: added v3.5.1 ( #20868 )
2021-01-14 19:23:25 +01:00
Glenn Johnson
1a99c2ee46
r-diffusionmap: added v1.2.0 ( #20881 )
2021-01-14 19:22:40 +01:00
Glenn Johnson
49bdbfe08b
r-e1071: added v1.7-4 ( #20891 )
2021-01-14 19:21:40 +01:00
Shintaro Iwasaki
94cb97e849
llvm-doe: added new package ( #20719 )
...
The package contains duplicated code from llvm/package.py,
will supersede solve.
2021-01-14 19:20:04 +01:00
Tomoyasu Nojiri
d0891d5d26
astyle: Fix makefile for install parameter ( #20899 )
2021-01-14 11:56:24 -06:00
darmac
b423db6ddb
r-sf: fix dependency error ( #20898 )
2021-01-14 09:20:59 -06:00
Chuck Atkins
08e5baccef
ecp-data-vis-sdk: Combine the vis and io SDK packages ( #20737 )
...
This better enables the collective set to be deployed togethor satisfying
eachothers dependencies
2021-01-14 08:24:27 -05:00
mic84
f6dd85b2b0
amrex: fix handling of CUDA arch ( #20786 )
...
* amrex: fix handling of CUDA arch
* amrex: fix style
* amrex: fix bug
* Update var/spack/repos/builtin/packages/amrex/package.py
* Update var/spack/repos/builtin/packages/amrex/package.py
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-01-13 18:53:57 -08:00
Chuck Atkins
4f49b1a930
adios2: Define custom libs property ( #20848 )
2021-01-13 17:42:36 -05:00
Chuck Atkins
fc4e66ef3c
adios2: Add 2.7.0 release ( #20800 )
...
This release also includes the HDF5 VOL plugin so I've added an additional
funciton to ensure the HDF5_PLUGIN_PATH env var gets updated with the adios
install prefix
2021-01-13 15:02:30 -05:00
Mark W. Krentel
54a4f0fc35
intel-xed: add version 12.0.1 ( #20676 )
...
* intel-xed: add version 12.0.1
Rework the version numbers for intel-xed, now that xed has actual
releases and tags. Add releases 11.2.0 and 12.0.1. Rename 2019.03.01
to 10.2019.03 as a legacy version that fits in the new order.
Add variant +pic to compile libxed.a with PIC code so that it can be
linked into another shared library.
Add conflict for aarch64.
Add mwkrentel as maintainer.
2021-01-13 11:46:38 -08:00
Kurt Sansom
21a0a2f6bb
Miniconda: update ( #20814 )
2021-01-13 13:03:34 -06:00
steffen-AEI
bf0993c0d9
Add version 1.14.0 ( #20836 )
...
1.14.0 compiles with gcc@10.2.0, while 1.13.0 doesn't
2021-01-13 13:02:59 -06:00
Andrew-Dunning-NNL
a91dbcfa8c
py-pyfiglet:new recipe ( #20792 )
...
* py-pyfiglet:new recipe
* Update var/spack/repos/builtin/packages/py-pyfiglet/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-pyfiglet: use pypi url
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-13 12:54:40 -06:00
Harmen Stoppels
3f1c264148
dbcsr: added rocm support ( #20835 )
...
Co-authored-by: Tiziano Müller <tm@dev-zero.ch>
2021-01-13 15:54:23 +01:00
Glenn Johnson
b9dfda19c1
r-blockmodeling: added v1.0.0 ( #20820 )
2021-01-13 15:45:59 +01:00
Glenn Johnson
661b94eba5
r-xfun: added v0.20 ( #20821 )
2021-01-13 15:19:14 +01:00
Glenn Johnson
241c8a0695
r-boot: added v1.3-25 ( #20823 )
2021-01-13 15:18:36 +01:00
Harmen Stoppels
dec35566d2
hipblas: add dependency on rocsolver ( #20832 )
2021-01-13 15:14:58 +01:00
Christoph Junghans
8af010ce5d
votca-*: add v1.6.4 ( #20822 )
...
* votca-tools: add v1.6.4
* votca-csg: add v1.6.4
* votca-csg-tutorials: add v1.6.4
* votca-csgapps: add v1.6.4
* votca-xtp: add v1.6.4
* csgapps: master/stable version got merged into votca-csg
2021-01-13 07:07:53 -07:00
darmac
ccc1bb7324
libtomlc99: added v0.2020.12.23 ( #20825 )
2021-01-13 09:55:06 +01:00
Mark W. Krentel
991ff2fd94
hpctoolkit: add variant to support rocm ( #20826 )
...
Add early support for ROCM on AMD GPUs, for develop branch only.
Requires ROCM packages to be specified as external packages.
2021-01-13 09:54:17 +01:00
darmac
8b9f4d53da
solr: add java as runtime dependency ( #20827 )
2021-01-13 09:52:00 +01:00
a-saitoh-fj
5cfa3d5c59
libzmq: add libbsd as a dependency ( #20828 )
...
libzmq started using strlcpy from v4.3.3
2021-01-13 09:48:03 +01:00
Tiziano Müller
5443558717
cp2k: add v8.1 ( #20829 )
2021-01-13 09:39:35 +01:00
Massimiliano Culpo
0bd76ac9e6
concretizer: require at least a dependency type to say the dependency holds
...
fixes #20784
Similarly to the previous bug, here we were deducing
conditions to be imposed on nodes that were not part
of the DAG.
2021-01-12 22:23:39 -08:00
Massimiliano Culpo
ed8fe68cf2
concretizer: dependency conditions cannot hold if package is external
...
fixes #20736
Before this one line fix we were erroneously deducing
that dependency conditions hold even if a package
was external.
This may result in answer sets that contain imposed
conditions on a node without the node being present
in the DAG, hence #20736 .
2021-01-12 22:23:39 -08:00
Robert Blake
a2eb587a95
py-torchvision@0.5.0 depends on py-torch@1.4.1 ( #20811 )
2021-01-12 17:13:43 -06:00
Massimiliano Culpo
b3419c06c5
libyogrt: remove conflicts triggered by an invalid value ( #20794 )
...
fixes #20611
The conflict was triggered by an invalid value of the
'scheduler' variant. This causes Spack to error when libyogrt
facts are validated by the ASP-based concretizer.
2021-01-12 17:11:50 -06:00
archxlith
e10c0a6a34
New package [py-pylops] ( #20777 )
...
* New package [py-pylops]
* [py-pylops] Seperated optional dependecies into a variant called advanced
2021-01-12 12:36:53 -06:00
Harmen Stoppels
1d7babe955
dbcsr, cp2k: fix cuda arch conflicts in asp concretizer ( #20784 )
2021-01-12 18:01:32 +01:00
christopher coffey
ecc59de51d
kraken2: added v2.1.1 ( #20785 )
2021-01-12 10:43:55 +01:00
downloadico
1a45ce132d
hybrid-lambda: added new package ( #20754 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-12 10:42:23 +01:00
ketsubouchi
506da6891a
dsqss: new package at v2.0.3 ( #20723 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-12 10:00:30 +01:00
a-saitoh-fj
c6f13cb20f
py-distributed: added v2020.12.0 ( #20722 )
2021-01-12 09:57:53 +01:00
Harmen Stoppels
a2a0262f79
hip: fix naming of libraries when installing from tarballs ( #20780 )
...
There's two issues with hip where it tries to autodetect the patch
version number from git (when installed), but it does not check if it
even is inside of a git repo. The result is we end up with a shared lib
with a trailing dash in the library suffix: `libamd64.so.x.y.z-`, which
confuses GCC. The patch tries to check if the `.git` folder exists, and
if it does not, it handles version numbering the same as when git was
not installed previously.
2021-01-12 09:48:03 +01:00
archxlith
60a58d89e7
New package [py-scikit-fmm] ( #20775 )
...
* New package [py-scikit-fmm]
* [py-scikit-fmm] Removed redundant depends_on
2021-01-11 16:36:29 -06:00
AMD Toolchain Support
e7ed832c8d
spack recipe for amdlibm ( #20487 )
2021-01-11 12:13:54 -08:00
archxlith
8066ca8a8e
New package [py-spgl1] ( #20776 )
2021-01-11 12:49:36 -06:00
AMD Toolchain Support
de3504ca29
wrf: add AOCC support for v4.2 ( #20772 )
2021-01-11 12:13:59 +01:00
Adam J. Stewart
ec0226ec6e
libquo: add maintainer ( #20583 )
2021-01-11 11:55:53 +01:00
lorddavidiii
a9d6e69789
New versions of opencl-c-headers, opencl-clhpp and ocl-icd ( #20724 )
...
* opencl-c-headers: add new version 2020.12.18
* opencl-clhpp: add new version 2.0.13
* opencl-headers: now supports OpenCL 3.0 with new versions of opencl-c-headers and opencl-clhpp
* ocl-icd: add new version 2.2.14 add now can provide OpenCL 3.0
2021-01-11 11:39:02 +01:00
Erik Schnetter
e9c2bc5d7f
gsl: added v2.6 ( #20726 )
2021-01-11 11:13:44 +01:00
darmac
c199f37e94
ply: added new package ( #20764 )
2021-01-11 10:46:04 +01:00
Erik Schnetter
9049829c8e
asdf-cxx: correct swig dependency details ( #20752 )
2021-01-11 10:29:55 +01:00
Axel Huebl
53b70451fd
openPMD-api: added v0.13.1 ( #20761 )
2021-01-11 09:55:26 +01:00
Aurelien Bouteiller
63eabae0ec
PaRSEC: added new package ( #20170 )
...
PaRSEC: the Parallel Runtime Scheduler and Execution Controller for micro-tasks on distributed heterogeneous systems.
Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
2021-01-11 09:25:26 +01:00
Keita Iwabuchi
9a1ab9a8a3
metall: added v0.8 and v0.9 ( #20763 )
2021-01-11 09:11:09 +01:00
Erik Schnetter
dc0deb3e3d
hwloc: New version 2.4.0 ( #20727 )
...
New versions 1.11.12, 1.11.13, 2.3.0, 2.4.0.
2021-01-10 22:21:26 +01:00
Teodor Nikolov
a190876bdc
COSMA: latest version ( #20760 )
2021-01-10 19:58:30 +01:00
eugeneswalker
d6ba623669
llvm-amdgpu: add variant: openmp (bool) ( #20759 )
2021-01-10 19:57:28 +01:00
Erik Schnetter
5dacb1b550
libjpeg-turbo: added v2.05 and v2.06 ( #20770 )
2021-01-10 10:36:27 +01:00
Erik Schnetter
dc52168feb
libevent: added v2.1.12, v2.1.11 and v2.1.10 ( #20771 )
2021-01-10 10:35:50 +01:00
Andrew W Elble
0c1e99b3c8
py-tensorflow: version updates, add 2.4.0 ( #20702 )
...
* py-tensorflow: 2.4.0 and dependency updates
* minor version updates
* fix numpy dependency
* dependency rework: compatible release issues, start to clarify cuda versions
* --incompatible_no_support_tools_in_action_inputs was removed in bazel 3.6
* adjustment to versions of cuda dependency, also make sure that
patches/filters still apply to certain release trains.
* python 3.8 and tf < 2.2 have issues
* missed py-grpcio version bump
2021-01-09 12:03:49 -06:00
Seth R. Johnson
1e3f6489c4
ForTrilinos: add version 2.0.0 ( #20695 )
...
I finally figured out how to get version 2.0.0 to play nice with the dev
versions. Yuck.
2021-01-08 15:48:23 -05:00
Robert Cohn
ea0b001597
intel-oneapi-mpi: virtual provider support ( #20732 )
...
Set up environment and dependent packages properly when building
with intel-oneapi-mpi as a dependency MPI provider (e.g. point to
mpicc compiler wrapper).
2021-01-08 10:47:03 -08:00
mic84
1d4cbcd93f
amrex: expand CUDA support ( #20740 )
...
* amrex: expand CUDA support
2021-01-08 09:44:59 -08:00
Robert Underwood
2f19346c9a
py-scikit-learn: do parallel builds of C extension ( #20733 )
...
Enabled parallel builds of the C-extension upto the parallelism allowed
by spack.
https://scikit-learn.org/stable/developers/advanced_installation.html#parallel-builds
2021-01-07 14:58:33 -06:00
Jen Herting
b6e32a265b
New package: py-testfixtures ( #20432 )
...
* [py-testfixtures] copied from slpits
* [py-testfixtures] removed extends('python')
* [py-testfixtures] removed unnecessary dependencies
2021-01-07 12:29:33 -06:00
