Commit Graph

39344 Commits

Author SHA1 Message Date
Mathew Cleveland
b0b9cf15f7
add a '+no_warning' variant to METIS to prevent pervasive warning (#47452)
* add a '+no_warning' variant to metis to prevent prevasive warning
* fix formating

---------

Co-authored-by: Cleveland <cleveland@lanl.gov>
Co-authored-by: mcourtois <mathieu.courtois@gmail.com>
2024-12-03 17:02:36 -08:00
v
8898e14e69
update py-numl and py-nugraph recipes (#47680)
* update py-numl and py-nugraph recipes

this commit adds the develop branch as a valid option for each of these two packages. in order to enable this, package tarballs are now retrieved from the github source repository instead of pypi, and their checksums and the build system have been updated accordingly.

* rename versions "develop" -> "main" to be consistent with branch name
2024-12-03 16:59:33 -08:00
Buldram
63c72634ea
nim: add latest versions (#47844)
* nim: add latest versions
  In addition:
  - Create separate build and install phases.
  - Remove koch nimble call as it's redundant with koch tools.
  - Install all additional tools bundled with Nim instead of only Nimble.
* Fix 1.6 version
* nim: add devel
  In addition:
  - Fix build accessing user config/cache
2024-12-03 16:57:59 -08:00
Carson Woods
a7eacd77e3
bug fix: updated warning message to reflect impending v1.0 release (#47887) 2024-12-03 17:16:36 +01:00
Cédric Chevalier
09b7ea0400
Bump Kokkos and Kokkos-kernels to 4.5.00 (#47809)
* Bump Kokkos and Kokkos-kernels to 4.5.00

* petsc@:3.22 add a conflict with this new version of kokkos

* Update kokkos/kokkos-kernel dependency

---------

Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2024-12-03 09:09:25 -07:00
Harmen Stoppels
b31dd46ab8
style.py: do not remove import spack in packages (#47895) 2024-12-03 16:04:18 +01:00
Harmen Stoppels
ad7417dee9
nwchem: add resource, remove patch (#47892)
fixes a build failure due to broken URL and improves nwchem build without internet
2024-12-03 14:09:05 +01:00
Wouter Deconinck
c3de3b0b6f
tar: add v1.35 (fix CVEs) (#47426) 2024-12-03 13:26:04 +01:00
Harmen Stoppels
6da9bf226a
python: drop nis module also for < 3.13 (#47862)
the nis module was removed in python 3.13
we had it default to ~nis
no package requires +nis
required dependencies for +nis were missing

so better to remove the nis module entirely.
2024-12-03 13:01:08 +01:00
Auriane R.
b3ee954e5b
Remove duplicate version (#47880) 2024-12-03 10:14:47 +01:00
napulath
db090b0cad
Update package.py (#47885) 2024-12-03 08:24:28 +01:00
Massimiliano Culpo
3a6c361a85
cgns: make fortran dependency optional (#47867) 2024-12-03 06:18:37 +01:00
Adam J. Stewart
bb5bd030d4
py-rasterio: add v1.4.3 (#47881) 2024-12-03 06:10:20 +01:00
dependabot[bot]
b9c60f96ea
build(deps): bump pytest from 8.3.3 to 8.3.4 in /lib/spack/docs (#47882)
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.3.3 to 8.3.4.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](https://github.com/pytest-dev/pytest/compare/8.3.3...8.3.4)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-12-03 06:07:27 +01:00
Stephen Nicholas Swatman
6b16c64c0e
acts dependencies: new versions as of 2024/12/02 (#47787)
* acts dependencies: new versions as of 2024/11/25

This commit adds a new version of detray and two new versions of vecmem.

* acts dependencies: new versions as of 2024/12/02

This commit adds version 38 of ACTS and a new version of detray.
2024-12-02 19:50:25 -06:00
Andrey Perestoronin
3ea970746d
add compilers packages (#47877) 2024-12-02 15:53:56 -07:00
Satish Balay
d8f2e080e6
petsc, py-petsc4py: add v3.22.2 (#47845) 2024-12-02 14:21:31 -08:00
Harmen Stoppels
ecb8a48376
libseccomp: python forward compat bound (#47876)
* libseccomp: python forward compat bound

* include 2.5.5

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-12-02 14:59:40 -07:00
Massimiliano Culpo
30176582e4
py-torchvision: add dependency on c (#47873) 2024-12-02 22:23:58 +01:00
Massimiliano Culpo
ac17e8bea4
utf8cpp: move to GitHub, make it a CMake package (#47870) 2024-12-02 14:14:24 -07:00
Massimiliano Culpo
c30c85a99c
seacas: add a conditional dependency on fortran (#47871)
* seacas: remove unnecessary dependency on fortran
* seacas: add a conditional dependency on fortran
2024-12-02 13:13:14 -08:00
Michael Schlottke-Lakemper
2ae8eb6686
Update HOHQmesh package with newer versions (#47861) 2024-12-02 12:29:45 -08:00
Jose E. Roman
b5cc5b701c
New patch release SLEPc 3.22.2 (#47859) 2024-12-02 12:06:52 -08:00
Wouter Deconinck
8e7641e584
onnx: set CMAKE_CXX_STANDARD to abseil-cpp cxxstd value (#47858) 2024-12-02 11:56:33 -08:00
Weiqun Zhang
e692d401eb
amrex: add v24.12 (#47857) 2024-12-02 11:55:08 -08:00
Massimiliano Culpo
99319b1d91
oneapi-level-zero: add dependency on c (#47874) 2024-12-02 12:48:49 -07:00
Satish Balay
839ed9447c
trilinos@14.4.0 revert kokkos-kernel dependency - as this breaks builds (#47852) 2024-12-02 11:44:37 -08:00
afzpatel
8e5a040985
ucc: add ROCm and rccl support (#46580) 2024-12-02 20:43:53 +01:00
Stephen Nicholas Swatman
5ddbb1566d
benchmark: add version 1.9.1 (#47860)
This commit adds version 1.9.1 of Google Benchmark.
2024-12-02 11:42:38 -08:00
Massimiliano Culpo
eb17680d28
double-conversion: add dependency on c, and c++ (#47869) 2024-12-02 12:38:16 -07:00
Massimiliano Culpo
f4d81be9cf
py-torch-nvidia-apex: add dependency on C (#47868) 2024-12-02 20:37:33 +01:00
Massimiliano Culpo
ea5ffe35f5
configuration: set egl as buildable:false (#47865) 2024-12-02 11:33:01 -08:00
Wouter Deconinck
1e37a77e72
mlpack: depends_on py-setuptools (#47828) 2024-12-02 12:04:53 +01:00
Todd Gamblin
29427d3e9e
ruff: add v0.8.1 (#47851)
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-11-30 10:49:47 +01:00
Todd Gamblin
2a2d1989c1
version_types: clean up type hierarchy and add annotations (#47781)
In preparation for adding `when=` to `version()`, I'm cleaning up the types in
`version_types` and making sure the methods here pass `mypy` checks. This started as an
attempt to use `ConcreteVersion` outside of `spack.version` and grew into a larger type
refactor.

The hierarchy now looks like this:

* `VersionType`
  * `ConcreteVersion`
    * `StandardVersion`
    * `GitVersion`
  * `ClosedOpenRange`
  * `VersionList`

Note that the top-level thing can't easily be `Version` as that is a method and it
returns only `ConcreteVersion` right now. I *could* do something fancy with `__new__` to
make `Version` a synonym for the `ConcreteVersion` constructor, which would allow it to
be used as a type. I could also do something similar with `VersionRange` but not sure if
it's worth it just to make these into types.

There are still some places where I think `GitVersion` might not be handled properly,
but I have not attempted to fix those here.

- [x] Add a top-level `VersionType` class that all version types extend from
- [x] Define and document common methods and rich comparisons on `VersionType`
- [x] Replace complicated `Union` types with `VersionType` and `ConcreteVersion` as needed
- [x] Annotate most methods (skipping `__getitem__` and friends as the typing is a pain)
- [x] Fix up the `VersionList` constructor a bit
- [x] Add cases to methods that weren't handling all `VersionType`s
- [x] Rework some places to clarify typing for `mypy`
- [x] Simplify / optimize _next_version
- [x] Make StandardVersion.string a property to enable lazy comparison

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-11-30 08:21:07 +01:00
Wouter Deconinck
c6e292f55f
py-nbdime: add v3.2.1 (#47445) 2024-11-29 15:59:11 -07:00
teddy
bf5e6b4aaf
py-mpi4py: create mpi.cfg file, this file is removed since v4.0.0, but API is retained #47584
Co-authored-by: t. chantrait <teddy.chantrait@cea.fr>
2024-11-29 13:28:21 -06:00
Adam J. Stewart
9760089089
VTK: mark Python version compatibility (#47814)
* VTK: mark Python version compatibility

* VTK 8.2.0 also only supports Python 3.7
2024-11-29 13:04:56 -06:00
dmagdavector
da7c5c551d
py-pip: add v23.2.1 -> v24.3.1 (#47753)
* py-pip: update to latest version 24.3.1 (plus some others)

* py-pip: note Python version dependency for new PIP versions
2024-11-29 17:18:19 +01:00
Harmen Stoppels
a575fa8529
gcc: add missing patches from Iain Sandoe's branch (#47843) 2024-11-29 08:10:04 +01:00
Massimiliano Culpo
39a65d88f6
fpm: add a dependency on c, and fortran (#47839)
Extracted from #45189

Build failure: https://gitlab.spack.io/spack/spack/-/jobs/13871774

Co-authored-by: Sebastian Ehlert <28669218+awvwgk@users.noreply.github.com>
2024-11-29 08:07:50 +01:00
Massimiliano Culpo
06ff8c88ac
py-torch-sparse: add a dependency on c (#47841)
Extracted from #45189

Build failure: https://gitlab.spack.io/spack/spack/-/jobs/13870876
2024-11-29 08:06:46 +01:00
Massimiliano Culpo
a96b67ce3d
miopen-hip: add a dependency on c (#47842)
Extracted from #45189

Build failure: https://gitlab.spack.io/spack/spack/-/jobs/13870957
2024-11-29 07:25:43 +01:00
Harmen Stoppels
67d494fa0b
filesystem.py: remove unused md5sum (#47832) 2024-11-28 18:43:21 +01:00
Harmen Stoppels
e37e53cfe8
traverse: add MixedDepthVisitor, use in cmake (#47750)
This visitor accepts the sub-dag of all nodes and unique edges that have
deptype X directly from given roots, or deptype Y transitively for any
of the roots.
2024-11-28 17:48:48 +01:00
Andrey Perestoronin
cf31d20d4c
add new packages (#47817) 2024-11-28 09:49:52 -05:00
Harmen Stoppels
b74db341c8
darwin: preserve hardlinks on codesign/install_name_tool (#47808) 2024-11-28 14:57:28 +01:00
Daryl W. Grunau
e88a3f6f85
eospac: version 6.5.12 (#47826)
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2024-11-28 12:32:35 +01:00
Massimiliano Culpo
9bd7483e73
Add further C and C++ dependencies to packages (#47821) 2024-11-28 10:50:35 +01:00
Harmen Stoppels
04c76fab63
hip: hints for find_package llvm/clang (#47788)
LLVM can be a transitive link dependency of hip through gl's dependency mesa, which uses it for software rendering.

In this case make sure llvm-amdgpu is found with find_package(LLVM) and
find_package(Clang) by setting LLVM_ROOT and Clang_ROOT.

That makes the patch of find_package's HINTS redundant, so remove that.
It did not work anyways, because CMAKE_PREFIX_PATH has higher precedence
than HINTS.
2024-11-28 10:23:09 +01:00