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Author SHA1 Message Date
Alec Scott
b17feb9b06 r-bit: add v4.0.5 (#37190) 2023-04-26 19:35:30 -05:00
Alec Scott
2e4a9f1abf r-loo: add v2.6.0 (#37205) 
* r-loo: add v2.6.0

* Split r dependency from other deps to align with common r package style
 2023-04-26 19:34:19 -05:00
Alec Scott
117d374a61 r-bookdown: add v0.33 (#37191) 
* r-bookdown: add v0.33

* Add r@3.5.0: dependency to package
 2023-04-26 19:33:18 -05:00
Alec Scott
67cf37d750 r-compositions: add v2.0-6 (#37192) 
* r-compositions: add v2.0-6

* Split r dependecies from other r packages to match common format
 2023-04-26 19:32:15 -05:00
Alec Scott
6e276ecb4c r-convevol: add v2.0.0 (#37193) 2023-04-26 19:31:34 -05:00
Alec Scott
8c6a3f15e5 r-desolve: add v1.35 (#37195) 2023-04-26 19:29:14 -05:00
Alec Scott
65bbd2a1e6 r-fastmap: add v1.1.1 (#37196) 2023-04-26 19:27:49 -05:00
Alec Scott
426f8e987b r-formatr: add v1.14 (#37197) 2023-04-26 19:27:11 -05:00
Alec Scott
a78e061117 r-ggvis: add v0.4.8 (#37198) 2023-04-26 19:26:24 -05:00
Alec Scott
17e14757e2 r-glmnet: add v4.1-7 (#37199) 
* r-glmnet: add v4.1-7

* Split r dependency from other deps to follow common format
 2023-04-26 19:25:42 -05:00
Alec Scott
2bb3553f24 r-insight: add v0.19.1 (#37200) 2023-04-26 19:24:55 -05:00
Alec Scott
6267a1f68d r-interp: add v1.1-4 (#37201) 
* r-interp: add v1.1-4

* split r dep from other dependencies to match common format
 2023-04-26 19:24:08 -05:00
Alec Scott
666ceb998c r-jomo: add v2.7-6 (#37202) 2023-04-26 19:23:09 -05:00
Alec Scott
e4cc4018c1 r-lattice: add v0.21-8 (#37204) 
* r-lattice: add v0.21-8

* Enforce a higher version of R as according to cran
 2023-04-26 19:12:26 -05:00
Alec Scott
5551b7a506 r-magic: add v1.6-1 (#37206) 2023-04-26 19:06:27 -05:00
Alec Scott
facc93a30e r-maptools: add v1.1-6 (#37207) 2023-04-26 19:05:29 -05:00
Alec Scott
b3101d1c85 r-meta: add v6.2-1 (#37208) 2023-04-26 19:04:07 -05:00
H. Joe Lee
0d7890baa5 spdk: add a new package (#35520) 
* spdk: add a new package
* chore: fix formatting and style
* fix: add rdma-core dependency
* fix: remove spdk < 23.01 versions per @soumagne review
* spdk: add 22.01.1 version
* spdk: address @soumagne reviews
* spdk: fix fio audit failure
* spdk: fix fio version and remove debugging info
 2023-04-26 16:38:14 -07:00
Wouter Deconinck
d43ae9fa10 scitokens-cpp: depends_on pkgconfig (#37168) 
A missing dependency, showing up as:
```console
#24 1113.1 3 errors found in build log:
#24 1113.1      20    -- Check for working CXX compiler: /opt/spack/lib/spack/env/gcc/g++ 
#24 1113.1            - skipped
#24 1113.1      21    -- Detecting CXX compile features
#24 1113.1      22    -- Detecting CXX compile features - done
#24 1113.1      23    -- Found CURL: /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/curl-
#24 1113.1            7.85.0-ca5zznsdkp2hwbnikha6sgqzcpuw74sc/lib/libcurl.so (found versio
#24 1113.1            n "7.85.0")
#24 1113.1      24    -- Found UUID : /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/util
#24 1113.1            -linux-uuid-2.38.1-45xrjgjjauvev5qarwji7xgmlnhqlzkh/lib/libuuid.so
#24 1113.1      25    -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE)
#24 1113.1   >> 26    CMake Error at /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake
#24 1113.1            -3.24.3-6doi3daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/Fi
#24 1113.1            ndPkgConfig.cmake:663 (message):
#24 1113.1      27      pkg-config tool not found
#24 1113.1      28    Call Stack (most recent call first):
#24 1113.1      29      /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake-3.24.3-6doi3
#24 1113.1            daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/FindPkgConfig.c
#24 1113.1            make:829 (_pkg_check_modules_internal)
#24 1113.1      30      CMakeLists.txt:39 (pkg_check_modules)
#24 1113.1      31    
#24 1113.1      32    
```

Ref: https://github.com/scitokens/scitokens-cpp/blob/v1.0.0/CMakeLists.txt#L32
 2023-04-27 00:02:55 +02:00
Trevor [LAS]
055e5abc93 py-ipyrad (#37160) 
* Adding py-ipyrad for testing

* py-ipyrad: placating flake8

* py-ipyrad: adding version 0.9.90, fixing hard coded path.

* py-ipyrad: use join_path instead of hard coded linux path

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipyrad: Removing unneeded dependencies

* py-ipyrad: Readded future (see ipyrad setup.py)

* py-ipyrad: Switch to an anchored link in the docs

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipyrad: Removed patch decorator

---------

Co-authored-by: snehring <snehring@iastate.edu>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2023-04-26 17:04:57 -04:00
Michael Kuhn
16f86c7f96 rocksdb: add 8.1.1 (#37169) 2023-04-26 10:07:42 -07:00
Michael Kuhn
0292568f97 libbson, mongo-c-driver: add 1.23.3 (#37175) 2023-04-26 10:05:45 -07:00
Gerhard Theurich
61c24dc7c3 esmf: add v8.4.2 (#37183) 2023-04-26 10:03:13 -07:00
Alec Scott
cbb8900e6e genrich: add v0.6.1 (#37184) 2023-04-26 10:01:59 -07:00
Alec Scott
6084b9be5b openwsman: add v2.7.2 (#37186) 2023-04-26 09:59:21 -07:00
Alec Scott
e4eba24191 shortstack: add v4.0.1 (#37187) 2023-04-26 09:58:27 -07:00
Alec Scott
aa0b013efe abyss: add v2.3.5 (#37209) 2023-04-26 09:28:48 -07:00
Alec Scott
9d49664679 advancecomp: add v2.5 (#37210) 2023-04-26 09:26:04 -07:00
Alec Scott
8c4bd595f3 barrnap: add v0.9 (#37212) 2023-04-26 09:19:27 -07:00
Alec Scott
8669844084 check: add v0.15.2 (#37216) 2023-04-26 09:18:49 -07:00
Alec Scott
2477fe2ff7 bowtie: add v1.3.1 (#37213) 2023-04-26 09:18:04 -07:00
Alec Scott
3f7ea01e9d faiss: add v1.7.4 (#37217) 2023-04-26 09:15:52 -07:00
Alec Scott
c334a16a2f nanoflann: add v1.4.3 (#37218) 2023-04-26 09:13:52 -07:00
Alec Scott
4fec857504 pestpp: add v5.2.3 (#37219) 2023-04-26 09:12:52 -07:00
Alec Scott
f859da6119 rinetd: add v0.73 (#37220) 2023-04-26 09:11:37 -07:00
Alec Scott
1c19eccf29 specfem3d-globe: add v8.0.0 (#37221) 2023-04-26 09:10:22 -07:00
Adam J. Stewart
1b7bf9a95b py-lightly: add v1.4.3 (#37178) 2023-04-26 17:47:40 +02:00
Adam J. Stewart
8e7b2c999a py-sphinx: add v6.2.1 (#37177) 2023-04-26 17:46:55 +02:00
Manuela Kuhn
dec0c540e9 py-wesanderson: add new package (#37182) 2023-04-26 10:29:20 -05:00
Adam J. Stewart
d74b02f59a py-tensorflow: add v2.11–2.12 (#36263) 2023-04-26 08:03:47 -05:00
Richard Berger
37335f8fcf flecsi: add 2.2.0 release, cleanup (#37158) 
* flecsi: add 2.2.0 release, cleanup

* flecsi: deprecate 1.x versions

* flecsi: add missing 1.4.1 release

* flecsi: add missing 2.0.0 release
 2023-04-26 05:52:15 -07:00
Thomas Madlener
eb4552542d elfutils package: fix +debuginfod installation issue (#36758) 
* elfutils cannot build against libarchive@3.62+iconv 
* elfutils needs libmicrohttpd version 0.9.50 or older
* elfutils: explicitly depend on pkg-config
* libmicrohttpd: Add several new versions
 2023-04-25 22:57:19 -07:00
Benjamin Meyers
b5f546b72b New: py-ax-platform; Update: py-botorch, py-gpytorch, py-linear-operator, py-pyro-ppl, py-typeguard (#37143) 2023-04-25 21:53:12 -04:00
Alec Scott
b2fb851d18 gmp: Add patch for MacOS M1/M2 machines to fix segfault (#37166) 
* Add patch for MacOS M1/M2 machines to fix segfault when using gmp

* Update var/spack/repos/builtin/packages/gmp/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Restrict patch to v6.2.1

* Update var/spack/repos/builtin/packages/gmp/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2023-04-25 20:43:15 -04:00
Simon Frasch
f4b0510156 spla: version 1.5.5 (#37173) 2023-04-25 20:03:59 -04:00
Austin McCartney
a371e1e645 Narrow patch diff context for zziplib package (#29236) 
The patch for the zziplib package applied for version 0.13.69 and
earlier includes a reference to Creative Commons
Attribution-NonCommercial-ShareAlike 2.0 Generic license, which
causes Flexera's ~expensive perl script~ FlexNet Code Insights open
source license and compliance tool to flag Spack as a non-commercial
product. This patch narrows the diff context in the patch to exclude
this text. The semantics of the patch file are unchanged.
 2023-04-25 19:58:18 -04:00
Cyrus Harrison
80881f9119 add ascent 0.9.1 release (#37139) 
* add ascent 0.9.1 release
* fix typo
 2023-04-25 12:54:24 -07:00
Adam J. Stewart
c82594de21 py-scipy: PyPI-based Python version support (#37137) 2023-04-25 12:42:24 -07:00
Adam J. Stewart
eb15d49d61 py-numpy: PyPI-based Python version support, add v1.24.3 (#37136) 
* py-numpy: add v1.24.3
* PyPI-based Python version support
* Sort in reverse order
 2023-04-25 10:55:10 -07:00
Harmen Stoppels
97beb2658b require: do not allow additional properties (#37174) 2023-04-25 11:52:51 +02:00