Commit Graph

49 Commits

Author SHA1 Message Date
Todd Gamblin
a8ccb8e116 copyrights: update all files with license headers for 2021
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
      `spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
      for oneapi.py
2021-01-02 12:12:00 -08:00
Jean-Paul Pelteret
821b195ba4
Fix scalapack build error (#19824) 2020-11-12 08:55:58 -06:00
Adam J. Stewart
a4dd8d5582
Scalapack: don't apply patches twice (#19662) 2020-11-01 15:15:04 -08:00
vijay kallesh
51a9473bf8
[NEW] Added amdfftw, amdlibflame and amdscalapack recipes (#19457)
* [NEW] Added amdfftw, amdlibflame and amdscalapack recipes

Updated base fftw, libflame and netlib-scalapack recipes
to accommodate the above listed AMD Optimizing CPU Libraries
which are a set of numerical routines optimized for AMD platforms.

Updated amdblis spack recipe

amdblis:
	1. updated with amdblis 2.2 release
amdfftw:
	1. "--enable-single" now work as synonym for "--enable-float"
amdlibflame:
	1. Added enable_or_disable_threads() to set value for "--enable-multithreading" flag
Libflame:
	1. Added enable_or_disable_threads() to set value for "--enable-multithreading" flag
	2. Corrected invocation of "enable_or_disable('threads')"

Change-Id: I9da0a2c2c4e2075b7fa2776e7cfe6548a2e0b32f

* Added amd-toolchain-support as maintainers

Added team github account amd-toolchain-support
as maintainers for all the recipes owned by
AMD Optimizing CPU Libraries (AOCL) team

Change-Id: I9a7969bd48fc42cfbb88dd7bd93e0802c6138582

* Incorporated review comments

Updated packages.yaml with aocl components
Handled Flake8 test failures

Change-Id: I0a03f02d8c9f326b2434ec907958c3de3a8e18eb

* Readded accidental removal of stream recipe

amdfftw:
	1. Updated the aocc clang selection as per spack standards
fftw:
	1. Currently apple-clang section is redundant,
	already it is handled in the conflict checks.

Change-Id: Idef4a3f61717eb81f321e0cd16e7ba9619eac846

* Fix for style and docs/validate (pull_request) test

unnumbered format placeholders from {} to {0}

Change-Id: If67a3374177ec067573e5504462d257712fafc05

* changed compiler references to Spack's compiler wrapper:spack_cc, spack_cxx, spack_fc

Change-Id: I7ae29c978fff16e37773913f14c84df232499763

* Removed 'single' variant from amdfftw recipe

Instead of conflict for apple-clang + openmp, handled this senario
via below available feature:
depends_on('llvm-openmp', when='%apple-clang +openmp')

Change-Id: I701b23d83e822a500ca3aaf2b60cc9ace09e13dc

* Added relevant info for users who prefers to use single precision

Change-Id: I3506e21da428ddef5fb7895b5aaed32c2a061ef6

* Minor changes on fftw, amdfftw and libflame

amdfftw:
	1. Removed escape symbol to the single quotes
	2. Rewording the conflict line from Recommended
	to Required

fftw:
	1. Reorded to following recommended sections:
	versions, variants, dependencies, providers,
	patches

libflame:
	1. Added provides entry for 5.1.0 version

Change-Id: I21ebff99b6dfde031763154693ecb3f1fa47b476

* Removed single quote from amdfftw docstring to fix style failures

Change-Id: Ife939a5a2f5ccbc8879b730c7bebfe2fcfef9332
2020-10-31 11:57:17 -05:00
rempke
6bad79fca0
netlib-scalapack: fixed compilation with gcc 10 (#17647) 2020-07-24 16:53:32 +02:00
Greg Becker
096bd69a94
prevent multiple version sigils in the same spec (#17246)
* prevent multiple version sigils in the same spec

* fix packages with malformed versions
2020-06-25 12:34:09 -05:00
Tomoki, Karatsu
c3be6d903a
cmake: modify FindMPI.cmake to treat Fujitsu MPI correctly (#16864) 2020-06-05 13:25:02 +02:00
Tomoki, Karatsu
821c729ec0
netlib-scalapack: specify MPI's location for Fujitsu-MPI. (#16798)
Fujitsu-MPI wrapper commands aren't recognized from 'FindMPI' 
function of 'cmake'. If we are using the Fujitsu compiler and Fujitsu MPI, 
specify the MPI path information explicitly.
2020-05-25 13:12:13 +02:00
Adam J. Stewart
284e450c91
Language-specific PIC flags (#15474)
* Language-specific PIC flags

* Add tests for every compiler flag

* Fix bad rebase

* pic_flag -> cxx_pic_flag
2020-04-17 16:28:51 -05:00
Todd Gamblin
4af6303086
copyright: update copyright dates for 2020 (#14328) 2019-12-30 22:36:56 -08:00
Piotr Luszczek
ae8a72c0da netlib-scalapack: Add int overflow patch (#14276) 2019-12-23 13:06:29 -06:00
Piotr Luszczek
2a3bf87484 Add new release and remove extraneous patches (#14273) 2019-12-22 18:10:19 -08:00
Todd Gamblin
62927654dd checksums: use sha256 checksums everywhere
We'd like to use a consistent checksum scheme everywhere so that we can:

    a) incorporate archive checksums into our specs and have a
       consistent hashing algorithm across all specs.

    b) index mirrors with a consistent type of checksum, and not one that
       is dependent on how spack packages are written.

- [x] convert existing md5, sha224, sha512, sha1 checksums to sha256
2019-10-12 07:19:43 -07:00
Satish Balay
d11b1b18f0
netlib-scalapack: fix compatibility with mpi2 i.e openmpi-4 (#11124) 2019-04-07 10:01:54 -05:00
Piotr Luszczek
f093515002 netlib-scalapack package: add CMake test patch (#10452)
Add patch to fix Fortran mangling in CMake test

This is a fix for builds with GCC 6/7/8 and CMake 2/3. It includes
a link to the issue where this is reported. For now, the Spack
package applies the patch to all releases >= 2.0.2
2019-02-07 20:58:27 -06:00
Todd Gamblin
6f50cd52ed copyright: update license headers for 2013-2019 copyright. 2019-01-01 00:44:28 -08:00
Todd Gamblin
eea786f4e8 relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers
- remove the old LGPL license headers from all files in Spack
- add SPDX headers to all files
  - core and most packages are (Apache-2.0 OR MIT)
  - a very small number of remaining packages are LGPL-2.1-only
2018-10-17 14:42:06 -07:00
Todd Gamblin
54f97d1dec
Update copyright on LLNL files for 2018. (#7592) 2018-03-24 12:13:52 -07:00
Veselin Dobrev
dbf849240e netlib-scalapack: add the libs property (#7265) 2018-02-18 10:19:03 +01:00
alalazo
e72b69732e Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
Todd Gamblin
05fa302655
Replace github.com/llnl/spack with github.com/spack/spack (#6142)
We moved to a new GitHub org! Now make the code and docs reflect that.
2017-11-04 17:08:04 -07:00
Michael Kuhn
84ae7872d3 Update copyright notices for 2017 (#5295) 2017-09-06 17:44:16 -10:00
Massimiliano Culpo
9be294de31 Changed every 'fpic' variant to 'pic' (#4969)
* Changed every 'fpic' variant to 'pic'. fixes #2463

Every variant that activates compilation of position independent code
has been changed to 'pic'. Hardcoded compiler flags in packages have
been substituted with `self.compiler.pic_flag`.

* Changed literal uses of '-fpic' to 'self.compiler.pic_flag'
2017-08-04 18:21:43 +02:00
Todd Gamblin
cac4362f64 Make LICENSE recognizable by GitHub. (#4598) 2017-06-24 22:22:55 -07:00
Massimiliano Culpo
f9c0348891 cp2k: update to 4.1 + update of dependencies (#3561)
* libint: updated version, ported to AutotoolsPackage

* elpa: updated version, ported to AutotoolsPackage

* wannier90: updated version, ported to MakefilePackage

* pexsi: updated version, ported to MakefilePackage

* cp2k: updated version, removed wannier 90 from dependencies if cp2k@4.1

* plumed: updated version

Modifications:

* modules has been turned into a single variant, as different versions
  have different modules available
* added dictionaries for patches

* netlib-scalapack: ported to CMakePackage
2017-03-30 09:46:05 -05:00
Adam J. Stewart
a2d70a45fb Allow find_libraries to accept lists or strings (#3363)
* Allow find_libraries to accept lists or strings

* Convert one more example from list to string
2017-03-04 11:23:57 -06:00
Massimiliano Culpo
ed582cef68 New interface for passing build information among specs (#1875)
- Added a new interface for Specs to pass build information
  - Calls forwarded from Spec to Package are now explicit
  - Added descriptor within Spec to manage forwarding
  - Added state in Spec to maintain query information
  - Modified a few packages (the one involved in spack install pexsi) to showcase changes

- This uses an object wrapper to `spec` to implement the `libs` sub-calls.
  - wrapper is returned from `__getitem__` only if spec is concrete
  - allows packagers to access build information easily
2017-03-02 10:01:29 -08:00
Denis Davydov
1e10309ff7 some fixes to blas/lapack usage in packages (#1852)
* atlas: fix unit test

* openblas: remove symlinks; use lapack_libs.ld_flags in the test

* mkl: fix openmp variant of blas/lapack libs

* intel-parallel-studio: fix openmp variant of blas/lapack libs

* netlib-scalapack: fix blas/lapack for multilib case (e.g. mkl)

* arpack-ng: fix blas/lapack for multilib case (e.g. mkl)

* petsc: explicitly specify blas/lapack

* minor

* cantera: fix blas/lapack usage

* ipopt: fix blas/lapack usage

* netlib-lapack: fix external blas usage

* mfem: fix lapack/blas usage

* superlu-mt: fix blas usage

* flake8 fixes
2016-09-26 10:37:23 -07:00
Massimiliano Culpo
d848559f70 Reworking of lapack_shared_libs and similar properties (#1682)
* Turned <provider>_libs into an iterable

Modifications :
- added class LibraryList + unit tests
- added convenience functions `find_libraries` and `dedupe`
- modifed non Intel blas/lapack providers
- modified packages using blas_shared_libs and similar functions

* atlas : added pthread variant

* intel packages : added lapack_libs and blas_libs

* find_library_path : removed unused function

* PR review : fixed last issues

* LibraryList : added test on __add__ return type

* LibraryList : added __radd__ fixed unit tests

fix : failing unit tests due to missing `self`

* cp2k and dependecies : fixed blas-lapack related statements in package.py
2016-09-21 12:27:59 -07:00
Kelly Thompson
3d3614e522 Update to allow netlib-scalapack to build against netlib-lapack. (#1539) 2016-09-21 04:10:30 -07:00
Todd Gamblin
240f1fd223 Spack packages now PEP8 compliant. 2016-08-10 16:33:39 -07:00
Todd Gamblin
fa0bbb57ea Merge pull request #1270 from davydden/pkg/mumps_scalapack_fix_blas
Pkg/mumps scalapack fix blas
2016-07-18 13:57:26 -07:00
Denis Davydov
2e4966c854 netlib-scalapack: use dso_suffix 2016-07-18 10:11:18 +02:00
Denis Davydov
561748a063 netlib-scalapack: flake8 fixes 2016-07-16 08:03:54 +02:00
Denis Davydov
6175ce7559 netlib-scalapack: make sure Spack's Lapack is used 2016-07-16 07:37:38 +02:00
Ben Boeckel
6fd45520da deptypes: mark deptypes in packages 2016-07-14 16:21:46 -04:00
Todd Gamblin
e7ced54369 Correct LLNL LGPL license template for clarity. 2016-05-11 21:22:25 -07:00
Erik Schnetter
aaf2830b8b Require cmake 2016-04-04 19:40:05 -04:00
Denis Davydov
7eca1284c8 metis/parmetis/boost/oce/scalapack: correct install_name on Darwin via a global function. 2016-03-28 00:22:25 +02:00
Todd Gamblin
a26992ef55 Change from PR #552: rename setup_dependent_python_module -> setup_dependent_package
- Fixed in package.py
- Fixed wrong prototypes in packages that use it.
- Fixed build_environment to set module variables properly
  - added hacky fix to ensure spec/package consistency in build processes.
  - Need to think about defensive spec copy done by `Repo.get`.  May be
    time to think about an immutable spec implementation.
2016-03-22 01:56:16 -07:00
Todd Gamblin
439d47b4e4 Refactor environment setup.
- Gave setup_environment and setup_dependent_environment more similar
  signatures. They now allows editing the Spack env and the runtime
  env for *this* package and dependents, respectively.

- modify_module renamed to setup_dependent_python_module for symmetry
  with setup_dependent_environment and to avoid confusion with
  environment modules.

- removed need for patching Package objects at runtime.

- adjust packages to reflect these changes.
2016-03-21 16:01:35 -07:00
alalazo
fbeffee91e Merge branch 'develop' of https://github.com/LLNL/spack into features/env_objects_flying_around
Conflicts:
	lib/spack/spack/package.py
	var/spack/repos/builtin/packages/netlib-scalapack/package.py
2016-03-21 09:46:49 +01:00
Denis Davydov
95ad2875b6 fix scalapack suffix for osx 2016-03-20 09:27:07 +01:00
alalazo
f0f0663d1b package : split environment_modifications into setup_environment and setup_dependent_environment.
package : renamed `module_modifications` to `modify_module` for consistency
2016-03-17 15:11:39 +01:00
alalazo
572cb93bf8 package : renamed setup_dependent_environment to module_modifications 2016-03-15 14:05:30 +01:00
alalazo
c85888eb57 package : added environment_modifications 2016-03-15 13:36:41 +01:00
Nicolas Richart
f1d8f30342 Bug fix: precedence in % operator seems to change depending in the python version 2016-01-27 10:54:41 +01:00
Nicolas Richart
b71b478a36 Minor correction to install mumps+mpi 2016-01-20 18:31:02 +01:00
Nicolas Richart
974fc65e0f renaming packages to follow changes on develop 2016-01-20 14:38:55 +01:00