Commit Graph

26148 Commits

Author SHA1 Message Date
Thomas Madlener
c832ac28ae genfit package: add googletest dependency (#24467) 2021-06-29 22:37:25 -07:00
Axel Huebl
a647ae2aeb HiPACE++: FFTW+OpenMP (#24575)
- change the default compute backend: we just start to add OpenMP support
- FFTW: prefer with OpenMP acceleration for OpenMP compute backend
2021-06-29 20:55:22 -06:00
Jen Herting
d00082e70b New package: py-datasets (#24597)
* [py-datasets] created template

* [py-datasets] added dependencies

* [py-datasets] requires py-pyarrow with +parquet

* [py-datasets] Final cleanup

- added homepage
- added description
- removed fixmes
2021-06-29 20:28:23 -06:00
Jen Herting
501f87fb22 dependency for py-torchmeta (#24595)
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-06-29 18:58:21 -06:00
Sergey Kosukhin
55dd306790 hdf5: a follow-up to #18937 (#23820) 2021-06-29 18:34:12 -06:00
Adam J. Stewart
a2b7f9997d spack style: warn if flake8-import-order is missing (#24590) 2021-06-29 23:49:18 +00:00
Manuela Kuhn
1c6504d2f5 py-nipype: add 1.6.1 (#24584) 2021-06-29 17:04:23 -06:00
Manuela Kuhn
cc1285c1e1 py-nilearn: add 0.8.0 (#24583) 2021-06-29 16:04:28 -06:00
Harmen Stoppels
304249604a Fix prefix-collision detection for projections (#24049)
If two Specs have the same hash (and prefix) but are not equal, Spack
originally had logic to detect this and raise an error (since both
cannot be installed in the same place). Recently this has eroded and
the check no-longer works; moreover, when defining projections (which
may truncate the hash or other distinguishing properties from the
prefix) Spack was also failing to detect collisions (in both of these
cases, Spack would overwrite the old prefix with the new Spec).

This PR maintains a list of all "taken" prefixes: if a hash is not
registered (i.e. recorded as installed in the database) but the prefix
is occupied, that is a collision. This can detect collisions created
by defining projections (specifically when they omit the hash).

The PR does not detect collisions where specs have the same hash
(and prefix) but are not equal.
2021-06-29 14:44:56 -07:00
Manuela Kuhn
1eb2798c43 py-numpy: conflict with gcc11 and switch master to main (#24573)
Fix syntax of conflict between numpy 1.21.0 and gcc11 to that the clingo
concretizer recognizes it.
In addition the upstream master branch was renamed to main.
2021-06-29 15:40:32 -06:00
Jen Herting
e284cd136a New package: py-pyautogui (#24572)
* [py-pyautogui] created template

* [py-pyautogui] added some unconditional dependencies

* [py-pyautogui] Final cleanup

- added homepage
- added description
- removed fixmes

* [py-pyautogui] added missing dependencies
2021-06-29 13:04:20 -06:00
Christoph Conrads
f5474a2b8b CGNS: add CMake dependency (#24564) 2021-06-29 12:49:26 -06:00
holrock
c824cad2ea ruby: add v3.0.1 (#24560) 2021-06-29 12:22:38 -06:00
Vinícius
3fe1ecd807 simgrid: add v3.27, update package (#24513) 2021-06-29 12:07:22 -06:00
Massimiliano Culpo
2b65c53d2b vermin: show line numbers of violations (#24580)
This commit runs vermin with the --violations option
that shows details of the violations to target requirements.
2021-06-29 19:41:22 +02:00
Jen Herting
327cca7e2e New package: py-huggingface-hub (#24588)
* [py-huggingface-hub] created template

* [py-huggingface-hub] added dependencies

* [py-huggingface-hub] added version 0.0.8

* [py-huggingface-hub] Final cleanup

- added description
- added homepage
- removed fixmes
2021-06-29 10:49:10 -06:00
Scott Wittenburg
09fa155333 pipelines: build warpx on instance with more memory (#24592) 2021-06-29 18:06:30 +02:00
Chuck Atkins
a7b6149cc0 libzmq: Fix gcc11 build failure (#24563) 2021-06-29 06:33:35 +02:00
Manuela Kuhn
b87d9c29c1 py-scipy: fix missing py-cython dependency (#24548) 2021-06-28 14:07:24 -06:00
Larry Knox
cc20dbf645 Hdf5 cmake (#18937)
* Switch hdf5 package from autotools to cmake.

* Add variant for building with zlib, default to ON.

* Update for format requirements.

* Format change.

* Fix breakage from last merge from develop.
Switch szip to use libaec (unrestricted encryption).
Remove 'static' variant:  static libs will only be installed when
~shared.

* Improve args based on suggestions from pull request.

* Update code URL to github.com
Add/modify 4 depends_on lines to fix running "spack graph --deptype=link hdf5".

* Remove trailing whitespace.

* Remove dependencies added solely to make "spack greph --type=link" work.

* Add new version HDF5 1.8.22.

* Remove unnecessary java_check.

* Fix whitespace for style checks.

* Reverted zlib version dependency to 1.1.2:.
zlib variant removed.
api version default renamed "default".

* Remove blank line.

* Whitespace corrections.

* iRemoved unnecessary 'debug' variant.

* Fix typo in version number in conflict for '+szip'.

* Set default for tools variant to True.
Remove patch functions dependent on 'libtool' file that cmake doesn't
produce.

* Remove line to set ONLY_SHARED_LIBS to true.
Add post_install code to install only one version of tools with shared
linkage and original tool names.

* Remove trailing white space and import of glob package not used.

* Leave BUILD_TESTING set to default which is ON.

* Remove  post_install code to install only one version of tools because
some dependent packages running tests in e4s testing are using
h5diff-shared.  Keep both tools versions for now.

* No longer need to import os.
2021-06-28 13:42:54 -06:00
Michael Kuhn
9a9b5dee2e glib: add v2.68.3 (#24558) 2021-06-28 12:01:24 -06:00
Robert Underwood
69d69cbc79 GDB: resolve warnings about imp being deprecated (#24448)
This patch has already been accepted into gdb's trunk, we just adopting
it earlier here since it is small and gives a better user experience.
2021-06-28 07:16:28 -06:00
Adam J. Stewart
2284007db9 Use flake8-import-order to enforce PEP-8 compliance (#23947) 2021-06-28 08:03:20 -05:00
Mikael Simberg
744cedc7e9 Add Asio package (#24485) 2021-06-28 12:04:19 +02:00
Olivier Cessenat
e631ccc6f7 New Package: visit-mfem (#22906) 2021-06-28 12:02:41 +02:00
Kai Germaschewski
3cfc1dbc14 pfunit: fix gcc10 +mpi (#23878)
Instead of refusing to build +mpi with gcc10, add what I guess is now
the standard workaround, ie., `-fallow-argument-mismatch`.

Getting this into pfunit's cmake-based but kinda non-standard build  isi
a bit ugly, but you gotta do what you gotta do...
2021-06-28 11:33:23 +02:00
Jianwen
2970c02639 Fix kokkos version number in lammps. (#24436) 2021-06-28 11:23:34 +02:00
Manuela Kuhn
77a98cabfa llvm: add patch for gcc11 (#24363)
llvm10 was not compiling with gcc due to missing header (see #24270)
2021-06-28 11:18:53 +02:00
Asher Mancinelli
b6aea0d6bf Update ipopt versions, fix blas/lapack flags (#24447)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-06-28 11:14:35 +02:00
Axel Huebl
c06db97970 CUDA: 11.0.3 (11.0 "Update 1") (#24481)
Add CUDA 11.0.3.

This release adds new features such as NVCC flags
`--forward-unknown-to-host-compiler` and
`--forward-unknown-to-host-linker`
2021-06-28 10:53:47 +02:00
miheer vaidya
90dc90e8d1 barvinok: add new package (#24477) 2021-06-28 10:52:45 +02:00
Erik Schnetter
f5ef532bdc silo: force autoreconf when building share libs (#24388) 2021-06-28 10:44:38 +02:00
lorddavidiii
2bd2ef27a2 ocl-icd, opencl-c-headers and opencl-clhpp: add new versions (#24499) 2021-06-28 02:13:24 -06:00
Scott McMillan
a4a393d097 Update Boost package to support building the latest with the NV compilers (#24541)
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2021-06-28 01:19:36 -06:00
Chris White
a6ce000e09 RAJA + Umpire: CUDA Arch fixes (#24531) 2021-06-28 09:09:01 +02:00
Manuela Kuhn
3e65828a7e pandoc: add 2.11.4 and 2.14.0.3 (#24542) 2021-06-28 08:50:39 +02:00
albestro
6f950bc8ee cppzmq: add v4.7.1 and "drafts" variant (#24555) 2021-06-28 08:31:04 +02:00
Dylan Simon
963b931309 docs: link projections docs to spec format (#24478) 2021-06-27 08:38:28 +00:00
Anton Kozhevnikov
9bd9cc2c7b swith profiler on/off (#24547) 2021-06-26 19:25:15 +02:00
Alec Scott
4c149ade7f accumulo: add v2.0.1 (#24409) 2021-06-26 05:07:13 -06:00
Hadrien G
ecc950d10c dd4hep: fix hash for version 01-17 (#24425)
Version 1.17 of DD4hep was renamed from "01-17-00" to "01-17", in line 
with the naming conventions of previous releases. Since release archives
contain a subdirectory with the version string in it, this changes the contents
of the tarball ever so slightly, so the SHA-256 checksum must change as well.
2021-06-26 12:34:31 +02:00
Stephen Herbein
9b2e7e6140 flux: add latest versions (core v0.27.0, sched v0.16.0) (#24546) 2021-06-26 04:13:18 -06:00
Cameron Smith
19a973eca0 pumi: add v2.2.6 (#24525) 2021-06-26 11:27:52 +02:00
Manuela Kuhn
ce16503bd3 r-rmarkdown: add 2.9 (#24539) 2021-06-26 11:27:17 +02:00
Manuela Kuhn
ef67ecde60 r-tinytex: add 0.32 (#24538) 2021-06-26 11:27:04 +02:00
Manuela Kuhn
2b1916d845 r-knitr: add 1.33 (#24537) 2021-06-26 11:26:46 +02:00
Manuela Kuhn
469e580034 r-mime: add 0.11 (#24536) 2021-06-26 11:26:25 +02:00
Manuela Kuhn
80585562c9 r-htmltools: add 0.5.1.1 (#24535) 2021-06-26 11:26:06 +02:00
Manuela Kuhn
2aa9e337ee soci: add 4.0.2 and multiple variants (#24543)
Fix url to find newer versions, add newest version 4.0.2 and add
variants for
- cxxstd: To use a specific c++ standard
- static: Enable or disable build of static libraries
- boost: Boost support
- sqlite: SQLite support
- postgresql: PostgreSQL support
2021-06-26 03:25:47 -06:00
Manuela Kuhn
06a1cf2449 r-highr: add 0.9 (#24534) 2021-06-26 11:25:31 +02:00