Commit Graph

7788 Commits

Author SHA1 Message Date
Harmen Stoppels
a45d09abcd
Spec to string: show %compiler at the end (#49439)
In Spack v1.0 we plan to parse caret ^ and percent % the same. Their meaning is direct and transitive dependency respectively. It means that variants, versions, arch, platform, os, target and dag hash should go before the %, so that they apply to dependent not the %dependency.
2025-03-12 18:15:34 +01:00
Harmen Stoppels
db7ab9826d
spec_parser: check next_token if not expecting next token (#49408) 2025-03-12 08:39:23 +01:00
Harmen Stoppels
9f69d9b286
get_mark_from_yaml_data: move to spack.util.spack_yaml (#49409) 2025-03-12 08:36:14 +01:00
Massimiliano Culpo
d352b71df0
Error when an anonymous spec is required for a virtual package (#49385)
When requiring a constraint on a virtual package, it makes little
sense to use anonymous specs, and our documentation shows no example
of requirements on virtual packages starting with `^`.

Right now, due to how `^` is implemented in the solver, writing:
```yaml
mpi:
  require: "^openmpi"
```
is equivalent to the more correct form:
```yaml
mpi:
  require: "openmpi"
```
but the situation will change when `%` will shift its meaning to be a
direct dependency.

To avoid later errors that are both unclear, and quite slow to get to the user,
this commit makes anonymous specs under virtual requirements an error,
and shows a clear error message pointing to the file and line where the
spec needs to be changed.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-03-12 08:33:42 +01:00
psakievich
7d79648cb5
build_environment.py: fix external module loading (#49401)
* load external modules in topo order from leaf to root
* only load external modules of transitive link/run deps
2025-03-11 14:05:26 +01:00
Peter Scheibel
75e37c6db5
use default modify scope if no scope contains key (#48777)
If you use `spack config change` to modify a `require:` section that did
not exist before, Spack was inserting the merged configuration into the
highest modification scope (which for example would clutter the
environment's `spack.yaml` with a bunch of configuration details 
from the defaults).
2025-03-09 21:31:56 -07:00
Tamara Dahlgren
3f8dcfc6ed
Support independent includes with conditional, optional, and remote entries (#48784)
Supersedes #46792.
Closes #40018.
Closes #31026.
Closes #2700.

There were a number of feature requests for os-specific config. This enables os-specific
config without adding a lot of special sub-scopes.

Support `include:` as an independent configuration schema, allowing users to include
configuration scopes from files or directories. Includes can be:
* conditional (similar to definitions in environments), and/or
* optional (i.e., the include will be skipped if it does not exist).

Includes can be paths or URLs (`ftp`, `https`, `http` or `file`). Paths can be absolute or
relative . Environments can include configuration files using the same schema. Remote includes 
must be checked by `sha256`.

Includes can also be recursive, and this modifies the config system accordingly so that
we push included configuration scopes on the stack *before* their including scopes, and
we remove configuration scopes from the stack when their including scopes are removed.

For example, you could have an `include.yaml` file (e.g., under `$HOME/.spack`) to specify
global includes:

```
include:
- ./enable_debug.yaml
- path: https://github.com/spack/spack-configs/blob/main/NREL/configs/mac/config.yaml
  sha256: 37f982915b03de18cc4e722c42c5267bf04e46b6a6d6e0ef3a67871fcb1d258b
```

Or an environment `spack.yaml`:

```
spack:
  include:
  - path: "/path/to/a/config-dir-or-file"
    when: os == "ventura"
  - ./path/relative/to/containing/file/that/is/required
  - path: "/path/with/spack/variables/$os/$target"
    optional: true
  - path: https://raw.githubusercontent.com/spack/spack-configs/refs/heads/main/path/to/required/raw/config.yaml
    sha256: 26e871804a92cd07bb3d611b31b4156ae93d35b6a6d6e0ef3a67871fcb1d258b
```

Updated TODO:
- [x] Get existing unit tests to pass with Todd's changes
- [x] Resolve new (or old) circular imports
- [x] Ensure remote includes (global) work
- [x] Ensure remote includes for environments work (note: caches remote
      files under user cache root)
- [x] add sha256 field to include paths, validate, and require for remote includes
- [x] add sha256 remote file unit tests
- [x] revisit how diamond includes should work
- [x] support recursive includes
- [x] add recursive include unit tests
- [x] update docs and unit test to indicate ordering of recursive includes with
      conflicting options is deferred to follow-on work

---------

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Peter Scheibel <scheibel1@llnl.gov>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2025-03-09 19:33:44 -07:00
Harmen Stoppels
fd62f0f3a8
repo create: set api: vX.Y (#49344) 2025-03-07 08:34:55 +01:00
Harmen Stoppels
125feb125c
Define Package API version (#49274)
Defines `spack.package_api_version` and `spack.min_package_api_version` 
as tuples (major, minor). 

This defines resp. the current Package API version implemented by this version 
of Spack and the minimal Package API version it is backwards compatible with.

Repositories can optionally define:
```yaml
repo:
    namespace: my_repo
    api: v1.2
```
which indicates they are compatible with versions of Spack that implement 
Package API `>= 1.2` and `< 2.0`. When the `api` key is omitted, the default 
`v1.0` is assumed.
2025-03-05 15:42:48 +01:00
fbrechin
e2293c758f
Adding ability for repo paths from a manifest file to be expanded when creating an environment. (#49084)
* Adding ability for repo paths from a manifest file to be expanded when creating an environment.

A unit test was added to check that an environment variable will be expanded.
Also, a bug was fixed in the expansion of develop paths where if an environment variable
was in the path that then produced an absolute path the path would not be extended.

* Fixing new unit test for env repo var substitution

* Adding ability for repo paths from a manifest file to be expanded when creating an environment.

A unit test was added to check that an environment variable will be expanded.
Also, a bug was fixed in the expansion of develop paths where if an environment variable
was in the path that then produced an absolute path the path would not be extended.

* Messed up resolving last rebase
2025-03-04 09:52:28 -08:00
Massimiliano Culpo
bc04d963e5
Remove debug print statements in unit-tests (#49280)
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-03-04 18:29:45 +01:00
dependabot[bot]
8cfffd88fa
build(deps): bump pytest from 8.3.4 to 8.3.5 in /lib/spack/docs (#49268)
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.3.4 to 8.3.5.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](https://github.com/pytest-dev/pytest/compare/8.3.4...8.3.5)

---
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- dependency-name: pytest
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2025-03-03 19:18:42 -06:00
dependabot[bot]
2f8dcb8097
build(deps): bump python-levenshtein in /lib/spack/docs (#49269)
Bumps [python-levenshtein](https://github.com/rapidfuzz/python-Levenshtein) from 0.26.1 to 0.27.1.
- [Release notes](https://github.com/rapidfuzz/python-Levenshtein/releases)
- [Changelog](https://github.com/rapidfuzz/python-Levenshtein/blob/main/HISTORY.md)
- [Commits](https://github.com/rapidfuzz/python-Levenshtein/compare/v0.26.1...v0.27.1)

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- dependency-name: python-levenshtein
  dependency-type: direct:production
  update-type: version-update:semver-minor
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2025-03-03 19:17:48 -06:00
dependabot[bot]
5b70fa8cc8
build(deps): bump sphinx from 8.2.1 to 8.2.3 in /lib/spack/docs (#49270)
Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 8.2.1 to 8.2.3.
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst)
- [Commits](https://github.com/sphinx-doc/sphinx/compare/v8.2.1...v8.2.3)

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- dependency-name: sphinx
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2025-03-03 19:17:08 -06:00
dependabot[bot]
ccca0d3354
build(deps): bump isort from 6.0.0 to 6.0.1 in /lib/spack/docs (#49213)
Bumps [isort](https://github.com/PyCQA/isort) from 6.0.0 to 6.0.1.
- [Release notes](https://github.com/PyCQA/isort/releases)
- [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md)
- [Commits](https://github.com/PyCQA/isort/compare/6.0.0...6.0.1)

---
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- dependency-name: isort
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2025-03-01 08:17:39 -07:00
Harmen Stoppels
8e7489bc17
Revert "Honor cmake_prefix_paths property if available (#42569)" (#49237)
This reverts commit fe171a560b.
2025-02-28 23:33:02 +01:00
John W. Parent
d234df62d7
Solver: Cache Concretization Results (#48198)
Concretizer caching for reusing solver results
2025-02-28 12:42:00 -06:00
John W. Parent
5bd184aaaf
Windows Rpath: Allow package test rpaths (#47072)
On Windows, libraries search their directory for dependencies, and
we help libraries in Spack-built packages locate their dependencies
by symlinking them into the dependent's directory (we refer to this
as simulated RPATHing).

We extend the convenience functionality here to support base library
directories outside of the package prefix: this is primarily for
running tests in the build directory (which is not located inside
of the final install prefix chosen by spack).
2025-02-27 19:16:00 -08:00
Kyle Knoepfel
fe171a560b
Honor cmake_prefix_paths property if available (#42569)
* Honor package-specified cmake_prefix_paths at runtime

* Add paths in the correct order and prune duplicates

* Normalize paths for windows' sake
2025-02-27 11:11:22 -07:00
Harmen Stoppels
7363047b82
schema: additionalKeysAreSpecs (#49221)
Currently we validate all keys as specs, but it's meant to validate only additional keys in all cases.
2025-02-27 12:17:25 +01:00
Harmen Stoppels
5da4f18188
schema/modules.py: remove lmod props from tcl schema (#49220) 2025-02-27 10:48:22 +01:00
Massimiliano Culpo
3caa3132aa
python: allow it as a build-tool again (#49201)
Python was removed from being a build tool in #46980, due to issues
when reusing specs. This PR adds a new rule to match the interpreter
among different Python packages, in clingo.

It also adds a bunch of new "build-tools", so that specs like:
```
py-matplotlib backend=tkagg
```
can be concretized in one go.

Modifications:
- [x] Make `py-matplotlib backend=tkagg` concretizable
- [x] Add unit-tests to ensure situations like in #46980 do not happen

---------

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-26 15:04:31 -08:00
Massimiliano Culpo
dbd531112c
Assign priorities to configuration scopes (take 2) (#49187)
Currently, the custom config scopes are pushed at the top when constructing
configuration, and are demoted whenever a context manager activating an
environment is used - see #48414 for details. Workflows that rely on the order
in the [docs](https://spack.readthedocs.io/en/latest/configuration.html#custom-scopes)
are thus fragile, and may break

This PR allows to assign priorities to scopes, and ensures that scopes of lower priorities
are always "below" scopes of higher priorities. When scopes have the same priority,
what matters is the insertion order.

Modifications:
- [x] Add a mapping that iterates over keys according to priorities set when
      adding the key/value pair
- [x] Use that mapping to allow assigning priorities to configuration scopes
- [x] Assign different priorities for different kind of scopes, to fix a bug, and
      add a regression test
- [x] Simplify `Configuration` constructor
- [x] Remove `Configuration.pop_scope`

---------

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-26 10:52:19 -08:00
psakievich
ae5e121502
Preserve --lines (#49194)
This does not propagate in parsing. Open to other ideas.
2025-02-26 17:48:01 +00:00
Massimiliano Culpo
9e508b0321
Revert "Assign priorities to configuration scopes (#48420)" (#49185)
All the build jobs in pipelines are apparently relying on the bug that was fixed.

The issue was not caught in the PR because generation jobs were fine, and
there was nothing to rebuild.

Reverting to fix pipelines in a new PR.

This reverts commit 3ad99d75f9.
2025-02-25 02:33:41 -08:00
dependabot[bot]
1cc63e2b7c
build(deps): bump sphinx from 8.2.0 to 8.2.1 in /lib/spack/docs (#49180)
Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 8.2.0 to 8.2.1.
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/v8.2.1/CHANGES.rst)
- [Commits](https://github.com/sphinx-doc/sphinx/compare/v8.2.0...v8.2.1)

---
updated-dependencies:
- dependency-name: sphinx
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2025-02-25 02:33:03 -07:00
Harmen Stoppels
4e311a22d0
spec.py: remove VariantMap.concrete (#49170)
VariantMap.concrete is unused, and would be incorrect if it were used
due to conditional variants.

Just let the Spec dictate what is concrete and what is not.
2025-02-25 10:18:06 +01:00
Massimiliano Culpo
3ad99d75f9
Assign priorities to configuration scopes (#48420)
Currently, environments can end up with higher priority than `-C` custom
config scopes and `-c` command line arguments sometimes. This shouldn't
happen -- those explicit CLI scopes should override active environments.

Up to now configuration behaved like a stack, where scopes could be only be
pushed at the top. This PR allows to assign priorities to scopes, and ensures
that scopes of lower priorities are always "below" scopes of higher priorities.

When scopes have the same priority, what matters is the insertion order.

Modifications:
- [x] Add a mapping that iterates over keys according to priorities set when
      adding the key/value pair
- [x] Use that mapping to allow assigning priorities to configuration scopes
- [x] Assign different priorities for different kind of scopes, to fix a bug, and
      add a regression test
- [x] Simplify `Configuration` constructor
- [x] Remove `Configuration.pop_scope`
- [x] Remove `unify:false` from custom `-C` scope in pipelines

On the last modification: on `develop`, pipelines are relying on the environment
being able to override `-C` scopes, which is a bug. After this fix, we need to be
explicit about the unification strategy in each stack, and remove the blanket
`unify:false` from the highest priority scope

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-25 00:58:16 -08:00
Harmen Stoppels
e783a2851d
Revert "Repo.packages_with_tags: do not construct a set of all packages (#49141)" (#49172)
This reverts commit 0da5bafaf2.
2025-02-24 16:46:41 +01:00
Harmen Stoppels
4e7a5e9362
spack verify libraries: verify dependencies of installed packages can be resolved (#49124)
Currently, we have `config:shared_linking:missing_library_policy` to error
or warn when shared libraries cannot be resolved upon install.

The new `spack verify libraries` command allows users to run this post
install hook at any point in time to check whether their current
installations can resolve shared libs in rpaths.
2025-02-24 11:28:06 +01:00
Harmen Stoppels
974abc8067
Add typehints for directory_layout / Spec.prefix (#48652) 2025-02-24 09:47:07 +00:00
Massimiliano Culpo
2f9ad5f34d
spec.py: fix virtual reconstruction for old specs (#49103)
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2025-02-24 01:23:37 -07:00
Harmen Stoppels
6cd74efa90
Spec.ensure_external_path_if_external, Spec.inject_patches_variant -> spack.solver.asp (#48988)
y
2025-02-24 08:36:23 +01:00
ByteHamster
b304a2d854
Fix installing rust@nightly (#49098)
Installing `rust@nightly` fails because the package file declares a conflict of rust versions older than `:1.64` with `gcc>=13`. However, because `nightly` is alphanumerically smaller than any actual version number, `nightly` is incorrectly detected to have a conflict with `gcc>=13` as well. Marking `nightly` as an infinity version instead solves this.
2025-02-21 09:53:46 -08:00
Ryan Krattiger
1fa1864b37
Reproducer should deduce artifact root from concrete environment (#45281)
* Reproducer should decude artifact root from concrete environment

* Add documentation on the layout of the artifacts directory

* Use dag hash in the container name

* Add reproducer options to improve local testing

* --use-local-head allows running reproducer with
  the current Spack HEAD commit rather than computing
  a commit for the reproducer

* Add test to verify commits and recreating reproduction environment

* Add test for non-merge commit case

* ci reproduce-build: Drop overwrite option
in favor of throwing an error if the working dir is non-empty
2025-02-21 10:46:43 -06:00
Harmen Stoppels
0da5bafaf2
Repo.packages_with_tags: do not construct a set of all packages (#49141) 2025-02-21 16:23:42 +01:00
Harmen Stoppels
b8ec69112f
Extracted changes from 45189 (#49137)
Co-Authored-By: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-21 10:58:00 +01:00
Massimiliano Culpo
a3645fd372
Make BaseConfiguration pickleable (#47545)
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-21 09:54:22 +01:00
dependabot[bot]
9bcd86071f
build(deps): bump sphinx from 8.1.3 to 8.2.0 in /lib/spack/docs (#49118)
Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 8.1.3 to 8.2.0.
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst)
- [Commits](https://github.com/sphinx-doc/sphinx/compare/v8.1.3...v8.2.0)

---
updated-dependencies:
- dependency-name: sphinx
  dependency-type: direct:production
  update-type: version-update:semver-minor
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2025-02-20 16:42:00 -08:00
Harmen Stoppels
3e8cb852b0
spec.py: use json.dumps directly to avoid hash breakage (#48884) 2025-02-20 17:39:07 +01:00
Wouter Deconinck
f9e4d3898a
cargo: avoid need to use super().build_args with std_build_args (#49071)
* cargo: avoid need to use super().build_args with std_build_args

* cargo: fix style

* jujutsu: avoid need for super().build_args
2025-02-19 09:01:56 -08:00
Harmen Stoppels
c97be2a9d7
checksum.py tests: extract add_versions_to_pkg fixture (#49100) 2025-02-19 07:33:50 +00:00
Harmen Stoppels
97d66b637f
Fix tests modifying package.py files (#49093) 2025-02-18 13:28:07 +01:00
Harmen Stoppels
e4a8d45d86
views: resolve symlinked dir - dir conflict when same file (#49039)
A directory and a symlink to it under the same relative path in a
different prefix

```
/prefix1/dir/
/prefix1/dir/file
/prefix2/dir -> /prefix1/dir/
```

are not a blocker to create a view. The view structure simply looks like
this:

```
/view/dir/
/view/dir/file
```

This should be the case independently of the order in which we visit
prefixes, so we could in principle create views order independently.
2025-02-18 06:53:17 +01:00
Harmen Stoppels
2e372c53ab
spec.py: remove Spec.virtual_dependencies (#49079) 2025-02-18 06:17:55 +01:00
dependabot[bot]
a9da160160
build(deps): bump flake8 from 7.1.1 to 7.1.2 in /lib/spack/docs (#49087)
Bumps [flake8](https://github.com/pycqa/flake8) from 7.1.1 to 7.1.2.
- [Commits](https://github.com/pycqa/flake8/compare/7.1.1...7.1.2)

---
updated-dependencies:
- dependency-name: flake8
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2025-02-17 20:08:05 -07:00
Harmen Stoppels
545750873e
Spec.__contains__: restrict to direct build and transitive runtime deps (#49072)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-17 13:57:16 +01:00
dependabot[bot]
7d4523a9fc
build(deps): bump isort from 5.13.2 to 6.0.0 in /lib/spack/docs (#48747)
Bumps [isort](https://github.com/pycqa/isort) from 5.13.2 to 6.0.0.
- [Release notes](https://github.com/pycqa/isort/releases)
- [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md)
- [Commits](https://github.com/pycqa/isort/compare/5.13.2...6.0.0)

---
updated-dependencies:
- dependency-name: isort
  dependency-type: direct:production
  update-type: version-update:semver-major
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2025-02-17 12:05:41 +01:00
Harmen Stoppels
754a64d1fe
apply black v25.1.0 (#49076) 2025-02-17 11:42:12 +01:00
dependabot[bot]
2b52639032
build(deps): bump black from 24.10.0 to 25.1.0 in /lib/spack/docs (#48780)
Bumps [black](https://github.com/psf/black) from 24.10.0 to 25.1.0.
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](https://github.com/psf/black/compare/24.10.0...25.1.0)

---
updated-dependencies:
- dependency-name: black
  dependency-type: direct:production
  update-type: version-update:semver-major
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2025-02-16 16:37:36 -07:00
Massimiliano Culpo
ccd205bfeb
Allow tuning max_dupes for build dependencies (#48948)
Up to now, Spack was allowing all build-tools that
may appear in the DAG to have 2 max_dupes.

This is not needed in practice for most of them,
and adding them out of caution just increases
grounding and concretization time.

This PR makes the value of max_dupes configurable
per package, and sets only a few known packages to
2 max_dupes by default.

In case user needs different values, they can
tune the configuration for their use case.
2025-02-14 14:25:12 +01:00
Paul Gessinger
114bd5744f
views: normalize paths on case insensitive file systems (#47370)
On macOS, prefix_a/file and prefix_b/FILE map to the same file view/file or view/FILE.

This commit ensures that we test whether a view is created on a case insensitive filesystem and handle projection conflicts accordingly.
2025-02-14 09:35:40 +01:00
Harmen Stoppels
8ef5f1027a
Spec.__getitem__: restrict to direct deps + transitive runtime deps (#49016)
With this change spec["pkg"] searches only direct dependencies and transitive link/run
dependencies, ordered by depth. This avoids situations where we pick up unwanted 
deps of build/test deps. 

To reach those, you need to do spec["build_dep"]["pkg"] explicitly.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-02-14 08:45:50 +01:00
Wouter Deconinck
36bc53ee07
MesonPackage: depends_on pkgconfig (#46955)
meson's `dependency` function often uses pkg-config to locate a dependency, and may even fall back to cmake. The former case is very common, and since packagers often forget to add the tiny pkgconfig package as a build dep, we do it for them.
2025-02-14 08:36:16 +01:00
Tamara Dahlgren
236b8fc009
RepoSplit/tests: update repo tests relying on builtin package repo to only use mock repos (#48926)
* RepoSplit/tests: update repo tests relying on builtin

* test_repo_last_mtime: skip on windows due to mtime issues in CI
2025-02-13 21:49:50 -08:00
Harmen Stoppels
a7b542dd37
spack debug create-db-tarball: remove after test failures (#49025) 2025-02-13 13:10:28 +01:00
John W. Parent
fd59d3e589
Ci: ensure file path comparsion uses posix paths (#47033)
Git always produces posix paths, ensure we're always comparsing apples to apples by normalizing paths compared to git output to posix.
2025-02-12 12:14:16 -07:00
Massimiliano Culpo
0172208c52
solver: add type-hints to OutputConfiguration (#48979) 2025-02-12 20:12:12 +01:00
Harmen Stoppels
a137da1cd5
Spec.validate_detection -> spack.detection.path.validate_detection (#48987) 2025-02-12 09:30:14 -07:00
Harmen Stoppels
03e972314f
Remove spack.repo.PATH.is_virtual call from SpecBuildInterface.(#48984)
This PR is effectively a breaking change extracted from #45189, which removes 
support for spec["mpi"] if spec itself is openmpi / mpich that could provide mpi; 
from the Spec instance we don't have any parent it provides it to, 
hence it's a KeyError.
2025-02-12 17:17:45 +01:00
Harmen Stoppels
76f00a3659
Spec.is_virtual -> spack.repo.PATH.is_virtual (#48986) 2025-02-12 16:57:27 +01:00
Harmen Stoppels
cd98781fb4
concretize.lp: don't warn about deprecation when external (#49008) 2025-02-12 16:27:37 +01:00
Harmen Stoppels
9747978c7f
Spec.package_class -> spack.repo.PATH.get_pkg_class (#48985) 2025-02-12 11:52:04 +01:00
Harmen Stoppels
fb9d6427e6
package_hash.py: move metadata_attrs inline out of package_base (#48981) 2025-02-12 10:38:35 +01:00
Harmen Stoppels
18cd922aab
style.py: fix false negative in redundant import statements (#48980) 2025-02-11 19:30:50 +01:00
Massimiliano Culpo
5518ad9611
Fix performance issue on macOS (#48997)
archspec.cpu.host() is not memoized, so compute
it as less as possible.

---------

Co-authored-by: alalazo <alalazo@users.noreply.github.com>
2025-02-11 18:54:32 +01:00
Harmen Stoppels
3909308d5c
spack.util.elf: catch seek errors (#48972) 2025-02-11 08:52:52 +01:00
Massimiliano Culpo
54210270c8
concretizer: reduce search space with static analysis (#48729)
Currently, when we setup the ASP problem for `clingo`, we don't take into account the configuration. This results in setting up ASP problems that are larger than necessary, with possibly redundant information, and higher concretization times. 

This PR tries to improve things by adding an opt-in feature that computes the _possible dependencies_ of a solve taking also into account the current configuration, and avoids adding possible dependencies that we are certain can't be in the final solution.

The feature can be activated with:
```yaml
concretizer:
  static_analysis: true
```

Examples of simple rules to discard dependencies are:
- Dependencies that are not buildable, and for which no binary is present (e.g. `cray-mpich` etc. on non Cray systems)
- Dependencies that are not for the current platform (e.g. `msmpi` on non Windows platforms)
- Conditional dependencies that cannot be activated, because of some user requirement (e.g. `cuda` etc. if the user requires `~cuda` in configuration)
- Virtual providers that cannot be used, because of a requirement on a virtual

The speed-up these rules seem to give depends on the use case at hand, but if the configuration is updated properly, they are noticeable. 

Since in cases where there is no rule to exclude packages upfront, reuse is active, and this option is activated, it's possible to see some minor slow down, the feature has been added as opt-in, so it's turned off by default.
2025-02-11 08:44:20 +01:00
Harmen Stoppels
6d608a9664
log.py: remove setenv calls (#48933) 2025-02-10 09:53:36 +01:00
Harmen Stoppels
afe7d6c39e
package_base.py: remove use_cray_compiler_names (#48932) 2025-02-07 12:47:17 +01:00
psakievich
1f428c4188
Add a message for CMake incremental build (#48905)
* Add a message for CMake incremental build

Requested message to explain CMake phase is getting skipped.

* [@spackbot] updating style on behalf of psakievich

* Update import

---------

Co-authored-by: psakievich <psakievich@users.noreply.github.com>
2025-02-07 01:32:06 +00:00
Harmen Stoppels
1c93fef160
spec.py: ensure == is false if true modulo precomputed dag hash (#48889) 2025-02-06 09:55:27 +01:00
Harmen Stoppels
e0e6f29584
relocate.py: don't warn about symlinks (#48904)
`relocate_links` warns when the target is absolute and not matched by
any prefix from the prefix to prefix map.

This can lead to false positives, cause the prefix to prefix map does
not contain trivial/identity entries whenever a package is installed to
its original location.

Since relocate_links is the odd one out there (we don't warn about
similar issues with rpaths, etc), just remove the warning.
2025-02-05 12:33:44 -07:00
Harmen Stoppels
4487598d60
spec.py: ensure spec.extra_attributes is {} if is null in json (#48896) 2025-02-05 17:55:53 +01:00
Harmen Stoppels
fbb688af07
spec.py: fix hash change due to None vs {} (#48854)
* Fix hash change due to None vs {}

* Enforce null for empty list of external_modules
2025-02-05 09:48:00 +01:00
psakievich
b7f556e4b4
Remove variable from cmake.py (#48824)
* Remove variable from cmake.py

#48775 left a dangling variable that was not caught in CI but by the eyes of @haampie. Restructure variable to local method.

* [@spackbot] updating style on behalf of psakievich

* Update cmake.py

* Update lib/spack/spack/build_systems/cmake.py

* Update lib/spack/spack/build_systems/cmake.py

---------

Co-authored-by: psakievich <psakievich@users.noreply.github.com>
2025-02-04 15:20:15 +01:00
Todd Gamblin
71d1901831
update pyproject.toml for ruff format (#48823)
Add ruff configuration to `pyproject.toml`.

This allows `ruff format` in the Spack repository to format all the files we care about, 
with our line length of 99, the exceptions we already put in place, and excluding things
we don't auto-format, like vendored dependencies.

Right now it'll reformat 175 or so files, but only slightly, in places where `ruff` differs from
`black`. For the most part I like the ruff format decisions better than `black`, but none of
the changes seem too severe.

This does not change `spack style` -- I figure that can come later but this at least will
let people start playing with `ruff`.

---------

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2025-02-03 20:56:05 -08:00
Harmen Stoppels
a8f5289801
cdash: avoid build_opener (#48846) 2025-02-03 18:41:40 +01:00
Harmen Stoppels
ac635aa777
packge_base.py: remove _patches_by_hash (#48768) 2025-02-03 16:17:42 +01:00
pauleonix
8579efcadf
cuda: add v12.8 (#48708) 2025-02-03 13:49:30 +01:00
Harmen Stoppels
a6c9b55fad
Set version to v1.0.0.dev0 (#48791) 2025-02-03 01:42:32 -08:00
Todd Gamblin
608ed967e1
style: fix not in and is not (#48831)
These are some changes that `ruff check --fix` would make that the current
`spack style` also agrees with.  Make the changes now so that the `ruff`
change is less disruptive.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2025-02-03 00:49:38 -08:00
Todd Gamblin
742eaa32b7
spack_yaml: use unambiguous variable name (#48832) 2025-02-03 09:07:39 +01:00
Till Ehrengruber
392a58e9be
oci/opener.py: respect system proxy settings (#48783) 2025-02-01 09:26:55 +01:00
Greg Becker
bb35a98079
env create: create copies of relative include files in envs created from manifest (#48689)
Currently, environments created from manifest files with relative includes result in broken
references to config files.

This PR modifies `spack env create` to create local copies in the new environment of any local
config files from relative paths in the environment manifest passed as an init file.

This PR does not change the behavior if the include is an absolute path or if the include is from
a relative path outside the environment directory, but it does warn about missing relative includes if
they are inside the environment directory.

Includes regression test and short blurb in docs.
2025-02-01 01:41:18 +00:00
psakievich
759518182c
Bug Fix: Better incremental check for CMake (#48775)
* Bug Fix: Better incremental check for CMake

* Fix syntax error

* Ensure match of config artifact with generator
2025-01-31 08:48:41 -06:00
Harmen Stoppels
6b13017ded
Remove unused values (#48795)
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2025-01-31 08:21:44 +01:00
Harmen Stoppels
2c51b5853f
spack.package: re-export EnvironmentModifications / Prefix (#48792) 2025-01-31 08:20:15 +01:00
Harmen Stoppels
d0cbd056a8
spack.package: wrap llnl.util.tty (#48793)
avoid import of llnl.util.tty in packages
2025-01-31 08:17:29 +01:00
Harmen Stoppels
b02dcf697d
Move from python2 compliant IOError and EnvironmentError to python3-only OSError (#48764)
* IOError -> OSError

* also do EnvironmentError
2025-01-30 09:32:57 -08:00
Tamara Dahlgren
2da8a1d1e3
Docs/bugfix: correct return for Adding flags to configure (#48434) 2025-01-29 13:04:22 -08:00
Massimiliano Culpo
3d82e5c573
Remove pipelines and images based on ppc64le (#48767) 2025-01-29 16:36:25 +01:00
Harmen Stoppels
92260b179d
package api: drop wildcard re-export (#48760)
* package api: drop wildcard re-export

To ensure package repos are forward/backward compatibility with Spack,
we should explicitly export all symbols we want to expose in the public
package API, and drop `from spack.something import *` because
removal/addition to the public API will go unnoticed.

Also `llnl.util.filesystem` has some methods that shouldn't be exposed
in the package API, so better to enumerate a subset explicitly.

* remove flatten_dependencies / install_dependency_symlinks
2025-01-29 15:00:39 +01:00
Massimiliano Culpo
196c912b8a
Deprecate frontend/backend os/target (#47756) 2025-01-29 13:22:51 +01:00
Massimiliano Culpo
40a1da4a73
spec.py: fix ArchSpec.intersects (#48741)
fixes a bug where `x86_64:` and `ppc64le:` intersected, and x86_64: and :haswell did not.
2025-01-28 16:46:09 +01:00
Harmen Stoppels
c054cb818d
import os.path -> os (#48709) 2025-01-28 09:45:43 +01:00
Dom Heinzeller
22ba366e85
Fix creating a bootstrap mirrors (#48252)
Regressed in #47126 

Spack was not interpreting mirrors using relative path with respect to the
metadata directory.

---------

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-27 22:37:29 +00:00
Massimiliano Culpo
13558269b5
Fix a few minor issues in tests (#48735)
* test_no_matching_compiler_specs: does not need mock_low_high_config,
  since mutable_config is already used at class level
* bindist.py: setup a configuration that doesn't super-impose builtin.mock
  over builtin
* builder.py: use a mock configuration for the tests
2025-01-27 23:36:27 +01:00
Joe
c764400338
Allowing environment variables to be set in a spack.yaml (#47587)
This adds a new configuration section called `env_vars:` that can be set in an environment.

It looks very similar to the existing `environment:` section that can be added to `modules.yaml`,
but it is global for an entire spack environment. It's called `env_vars:` to deconflate it with spack
environments (the term was too overloaded).

The syntax looks like this:

```yaml
spack:
  specs:
    - cmake%gcc
  env_vars:
    set:
      ENVAR_SET_IN_ENV_LOAD: "True"
```

Any of our standard environment modifications can be added to the `env_vars` section, e.g.
`prepend_path:`, `unset:`, `append_path:`, etc.  Operations in `env_vars:` are performed
on `spack env activate` and undone on `spack env deactivate`.
2025-01-27 12:20:22 -08:00
Alec Scott
ebc9f03dda
Go build system: reduce resulting installation sizes (#47943)
* Reduce the size of outputted go built binaries
* Remove unused import from go package
* go: remove comment from setup dependents build env
* Add back missing imports after rebase
2025-01-27 11:32:56 -08:00
Alec Scott
8ac0bd2825
GoPackage: respect -j concurrency (#48421) 2025-01-27 12:58:29 -05:00
Tara Drwenski
cc9e0137df
Initialize deque with path string (#48734) 2025-01-27 17:42:29 +01:00
Harmen Stoppels
c6202842ed
Improve error handling in urlopen / socket read (#48707)
* Backward compat with Python 3.9 for socket.timeout
* Forward compat with Python [unknown] as HTTPResponse.geturl is deprecated
* Catch timeout etc from .read()
* Some minor simplifications: json.load(...) takes file object in binary mode.
* Fix CDash code which does error handling wrong: non-2XX responses raise.
2025-01-27 16:59:05 +01:00
Greg Becker
0ec00a9c9a
rewiring.py: eliminate code duplication from bindist (#48723) 2025-01-27 10:09:04 +01:00
psakievich
5e3020ad02
filesystem.py: fix recursive_mtime_greater_than (#48718) 2025-01-26 08:29:29 +01:00
Harmen Stoppels
25a3e8ba59
Remove unused Tokenizer.full_match (#48650) 2025-01-24 15:53:42 +01:00
Juan Miguel Carceller
f95e27a159
SIPPackage: add gmake as a build dependency to be able to build py-pyqt5 (#48660) 2025-01-23 15:51:59 +01:00
Massimiliano Culpo
2db654bf5a
Define the DB index file name in a single place (#48681) 2025-01-23 12:17:34 +01:00
Harmen Stoppels
9992b563db
Improve spack.build_systems typing (#48590) 2025-01-23 12:15:43 +01:00
Harmen Stoppels
daba1a805e
build_environment.py: clear CONFIG_SITE for configure scripts (#48690)
Should be sufficient to set CONFIG_SITE to /dev/null before running configure to 
prevent any config site file to be loaded, which currently causes non-determinism in builds.

Setting the variable CONFIG_SITE prevents configure files to check $prefix/share/config.site, 
$prefix/etc/config.site, $ac_default_prefix/share/config.site, $ac_default_prefix/etc/config.site 
so we don't have to patch a block of code.
2025-01-23 11:45:52 +01:00
Tara Drwenski
518572e710
Use gcc toolchain when using hip and gcc host compiler (#48632) 2025-01-22 23:37:24 -08:00
jnhealy2
aba0a740c2
Address quoting issue impacting dev_paths containing @ symbols (#48555)
* Address quoting issue that casuses dev_paths containing @ symbols to parse as versions

* Fix additional location were dev_path was imporperly constructed

The dev_path must be quoted to avoid parsing issues when
paths contain '@' symbols. Also add tests to catch
regression of this behavior

* Format to fix line length

* fix failing tests

* Fix whitespace error

* Add binary_compatibility fixture to test

* Change string formatting to avoid multiline f string

* Update lib/spack/spack/test/concretization/core.py

* Add tmate debug session

* Revert "Add tmate debug session"

This reverts commit 24e2f77e3c.

* Move test and refactor to use env methods

* Update lib/spack/spack/test/cmd/develop.py

---------

Co-authored-by: psakievich <psakiev@sandia.gov>
2025-01-22 18:03:13 +01:00
Harmen Stoppels
0fe8e763c3
bootstrap: do not show disabled sources as errors if enabled sources fail (#48676) 2025-01-22 17:02:23 +01:00
Harmen Stoppels
0e2d261b7e
bootstrap/status.py: remove make (#48677) 2025-01-22 17:00:25 +01:00
Harmen Stoppels
87a83db623
autotools.py: set lt_cv_apple_cc_single_mod=yes (#48671)
Since macOS 15 `ld -single_module` warns with a deprecation message,
which makes configure scripts believe the flag is unsupported. That
in turn triggers a code path where `archive_cmds` is set to

```
$CC -r -keep_private_externs -nostdlib ... -dynamiclib
```

instead of just

```
$CC -dynamiclib ...
```

This code path was meant to trigger only on ancient macOS <= 14.4 where
libtool had to add `-single_module`, which is the default since macos
14.4, and is now apparently deprecated because the flag is a no-op for
more than 15 years.

The wrong `archive_cmds` causes actual problems combined with a bug in
OpenMPI's compiler wrapper (`CC=mpicc`), which appends `-rpath` flags,
which cause an error when combined with the `-r` flag added by the
autotools.

Spack's compiler wrapper doesn't do this, but it's likely there are
other compiler wrappers out there that are not aware that `-r` and
`-rpath` cannot be combined.

The fix is to change defaults: `lt_cv_apple_cc_single_mod=yes`.
2025-01-22 11:29:50 +01:00
Harmen Stoppels
70df460fa7
PackageBase.detect_dev_src_change: speed up (#48618) 2025-01-21 16:48:37 +01:00
Harmen Stoppels
31a1b2fd6c
relocate.py, binary_distribution.py: cleanup (#48651) 2025-01-21 15:45:08 +01:00
Harmen Stoppels
ecd14f0ad9
archive.py: fix include_parent_directories=True with path_to_name (#48570) 2025-01-20 10:21:32 +01:00
Massimiliano Culpo
783eccfbd5
jsonschema: use draft7 validator and simplify schemas (#48621) 2025-01-20 09:51:29 +01:00
Harmen Stoppels
7e41288ca6
spack_yaml.py / spec.py: use dict instead of OrderedDict (#48616)
* for config: let `syaml_dict` inherit from `dict` instead of `OrderedDict`. `syaml_dict` now only exists as a mutable wrapper for yaml related metadata.
* for spec serialization / hashing: use `dict` directly

This is possible since we only support cpython 3.6+ in which dicts are ordered.

This improves performance of hash computation a bit. For a larger spec I'm getting 9.22ms instead of 11.9ms, so 22.5% reduction in runtime.
2025-01-20 17:33:44 +09:00
Tara Drwenski
3bb375a47f
Change llvm-amdgpu to a build dependency of rocm (#48612) 2025-01-20 17:28:15 +09:00
Harmen Stoppels
962498095d
compat with mypy 1.14 (#48626)
* OSError.errno apparently is int | None, but already part of __str__ anyway so drop

* fix disambiguate_spec_from_hashes

* List[Spec].sort() complains, ignore it

* fix typing of KnownCompiler, and use it in asp.py
2025-01-18 21:16:05 +01:00
John Gouwar
9f7cff1780
Stable splice-topo order for resolving splicing (#48605)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-17 16:27:16 +01:00
Harmen Stoppels
bb43fa5444
spec.py: make hashing of extra_attributes order independent (#48615) 2025-01-17 13:50:36 +01:00
Massimiliano Culpo
59a71959e7
Fix wrong hash in spliced specs, and improve unit-tests (#48574)
Modifications:
* Fix a severe bug where a spliced spec has the same hash as the original build spec
* Removed CacheManager in favor of install_mockery. The latter sets up a temporary store, and removes it at the end 
   of the test.
* Deleted a couple of helper functions e.g. _has_dependencies
* Checked that SolverException is raised, rather than Exception (more specific)
* Extended, and renamed the splicing_setup fixture (now called install_specs)
* Added more specific assertions in each test

One test is currently flaky, due to some instability when sorting multiple specs. It's currently marked xfail
2025-01-15 19:43:55 +01:00
Harmen Stoppels
00e804a94b
package.py: expose types of common globals unconditionally (#48588) 2025-01-15 17:33:38 +01:00
Massimiliano Culpo
6fac041d40
Add type-hints to which and which_string (#48554) 2025-01-15 15:24:18 +01:00
Jordan Galby
c504304d39
Add version attributes up_to_1, up_to_2, up_to_3 (#38410)
Making them also available in spec format string
2025-01-15 13:07:17 +01:00
Harmen Stoppels
976f1c2198
flag_mixing.py: add missing import (#48579) 2025-01-15 10:48:34 +01:00
Greg Becker
e7c591a8b8
Deprecate Spec.concretize/Spec.concretized in favor of spack.concretize.concretize_one (#47971)
The methods spack.spec.Spec.concretize and spack.spec.Spec.concretized
are deprecated in favor of spack.concretize.concretize_one.

This will resolve a circular dependency between the spack.spec and
spack.concretize in the next Spack release.
2025-01-15 10:13:19 +01:00
jclause
335fca7049
Improve support using external modules with zsh (#48115)
* Improve support using external modules with zsh

Spack integrates with external modules by launching a python subprocess
to scrape the path from the module command. In zsh, subshells do not
inheret functions defined in the parent shell (only environment
variables). This breaks the module function in module_cmd.py.

As a workaround, source the module commands using $MODULESHOME prior to
running the module command.

* Fix formatting

* Fix flake error

* Add guard around sourcing module file

* Add improved unit testing to module src command

* Correct style

* Another attempt at style

* formatting again

* formatting again

---------

Co-authored-by: psakievich <psakiev@sandia.gov>
2025-01-14 21:29:15 -07:00
Greg Becker
2447d16e55
bugfix: associate nodes directly with specs for compiler flag reordering (#48496) 2025-01-14 10:15:57 -08:00
Harmen Stoppels
d72b371c8a
relocate_text: fix return value (#48568) 2025-01-14 13:29:06 +01:00
Todd Gamblin
d89ae7bcde
Database: make constructor safe for read-only filesystems (#48454)
`spack find` and other commands that read the DB will fail if the databse is in a
read-only location, because `FailureTracker` and `Database` can try to create their
parent directories when they are constructed, even if the DB root is read-only.

Instead, we should only write to the filesystem when needed.

- [x] don't create parent directories in constructors
- [x] have write operations create parents if needed
- [x] in tests, `chmod` databases to be read-only unless absolutely needed.

---------

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2025-01-14 00:10:51 -08:00
Harmen Stoppels
53d1665a8b
traverse: use deque and popleft (#48353)
Avoids a quadratic time operation. In practice it is not really felt, cause it has a tiny constant.
But maybe in very large DAGs it is.
2025-01-14 00:09:57 -08:00
Cody Balos
66e8523e14
add long_spec property to get fully enumerated spec string (#48389) 2025-01-13 16:43:39 -08:00
Tamara Dahlgren
f556ba46d9
bugfix/r: git property needs to be classproperty (#48228) 2025-01-13 12:14:26 -06:00
Harmen Stoppels
064e70990d
binary_distribution.py: stop relocation old /bin/bash sbang shebang (#48502) 2025-01-13 09:30:18 +01:00
Massimiliano Culpo
8ab6f33eb6
Deprecate make, gmake and ninja globals in package API (#48450)
Instead, depends_on("gmake", type="build") should be used, which makes the global available through `setup_dependent_package`.
2025-01-11 22:43:22 +01:00
Massimiliano Culpo
dd69b646ad
Add subscript notation to packages (#48467)
This PR allows using the subscript notation directly on packages. The
intent is to reduce the boilerplate needed to retrieve package
properties from nodes other than root.
2025-01-10 19:00:51 +01:00
Harmen Stoppels
d6d8800466
executable.py: fix overlapping overload set (#48503) 2025-01-10 16:34:04 +00:00
Harmen Stoppels
d46ac9b1e4
spec.py: fix return type of concretized() (#48504) 2025-01-10 13:31:41 +00:00
Harmen Stoppels
7edb525599
binary_distribution: improve deps_to_relocate (#48484) 2025-01-10 11:32:11 +01:00
Harmen Stoppels
93cd216603
binary_distribution: stop relocating tarballs with relative rpaths (#48488) 2025-01-10 11:30:18 +01:00
Harmen Stoppels
c1d385ada2
traverse: use overload for return type when depth=True vs depth=False (#48482) 2025-01-10 09:53:28 +01:00
Massimiliano Culpo
5085f635dd
Add type hints to spack.util.executable.Executable (#48468)
* Add type-hints to `spack.util.executable.Executable`
* Add type-hint to input
* Use overload, and remove assertions at calling sites
* Bump mypy to v1.11.2 (working locally), Python to 3.13
2025-01-09 14:16:24 -08:00
dependabot[bot]
e76677cbd5
build(deps): bump pygments from 2.18.0 to 2.19.1 in /lib/spack/docs (#48431)
Bumps [pygments](https://github.com/pygments/pygments) from 2.18.0 to 2.19.1.
- [Release notes](https://github.com/pygments/pygments/releases)
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES)
- [Commits](https://github.com/pygments/pygments/compare/2.18.0...2.19.1)

---
updated-dependencies:
- dependency-name: pygments
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2025-01-09 11:31:42 +01:00
Harmen Stoppels
c424611010
directory_layout.py: remove dependency on global spack.store.STORE (#48460) 2025-01-08 17:44:32 +01:00
Harmen Stoppels
fa9ef0ac89
config.py: deprecate config:install_path_scheme (#48463) 2025-01-08 16:02:11 +01:00
Harmen Stoppels
55d9fe20e5
warnings.showwarning: set earlier (#48462)
Co-authored-by: haampie <haampie@users.noreply.github.com>
2025-01-08 07:27:22 -07:00
Harmen Stoppels
434a8d54d4
directory_layout: types and remove kwargs (#48459) 2025-01-08 14:09:36 +01:00
Adrien Bernede
7328c64fc7
CachedCMakePackage: set CMAKE_*_RPATH with implicit and extra rpaths (#48067)
This is useful when CachedCMakePackage is used without the Spack compiler wrapper.
2025-01-08 04:18:44 -07:00
Massimiliano Culpo
4be7b98fd2
Perl build system: add a dependency on gmake (#48437) 2025-01-08 09:10:22 +01:00
Harmen Stoppels
ca8ea63796
compiler.py: deal with temporarily broken compiler (#48418)
When a compiler is temporarily broken, we cache `c_compiler_output:`
`null`. This commit ensures we retry to obtain the `c_compiler_output`.
2025-01-07 09:56:05 +01:00
Lehman Garrison
aa0ab3b38b
py-py-spy: add 0.4.0, and make rust & CargoPackage respect -j (#47883)
* py-py-spy: add 0.4.0

* py-py-spy: port from Package to CargoPackage

* CargoPackage: respect make_jobs

* rust: respect make_jobs during build and install

* spack style

* CargoBuilder: fix make_jobs syntax

* CargoBuilder: don't write to $HOME, use stage dir
2025-01-06 12:14:19 -07:00
Massimiliano Culpo
85c125a0f5
Remove spack.config.add_default_platform_scope (#48425)
This function is used only in tests, and pushes a scope to the
current global CONFIG, when on Windows, regardless of what that
CONFIG is.
2025-01-06 20:06:02 +01:00
Harmen Stoppels
4b4be2e2c2
cmd/__init__.py: pass tests in case n=1 (#48417) 2025-01-06 15:30:29 +01:00
Harmen Stoppels
79027884c7
Add spack API warning with file/line (#48416) 2025-01-06 03:43:04 -07:00
Adam J. Stewart
0a03a92e78
Avoid trailing slashes in strings (#48359) 2025-01-03 23:00:18 +01:00
Harmen Stoppels
0a070512e6
tests: remove file requirement (#48362) 2025-01-03 15:49:06 +01:00
Wouter Deconinck
e374f8fb66
build_environment: only traverse unique edges (#48301)
Wrap EnvironmentVisitor in CoverEdgesVisitor so only unique edges are enqueued.

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2025-01-03 12:17:26 +01:00
Todd Gamblin
f635337af8
Remove years from license headers (#48352) 2025-01-02 15:40:28 +01:00
Alec Scott
022ae8503a oxide-rs: new-package 2025-01-02 01:17:37 -08:00
Massimiliano Culpo
71512f5682
mpich: gather in a single place env modifications needed by mpich derivatives (#48276)
* mpich: gather in a single place env modifications needed by mpich derivatives

MPICH, and its derivatives, share a lot of copy/paste code to setup the
environment during the different stages of the package life-cycle.

This commit gathers the common modifications in a single place (a mixin class),
living in the Mpich package, and makes derivatives import, and reuse, it.

* Fix docs for Python < 3.13
2024-12-30 15:42:16 -07:00
dependabot[bot]
15124d7c73
build(deps): bump urllib3 from 2.2.3 to 2.3.0 in /lib/spack/docs (#48278)
Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.2.3 to 2.3.0.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/2.2.3...2.3.0)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-12-26 09:03:38 -07:00
psakievich
78bd905fe0
Ensure command_line scope is always last (#48255) 2024-12-25 14:32:31 -07:00
Harmen Stoppels
e9cdcc4af0
build caches: collect files to relocate while tarballing w/o file (#48212)
A few changes to tarball creation (for build caches):
- do not run file to distinguish binary from text
- file is slow, even when running it in a batched fashion -- it usually reads all bytes and has slow logic to categorize specific types
- we don't need a highly detailed file categorization; a crude categorization of elf, mach-o, text suffices.
detecting elf and mach-o is straightforward and cheap
- detecting utf-8 (and with that ascii) is highly accurate: false positive rate decays exponentially as file size increases. Further it's not only the most common encoding, but the most common file type in package prefixes.
iso-8859-1 is cheaply (but heuristically) detected too, and sufficiently accurate after binaries and utf-8 files are classified earlier
- remove file as a dependency of Spack in general, which makes Spack itself easier to install
- detect file type and need to relocate as part of creating the tarball, which is more cache friendly and thus faster
2024-12-24 10:53:13 -07:00
Wouter Deconinck
c65a0e03c4
doc: ensure getting_started has bootstrap list output in correct place (#48281) 2024-12-24 04:48:02 -07:00
Massimiliano Culpo
a3322459fe
bootstrap mirror: fix references from v0.4 to v0.6 (#48235) 2024-12-23 14:06:48 +01:00
jnhealy2
6de1ebd71a
Fix silent error when reporting builds to CDash (#47939)
* Fix silent error when reporting builds to CDash
   CDash has a 191 char maximum for build names.  When this
   is exceeded, CDash silently fails to correctly process the
   reported XML. This truncates CDash build names to 190 chars
   and emits a warning indicating it is doing so to prevent
   such errors from occuring.
* test/reporters.py: add unittest for buildname len issue
* test/reporters.py: rename cdash buildname test
* ci/common.py: fix syntax causing breaking test
   It appears that the CDash reporter is expecting a string
   as the buildname.
* Update lib/spack/spack/reporters/cdash.py
   Fix warning message to reflect actual issue.
   Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
* ci/common.py: fix function call to actually call function

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: psakievich <psakiev@sandia.gov>
2024-12-19 14:19:44 -07:00
dependabot[bot]
ec7436be6b
build(deps): bump sphinxcontrib-programoutput in /lib/spack/docs (#47992)
Bumps [sphinxcontrib-programoutput](https://github.com/NextThought/sphinxcontrib-programoutput) from 0.17 to 0.18.
- [Changelog](https://github.com/OpenNTI/sphinxcontrib-programoutput/blob/master/CHANGES.rst)
- [Commits](https://github.com/NextThought/sphinxcontrib-programoutput/compare/0.17...0.18)

---
updated-dependencies:
- dependency-name: sphinxcontrib-programoutput
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-12-19 12:08:20 +01:00
Harmen Stoppels
96a0b0eb08
llnl.util.lang: remove testing literal backtrace output (#48209) 2024-12-19 11:55:41 +01:00
Harmen Stoppels
0850e0bf08
docs: advertise --oci-username-variable and --oci-password-variable (#48189) 2024-12-19 10:15:01 +01:00
Wouter Deconinck
8e163c3565
qmake: docs about virtual provider (#48055) 2024-12-18 17:16:30 -08:00
Todd Gamblin
30e2b15eea
Use Literal now that we have typing_extensions in Spack. (#48172)
Improve our typing by updating some todo locations in the code to use
`Literal` instead of a simple `str`.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-12-18 14:10:14 +01:00
psakievich
0894180cc1
Add more functionality to the stage cmd (#46498)
* Add more functionality to the stage cmd

* Completion commands

* completion again

* Add tests, but they are slow

* Stale comment
2024-12-17 15:07:29 -08:00
kwryankrattiger
dfb529fc6e
Ci set concretiztion pool size (#48077)
* Set the "build_jobs" on concretization/generate for CI

build_jobs also controls the concretization pool size. Set this
in the config section for CI generate.

This config is overwritten by build_job CI using the SPACK_BUILD_JOBS
environment variable. This implicitly will drop the default build
CPU request on all "default" grouped build jobs from (max) 16 to 8.

* Add default allocations for build jobs

* Add common jobs and concretize args to ci generate and rebuild

* CI: Specify parallel concretize and build jobs via argument

* Increase power and cray concretization limits

Lowering limits for these stacks creates timeout

* Increase default pool size to 8

intermittent timeouts with 4 CPU

* Add reduced requests for windows for now
2024-12-17 12:05:15 -06:00
Todd Gamblin
6e2625ae65 package_base: generify accessor methods for when-keyed dictionaries
This turns some variant-specific methods for dealing with when-keyed dictionaries into
more generic versions, in preparation for conditional version definitions.

`_by_name`, `_names`, etc. are replaced with generic methods for transforming
when-keyed dictionaries:
 * `_by_subkey()`
 * `_subkeys()`
 * `_num_definitions()`
 * `_definitions()`
 * `_remove_overridden_defs()`

And the variant accessors are refactored to use these methods underneath.

To do this, types like `WhenDict` had to be generified, and some `TypeVars`
were added for sortable keys and values.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-12-17 07:25:14 -08:00
Todd Gamblin
7f24b11675 Vendor typing_extensions
We are using more and more typing features in Spack, and without features like
protocols, typing core is becoming harder and harder.

I think it's worth vendoring `typing_extensions` for this. It will get us a number of
useful capabilities:

* `Literal`
* `TypedDict`
* `Protocol`

among others.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-12-17 07:25:14 -08:00
Harmen Stoppels
19734832eb
resolve_shared_libraries.py: exclude libanl.so from glibc (#48139) 2024-12-17 11:33:36 +01:00
Harmen Stoppels
06eae96ef9
config:shared_linking:missing_library_policy to error/warn about accidental use of system libraries on linux/freebsd (#47365)
This commit adds a config option `config:shared_linking:missing_library_policy:error/warn/ignore` which will cause installation errors or warnings when ELF executables or libraries need shared libraries which cannot be resolved from RPATH search paths. The default is to ignore.

This is a safeguard against accidentally linking to system libraries instead of Spack libraries. It makes it more likely that build cache installs work on different machines. It works only at the level of libraries, not at the level of symbols. Some system dependencies are allowed (e.g. kernel and libc).

Packages can (but are discouraged to) set `unresolved_libraries` to a list of patterns of sonames/library names that are know to be unresolvable in RPATHs.  In the future this could be made more fine-grained in a non-breaking way by allowing a dictionary of patterns `lib => [deps]`.
2024-12-16 12:32:36 +01:00
Massimiliano Culpo
f6ab2f5b99
unit-test: port changes from compiler as deps (#48104)
Extracted #45189

Common test setup has been extracted in fixtures. Some matrix
dimensions moved from being "compiler" to be "targets".

Use --fake install for packages in test.
2024-12-16 09:27:41 +01:00
Todd Gamblin
0d0ff44e3e
Spec: Remove _normal attribute and unused constructor arguments (#48119)
The `_normal` attribute on specs is no longer used and has no meaning.
It's left over from part of the original concretizer.

The `concrete` constructor argument is also not used by any part of core.

- [x] remove `_normal` attribute from `Spec`
- [x] remove `concrete` argument from `Spec.__init__`
- [x] remove unused `check_diamond_normalized_dag` function in tests
- [x] simplify `Spec` constructor and docstrings

I tried to add typing to `Spec` here, but it creates a huge number of type issues
because *most* things on `Spec` are optional. We probably need separate `Spec` and
`ConcreteSpec` classes before attempting that.

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-12-14 15:24:22 +01:00
Zack Galbreath
a16350df69
Fix typo in ci/README.md (#48114) 2024-12-14 06:22:46 -07:00
Harmen Stoppels
107e4515bd
tests: fix a few open(...) calls (#48113) 2024-12-13 21:38:48 +01:00
Massimiliano Culpo
af6526bb82
ga: add a pylint check to avoid adding open calls without encoding= (#48099) 2024-12-13 21:21:26 +01:00
Harmen Stoppels
a07e372770
filter_file: make tempfile later (#48108)
* filter_file: make tempfile later

* also add a `.` after the filename
2024-12-13 11:49:32 -07:00
Tamara Dahlgren
1c1d439a01
Circular import fix: spack.config -> spack.environment (#48057)
Fix by moving setup to spack.main
2024-12-13 18:44:08 +01:00
Harmen Stoppels
11b86ca75c
package_base.py: remove deprecated props (#48066) 2024-12-13 10:19:16 +01:00
kwryankrattiger
0c2b546825
Remove extraneous newline from reproducer output (#48076)
* Remove extraneous newline from reproducer output

* Convert print -> tty.info
2024-12-13 09:38:43 +01:00
kwryankrattiger
92dbb55703
Mkae Autotools build_system point at correct build_directory (#48072) 2024-12-12 15:58:18 -07:00
Harmen Stoppels
526af1cbe7
Sprinkle open(..., encoding=utf-8) (#48006)
Add missing encoding=utf-8 to various open calls. This makes
files like spec.json, spack.yaml, spack.lock, config.yaml etc locale
independent w.r.t. text encoding. In practice this is not often an
issue since Python 3.7, where the C locale is promoted to
C.UTF-8. But it's better to enforce UTF-8 explicitly, since there is
no guarantee text files are written in the right encoding.

Also avoid opening in text mode if it can be avoided.
2024-12-12 21:46:08 +01:00
Massimiliano Culpo
334a8b0991
ci: remove a custom implementation of a stdlib functionality (#48068) 2024-12-12 12:09:35 -08:00
Harmen Stoppels
9cd2f0a536
filter_file: fix various bugs (#48038)
* `f.tell` on a `TextIOWrapper` does not return the offset in bytes, but
  an opaque integer that can only be used for `f.seek` on the same
  object. Spack assumes it's a byte offset.
* Do not open in a locale dependent way, but assume utf-8 (and allow
  users to override that)
* Use tempfile to generate a backup/temporary file in a safe way
* Comparison between None and str is valid and on purpose.
2024-12-12 20:07:39 +01:00
Harmen Stoppels
687766b8ab
spec.parser / spec.token: improvements (#48063)
Follow-up to #47956 

* Rename `token.py` -> `tokenize.py`
* Rename `parser.py` -> `spec_parser.py`
* Move common code related to iterating over tokens into `tokenize.py`
* Add "unexpected character token" (i.e. `.`) to `SpecTokens` by default instead of having a separate tokenizer / regex.
2024-12-12 17:08:20 +01:00
Massimiliano Culpo
7105cc8c01
Make use of ^ in 'depends_on' an error (#48062)
The use of `^` in `depends_on` directives has never been allowed, since
the dawn of Spack.

Up to now, we used to have an audit to catch this kind of issue, mainly
because in that way we could easily collect all issues and report them
to packagers at once.

Due to implementation details, this audit doesn't work if a dependency
without a `^` is followed by the same dependency with a `^`.

This PR makes this pattern an error, which will be reported eagerly, and
removes the corresponding audit. It also fixes a package using the wrong
idiom.

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-12-12 14:19:05 +01:00
Tamara Dahlgren
c548bcc9ef
Environment: remove self import (#48056) 2024-12-12 10:30:19 +01:00
Tamara Dahlgren
f018e0fe42
Circular import fix: spack.schema.config -> spack.config (#48059)
fix by moving `merge_yaml` from `config.py` to `schema/__init__.py`
2024-12-12 10:07:53 +01:00
Tamara Dahlgren
9aefbb0e96
Circular import fix: spack.oci.opener -> spack.parser (#47956)
by splitting spack.parser into two modules
2024-12-12 10:02:07 +01:00
Scott Wittenburg
de1416b3de
ci: Refactor pipeline generation (#47459)
Reorganize the pipeline generation aspect of the ci module,
mostly to separate the representation, generation, and
pruning of pipeline graphs from platform-specific output
formatting.

Introduce a pipeline generation registry to support generating
pipelines for other platforms, though gitlab is still the only
supported format currently.

Fix a long-existing bug in pipeline pruning where only direct
dependencies were added to any nodes dependency list.
2024-12-11 19:23:37 +00:00