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Author SHA1 Message Date
Glenn Johnson
84dbf6948e Set conflicts parameter for cuda-11 (#18847) 
Magma is not currently compatible with CUDA-11. While this is reflected
in the package, it is done with a comment in a `depends_on` directive,
which has the effect of trying to install a version of CUDA that may be
different from the one in the current environment, without any message
to the end user. A `conflicts` is a better way to handle this.
 2020-09-22 12:35:13 -04:00
Adam J. Stewart
9558377f0f Bash: fix build with Xcode 12 (#18843) 2020-09-22 12:25:54 -04:00
Ganesh Kumar
9e906e2d47 ROCm 3.8 Stage1 Components (#18830) 
* ROCm 3.8 Stage1 Components

* version review comments

* 3.5 dependency restrictions

Co-authored-by: root <root@mlseqa-hyd-virt-srv-07.amd.com>
 2020-09-22 11:09:03 -05:00
Simon Pintarelli
7d0ae0f295 sirius: use -DCUDA_ARCH for develop, version >7.0.0 (#18852) 
Also remove master branch
 2020-09-22 17:35:11 +02:00
victorusu
a078e2ba13 ReFrame: added v3.1 (#18860) 2020-09-22 17:19:51 +02:00
Chris White
30d24db116 Added RAJA v0.12.1`and Umpire v4.0.1 (#18756) 
Also renamed 'master' to 'main'
 2020-09-22 15:40:16 +02:00
Hadrien G
a1e19de8e1 acts: added v1.0 (#18859) 2020-09-22 15:05:59 +02:00
Christoph Junghans
bdefac6964 miniqmc: fix install (#18857) 2020-09-21 18:15:27 -06:00
Robert Blake
b272e00d6a util-linux: fix bash completion install errors. (#18696) 
* Disable bash completion by default.

* flake8

* Adding explicit dependence on libuuid

* Adding explicit dependence on cryptsetup

This way we don't pick up host crypto packages by mistake.

* Fixing the completion directory.

* Update var/spack/repos/builtin/packages/util-linux/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* flake8

* Removing libuuid linkage according to @michaelkuhn on #18696

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-09-21 16:11:44 -05:00
Christoph Junghans
0dd7f140b0 nut: fix install (#18848) 
* nut: fix install

* flake8
 2020-09-21 16:09:53 -05:00
Christoph Junghans
165dbf719d fix spack-build usages (#18846) 2020-09-21 12:19:06 -05:00
Greg Becker
5565b6494d typo (#18845) 2020-09-21 11:54:23 -05:00
Joseph Wang
88187bc63c add groff and ghostscript (#18803) 
Without these packages, graphviz will set groff/ghostscript to false which will cause the build to fail.
 2020-09-21 17:39:13 +02:00
Adam J. Stewart
678e9f5ad2 libksba: add new version (#18798) 2020-09-20 08:53:42 -04:00
Adam J. Stewart
7d5ddb1fc6 readline: simplify linking to ncurses (#18801) 2020-09-19 16:32:42 -05:00
Adam J. Stewart
489377d051 SciPy: add patch to fix XCode 12 build (#18800) 2020-09-19 16:32:26 -05:00
Adam J. Stewart
458dc81878 ncurses: fix libs method (#18799) 2020-09-19 16:32:05 -05:00
Adam J. Stewart
f570d7a45c graphviz: fix build with Apple Clang 12.0.0 (#18797) 2020-09-19 16:29:42 -05:00
Adam J. Stewart
36e9c1eba3 fish: relax ncurses dependency constraints (#18796) 2020-09-19 16:29:27 -05:00
Massimiliano Culpo
fcb4dfc307 Ensure variant defaults are parsable from CLI. (#18661) 
- Add a unit test to check if there are unparsable defaults
- Fix 'rust' and 'nsimd' variants
 2020-09-19 07:54:26 +02:00
Larry Knox
fff2f34de8 Hdf5 1.10.7 (#18712) 
* Update hdf5/package.py for HDF5 1.10.7 release and obsolete home url.
Add maintainer to hdf/package.py.

* remove stray space.

* Remove unnecessary /diplay/support from homepage urls.
 2020-09-18 21:38:56 -05:00
Tom Payerle
e36498cb46 bedtools2: Add missing python build dependency (#18744) (#18746) 
Makefile invokes python to build some scripts
See #18744
 2020-09-18 21:38:21 -05:00
Michael Kuhn
6198963ede popt: Add missing libiconv dependency (#18731) 
Without this dependency, the build fails due to undefined references.
 2020-09-18 18:00:00 -04:00
Adam J. Stewart
b44cf08cb2 py-notebook: add new version (#18638) 2020-09-18 14:46:12 -05:00
Greg Becker
7585b37865 do out of source builds in hashed directories (#18574) 2020-09-18 12:21:13 -07:00
Shahzeb Siddiqui
58fb6cdaad trigger ascent e4s pipeline on merge to spack develop (#18655) 
* trigger ascent e4s pipeline on merge to spack develop

* change pipeline name ecpcitest/e4s is the pipeline that will be triggered for merge on develop its the E4S use-case.
 2020-09-18 10:38:29 -07:00
Glenn Johnson
6e82776773 Add mumax-3.10 release version (#18740) 
This PR adds the current release version of mumax and tweaks the install
of the previous beta version.

- Set the url parameter to reflect the release version over the beta
  version. Hopefully, this will be consistent going forward.
- Set an explicit url for the previous beta version.
- Accept values for `cuda_arch`. The previous version had its own list
  but the release version does not.
- Replace the built in cuda compute capabilities list with the one
  provided by Spack for the 3.10beta version.
 2020-09-18 13:36:00 -04:00
Seth R. Johnson
71c7e28ca7 swig: add version 4.0.2 and 4.0.2-fortran (#18741) 2020-09-18 13:35:33 -04:00
Greg Becker
2e4892c111 env view failures: print underlying error message (#18713) 2020-09-18 10:21:14 -07:00
Jen Herting
44c7826892 [py-pyarrow] added variant cuda (#18716) 
* [py-pyarrow] added variant cuda

* [py-pyarrow] simplifying variant dependencies
 2020-09-18 10:28:28 -05:00
darmac
8cb1192050 util-linux: fix build error (#18647) 
* util-linux: fix build error

* refine install stage
 2020-09-18 10:04:28 -05:00
darmac
a4cdf664c6 Add new package: shiro (#18541) 
* Add new package: shiro

* refine description and dependencies
 2020-09-18 10:03:32 -05:00
ketsubouchi
403ea4384e ocaml: support 4.11 (#18705) 2020-09-18 10:02:50 -05:00
Toyohisa Kameyama
7d0a46c051 iwyu: Require llvm+all_targets on non-x86_64 systems (#18710) 2020-09-18 10:31:03 -04:00
Axel Huebl
a8b6faf430 py-recommonmark: fix URL and docutils version (#18714) 2020-09-18 12:07:57 +02:00
Axel Huebl
275583c02f py-breathe: added v4.21.0 (#18722) 2020-09-18 07:44:54 +02:00
Mark W. Krentel
80fe51046c libpfm4: add version 4.11.0 (#18720) 
Add version 4.11.0 for libpfm4.
Add myself as maintainer.
 2020-09-17 15:58:23 -05:00
Jen Herting
e329e13f32 [arrow] added cuda variant (#18715) 2020-09-17 15:26:51 -05:00
Glenn Johnson
4b41d56bc3 Add bart-0.6.00 (#18717) 
This PR adds version 0.6.00 of bart.
 2020-09-17 15:25:08 -05:00
Adam J. Stewart
f9699fd3ff py-nbconvert: add new version (#18636) 2020-09-17 15:23:59 -05:00
Adam J. Stewart
69d8417d8a py-nbclient: add new package (#18628) 2020-09-17 12:54:03 -07:00
Adam J. Stewart
01df552149 py-matplotlib: add v3.2.2 (#18681) 2020-09-17 12:46:20 -07:00
t-nojiri
b66d756da6 bowtie : Fix for aarch64 (#18709) 2020-09-17 11:42:32 -05:00
Glenn Johnson
7c01c64d53 gpu-burn: allow to build with non-gcc compilers (#18707) 
This PR modifies the patch to use $(CXX) rather than g++ to allow the
spack compiler to be used.
 2020-09-17 17:24:22 +02:00
Glenn Johnson
2576d8d767 Update libbeagle (#18703) 
This PR fixes a couple of things with the libbeagle package.

- libbeagle can only be built for one GPU type. Add a test for that.
- version 2 had the arch statement in
  libhmsbeagle/GPU/kernels/Makefile.am but version 3 has it in
  configure.ac. Put the variant specified value in configure.ac for
  consistency.
 2020-09-17 10:04:21 -05:00
Ganesh Kumar
0f332c73a6 Rocm 3.7 miopen, miopengemm, rocalution and rocm-opencl (#18690) 
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values

* rocm3.7 change for miopen, rocalution and rocm-opencl

* review comments
 2020-09-17 10:00:45 -05:00
Enrico Usai
91bd99b4b2 aws-parallelcluster: add 2.9.1 and 2.9.0 releases (#18676) 
Checked all the third party dependencies for all the versions.
 2020-09-17 09:59:11 -05:00
arjun-raj-kuppala
7fb83047fd Hipify clang with AMD rocm 3.7.0 update (#18672) 
* Hipify clang with rocm 3.7.0 update

* Update var/spack/repos/builtin/packages/hipify-clang/package.py

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2020-09-16 22:18:48 -05:00
Greg Sjaardema
9a5f043ce6 seacas: Force use of non-mpi-enabled hdf5 (#18702) 
Due to recent changes in the `netcdf-c` package, it is now necessary to explicitly request a non-mpi-enabled hdf5 build if building a non-mpi-enabled seacas.
 2020-09-16 16:37:13 -05:00
Robert Blake
f95d7959b2 lustre: Adding external support. Closing #18698 (#18700) 2020-09-16 16:29:59 -05:00