Commit Graph

16844 Commits

Author SHA1 Message Date
Houjun Tang
69464bf36f
pdc: add new package (#24762)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-28 18:31:25 +02:00
Dylan Simon
e3096e94b1
poppler: drop splash patch for 21.07.0 (#25032)
ENABLE_SPLASH configuration has been removed entirely after 21.06 so
patch is no longer necessary after #24931.  (Versions between 0.90.1 and
21.06 will likely still need a patch, and while it's not clear if this
patch is the right one, seems better to leave something in.)
2021-07-28 18:23:56 +02:00
Tim Moon
c9327649c0
nvshmem: set env variables instead of appending (#25095) 2021-07-28 16:07:24 +00:00
Tom Stitt
68f696af64
glvis: add v4.0 (#25045) 2021-07-28 17:51:53 +02:00
downloadico
737936d02c
octopus: add v10.5 (#25068) 2021-07-28 17:47:42 +02:00
Ethan Stam
a7ed20cb92
ParaView: disable VTK_MODULE_USE_EXTERNAL_ParaView_vtkcatalyst to avoid looking for external Catalyst_DIR (#25061) 2021-07-28 17:30:21 +02:00
Glenn Johnson
e29168ad02
gurobi: add v9.1.2 and extend python (#25064)
- add version 9.1.2
- set a license file
- set the license environment variable
- remove the download and license information out of the description so
  it does not show up in environment modules
- extend python and set python version constraints
- build gurobipy to be used in any compatible python, used for more
  extensive computations than the gurobi shell
- remove preexisting PYTHONPATH from gurobi.sh as the shell uses a
  built-in python, which will likely be different from "system" python
- add maintainer
2021-07-28 17:29:32 +02:00
gpotter2
be2e224e75
vtk-m: add conflict with gcc version < 5.0 (#25117) 2021-07-28 16:24:27 +02:00
iarspider
4d96f2668b
py-absl-py: add v0.11.0, v0.12.0, v0.13.0 (#25122) 2021-07-28 15:36:39 +02:00
Sreenivasa Murthy Kolam
ac2444f1d5
fix roctracer references in hip and cleanup code in rocprofiler-dev recipe (#24994)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-07-28 10:36:35 +02:00
Richarda Butler
af468235e2
AML: Add E4S testsuite stand alone test (#23874) 2021-07-27 17:30:34 -07:00
Jen Herting
e5bbb6e5b4
[py-lmfit] added version 1.0.2 (#25108)
* [py-lmfit] fixed py-asteval dependency requirements

* [py-lmfit] added version 1.0.2

* [py-lmfit] flake8

* [py-lmfit] 1.0.2 reqires python 3.6

* [py-lmfit] removed newer dependency requirements to be in line with setup.py not requirements.txt
2021-07-27 16:59:45 +00:00
Seth R. Johnson
0a41d4ebb8
pbs: new virtual package (#24568)
* pbs: new virtual package

Some of our clusters have an older installation of
libtorque and tm.h that are *not* from OpenPBS. Using the current
openpbs dependency for openmpi causes concretization errors due to
restrictions on older python and hwloc requirements that don't apply,
even with an external non-buildable installation.
The new 'torque' bundle package allows users to point to that external
installation without problems.

Detailed description of torque by Sergey Kosukhin <skosukhin@gmail.com>
2021-07-27 16:37:00 +00:00
Timo Heister
ca260a3d63
aspect: add v2.3.0 (#25100) 2021-07-27 14:55:29 +02:00
Adam J. Stewart
4eaa5a2635
py-sphinx: add versions up to v4.1.2 (#25092) 2021-07-27 14:54:46 +02:00
Garth N. Wells
aeacc2ff92
pybind11: add v2.7.0 (#25103) 2021-07-27 14:53:02 +02:00
Garth N. Wells
b69c4a66e7
Add xtensor 0.23.10 and xsimd 07.5.0 version (#25105) 2021-07-27 14:52:36 +02:00
Adam J. Stewart
de3fa5556a
serf: add missing libuuid dependency (#25098) 2021-07-27 14:50:59 +02:00
Satish Balay
06a292290e
openmpi: fix cuda dependency (#25101) 2021-07-27 06:41:15 -04:00
Michael Kuhn
1454935edc
libfuse: fix typo (#25104)
This caused both static and shared libraries to be disabled.
2021-07-27 10:28:21 +02:00
Adam J. Stewart
6472ee8c76
py-sphinxcontrib-serializinghtml: add new version (#25091) 2021-07-26 15:03:52 -04:00
Adam J. Stewart
8a8aa16f1b
py-sphinxcontrib-htmlhelp: add new version (#25090) 2021-07-26 15:03:38 -04:00
Rémi Lacroix
43c135e3ce
n2p2 package: Add version 2.1.4 (#25031) 2021-07-26 11:16:13 -07:00
tilne
98549ddbe5
aws-parallelcluster: add v2.11.1 (#25089)
* aws-parallelcluster: update maintainers list

Signed-off-by: Tim Lane <tilne@amazon.com>

* aws-parallelcluster: add v2.11.1

Signed-off-by: Tim Lane <tilne@amazon.com>
2021-07-26 10:37:15 -05:00
Thomas Madlener
4a19741a36
yoda: only depend on root if explicitly desired (#25087) 2021-07-26 13:50:00 +02:00
Erik Schnetter
cef3a2a6ee
asdf-cxx: require a particular version of yaml-cpp (#24988) 2021-07-26 10:28:02 +02:00
Harmen Stoppels
c912911d0e
roc-tracer: remove py-setuptools since it is not used (#25010) 2021-07-26 10:27:33 +02:00
Tamara Dahlgren
6d30299d80
eigenexa: update stand-alone tests to use test stage work directory (#24129) 2021-07-26 10:25:36 +02:00
Tamara Dahlgren
cb87271a01
genesis: update stand-alone tests to use test stage work directory (#24193) 2021-07-26 10:24:29 +02:00
Rémi Lacroix
9edd281044
genesis: add v1.6.0. (#25055) 2021-07-26 10:20:25 +02:00
Kevin Harms
e666a3b366
Smoke test for darshan-runtime, builds a test code, runs it and check… (#25049) 2021-07-26 10:04:39 +02:00
Adam J. Stewart
eef514a1dc
py-pandas: add v1.3.1 (#25076) 2021-07-26 10:03:13 +02:00
Adam J. Stewart
9e01fcf0de
py-antlr4-python3-runtime: add v4.8 (#25078) 2021-07-26 10:02:19 +02:00
Adam J. Stewart
696f9458c2
py-torchmetrics: add new version (#25081) 2021-07-26 09:59:51 +02:00
Manuela Kuhn
de6d3ef1ee
rstudio: add new package (#24647)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-26 09:57:56 +02:00
Adam J. Stewart
24048b3545
py-pyprecice: simplify package (#25077) 2021-07-26 09:55:51 +02:00
Adam J. Stewart
5f44b0ad48
py-omegaconf: add missing java dependency (#25080) 2021-07-26 09:55:13 +02:00
Silvio Traversaro
f68b91defe
libdc1394: add new package (#25079) 2021-07-26 09:54:19 +02:00
romerojosh
7339f2d476
Fix LBANN and related packages CMake CUDA arch flag (#25062) 2021-07-26 09:16:38 +02:00
Glenn Johnson
63e04ce220
Fix tesseract package (#24304)
This PR fixes the tesseract package
- add missing dependencies
- build documentation
- build and install java component
- build and install training component
2021-07-26 07:49:58 +02:00
Alec Scott
d6432e9718
bedops: add v2.4.40 (#25065) 2021-07-26 07:48:11 +02:00
Alec Scott
1cf43cd2fc
picard: add versions up to v2.25.7 (#25063) 2021-07-26 07:47:41 +02:00
Matthieu Dorier
ed0c3233db
lua-sol2: added new package (#25067) 2021-07-26 07:47:04 +02:00
Alec Scott
794931f0d7
Rclone: add v1.56.0 (#25066) 2021-07-25 14:09:07 +02:00
Michael Kuhn
0d54bd68c1
freetype: add v2.11.0 (#25075) 2021-07-25 14:01:38 +02:00
vsoch
4208cf66be spack style: automatically bootstrap dependencies
This uses our bootstrapping logic to automatically install dependencies for
`spack style`. Users should no longer have to pre-install all of the tools
(`isort`, `mypy`, `black`, `flake8`). The command will do it for them.

- [x] add logic to bootstrap specs with specific version requirements in `spack style`
- [x] remove style tools from CI requirements (to ensure we test bootstrapping)
- [x] rework dependencies for `mypy` and `py-typed-ast`
      - `py-typed-ast` needs to be a link dependency
      - it needs to be at 1.4.1 or higher to work with python 3.9

Signed-off-by: vsoch <vsoch@users.noreply.github.com>
2021-07-24 07:07:35 -07:00
Paul Kuberry
bb20cadd91
Only add hwloc to tpl/dep list for certain versions of Trilinos (#25071) 2021-07-24 07:20:51 -04:00
iarspider
0beb35e426
Added versions of py-grpcio upto 1.39.0 (#25056)
Tested only `py-grpcio@1.39.0 ^grpcio@1.39.0`
2021-07-23 21:42:32 -05:00
Filippo Spiga
25c09e7a56
nvhpc: add v21.7 (#25040) 2021-07-23 09:10:50 +00:00
iarspider
e083d32f10
Add grpc upto 1.39.0 and update dependencies (#25037) 2021-07-23 08:58:56 +00:00
Dylan Simon
7b0d869c3c
pgplot: fix with gcc<10 (#25042) 2021-07-23 01:34:26 -07:00
Tom Stitt
dc3e1d9a40
sdl2: add v2.0.14 (#25046) 2021-07-23 10:24:38 +02:00
Caleb Robinson
0c65433dd3
py-omegaconf: add new package (#25052)
* Adding package for omegaconf

* Update var/spack/repos/builtin/packages/py-omegaconf/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Changing py-omegaconf to use github source URL instead of pypi

* Style fix

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-22 21:37:36 -07:00
Satish Balay
b89286d0de
amrex: add variant plotfile_tools (#25038) 2021-07-22 22:29:58 -04:00
Filippo Spiga
accdf4445d
Adding CUDA SDK 11.4.0 (#24609)
* Adding CUDA SDK 11.4.0

* Fixing import order (finger crossed)

* Fixing import order (thanks alalazo for the tips)

* Restored URLs for 11.4.0
2021-07-22 16:57:09 -07:00
Kevin Harms
0825463904
Add smoke test for darshan-util (#25016) 2021-07-22 16:46:09 -07:00
wspear
91b4d974f1
Add test operation to tau package (#25036)
Copy over the general purpose mm matmult testcase. On test run build, execute (with mpi as needed) and process profile output.
2021-07-22 10:09:18 -07:00
Seth R. Johnson
8735d0a281
Trilinos: enable x11 when +exodus (#25033)
* trilinos: rearrange dependencies

* trilinos: refactor tpl enables and add libx11 for +exodus

Fixes #25028
2021-07-22 12:27:29 -04:00
Richarda Butler
68dbca64e7
Archer: Add E4S testsuite stand alone test (#24729) 2021-07-22 09:26:14 -07:00
Adam J. Stewart
0b6a0dd7fa
py-torch: fix build on blue waters (#25026) 2021-07-22 07:13:36 -07:00
Adam J. Stewart
4e0f97bee3
PROJ: set PROJ_LIB env var (#25029) 2021-07-22 14:44:59 +02:00
natshineman
c0b6d42b23
Update MVAPICH2 Maintainers and GDR Dependencies (#25027)
Co-authored-by: Nick Contini <contini.26@buckeyemail.osu.edu>
Co-authored-by: Nat Shineman <shineman.5@buckeyemail.osu.edu>
2021-07-22 05:37:51 -07:00
Adam J. Stewart
537d316311
py-tensorboard-plugin-wit: fix build on Ubuntu (#25025) 2021-07-22 05:31:40 -07:00
albestro
7ad72de0d3
boost: conflict with GCC on macOS (#24917)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-07-22 09:49:20 +02:00
Iman Hosseini
8cfb0a0d52
nut: reflect conflict with nvhpc (#25023)
'random123' is a template library and cannot be compiled with nvhpc

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-22 08:34:06 +02:00
Ethan Stam
7011608be0
ParaView: Add cli11 dependency (#24732) 2021-07-21 16:51:49 -07:00
Harmen Stoppels
8e59c847dd
fix rocprofiler includes (#25009) 2021-07-21 16:21:36 -07:00
Robert Pavel
f12fccce65
flecsi: package updates (#24986)
Worked with flecsi developers to tighten, relax, and clarify
constraints and better understand how the flecsi project uses
legion. In the process, discovered that flecsi@1.4 cannot be
built with legion without heavy changes/reverts to the legion
and gasnet spackages.

Also, most importantly, fixed branding as to how flecsi is spelled
2021-07-21 22:43:51 +02:00
Adam J. Stewart
497dfee320
py-segmentation-models-pytorch: add new package (#25022) 2021-07-21 20:14:41 +00:00
Richarda Butler
dfc0aa86ee
Bolt: Add E4S testsuite stand alone test (#24846) 2021-07-21 19:40:14 +00:00
Matthieu Dorier
2db3459e6b
libpmemobj-cpp: fixing package not building because of valgrind flag (#24967) 2021-07-21 21:38:32 +02:00
Matthieu Dorier
feb0556664
pmdk: added versions up to 1.11.0 (#24972) 2021-07-21 21:36:32 +02:00
Adam J. Stewart
1f59163e8c
py-efficientnet-pytorch: add new package (#25021) 2021-07-21 19:33:45 +00:00
Adam J. Stewart
e1b2ab0105
py-pretrainedmodels: add new package (#25020) 2021-07-21 19:30:59 +00:00
Ryan Mast
147c4fb96d
helics: added "main" version (#24987) 2021-07-21 21:28:32 +02:00
Adam J. Stewart
df8e51d6e5
py-timm: add new package (#25019) 2021-07-21 19:25:04 +00:00
Tom Payerle
5a49264e19
metis: suppress warnings causing issues for %nvhpc builds (#25014)
We add compilation flags when using %nvhpc to suppress warnings
(which due to global -Werror flag in the build get promoted to
errors) for the following:
Diagnostic 111: statement is unreachable
Diagnostic 177: variable "foo" was declared but never referenced
Diagnostic 188: enumerated type mixed with another type
Diagnostic 550: variable "foo" was set but never used
2021-07-21 21:24:51 +02:00
Martin Pokorny
4a4d1759f5
Kokkos: allow c++17 starting with CUDA v11.0.0 (#25018) 2021-07-21 21:19:49 +02:00
Jonathan R. Madsen
80592613ad
timemory package: add versions including 3.2.3; update options (#24825)
* add variants: python hatchet/line-profiler support and likwid
  nvmon support
* removed ompt_standalone/ompt_llvm variants
2021-07-21 11:54:04 -07:00
Manuela Kuhn
9237a9f244
py-python-xmp-toolkit: add new package (#25008) 2021-07-21 06:52:38 -07:00
Matthieu Dorier
7a458be3eb
tkrzw: added more versions and compression variant (#24953) 2021-07-21 13:32:52 +00:00
Manuela Kuhn
9c96cc578e
py-soupsieve: add 1.9.6 and 2.2.1 (#24973) 2021-07-21 08:31:14 -05:00
Manuela Kuhn
1cf52de47a
py-requests-ftp: add new package (#24975) 2021-07-21 08:30:50 -05:00
Manuela Kuhn
8a038ef64c
py-duecredit: add new package (#25006) 2021-07-21 13:08:12 +00:00
Harmen Stoppels
bb985e40dd
z3: disable python binding by default (#25007)
z3 is a dependency of llvm and llvm-amdgpu, and when z3 python bindings
are enabled it depends on py-setuptools as a run dependency. That's
fine, except that py-setuptools now influences the hash of
llvm/llvm-amdgpu, which can be very annoying when another package
restricts the py-setuptools version -- you'll end up recompiling llvm
for no good reason :(.
2021-07-21 14:44:18 +02:00
Erik Schnetter
1c06ec0c11
yaml-cpp: add v0.7.0 (#24996) 2021-07-21 14:21:27 +02:00
Brian Van Essen
4e885b4358
lbann: update darwin build (#24998)
* Updated the lbann package to not enabled OpenMP in BLAS package when
working on Darwin systems.

* Add the Sphinx RTD theme as an explicit dependency when building documentation
2021-07-21 14:20:53 +02:00
Erik Schnetter
9b48827a10
pgplot: add libs method (#24999) 2021-07-21 14:19:02 +02:00
Erik Schnetter
7c5f48c99b
lorene: Use correct library names of dependencies (#25000)
Query `spec[...].libs` to find out library flags and names of dependencies.

Also define `libs` property.
2021-07-21 14:18:36 +02:00
Erik Schnetter
1ae760ef31
ssht: add v1.4.0 (#25001) 2021-07-21 14:17:48 +02:00
Robert Underwood
04c5582eb2
sz: add v2.1.12 (#25004) 2021-07-21 14:17:25 +02:00
Manuela Kuhn
78a5e98721
py-citeproc-py: add new package (#25005) 2021-07-21 14:12:47 +02:00
Manuela Kuhn
669769c090
exempi: add new package (#24982) 2021-07-21 14:11:21 +02:00
Erik Schnetter
cb53a9cc14
gperftools: New version 2.9.1 (#24997) 2021-07-21 11:02:48 +02:00
Tamara Dahlgren
ad16eeb9af
Ascent: removed redundant cuda variant (#24576) 2021-07-21 10:58:38 +02:00
Chris White
f6d9a1876a
add new blt version (#25003) 2021-07-21 00:46:34 -07:00
Manuela Kuhn
af806a8c1e
py-rnc2rng: add new package (#24990) 2021-07-21 01:43:18 +00:00
Manuela Kuhn
5ec52fc3f8
py-flask-restful: add new package (#24875) 2021-07-20 20:38:17 -05:00
Manuela Kuhn
c543b86e81
py-httpretty: add new package (#24977) 2021-07-20 20:37:09 -05:00
Manuela Kuhn
3be54d4aab
py-vcrpy: add new package (#24978) 2021-07-20 20:34:25 -05:00