Commit Graph

20636 Commits

Author SHA1 Message Date
Brian Van Essen
d8a5638d9f
Fixed the range on Catch2 to avoid v3.x (#31242) 2022-06-23 16:10:27 -07:00
Luke Diorio-Toth
158f6ddb14
py-instrain: adding new package (#31244)
* py-instrain: adding new package

* py-instrain: fixed style

* removed unnecessary setuptools and numba version restrictions

* fixed pandas version
2022-06-23 22:58:45 +00:00
haralmha
86d1a6f2fc
hadoop-xrootd: Add clang conflict (#31215)
* hadoop-xrootd: Add clang conflict

* Flake8

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-06-23 16:45:39 -06:00
Mikael Simberg
ca10ff1649
Allow using mimalloc 2 in pika and HPX (#31260) 2022-06-23 15:33:03 -07:00
Adam J. Stewart
19175b9bab
keyutils: add macOS conflict (#31236) 2022-06-23 16:13:37 -06:00
Richard Berger
7d64a8e81f
add charliecloud 0.27 and fix master install (#31247)
* charliecloud: custom autoreconf and require py-pip and py-wheel for master

* charliecloud: add 0.27

* charliecloud: add minimum py-pip version
2022-06-23 15:03:03 -07:00
Adam J. Stewart
a0b68a0baa
rpcsvc-proto: add v1.4.3 (#31253) 2022-06-23 14:59:55 -07:00
Harmen Stoppels
b7e0692dfa
libfuse: 3.11.0 (#31259) 2022-06-23 14:55:47 -07:00
Maciej Wójcik
8cc62ef916
Add some GROMACS versions (#31264)
* gromacs: add recent version

* gromacs-swaxs: add recent versions

* gromacs-chain-coordinate: add recent version
2022-06-23 14:53:32 -07:00
Stephen Sachs
2363aba710
[lammps] Rename master -> develop branch (#31263)
https://github.com/lammps/lammps/pull/3311

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2022-06-23 14:40:55 -07:00
Weston Ortiz
5a0c56229c
goma: update package with new version and options (#31267) 2022-06-23 14:10:14 -07:00
AMD Toolchain Support
96bb72e412
Updated sha256 value for amdlibflame (#31269) 2022-06-23 14:07:09 -07:00
Adam J. Stewart
7c977733f1
py-pandas: add v1.4.3 (#31270) 2022-06-23 14:05:49 -07:00
Brian Van Essen
d48a760837
Add the rocm tag to packages from the Radeon Open Compute Platform. (#31187)
* Add the rocm tag to packages from the Radeon Open Compute Platform.

* Added more packages from the ROCm software distribution based on
reviewer feedback.

* Updated tags based on reviewer feedback
2022-06-23 09:10:01 -07:00
Brian Van Essen
c64298a183
Enable MVAPICH2 to use the mpichversion executable to detect externals (#31245)
This is an an alternative to mpiname.
2022-06-23 07:41:25 +02:00
Ben Boeckel
31d89e80bc
protobuf: add 21.1 (#31249)
Older versions have compile errors under newer compilers (e.g., gcc-12).
2022-06-22 19:33:54 -06:00
Luke Diorio-Toth
2844f1fc45
added racon conflict with new versions of gcc (#31243) 2022-06-22 18:00:27 -07:00
Vicente Bolea
8b85f8ec58
vtk-m: change smoke test (#29113) 2022-06-22 18:58:03 -06:00
Nicholas Sly
c3fecfb103
Add --disable-wrapper-runpath to openmpi when ~wrapper-rpath to avoid build time error. (#31221)
Co-authored-by: Nicholas Cameron Sly <sly1@rzalastor2.llnl.gov>
2022-06-22 16:57:55 -06:00
JeromeDuboisPro
5e9a8d27f7
add first version of py-pyrr package (#31211)
* add first version of py-pyrr package

* added license

* update license HEADER

* Remove preferred as there is only one version available

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Better specify dependency type

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* remove useless variable license

Co-authored-by: Jérôme Dubois <jerome.dubois@cea.fr>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-06-22 10:36:49 -07:00
Manuela Kuhn
ffc90f944c
py-bids-validator: add 1.9.4 (#31230) 2022-06-22 10:35:57 -07:00
Harmen Stoppels
699c0cf9a0
squashfs-mount: new package (#31225) 2022-06-22 14:31:20 +02:00
Tamara Dahlgren
35d07a6f18
Add missing '?full_index=1' to meson 9850.patch URL (#31222)
* Add missing '?full_index=1' to meson 9850.patch URL

* Correct checksum

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-06-22 08:56:49 +02:00
Adam J. Stewart
1f42a5e598
py-geopandas: add v0.11.0 (#31218) 2022-06-21 18:14:04 -07:00
Adam J. Stewart
967463432b
py-shapely: env vars always needed (#31217) 2022-06-21 18:11:36 -07:00
Howard Pritchard
bc03b5caaf
meson: fix to recognize intel oneapi compiler (#30605)
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2022-06-21 10:47:46 -07:00
Adam J. Stewart
77118427b1
grep: add +pcre variant (#31204) 2022-06-21 10:06:42 -07:00
haralmha
1a024963a2
frontier-client: Add openssl and zlib directories to search path (#31212) 2022-06-21 09:38:24 -07:00
Robert Cohn
d95f53e1ac
New (external-only) package: oneapi-igc (#31045) 2022-06-20 13:38:41 -07:00
Massimiliano Culpo
8ec451aa7d
setuptools: add v62.4.0 (#31112) 2022-06-20 08:59:58 -07:00
Stephen Sachs
14349cb882
lammps: add lammps_sizes variant (#31182)
This is translated to CMakes LAMMS_SIZES variable. Used to select integer sizes.

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2022-06-20 09:39:03 +00:00
Pariksheet Nanda
bc438ed4e9
ome-files-cpp: add v0.6.0 (#31156) 2022-06-20 10:16:21 +02:00
Adam J. Stewart
9325c8e53f
py-tensorboard-data-server: fix build on Apple M1 (#30908) 2022-06-20 10:12:32 +02:00
HELICS-bot
fd5b7d6cce
helics: add v3.2.1 (#31190)
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
2022-06-20 09:54:57 +02:00
Cory Bloor
b19a0744f1
rocm: add master and develop to BLAS and SOLVER (#30273) 2022-06-20 09:52:47 +02:00
Sebastian Ehlert
75d0c0dff7
fpm: add v0.6.0 (#31193) 2022-06-20 09:49:21 +02:00
Adam J. Stewart
aedc41c3a0
texlive: fix and deprecate live version (#31195) 2022-06-20 09:44:36 +02:00
Valentin Churavy
1f39d6d916
Julia: add v1.7.3 (#31196) 2022-06-20 09:41:50 +02:00
Ye Luo
1bc3b0a926
quantum-espresso: Add 7.1 (#31192) 2022-06-18 23:32:28 +02:00
Ryan Marcellino
62596fb796
py-f90wrap: new version (#31174) 2022-06-17 17:09:34 -06:00
Brian Van Essen
249c90f909
Added the ecp and radiuss tags to the LBANN software stack packages. (#31188) 2022-06-17 21:25:50 +00:00
Kyle Gerheiser
043b2cbb7c
Fix external compiler detection for MPICH and OpenMPI (#30875)
os.path.dirname was being used to compare compilers. If two compilers
are in the same directory then it will pick up the first one it encounters.

Compare the full compiler path instead.
2022-06-17 14:01:49 -06:00
Bernhard Kaindl
aedf215b90
openssh: don't suid-install ssh-keysign (not used by default) (#31083) 2022-06-17 12:09:52 -06:00
Mikhail Titov
eed4a63be7
rct: update packages (RE, RG, RP, RS, RU) with new versions (#31172) 2022-06-17 10:44:22 -07:00
Chuck Atkins
85dc20cb55
Spec: Add a new virtual-customizable home attribute (#30917)
* Spec: Add a new virtual-customizable home attribute

* java: Use the new builtin home attribute

* python: Use the new builtin home attribute
2022-06-17 10:29:08 -04:00
Massimiliano Culpo
667c39987c
py-setuptools: install setuptools from wheels directly (#31131)
When installing setuptools from sources in Spack, we might
get into weird failures due to the way we use pip.

In particular, for Spack it's necessary to install in a
non-isolated pip environment to allow using PYTHONPATH as a
selection method for all the build requirements of a
Python package.

This can fail when installing setuptools since there might
be a setuptools version already installed for the Python
interpreter being used, with different entry points than
the one we want to install.

Installing from wheels both pip and setuptools should
harden our installation procedure in the context of:
- Bootstrapping Python dependencies of Spack
- Using external Python packages
2022-06-17 10:42:28 +02:00
Cyrus Harrison
f35d8c4102
vtk-h: use cmake base pkg, overhaul recipe (#28898)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-06-17 09:59:57 +02:00
Sreenivasa Murthy Kolam
6ac3186132
Support 'spack external find' for rocm packages (#30792) 2022-06-17 09:34:49 +02:00
Robert Cohn
466572dc14
Update Intel package descriptions (#31150) 2022-06-17 09:23:40 +02:00
Harmen Stoppels
1c0bf12e5b
openssl package: default to mozilla certs (#31164)
On Cray systems that use Cray Data Virtualization Service (DVS),
symlinks across filesystems are not allowed, either due to a bug, or
because they're simply not POSIX compliant [1].

Spack's OpenSSL package defaults to `certs=system` which comes down to
symlinking `/etc/ssl` in the Spack install prefix, triggering this
problem, resulting in mysterious installation failures.

Instead of relying on system certs, we can just use
`ca-certificates-mozilla`, and if users really need system certs, then
they're probably better off marking OpenSSL entirely as external.

[1] https://github.com/glennklockwood/cray-dvs
2022-06-16 23:25:32 -06:00