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Author SHA1 Message Date
Wouter Deconinck
d9113eb5ec gaudi package: add version 36.4 (#29241) 2022-03-01 18:47:21 -08:00
Valentin Volkl
4831daa2dc sherpa package: deprecate old versions with build failures (#29268) 2022-03-01 18:46:00 -08:00
Phil Carns
d5dd6471fc mochi-margo package: add version 0.9.7 (#29275) 2022-03-01 18:44:03 -08:00
Glenn Johnson
277f578707 Fix tags attribute for tar (#29189) 2022-03-01 18:35:44 -07:00
iarspider
3478b06262 py-gosam: use legacy setup.py invocation (fixes #29260) (#29264) 2022-03-01 18:31:48 -06:00
Richarda Butler
7268ab75f4 Superlu: Update Spack test dir (#27844) 
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-03-01 16:20:47 -08:00
Harmen Stoppels
f2c5092588 llvm: add missing system libs (#29270) 
```
$ ./bin/llvm-config --link-static --system-libs
-lrt -ldl -lpthread -lm -lz -ltinfo -lxml2
```

`libz` and `libxml2` were missing.
 2022-03-01 15:35:38 -07:00
Jen Herting
d05560ee32 New package: py-deepsig (#28480) 
* [py-deepsig] New package and several cherry picks

* [py-deepsig] Cleanup of testing comments

* finished package with git reference

* fixed flake8 issue

* [py-deepsig] fixed copyright

* [py-deepsig] switched to version with functional requirements.txt. Ignoring missing README_RAW.md

* [py-deepsig] updated version in pypi variable

* [py-deepsig] simplifying missing readme workaround

Co-authored-by: Doug Heckman <dahdco@rit.edu>
Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2022-03-01 13:21:04 -07:00
Manuela Kuhn
71f081366b py-neurora: add 1.1.6.1 (#29265) 2022-03-01 13:51:49 -06:00
Manuela Kuhn
327fcf7a54 py-nest-asyncio: add 1.5.4 (#29262) 2022-03-01 13:48:45 -06:00
Manuela Kuhn
8cefe38b0e py-keyrings-alt: add 4.1.0 (#29177) 2022-03-01 07:20:52 -07:00
Manuela Kuhn
88eb437d94 py-keyring: add 23.5.0 (#29176) 2022-03-01 06:54:10 -07:00
Manuela Kuhn
a155975b8b mesa: add conflict with llvm@13 (#28870) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2022-03-01 11:10:58 +01:00
Tamara Dahlgren
b20df12d09 test_env_install_two_specs_same_dep: properly check installed specs (#29222) 2022-03-01 10:35:14 +01:00
Harmen Stoppels
f60c6ca485 libuv: remove bash dependency (#29251) 2022-03-01 10:15:22 +01:00
Wouter Deconinck
a3947381c7 assimp: patch for issue that prevents 5.1: from working with qt (#29257) 2022-02-28 18:42:08 -07:00
Manuela Kuhn
6eef12cd10 py-nbclassic: add 0.3.5 (#29220) 
* py-nbclassic: add 0.3.5

* Update var/spack/repos/builtin/packages/py-nbclassic/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fix style

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-02-28 16:36:06 -07:00
Cory Bloor
2bd016895d rocblas: add spack test support (#27436) 
* rocblas: add spack test support

* rocblas: limit spack test support to @4.2.0:

* rocblas: simplify define
 2022-03-01 00:26:08 +01:00
Jen Herting
10f3113b3c New package: py-ci-sdr (#28644) 
* clean py-ci-sdr

* [py-ci-sdr] updated copyright

* [py-ci-sdr] added upper bound for python version

Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2022-02-28 15:27:44 -06:00
Massimiliano Culpo
9b298fd7e4 Add a new test to catch exit code failure (#29244) 
* Add a new test to catch exit code failure

fixes #29226

This introduces a new unit test that checks the return
code of `spack unit-test` when it is supposed to fail.

This is to prevent bugs like the one introduced in #25601
in which CI didn't catch a missing return statement.

In retrospective it seems that the shell test we have right
now all go through `tty.die` or similar code paths which
call `sys.exit(a)` explicitly. This new test instead checks
`spack unit-test` which relies on the return code from
command invocation in case of errors.
 2022-02-28 12:55:24 -08:00
Toyohisa Kameyama
8f4e029e3a qt: Fix build with Fujitsu compiler. (#29199) 2022-02-27 22:12:36 -05:00
iarspider
d29253bd7a Add 'master' version for dmtcp (#29211) 
* Add 'develop' version for dmtcp

* Update var/spack/repos/builtin/packages/dmtcp/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-02-27 13:34:09 -06:00
iarspider
8eefab4033 New version: py-onnx 1.8.1 (#29214) 
* New version: py-onnx 1.8.1

* Update package.py
 2022-02-26 11:50:17 -06:00
Ondřej Čertík
abfd300eef libtermkey: Update to the latest release (#29229) 
And add a missing dependency.

Fixes #26672.
 2022-02-26 10:15:02 -07:00
Ondřej Čertík
dd5943bc6f libluv: update to the latest release (#29228) 
Fixes #26673.
 2022-02-26 10:11:53 -07:00
Seth R. Johnson
00ed99dc16 darwin: propagate build environment variables for Autotools (#28948) 
GraphViz has failures due to overriding the default autoconf build
environment variables.
 2022-02-26 11:19:40 -05:00
Harmen Stoppels
db2340007a openmpi: ~gpfs by default (#29218) 2022-02-25 17:51:07 -07:00
Manuela Kuhn
2610423e78 r-rlang: add 1.0.1 (#29040) 2022-02-25 18:19:57 -06:00
Manuela Kuhn
888eb11565 r-foreach: add 1.5.2 (#29062) 2022-02-25 18:19:29 -06:00
Manuela Kuhn
1cc5391443 r-cli: add 3.2.0 (#29005) 2022-02-25 18:18:31 -06:00
Scott Wittenburg
b082c33c85 commands: Propgate command return value as exit code (#29223) 2022-02-25 10:49:56 -08:00
Manuela Kuhn
d62b8f0bf3 py-jupyterlab: add 3.1.19 and 3.2.9 (#29174) 2022-02-24 23:24:13 -06:00
Kinh Nguyen
c17f8d938e r-units 0.8-0 (#29183) 2022-02-24 17:54:38 -08:00
Glenn Johnson
c6556b7a06 Adjust binutils detection (#29188) 
The `spack external find binutils` command was failing to find my system
binutils because the regex was not matching. The name of the executable
follows the string 'GNU' that I tested with three different
installations so I changed the regex to look for that. On my CentOS-7
system, the version had the RPM details so I set the version to capture
the first three parts of the version.
 2022-02-24 17:52:45 -08:00
Tim Haines
31c8567007 capstone: update URL (#29190) 
* capstone: Change GitHub URL

* capstone: Remove 'master' branch

Only the 'next' branch is used for development/release now.
 2022-02-24 17:51:28 -08:00
Harmen Stoppels
8c1e54180e disable gpfs through --with-gpfs=no (#29181) 2022-02-24 22:39:38 +01:00
Manuela Kuhn
dc01f9597e py-jedi: add 0.18.1 (#29130) 
* py-jedi: add 0.18.1

* fix py-parso version
 2022-02-24 15:09:58 -06:00
Manuela Kuhn
8f372fc88f py-jupyterlab-server: add 2.10.3 (#29172) 2022-02-24 15:07:24 -06:00
Manuela Kuhn
6cc2e7bcd4 py-ipython: add 8.0.1 (#29175) 2022-02-24 15:04:28 -06:00
Manuela Kuhn
d7b9ad6456 py-lxml: add 4.8.0 (#29184) 2022-02-24 14:57:29 -06:00
Seth R. Johnson
ceea479b56 vecgeom: add patch for @1.1.18 +cuda (#29185) 2022-02-24 09:34:42 -07:00
Harmen Stoppels
8bd9527a71 mpich: add pmi=cray support (#29160) 
* mpich: add pmi=cray support

After marking `cray-pmi` as external:

```yaml
packages:
  cray-pmi:
    externals:
    - spec: cray-pmi@5.0.17
      prefix: /opt/cray/pe/pmi/5.0.17
```

You can now install

```
spack install something ^mpich pmi=cray
```

and

```console
srun $(spack location -i something)/bin/your_app
```
 2022-02-24 16:35:01 +01:00
Manuela Kuhn
205e9f7d73 py-jupyter-client: add 7.1.2 (#29135) 2022-02-24 05:18:18 -07:00
Manuela Kuhn
a8b1fbde41 py-jupyter-core: add 4.9.2 (#29134) 2022-02-24 05:17:56 -07:00
Manuela Kuhn
3243731c1c py-jupyter-server: add 1.13.5 (#29145) 2022-02-24 04:32:52 -07:00
Manuela Kuhn
0ed94f9529 py-json5: add 0.9.6 (#29133) 2022-02-24 04:23:44 -07:00
Manuela Kuhn
96236f229f py-joblib: add 1.1.0 (#29131) 2022-02-24 03:11:47 -07:00
QuellynSnead
dccc58c0ad netlib-lapack: apply ibm-xl-3.9.1 patch to cce (#28812) 2022-02-24 10:55:35 +01:00
Diego Alvarez
2e0cf6f9ee nextflow: add v21.10.6 (#29164) 2022-02-24 10:54:14 +01:00
Carlos Bederián
b2a0b6d6c3 freeglut: add 3.2.2 (#29165) 2022-02-24 10:53:25 +01:00