Commit Graph

9 Commits

Author SHA1 Message Date
Todd Gamblin
54f97d1dec
Update copyright on LLNL files for 2018. (#7592) 2018-03-24 12:13:52 -07:00
Eric
c3b003e698 bamtools: Add version 2.5.1 (#6770) 2018-01-02 10:55:07 -08:00
Eric
6968777af7 bamtools: Add version 2.5.0 (#6553) 2017-12-04 10:38:30 -07:00
Todd Gamblin
05fa302655
Replace github.com/llnl/spack with github.com/spack/spack (#6142)
We moved to a new GitHub org! Now make the code and docs reflect that.
2017-11-04 17:08:04 -07:00
Michael Kuhn
84ae7872d3 Update copyright notices for 2017 (#5295) 2017-09-06 17:44:16 -10:00
Todd Gamblin
cac4362f64 Make LICENSE recognizable by GitHub. (#4598) 2017-06-24 22:22:55 -07:00
Barry Britt
c0a52cc59e Updating bamtools to include a dependency for zlib. (#4031)
* Updating bamtools to include a dependency for zlib.

In a standard compile, bamtools will fail if zlib headers are not installed on the target machine. In order to maintain compatibility with all systems -- and since zlib is included already as a dependency for cmake -- this patch adds zlib as a link dependency for the bamtools package.

* Modified cmake rpath include.

Bamtools has a non-standard library location, so we need to append $prefix/lib/bamtools to the rpath. Not sure there's a better way to do this...

* Fixing syntax error in package.py

Fixed a non-terminated parenthesis on line 46.

* Updated bamtools to be a CMakePackage

Removed extraneous code, and altered the package to extend cmake_args
including the non-standard library location.

* UpRemoving cmake dependency and removing blank line from end of file

* Updates to cmake_args.

Removed the duplicate definition of std_cmake_args in favor of simply overriding the CMAKE_INSTALL_RPATH variable that is provided. This should allow the package to be linked correctly to itself.
2017-05-06 12:05:12 -05:00
健美猫
7511c9cd1a Add a new version for bamtools 2.4.1. (#3328) 2017-03-03 07:58:41 -06:00
George Hartzell
db0baaafe3 Add package for bamtools (#1571)
bamtools provides a C++ API & command-line toolkit for working with BAM
data.
2016-09-21 04:22:55 -07:00