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dcd2f8a4ed
Commit Graph

20142 Commits

Author SHA1 Message Date
Harmen Stoppels
dcd2f8a4ed
ucx: overhaul package recipe (#30215) 
- hyphens to underscore in variant names (e.g. `~ib_hw_tm` instead of `~ib-hw-tm`)
- disable docs, disable go, drop the unused `doc` variant
- `+static +shared` => `libs=static,shared`
- `vfs` support (add libfuse@3: dep)
- fix `backtrace_detail` for UCX 1.12+ (`--enable-backtrace-detail` => `--with-bfd`)
- group variants and sort
 2022-05-05 15:07:34 +02:00
Valentin Volkl
381ec8abac
baurmc: add new package (#30245) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-05-05 13:30:45 +02:00
Jennifer Green
fd6d226524
git: adding subtree support, post-install step, reordered deps (#30400) 2022-05-05 11:08:51 +02:00
Adam J. Stewart
cef9245ee1
LAPACK: add API compatibility versions (#29828) 2022-05-05 10:38:20 +02:00
dlkuehn
24fecdc738
rnaz: add version 2.1.1 and git repository to newest version. (#30349) 
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-05-05 10:32:41 +02:00
snehring
4a228055e2
trimmomatic: adding more flexible java dep (#30488) 2022-05-05 10:21:20 +02:00
Wouter Deconinck
17ede26cea
flatbufffers: patches are in v2.0.0 (#30492) 2022-05-05 10:14:10 +02:00
SXS Bot
8bcccbeac7
spectre: add v2022.05.05 (#30493) 
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
 2022-05-05 09:49:25 +02:00
Seth R. Johnson
a5d06325e7
qt: fix ~opengl and use_spack_dep (#30487) 2022-05-04 22:41:37 -04:00
Dan Bonachea
9bb23a7f46
UPC++: minor packaging improvements (#30482) 
* upcxx: Add `spack external find` support

* upcxx: Minor tweaks to Shasta support
 2022-05-04 15:27:21 -07:00
Andrea Valenzuela
5a434cb840
Add scitokens-cpp recipe and also as a variant for xrootd (#30362) 
* Add scitokens-cpp recipe

* Add scitokens-cpp variant in xrootd

* Fix typo

* Fix flake8 style errors

* Update license date

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-05-04 13:03:50 -07:00
iarspider
0be5dea13f
Fix professor recipe (#30002) 
* [WIP] Cleanup professor dependencies

* Add dependency on ROOT
* Remove direct dependency on wxwidgets
    * `prof-I` tool requires matplotlib with wxwidgets backend, made that optional

* Update package.py

* Update package.py (#38)

* Update package.py

* Update package.py
 2022-05-04 11:19:43 -07:00
David
b6f2a70f7b
Update gtk-doc depends for tce findings (#30337) 
gtk-doc can call pkg-config when used at runtime, so pkgconfig needs
to be a runtime requirement.

itstool needs to be a build-time requirement.
 2022-05-04 11:17:34 -07:00
Olivier Cessenat
0d3d1ea7d0
gxsview: vtk9 no longer builds libvtkjpeg... (#30340) 2022-05-04 11:12:49 -07:00
Andrea Valenzuela
39c4a66e5b
Add checksum for py-prompt-toolkit@3.0.29 (#30330) 
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
 2022-05-04 11:53:53 -06:00
Carlos Bederián
0bd0ba53a3
curl: tls=mbedtls requires fPIC (#30447) 2022-05-04 10:53:33 -07:00
snehring
e24373f262
gatk: updating and expanding java dependency (#30476) 2022-05-04 17:51:44 +00:00
Adam J. Stewart
b7f33fb393
Python package: add backup BINDIR setting (#30408) 2022-05-04 10:50:18 -07:00
Chuck Atkins
250d5d2c00
qt: Assimp dependency specificationa is more nuanced (#30460) 
libassimp has been a dependency for all of 5.x but expressing that has
varied significantly throughout the 5.x lifecycle:

  v5.0:  qt3d uses internal-only libassimp
  v5.5:  external-only libassimp
  v5.6:  either internal or external libassimp via autodetection
  v5.9:  user-selectable internal-vs-external via -assimp
  v5.14: additional qtquick3d module uses -assimp
  v5.15: qtquick3d switches to the -quick3d-assimp option
    * current bug where the incorrect target is setup
 2022-05-04 13:30:15 -04:00
Adam J. Stewart
8bf988abb9
GDAL: add v3.4.3 (#30474) 2022-05-04 16:34:17 +00:00
Bitllion
aab7dcaad9
add package: abacus (#30416) 
* add pacakge: abacus

* rename

* fix some style bugs

* update package:abacus

* fix some style bugs

* format code

* Delete a line of useless comments

* updatee abacus
 2022-05-04 09:29:08 -07:00
Mikael Simberg
5b68fa1ecb
Add mimalloc package with use in HPX and pika (#30457) 
* Add mimalloc package

* Add mimalloc as allocator option to pika

* Add mimalloc as allocator option to hpx

* Set git property globally instead of per-version in pika, hpx, and mimalloc packages

Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
 2022-05-04 09:19:15 -07:00
acastanedam
4d03a2768e
gpi-2_fix_deps: setup 'gawk' and 'sed' dependencies (#29740) 
Strictly, `sed` is a `build` and `run` dependency in all gpi-2
versions, whereas `gawk` is a `run` (`build` and `run`) dependency for
gpi-2 versions greater or equal (less) than 1.4.0
 2022-05-04 09:14:21 -07:00
Andrea Valenzuela
6702e87ee4
Add checksum for version 1.1.13 and update dependencies (#30470) 2022-05-04 10:08:43 -05:00
fpruvost
7ad5ca2cc3
chameleon: add maintainers information (#30472) 2022-05-04 08:57:44 -06:00
Auriane R
2418cfb79b
pika: Add 0.4.0 release (#30469) 2022-05-04 16:29:30 +02:00
Ross Miller
9486c76d70
Use gccgo to bootstrap go on aarch64 (#30350) 
The go-bootstrap package doesn't work on aarch64 platforms, so the only way
to build Go is to use gccgo.

Also, some versions of gccgo have a bug that prevents them from compiling
go (see golang/go#47771), so this patch limits gcc to versions newer than
10.4.0 or 11.3.0.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-05-04 16:16:53 +02:00
fpruvost
dc99fe98b9
chameleon: add new package (#30368) 2022-05-04 08:09:54 -06:00
Andrea Valenzuela
cb97b25646
Add checksum for py-plac@1.3.5 (#30327) 
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
 2022-05-04 08:06:11 -06:00
Andrea Valenzuela
a84593a510
Add checksum for py-networkx@2.7.1 and fix python dependency (#30326) 
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
 2022-05-04 08:05:51 -06:00
Paul Ferrell
2f6556ea82
mesa: intel needs c99 standard specified under intel. (#30334) 2022-05-04 14:21:25 +02:00
snehring
b4213b2c60
maq: adding perl dep, addressing gcc errors (#30312) 2022-05-04 14:07:02 +02:00
lpoirel
e378d96d15
namd: place an upper bound on the charmpp dependency version (#30397) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-05-04 13:58:25 +02:00
Axel Huebl
715686f0ec
WarpX: add v22.05 (#30467) 
Update `warpx` & `py-warpx` to the latest release, `22.05`.
 2022-05-04 00:57:42 -06:00
snehring
d0fdaf6d03
igv: changing to 'all platforms' version. Adding igvtools variant. (#30379) 2022-05-04 08:29:06 +02:00
Adam J. Stewart
b8ebaa0813
py-shapely: add v1.8.2 (#30466) 2022-05-04 07:43:52 +02:00
eugeneswalker
96f9a1d88b
boost: fix v1.78 build with oneapi (#30463) 2022-05-03 23:29:37 -06:00
Carlos Bederián
f5eb9fb501
autodock-vina: add versions up to v1.2.3, fixes (#30443) 
* C++ package, use spack_cxx
* download from github, add 1.2.x versions
* remove patches already present in 1.1.2-boost-new release
* specify boost dependencies
 2022-05-04 06:24:15 +02:00
Paul Ferrell
dd8f533e97
paraview: add LANL/TCE used variants for Paraview (#30336) 
- Added +eyedomelighting
- Added +pagosa
- Added +fortran
- Added pandas dependency and min version
 2022-05-04 06:18:35 +02:00
Glenn Johnson
bab41de538
ncl: constrain hdf5 dependency to version 1.10 (#29607) 2022-05-03 23:11:34 -05:00
Harsh Bhatia
17c1808ef7
new package: py-pytaridx (#30444) 
* new package: pytaridx

* fixed copyright year

* Update git link

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* added type in python depends

* added pypi link

* Update package.py

* Update package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-05-03 23:10:49 -05:00
snehring
157ee3458f
ea-utils: new version, cleanup, and newer gcc compat (#30204) 2022-05-04 06:06:59 +02:00
Ethan Stam
281165693a
ParaView: let paraview build its own verdict tpl (#30332) 2022-05-04 06:03:52 +02:00
eugeneswalker
f8653dfb9b
mesa@22: gallium-xlib -> xlib (#30465) 2022-05-04 05:53:09 +02:00
Frank Willmore
a6589daa87
Vacuumms 1.1.1 (#30458) 
* adding updated package for vacuumms

* deprecating old version

* add link to DOI

* style: trailing whitespace

* Update var/spack/repos/builtin/packages/vacuumms/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-05-03 19:13:43 -06:00
Richard Berger
43a503c195
flcl: add new versions (#30363) 
* flcl: add new versions

* Update var/spack/repos/builtin/packages/flcl/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/flcl/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-05-03 19:01:32 -06:00
Keita Iwabuchi
1eff83990b
Metall Package: add v0.20 (#30446) 
* Metall package: add dependency to GCC for build test

* Package Metall: add v.017

* Package Metall: update the package file

* Update var/spack/repos/builtin/packages/metall/package.py

Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>

* Metall package: add v0.18 and v0.19

* Metall Package: add v0.20

Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
 2022-05-03 16:46:04 -07:00
Lucas Frérot
17e71a675a
tamaas: new package (#30449) 
* tamaas: added new package

* tamaas: passing dependency prefixes to build

* tamaas: Python 3.7 dependency

* tamaas: compiler conflicts and correct ~python

* tamaas: no newline in docstring

* tamaas: correct python build dep. when ~python
 2022-05-03 16:17:17 -07:00
Adam J. Stewart
872aa32a00
py-matplotlib: add v3.5.2 (#30459) 2022-05-03 17:06:04 -06:00
Ken Raffenetti
4c19410669
mpich: add datatype engine variant (#30257) 
Starting with MPICH 3.4, we offer different datatype engine options
(dataloop or yaksa). The default is 'auto', which will choose based on
the device configuration. Starting with MPICH 4.0, building against an
external yaksa library is supported.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2022-05-03 22:12:19 +02:00