Commit Graph

13864 Commits

Author SHA1 Message Date
Jim Huang
e5b03770ed
SS2NEON transition to new repository; update headers and patch (#20647) 2021-01-04 18:45:47 -08:00
mic84
ad29f2148e
amrex: new version 21.01 (#20659) 2021-01-04 18:41:06 -08:00
Stephanie Brink
dec98ed754
py-hatchet: added latest versions up to 1.3.0 (#20667) 2021-01-04 18:38:44 -08:00
Peter Scheibel
22a45e010a
Bugfix: Support old installations using Cray MPICH (#20663)
#20076 moved Cray-specific MPICH support from the Spack MPICH package
to a new cray-mpich Package. This broke existing package installs
using external mpich on Cray systems. This PR keeps the cray-mpich
package but restores the Cray-specific MPICH support for older
installations.

In the future this support should be removed from the Spack mpich
package and users should be directed to use cray-mpich on Cray.
2021-01-04 17:19:08 -08:00
Sreenivasa Murthy Kolam
f4acf74091
bump up rocm math libs recipes for rocm-4.0.0 release (#20651) 2021-01-05 00:02:03 +01:00
Rémi Lacroix
39b77e1b39
r-codetools: Update package (#20626) 2021-01-04 14:46:47 -08:00
Mark W. Krentel
735d5c3769
libunwind: add version 1.5.0 (#20632)
Add version 1.5.0, remove 1.4-rc1 (use 1.4.0) and 1.5-rc1 (use 1.5.0).
2021-01-04 14:37:52 -08:00
Fabian Brandt
0c6641abd0
Update libnetworkit, py-networkit to 8.0 (#20478) 2021-01-04 16:14:06 -06:00
yellowhat
4dd6ba44f2
fftw: bump to 3.3.9 (#20634) 2021-01-04 23:01:42 +01:00
Dave Love
11dd7ffad6
Add procenv (#20121)
* Add procenv

* procenv: Only buildrequire check

* procenv:  Patch for gcc 10

* procenv:  Add omitted patch

* Indent doc string
2021-01-04 22:08:54 +01:00
darmac
1b33008705
libthai: new package at v0.1.28 (#19916) 2021-01-04 17:36:12 +01:00
Sreenivasa Murthy Kolam
c9e6a4d18b
Bumpup version for rocm 4.0.0 release (#20640) 2021-01-04 17:16:26 +01:00
Sreenivasa Murthy Kolam
efb1e19339
bumpup version for rocm stage1 recipes for rocm-4.0.0 release (#20635) 2021-01-04 17:06:44 +01:00
Rémi Lacroix
47998b3f47
Libnsl: added v1.3.0 and v1.1.0. (#20645) 2021-01-04 16:34:42 +01:00
Rémi Lacroix
573d2ce2e1
Plumed: added v2.7.0. (#20646) 2021-01-04 16:34:09 +01:00
Axel Huebl
a3fb8e55d5
openPMD-api: 0.13.0 (#20648)
Add the latest release of openPMD-api.

Remove a selection of unsupported, pre-beta releases.
2021-01-04 16:29:46 +01:00
Tomoyasu Nojiri
a5611e0466
exciting: fix build on aarch64 (#20505) 2021-01-04 16:26:18 +01:00
Tomoyasu Nojiri
4c23d99e7d
fdupes: Add pcre2 depend (#20466)
* fdupes: Add pcre2 depend

* fdupes: Fix depend for pcre2
2021-01-04 10:12:13 +01:00
darmac
221e680e2b
Add new package: xfsdump (#19914)
* Add new package: xfsdump

* fix Description and Homepage
2021-01-03 11:20:57 -06:00
darmac
5d1bcf67cf
Add new package: py-holland (#19924)
* Add new package: py-holland

* rename py-holland to py-holland-backup

* fix dependencies
2021-01-03 11:07:37 -06:00
Sajid Ali
d685e47fb7
bump py-h5py (#20482)
* rebase and fix merge conflict

* address reviewer comments

* rework dependency handling as per reviewer comments

* incorporate reviewer feedback

* incorporate reviewer feedback

* fix phases

* address reviewer comments

* minor
2021-01-02 17:32:36 -06:00
Todd Gamblin
a8ccb8e116 copyrights: update all files with license headers for 2021
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
      `spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
      for oneapi.py
2021-01-02 12:12:00 -08:00
Tom Payerle
a1cf000655
hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5) (#20274)
* hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5)

* hdf-eos5: flake8 fixes

* hdf-eos5: trying to fix flake8 errors

* hdf-eos5: flake8 fix

* hdf-eos5: Fix to support Fortran codes

The -Df2cFortran compilation flag needed to support Fortran
2020-12-30 17:55:29 -06:00
Tom Payerle
a30ba0b836
hdf-eos2: new package (HDF for Earth Observing System using hdf5) (#20275)
* hdf-eos2: new package (HDF for Earth Observing System using hdf5)

* hdf-eos2: flake8 fixes

* hdf-eos2: fix to support Fortran

Need the compilation flag -Df2cFortran to allow support for Fortran
codes
2020-12-30 17:54:55 -06:00
Adam J. Stewart
0d95fd6d52
extends: add type kwarg (#20045)
* extends: add type kwarg

* Flake8 fix
2020-12-30 11:09:58 -06:00
eugeneswalker
717b653bdd
nalu-wind: add variant to build wind-utils (#20587) 2020-12-30 11:07:43 -06:00
Adam J. Stewart
5964cb49d9
Use system libuuid on macOS (#20608) 2020-12-30 10:13:34 -06:00
Adam J. Stewart
a4accff266
PythonPackage: url -> pypi (#20610)
* Convert all `url` attributes in `PythonPackage`s to `pypi` attributes
* add `pypi =` to flake8 exceptions
2020-12-29 16:44:04 -08:00
Michael Kuhn
c22141f444
Introduce virtual provider uuid (#18322)
libuuid is currently contained in util-linux, libuuid and uuid. This
change introduces a new virtual provider `uuid` and renames the existing
`uuid` package to `ossp-uuid`.

util-linux's libuuid is provided in the form of a separate package
util-linux-uuid to make sure that packages depending on uuid and
util-linux can use a separate uuid implementation, which the concretizer
does not allow if libuuid is contained in util-linux.
2020-12-29 10:12:26 -06:00
Adam J. Stewart
b421080c03
GDB: Better Python debugging support (#20486)
* GDB: Better Python debugging support

* Auto-load safe path

* Use gdbinit instead
2020-12-29 10:04:58 -06:00
Adam J. Stewart
8f92970714
py-geoplot: add new package at v0.4.1 (#20603) 2020-12-29 11:56:24 +01:00
Adam J. Stewart
03844b581a
OpenVSLAM: add new package (#20389) 2020-12-29 11:18:34 +01:00
Adam J. Stewart
50e9501124
py-contextily: add new package at v1.0.1 (#20602) 2020-12-29 11:17:24 +01:00
Yang Zongze
d41bb54729
automake: fix shebang substitution for v1.16.3 and later (#20579) 2020-12-29 11:16:34 +01:00
Adam J. Stewart
8babd5345f
py-geopy: add new package at v2.1.0 (#20601) 2020-12-29 09:11:12 +01:00
Adam J. Stewart
05f8e08067
PythonPackage: add pypi attribute to infer homepage/url/list_url (#17587) 2020-12-29 09:03:08 +01:00
John Wohlbier
76d23d9ee4
squashfs: fix build with GCC 10 (#20592) 2020-12-29 08:46:00 +01:00
Adam J. Stewart
e62676b245
Fix deptypes for some geospatial Python packages (#20593) 2020-12-29 08:40:23 +01:00
Adam J. Stewart
08ba1148e2
py-pygeos: add new package at v0.8 (#20594) 2020-12-29 08:39:45 +01:00
Glenn Johnson
747f7decc4
fsl: updated package, added v6.0.4 (#20201)
- added several patches
- added some missing dependencies
- remove unneeded dependencies
- add CUDA support
- disable queue support, which was limited, and broken anyway
- move package text that was specific to the package to a comment, so it
  does not show up the environment module
- set conflicts for cuda and compilers

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-12-29 08:27:26 +01:00
Adam J. Stewart
6c9272677b
py-cartopy: specify where deps are found (#20597) 2020-12-29 08:04:13 +01:00
Adam J. Stewart
a13b9d8a7d
py-geographiclib: add new package at v1.50 (#20600) 2020-12-29 07:57:59 +01:00
Adam J. Stewart
89262fbd23
py-mercantile: add new package at v1.1.6 (#20598) 2020-12-29 07:56:56 +01:00
Adam J. Stewart
f1a4810ac7
py-mapclassify: add new package at v2.4.2 (#20599) 2020-12-29 07:56:21 +01:00
Michael Kuhn
49b5ce954a
python: add 3.8.7 and 3.9.1 (#20589) 2020-12-28 16:21:20 -06:00
Ryan Mast
1e971b62de
libarchive: add version 3.5.1 (#20586) 2020-12-28 22:48:20 +01:00
Rémi Lacroix
8919226dc6
Update OpenMPI package (#20492)
* OpenMPI: Add version 4.1.0

* OpenMPI: Prefer version 4.0.5.

* OpenMPI: Update links

The download links changed, there is currently a redirection but it might not work forever. The website also switched to https.
2020-12-28 10:56:15 -06:00
perrymil
22e8672394
nvtop: new package at v1.1.0 (#20272) 2020-12-28 17:43:36 +01:00
Adam J. Stewart
808f55fa1f
minizip: fix build with Apple Clang 12 (#20554) 2020-12-28 08:43:37 -06:00
Tomoyasu Nojiri
7f997f82c2
sionlib: fix for aarch64 (#20525) 2020-12-28 15:21:49 +01:00