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Author SHA1 Message Date
Adam J. Stewart
e68a17f2c6 Bazel: fix patching of 4.2.4 (#42938) 2024-03-02 10:29:18 -08:00
Brian Vanderwende
4af9ec3d8a Add ncvis package and add option to wxwidgets (#38204) 
* Add ncvis and opengl option for wxwidgets

* Style fixes for ncvis

* Replace in with satisfies for opengl constraint

Co-authored-by: Alec Scott <alec@bcs.sh>

---------

Co-authored-by: Alec Scott <alec@bcs.sh>
 2024-03-02 10:26:36 -08:00
Zachary Newell
eb90e2c894 Added NCCL version 2.20.3-1 (#42951) 
Added NCCL version 2.20.3-1 to the package.py. I tested compiling it and running nccl-tests on Ubuntu 22.04.
 2024-03-02 06:59:17 -06:00
Mosè Giordano
763f444d63 py-numba: add tbb variant (#42930) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2024-03-01 02:03:39 -07:00
Chris Marsh
6614c4322d Seacas: fix patch hash (#42934) 2024-03-01 01:48:36 -07:00
Chris Marsh
983422facf libogg does not build a shared libary with cmake (#42877) 
* when built with cmake, libogg does not build with a shared libary by default. This resolves that

* spack style fixes

* Clean up imports

* enforce +pic when +shared
 2024-02-29 21:12:27 -06:00
Ye Luo
d0bdd66238 Add Quantum ESPRESSO 7.3.1 (#42927) 2024-02-29 20:08:25 -07:00
Tim Fuller
3a50d32299 Show extension commands with spack -h (#41726) 
* Execute `args.help` after setting main options so that extension commands will show with `spack -h`

---------

Co-authored-by: psakievich <psakiev@sandia.gov>
 2024-02-29 16:51:42 -08:00
psakievich
50ee3624c0 Support environment variable expansion inside module projections (#42917) 2024-02-29 16:49:37 -08:00
afzpatel
2840cb54b5 initial commit to fix ck gpu targets cmake arg (#42924) 2024-02-29 15:48:07 -06:00
eugeneswalker
5c482d0d7e reduce size of e4s to deal with large rebuild artifact (#42884) 2024-02-29 13:44:01 -07:00
joscot-linaro
f3ad990b55 linaro-forge: added 23.1.2 version (#42922) 2024-02-29 12:28:03 -08:00
Victoria Cherkas
977603cd96 Update fdb package.py with libs (#42874) 
* Update fdb package.py with libs
* Formatting
 2024-02-29 12:23:37 -08:00
Wanlin Wang
1f919255fd Update riscv-gnu-toolchain package.py (#42893) 
* Update package.py
  1. add one compiler type named 'musl'
  2. add a variant name 'multilib'
  3. add a variant name 'cmodel'
* Added one compiler type named 'musl'.
  Added a variant named 'multilib'.
  Added a variant named 'cmodel'.
  Added several versions.
* aarch64 is not supported.
 2024-02-29 12:11:40 -08:00
Adam J. Stewart
5140a9b6a3 py-keras: add v3.0.5 (#42697) 2024-02-29 17:56:03 +01:00
Chris Marsh
1732ad0af4 vtk: Update proj dependency (#42797) 
* Update proj dependency to enable newer proj usage

* Allow for any proj version
 2024-02-29 06:07:21 -08:00
dependabot[bot]
e7510ae292 build(deps): bump docker/setup-buildx-action from 3.0.0 to 3.1.0 (#42883) 
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/docker/setup-buildx-action/releases)
- [Commits](f95db51fdd...0d103c3126)

---
updated-dependencies:
- dependency-name: docker/setup-buildx-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-02-29 14:48:24 +01:00
Harmen Stoppels
0c224ba4a7 libevent: remove autotools build deps again (#42908) 
The deps were added in #40945 to make it work on macOS 11, because the
old configure scripts only detect macOS 10. Apparently people reported the
autoreconf script caused issues, later fixed in #41057. However, also
with that fix, things are incorrect, cause people now report:

```
libtool: You should recreate aclocal.m4 with macros from libtool 2.4.7
libtool: and run autoconf again.
```

HOWEVER, all this is unnecessary, because the underlying issue was
already fixed long ago, it's just that it regressed at some point, but
it's back in place since #41205.
 2024-02-29 09:57:21 +01:00
Terry Cojean
86b4a867ef ginkgo: add PAPI SDE support (#39425) 
Signed-off-by: Terry Cojean <terry.cojean@kit.edu>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2024-02-29 06:04:34 +01:00
Arne Becker
6049e5f6eb perl-readonly-xs: new package (#42897) 
This adds Readonly::XS. Since this module can not be used by itself, the
Spack package comes with a test override. This anticipates that the perl
builder will one day have a generic standalone module usage test.
 2024-02-28 14:27:22 -08:00
Arne Becker
0339690a59 perl-test-json, perl-json-any: New packages (#42896) 
* perl-test-json: New package
  Adds Test::JSON
* Adds perl-json-any
 2024-02-28 14:25:34 -08:00
Arne Becker
2bae1b7e00 perl-test-xpath: New package (#42895) 
Adds Test::XPath
 2024-02-28 14:23:41 -08:00
Arne Becker
ae5b605f99 perl-uri-find: New package (#42894) 
Adds URI::Find
 2024-02-28 14:22:19 -08:00
Arne Becker
35898d94d2 perl-net-cidr-lite: new package (#42898) 
* perl-net-cidr-lite: new package
   Adds Net::CIDR::Lite
* Add license
 2024-02-28 14:20:52 -08:00
Arne Becker
7e00bd5014 perl-mojolicious: new package (#42899) 
Adds Mojolicious
 2024-02-28 14:16:36 -08:00
Arne Becker
1f3aefb0a3 perl-cache-memcached and deps: new packages (#42911) 
Adds Cache::Memcached and its dependencies.
Installed OK with build-time tests. Added dependencies:
- Cache::Memcached
 2024-02-28 14:02:38 -08:00
Harmen Stoppels
d4601d0e53 Unit tests: skip tests that intermittently fail on Windows (#42909) 2024-02-28 14:00:09 -08:00
Tom Payerle
935660e3d5 mysql: explicity cast python command to str in _fix_dtrace_shebang() (#40781) 
This should fix issue #40780

We explicitly cast self.spec["python"].command to str in the filter_file
call in _fix_dtrace_shebang to avoid the error
==> Error: TypeError: expected str, bytes or os.PathLike object, not Executable

Not sure why the error is appearing (is it only for specific python versions, etc?),
but the fix should be quite safe.
 2024-02-28 13:00:51 -08:00
Alec Scott
17bfc41841 bison: remove unnessisary deps, add variant for colored output (#42209) 2024-02-28 12:32:40 -08:00
Arne Becker
49b38e3a78 perl-yaml-syck: New package (#42892) 
Adds YAML::Syck
 2024-02-28 12:26:09 -08:00
Arne Becker
66f078ff84 perl-catalyst-runtime and deps: new packages (#42886) 
* perl-catalyst-runtime and deps: new packages
  This add Perl Catalyst::Runtime and its missing dependencies.
  Adds:
  - perl-catalyst-runtime
  - perl-apache-logformat-compiler
  - perl-cgi-simple
  - perl-cgi-struct
  - perl-class-c3-adopt-next
  - perl-cookie-baker
  - perl-data-dump
  - perl-devel-stacktrace-ashtml
  - perl-filesys-notify-simple
  - perl-getopt-long-descriptive
  - perl-hash-multivalue
  - perl-http-body
  - perl-http-entity-parser
  - perl-http-headers-fast
  - perl-http-multipartparser
  - perl-moosex-emulate-class-accessor-fast
  - perl-moosex-getopt
  - perl-moosex-methodattributes
  - perl-moosex-role-parameterized
  - perl-path-class
  - perl-plack
  - perl-plack-middleware-fixmissingbodyinredirect
  - perl-plack-middleware-methodoverride
  - perl-plack-middleware-removeredundantbody
  - perl-plack-middleware-reverseproxy
  - perl-plack-test-externalserver
  - perl-posix-strftime-compiler
  - perl-stream-buffered
  - perl-string-rewriteprefix
  - perl-test-mocktime
  - perl-test-tcp
  - perl-test-time
  - perl-test-trap
  - perl-tree-simple
  - perl-tree-simple-visitorfactory
  - perl-uri-ws
  - perl-www-form-urlencoded
 2024-02-28 12:17:45 -08:00
AMD Toolchain Support
304a63507a AOCC: add v4.2.0 (#42891) 
Co-authored-by: vijay kallesh <Vijay-teekinavar.Kallesh@amd.com>
 2024-02-28 20:24:57 +01:00
Jonas Eschle
c7afc0eb5f Upgrade TensorFlow Probability with newer versions (#42673) 
* enh: add newer versions

* enh: add newer versions

* format

* fix typo

* Update package.py

* make jax and TF optional dependencies

* style fix

* remove dependency

* remove old TFP version

* fix:  style
 2024-02-28 12:29:23 -06:00
kwryankrattiger
57cde78c56 ParaView Release Candidate 5.12.0-RC3 (#42654) 2024-02-28 09:41:10 -08:00
Arne Becker
b01f6308d5 perl-json-xsand deps: new packages (#42904) 
Adds JSON::XS and its deps:
- Canary::Stability
- Types::Serialiser
 2024-02-28 09:30:46 -08:00
eugeneswalker
13709bb7b7 e4s: new packages: glvis, laghos (#42847) 
* e4s: new packages: glvis, laghos

* gl: require: osmesa

* be explicit: glvis ^llvm so that llvm-amdgpu not chosen

* glvis fails on oneapi stack due to issue 42839
 2024-02-28 09:26:53 -08:00
Harmen Stoppels
661ae1f230 versions: simplify list if union not disjoint (#42902) 
Spack merges ranges and concrete versions if they have non-empty
intersection. That is not enough for adjacent version ranges.

This commit ensures that disjoint ranges in version lists are simplified
if their union is not disjoint:

```python
"@1.0:2.0,2.1,2.2:3,4:6" # simplifies to "@1.0:6"
```
 2024-02-28 16:33:25 +01:00
Sinan
287e1039f5 package_py_systemd_python_improve (#42865) 
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
 2024-02-28 07:56:17 -06:00
Jonas Eschle
015dc4ee2e Add package zfit interface (#42666) 
* Add package zfit interface

* add maintainer

* [@spackbot] updating style on behalf of jonas-eschle

* Update package.py

* Update package.py

* Update package.py

* [@spackbot] updating style on behalf of jonas-eschle

* Update var/spack/repos/builtin/packages/py-zfit-interface/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

---------

Co-authored-by: jonas-eschle <jonas-eschle@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2024-02-28 07:52:40 -06:00
Axel Huebl
46165982b1 C-Blosc2: Fuzzer Tests (#42881) 
The fuzzer tests are a bit flaky and have linker issues on
clang. We generally only should build them in testing.
 2024-02-27 21:08:33 -07:00
eugeneswalker
c9a111946e e4s oneapi: remove outdated package preferences (#42875) 2024-02-27 14:35:06 -08:00
renjithravindrankannath
62160021c1 Adding dependency of roctracer-dev and patch in miopen-hip (#42637) 2024-02-27 14:52:47 -07:00
Tom Payerle
3290e2c189 openexr: Add custom libs property (#42274) 
Libraries for openexr are named libOpenEXR*.so, etc., so the default libs
handler in spec does not find them.

Add a custom libs property to address this.

Partial fix for #42273

Co-authored-by: payerle <payerle@users.noreply.github.com>
 2024-02-27 10:45:29 +01:00
George Young
2a9fc3452a regtools: add new package (#42852) 
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
 2024-02-27 10:44:34 +01:00
YI Zeping
2ea8a2e6ae btop: add cmake version restriction (#42835) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2024-02-27 10:08:22 +01:00
Lydéric Debusschère
fe4a4ddcf9 bazel: allow offline build of major versions 5 and 6 (#41575) 
* bazel: allow offline build of major versions 5 and 6; add variant download_data

* bazel: add maintainer LydDeb

* bazel: install offline only; remove variant download_data

* bazel: fix variable name: resource_dico --> resource_dictionary

* bazel: fix style

* bazel: fix the build of version 4

* bazel: add comment about resources

* bazel: access to resource stages with self.stage

* bazel: add except to solve AttributeError: 'Stage' object has no attribute 'resource'

---------

Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
 2024-02-27 03:03:25 -06:00
Juan Miguel Carceller
c45714fd3c delphes: use the same C++ standard as in ROOT (#42816) 
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
 2024-02-27 09:54:26 +01:00
Juan Miguel Carceller
523d12d9a8 garfieldpp: Add version 5.0 (#42817) 
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
 2024-02-27 09:54:03 +01:00
Howard Pritchard
5340e0184d Open MPI: adjust pmix dependency for 5.0.x (#42827) 
for various reasons had to advance dependency of 5.0.2 to at least
pmix 4.2.4.  5.0.1 and 5.0.0 can also build with 4.2.4 pmix or newer.

related to #42651

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2024-02-27 09:49:29 +01:00
AMD Toolchain Support
bca7698138 openfoam: add mpfr search paths (#42779) 
Co-authored-by: Branden Moore <branden.moore@amd.com>
 2024-02-27 09:37:48 +01:00