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Author SHA1 Message Date
Jen Herting
4b93323d82 New package: r-assertive-sets (#23427) 
Co-authored-by: Alex Leute <acl2809@rit.edu>
Co-authored-by: Alex C Leute <aclrc@rit.edu>
 2021-05-04 20:27:25 -05:00
Andrew W Elble
901f7c14fb py-tensorflow: continue to constrain h5py version (#23420) 
cleanup from #23386
 2021-05-04 12:52:27 -05:00
Jen Herting
16b720effb New package: py-pytorch-lightning (#23353) 
* lightning with friends

* fixed style errors in lightning

* [py-pytorch-lightning] fixed homepage

* [py-pytorch-lightning] removed release canidate version

* [py-pytorch-lightning] fixing some dependency listing issues

* [py-pytorch-lightning] removed py-pydepreciate

* [py-pytorch-lightning] more dependency cleanup

Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2021-05-04 12:51:07 -05:00
Olivier Cessenat
2d9988c5b7 moreutils: add v0.65 and xsltproc(libxslt) dependency (#23419) 2021-05-04 19:42:29 +02:00
Paul
c748f5a765 Add Go 1.16.3 and 1.15.11 (#23423) 2021-05-04 08:26:34 -07:00
Robert Cohn
4ecfe7f09e sos: add package for sandia openshmem (#23414) 2021-05-04 15:12:22 +02:00
Andrew W Elble
6714ab9b57 rust: add v1.51.0 (#23064) 2021-05-04 15:09:46 +02:00
Robert Mijakovic
e2933b5c4b python: add v3.9.5 and v3.8.10 (#23421) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-05-04 14:54:25 +02:00
Harmen Stoppels
2efcfa9de1 autoconf, bison: drop dependency on help2man (#23407) 
We don't have to rebuild their man pages
 2021-05-04 11:46:38 +02:00
Tom Payerle
da2dbac794 hdf-eos2: add support for hdf+szip (#23346) 2021-05-04 10:07:29 +02:00
Stephen Hudson
acdcdcee75 libensemble: add v0.7.2 (#23416) 2021-05-04 09:28:16 +02:00
Massimiliano Culpo
8a65bcb7c9 archspec: updated external dependency (#23311) 
Added support for Apple M1, extended support
for zen3 with more compiler flags.
 2021-05-03 22:27:37 -07:00
Massimiliano Culpo
10389b2b51 Use Python's built-in machinery to import compilers (#23290) 2021-05-03 22:26:48 -07:00
Cameron Stanavige
88b30090ef scr: new release and dependency updates (#23378) 
SCR moved to a component version some time ago, but never had a
release associated with these changes. SCR v2 is a legacy version
that is no longer being developed/supported. In preparation for an
upcoming SCR v3 release, there is now a 3.0rc1 release available to
users.
This adds the 3.0rc1 release to the spack package and deprecates the
older versions.

Additional changes include:
- Enforce using the main branches of the components when installing
scr@develop
- Enforce SCR v3 uses at least the recently released versions of each
of the components
- Use a simple `detect_scheduler()` function in an attempt to be
smarter about setting the default resource manager and not require
users to always manually provide the variant
- Add/update variants that were recently added to AXL and KVTree
components
- Fix cmake arg naming bug of setting `SCR_CONFIG_FILE`
- `SCR_ASYNC_API` is now being handled by a component and is only
needed by the legacy versions.
 2021-05-03 17:19:37 -07:00
Chris White
6394604d0a hdf5: fix typo (#23415) 2021-05-03 16:58:35 -07:00
Chris White
c7fb93b1d7 remove rocm version that was causing failures due to being a weird point in BLT's develop history (#23377) 2021-05-03 16:11:44 -07:00
Chris White
fa12ca585a HDF5: Utilize flag_handler for handling all compiler flags (#23413) 
* convert pic and compiler compat flags to flag_handler
 2021-05-03 16:10:37 -07:00
Harmen Stoppels
28ef63bc1b help2man: drop gettext dependency (#23406) 2021-05-03 18:32:41 -04:00
Michael Kuhn
21ad8d4372 cmd: improve shell support help message (#23410) 
Users sometimes set up Spack's shell support but still call `bin/spack`,
which results in the help message showing up again.
 2021-05-03 18:28:28 -04:00
Greg Sjaardema
5a747b9183 Version update, new variant (#23409) 
* Added checksum for recently released 4.8.0
* Added `enable-fsync` variant.  The `fsync` flag was added to the configuration as of version 4.1.0 and later.  Originally, it defaulted to `on`, but at version 4.3.0 and later, it was changed to default to `off` and a `enable-fsync` configuration flag was added to enable it.  

The spack package has the `--enable-fsync` specified with no way to disable for all builds of netcdf-c 4.1.0 and later.  This can cause horrendously slow I/O for certain use cases (e.g. 7 seconds with no-fsync versus 2300 seconds with fsync enabled).  With the new variant, the default build behavior matches the default of non-spack netCDF.
 2021-05-03 14:21:07 -07:00
Olivier Cessenat
6ded2c38d1 Package cube has very tight dependencies on cubelib (#23395) 2021-05-03 22:47:41 +02:00
Jen Herting
c4c090ab65 [py-fsspec] added http variant (#23404) 
* [py-fsspec] added http variant

* [py-fsspec] added conflict to enforce newer version for +http
 2021-05-03 20:42:40 +00:00
mic84
435ecce2f5 amrex: add v21.05 (#23405) 2021-05-03 18:32:54 +00:00
Olivier Cessenat
bfab03088b otf2: add v2.3 (#23400) 2021-05-03 20:27:52 +02:00
Olivier Cessenat
08f7020e0a opari2: add v2.0.6 (#23397) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-05-03 20:13:01 +02:00
eugeneswalker
977eff4db2 flecsi: fix legion dependency specification so variants actually exist (#23391) 
* flecsi: legion dependency has no variant +mpi, and +shared s.b. +shared_libs

* rename legion variant +shared_libs to +shared
 2021-05-03 20:10:56 +02:00
Keita Iwabuchi
fc06c1e08f Metall package: add v0.13 and support test (#23403) 
* Metall: add version 0.2

* Add Metall v0.3

* Update Metall package to v0.4 and v0.5.

* Metall package: add v0.6

* Metall package: add v0.7

* Metall package: add v0.8 and v0.9

* Add Metall package v0.10

* Metall package: set run_environment METALL_ROOT

* Metall package: removed blanks

* Metall package: add v0.11 and v0.12

* Metall package: change required cmake version

* Metall package: support build test

* Metall package: add v0.13

* Metall package: change to use setup_build_environment
 2021-05-03 10:40:45 -07:00
Jen Herting
01eefa7519 New package: py-torchmetrics (#23352) 
* lightning with friends

* [py-torchmetrics] added verison 0.2.0

Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2021-05-03 16:19:48 +00:00
Jen Herting
4723e426a6 New package: py-tensorflow-hub (#23034) 
* orginal version of tensorflow-hub

* [py-tensorflow-hub] updated url to pypi.io

* [py-tensorflow-hub] added version 0.12.0

* [py-tensorflow-hub] flake8

* [py-tensorflow-hub] Full package rewrite from @aweits

* [py-tensorflow-hub] added @aweits as maintainer

* [py-tensorflow-hub] flake8

* [py-tensorflow-hub] lots of join_path

* [py-tensorflow-hub] cleanup tmp_path/insttmp_path post install

* [py-tensorflow-hub] depends on setuptools

* [py-tensorflow-hub] fixing quoting

Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2021-05-03 16:04:56 +00:00
Tiziano Müller
61232796da llvm-doe: fix typo breaking "spack external find" (#23399) 
Fixes the following error when 'flang' is found on the system:

   $ ./bin/spack external find
   ==> Error: name 'compiler' is not defined
 2021-05-03 08:12:51 -07:00
Harmen Stoppels
74ed861657 Make gettext find libxml2 (#23393) 
gettext uses a test with <libxml2/libxml/someheader.h> to locate a header,
and libxml2 itself includes <libxml/otherheader.h>, so both have to be
in the include path.
 2021-05-03 08:03:35 -07:00
Harmen Stoppels
9c1c7ab6ca Use an environment variable to set the default stacktrace behavior (#23357) 2021-05-03 16:22:30 +02:00
Erik Schnetter
94f66d8ef8 silo: correct clang-related patch (#23361) 2021-05-03 16:15:44 +02:00
shanedsnyder
913bff0f67 darshan: add v3.3.0-pre2 release (#23370) 2021-05-03 15:32:33 +02:00
Harmen Stoppels
60f38291c2 ccache: add v4.2.1 and earlier, zstd support (#23039) 2021-05-03 13:18:36 +00:00
Itaru Kitayama
c39b53ffb3 neuron: add dependency on py-numpy (#23375) 2021-05-03 15:18:27 +02:00
Michael Kuhn
aa24c0de4b rocksdb: add v6.19.3 (#23384) 2021-05-03 15:16:53 +02:00
Michael Kuhn
653fbcc937 qt: add patches for gcc@11 (#23387) 2021-05-03 15:14:11 +02:00
Michael Kuhn
abd3e2bbfa cube: add v4.6 and v4.5 (#23389) 2021-05-03 15:12:09 +02:00
eugeneswalker
d0e3c28f34 arborx: kokkos hip backend is actually now called rocm (#23390) 2021-05-03 15:10:48 +02:00
Seth R. Johnson
d3d3b97616 py-hdf5: restore py-h5py~mpi ^hdf5+mpi (#23386) 
* Revert "py-tensorflow: disable h5py/hdf5 mpi variant(s) if tensorflow is ~mpi (#21955)"

This reverts commit 8071be81c4.

* Restore mpi restrictions to py-tensorflow
 2021-05-03 09:00:08 -04:00
Olivier Cessenat
f62b8077ab silo: fix zlib when using system external (#23392) 2021-05-03 08:57:27 -04:00
lpoirel
76578af912 mumps: add v5.4.0 and OpenMP support (#23143) 2021-05-03 14:46:53 +02:00
Harmen Stoppels
3ae8147dca libfuse add v2.9.9 (#23396) 2021-05-03 12:42:50 +00:00
Harmen Stoppels
3578132e76 Another binutils fix (#23337) 
* Building binutils with gold implies building ld

* add +ld to llvm to make the old concretizer happy and add +gas to gcc since that's used in the package.py

* Remove sys
 2021-05-02 23:27:43 +02:00
Hang Yan
83c46748e6 erlang: add new packages (#23362) 
Add new 23.1, 23.2, 23.3 Erlang releases.
 2021-05-02 12:56:27 -07:00
Itaru Kitayama
0250a0d4ce scalasca: Update variant releases (#23383) 
* Add 4.6

* Add Cubelib 4.6

Co-authored-by: Itaru Kitayama <itaru.kitayama@riken.jp>
 2021-05-02 10:04:18 -06:00
Erik Schnetter
3729fcdb4b gcc: Explicitly disable bootstrapping (#23360) 
We need to explicitly disable bootstrapping when `~bootstrap` since GCC bootstraps by default.
 2021-05-02 00:56:14 +02:00
Andrew W Elble
bdfdba7d73 py-horovod: fix compilation with mxnet enabled (#23369) 2021-04-30 18:55:44 -05:00
Chris White
a618594c28 BLT version lockdown (#23356) 
* lock down packages that export targets to pre-BLT 0.4.0 so that they can move forward when ready

* don't default to 0.4.0
 2021-04-30 22:57:44 +00:00