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Author SHA1 Message Date
Massimiliano Culpo
5ce926d2d1 test/packages: fixed test suite (#3236) 
It seems the tests in `packages.py` were running just because we had a specific order of execution. This should fix the problem, and make the test_suite more resilient to running order.
 2017-03-02 09:29:23 -08:00
Denis Davydov
88f97c07de fix build of 64bit PETSc and Trilinos in the same deal.II DAG (#3223) 
Declare that (i) Trilinos can be only built against 32bit Hypre
(ii) SLEPc can not be built with Arpack when 64bit indices are used
(iii) reflect those constraints in deal.II's depends_on
While there, add extra release flags for best performance.
 2017-03-02 08:16:58 -06:00
Jon Rood
8f915de610 Updating SAMRAI package with new urls and new versions (#3188) 
* Updating SAMRAI package file with new urls and new versions. Also using Spack's MPI compilers.

* Using default optimization for Samrai and setting type to build for m4 dependency.

* Adding debug variant to Samrai.

* Converting Samrai to AutotoolsPackage.
 2017-03-02 06:52:53 -06:00
healther
ffce6e1c4e add variant shared to yaml-cpp (#3254) 2017-03-01 16:36:46 -06:00
healther
20360f6727 add package py-current (#3282) 2017-03-01 15:34:04 -06:00
eklee15
8b52a87285 Add xl and spectrum mpi support for mumps (#3231) 
* Add xl and spectrum mpi support for mumps

* Incorporated Denis's comments. fPIC and if-else
 2017-03-01 15:33:41 -06:00
eklee15
4e601bb6d3 Exclude a few packages to build with xl (#3270) 2017-03-01 14:46:58 -06:00
healther
fa294a25db add version 2.2.0 to package bear (#3278) 2017-03-01 13:37:47 -06:00
healther
1ee470c37e Add package: git-review (#3088) 
* Add git-review

* Fix flake8 errors

* use PythonPackage for git-review

* added dependencies for git-review

* fix flake8

* moved url's to pypi.io based urls

* fixed flake8... again

* mostly url fixes, not tested, will do tomorrow

* flake8 fix

* changed URL for py-pysocks

* Fixed URL for pysocks

* fixed url
 2017-03-01 12:29:22 -06:00
healther
5fe96dec27 add packages vcsh (#3256) 
* add packages vcsh

* added git dependency

* added comment regarding makefile
 2017-03-01 07:51:36 -06:00
healther
6a1a2d5ec1 add package units (#3257) 
* add package units

* removed unnecessary dependency

* readded python dependency
 2017-03-01 07:51:17 -06:00
healther
2fb179f55b add package py-xmlrunner and fix unittest2 dependency (#3260) 
* add package py-xmlrunner and fix unittest2 dependency

* add setuptools dependency
 2017-03-01 07:51:05 -06:00
healther
d5884bdb78 add package py-symfit (#3264) 
* add package py-symfit

* added missing dependency

* fixed ordering of versions
 2017-03-01 07:50:54 -06:00
healther
4e433f8a03 add package py-statsmodels and py-patsy (#3265) 
* add package py-statsmodels and py-patsy

* fixed typo

* fixed urls

* removed rc version
 2017-03-01 07:50:28 -06:00
Adam J. Stewart
186d990791 pip requires setuptools during runtime (#3272) 2017-03-01 07:49:57 -06:00
Gregory Lee
ecc8f578af added urls for Intel Parallel Studio (#3220) 2017-02-28 14:57:10 -06:00
healther
37c36cf04e add package py-tqdm (#3262) 
* add package py-tqdm

* added py-setuptools dependency
 2017-02-28 13:36:32 -06:00
eklee15
bce2accb69 xl support for suite-sparse (#3226) 
* xl support for suite-sparse

* make_args.extend([
    'CFLAGS={0}'.format(self.compiler.pic_flag),
    'FFLAGS={0}'.format(self.compiler.pic_flag)
])
 2017-02-28 11:26:49 -08:00
eklee15
9be0c06b98 Patch hypre to support ppc64le (#3238) 
- Patch applies through v2.11.1
 2017-02-28 11:24:43 -08:00
healther
c32a9416ec add package py-tabulate (#3263) 
* add package py-tabulate
* added py-setuptools dependency
 2017-02-28 11:20:46 -08:00
Jean-Paul Pelteret
86276cd734 Update Adol-C to AutotoolsPackage; Change develop repository (#3246) 
The new repository for the development version points to the most
up-to-date official source for Adol-C. The previous SVN repository was
only occasionally sync'd with this repository.
 2017-02-28 13:18:40 -06:00
Thierry
315dfe0970 nfft distclean before configure patch (#3241) 2017-02-28 13:05:01 -06:00
healther
d1040b7111 add package py-sh (#3266) 
* add package py-sh

* removed constraint on py-setuptools
 2017-02-28 12:59:43 -06:00
Adam J. Stewart
c1382f9d02 Fix infinite recursion in swig build (#3249) 2017-02-28 12:58:08 -06:00
Bryce Allen
b2784f3664 add sz package (#3251) 2017-02-28 12:57:16 -06:00
healther
dee2259f3a add package py-saga-python and dependencies (#3267) 
* add package py-saga-python and dependencies

* fixed url and dependencies
 2017-02-28 12:56:36 -06:00
healther
70d0cdcd0a add package py-attrs (#3253) 2017-02-28 10:51:31 -06:00
healther
be0033ac91 add py-ranger package (#3258) 2017-02-28 10:21:06 -06:00
healther
25f10cca48 add package py-xarray (#3259) 2017-02-28 10:17:43 -06:00
healther
a43f2a49cb add version 0.29.0 to py-wheel (#3261) 2017-02-28 10:12:51 -06:00
Denis Davydov
b5b1e58843 numdiff: add 5.9.0 (#3243) 2017-02-26 08:17:17 -06:00
Eric Müller
ef55b01906 Add py-mock version 2.0.0 (#3234) 2017-02-24 08:05:49 -06:00
Eric Müller
06f366c53f Add bazel version 0.4.4 (#3233) 2017-02-24 08:05:21 -06:00
Javier
9650afd97e Fixing graphviz issue when calling spec (#3225) 2017-02-23 07:56:39 -06:00
Denis Davydov
60b7e13e1a fix py-setuptools (#3217) 2017-02-22 15:15:23 -08:00
Pramod Kumbhar
c9f705ffc2 Add SCOREC Core package for unstructured mesh simulations. (#3202) 
* Add SCOREC Core package for unstructured mesh simulations.
 2017-02-22 14:03:11 -08:00
Pramod Kumbhar
f86dcd8b4c Fix scotch build on bg-q (#3196) 
* Fix build issue #3190 on bg-q :
 - disable parallel build as it produces weired linker errors
   in cross compiling environment
 - update ldflags for bg-q as per Makefile provided Makefile.inc.ppca2_ibm_bgq
* Added note about -lpthread vs -pthread
 2017-02-22 11:04:14 -08:00
Kim Serradell
871a94ee41 Updating homepages and sources from two BSC packages (#3216) 
* Corrected extrae package homepage and url
* Corrected paraver package homepage and url
* To fix 'undefined reference to libintl_dgettext' appearing in extrae package when using binutils+libiberty
* Adding support to previous paraver version and reverting binutils changes to open another PR
 2017-02-22 11:03:25 -08:00
Todd Gamblin
539a454900 Convert Jaspert to AutotoolsPackage (#3212) 2017-02-22 09:29:34 -08:00
eklee15
52fab8fff3 Boost modification for IBM xl compiler (#3205) 
Tested with:
spack install boost@1.62.0+iostreams%xl_r^zlib%gcc^bzip2%gcc
 2017-02-21 16:40:09 -08:00
healther
177c54ecbf Add packages: mosh (#3098) 
* Add packages: mosh

Perl is a run dependency. See https://github.com/mobile-shell/mosh/wiki/Build-Instructions
 2017-02-21 09:50:06 -08:00
Javier
d49cb2734f Fixing issue wheh overwriting build_args in PythonPackage (#3200) 2017-02-21 08:04:32 -06:00
Javier
3195264546 Fix malformed py-appdirs patch (#3203) 2017-02-21 07:51:19 -06:00
healther
7827a0ff67 Default to OpenSSL 1.0 (#3100) 
* Added version 1.1 to openssl
* restore note explaining preferred=True for 1.0.2k
 2017-02-20 18:21:27 -08:00
Carlos Bederián
6681fc1a47 parallel-netcdf: use spack_cc for sequential code instead of system gcc (#3143) 2017-02-20 18:19:45 -08:00
Adam J. Stewart
d2a52d6dd6 Fix setuptools bootstrapping now that dependencies are no longer vendored (#3198) 
* Fix setuptools bootstrapping now that dependencies are no longer vendored
* Reorder patch and comments
* Use exact same patch as https://github.com/ActiveState/appdirs/pull/84
* Use exact same patch as https://sourceforge.net/p/pyparsing/patches/10/
 2017-02-20 18:09:03 -08:00
Javier
fbbcf456e9 Updating package: geant4 (#3197) 2017-02-20 17:33:32 -08:00
Adam J. Stewart
5b6d2754d9 Add MATLAB package (#2614) 
* Add MATLAB package
* Remove auto-accept license feature
 2017-02-20 16:10:06 -08:00
Adam J. Stewart
f0e99456ed Fix tab completion of directories and filenames (#3184) 2017-02-20 15:44:58 -08:00
Barry Smith
ab2d6285c4 Add installer for petsc4py and slepc4py (#3187) 
* Add installer for petsc4py and slepc4py
* @adamjstewart requested changes on this pull request; make these type=('build', 'run')
* @citibeth suggestion  Remove unneeded indirect dependencies
 2017-02-20 15:43:33 -08:00