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ef2c42a889
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2059 Commits

Author SHA1 Message Date
Barry Smith
ef2c42a889 Do not check directory layout for external packages (#2172) 
External packages do not have an spec.yaml file so don't check for it.
Without this change any time a package depends on an external package
when the new package is installed you will get the error

Install prefix exists but contains no spec.yaml

This problem has also haunted me since I started using Spack since PETSc
depends on Python and I used an external python but fortunately it
was relatively easy to debug once I could reproduce it at will.

Funded-by: IDEAS
Project: IDEAS/xSDK
Time: 1 hour
 2016-10-29 20:57:41 -07:00
Matthew Scott Krafczyk
c2d58d39dd Import dso_suffix from spack.build_environment in abi.py (#2174) 
Fixes #1845
 2016-10-29 16:47:06 -07:00
scheibelp
23683c65de Use Spec.format for token substitution in modules (#1848) 
This replaces a custom token-based substitution format with calls to
Spec.format in modules.py

This also resolves a couple issues:

- LmodModules set configuration globally instead of in its initializer
  which meant test-specific configuration was not applied
- Added support for setting hash_length=0 for LmodModules. This only
  affects the module filename and not the directory names for the
  hierarchy tokens in the path. This includes an additional unit test.
 2016-10-29 13:56:34 -07:00
Adam J. Stewart
58409a2eaf Fix rpath linking for NAG, add documentation on setup (#2142) 2016-10-27 15:28:09 -07:00
Elizabeth Fischer
12270b9dbf Remove support for deprecated package. See also #2085 and #2086 (#2090) 2016-10-26 21:53:08 -07:00
George Hartzell
bf08bd7076 Fix typo: _choiches -> _choices (#2127) 
The breaks `spack create`.
 2016-10-26 20:39:08 -07:00
George Hartzell
e652a32f05 typo: vlaues -> values (#2147) 2016-10-26 17:51:01 -07:00
Elizabeth Fischer
3895c974a0 Removed documentation on false paths as per #2083 (#2146) 
Removed documentation on false paths as per #2083
 2016-10-26 17:11:54 -07:00
Denis Davydov
9f54cea5c5 document recommended usage of system blas/lapack (#2081) 
* document recommended usage of system blas/lapack

* update doc

* minor

* reword
 2016-10-26 16:22:18 -07:00
Massimiliano Culpo
37dc719d13 ProcessError : now the exception is correctly pickled and passed across processes. (#2143) 2016-10-26 15:17:20 -07:00
Massimiliano Culpo
e73ab84680 spack install : added --log-format option (incorporates test-install command) (#2112) 
* spack install : added --log-format option (incorporates test-install command)

fixes #1907

* qa : removed extra whitespace
 2016-10-26 14:22:46 -07:00
Denis Davydov
33fb7bbd1b add a unit test for conretization with develop version (#2064) 2016-10-26 01:49:52 -07:00
Denis Davydov
39772e4c4c filter system paths (#2083) 
* add filter_system_paths()

* filter system paths in set_build_environment_variables()

* two function: lib/inc + bin

* reverse order in bin

* fix order

* minor

* improvements of the code

* more cleanup

* alternative solution for filter_bins

* fiddle base alalazo's approach

* minor

* minor
 2016-10-25 11:25:13 -07:00
Adam J. Stewart
a250792202 Find compatibility versions of GCC (#2099) 2016-10-25 11:07:49 -07:00
Massimiliano Culpo
7a575d2f4b multimethod.py : calls functools.wraps before returning the correct method fixes #2118 (#2119) 2016-10-25 08:30:40 -07:00
Massimiliano Culpo
b27e78cd78 spack setup : fixed regression after #1186 (#2117) 2016-10-25 07:53:11 -07:00
Todd Gamblin
0f6a5cd385 Merge pull request #1186 from epfl-scitas/features/install_with_phases 
do_install : allow for an arbitrary number of phases
 2016-10-24 17:13:49 -07:00
Todd Gamblin
c1ad4bde28 Rename EditableMakefile to MakefilePackage 2016-10-24 16:41:20 -07:00
Joseph Ciurej
7dd14870ce Bug Fix : Apply Compiler Flags Specified by Manual Compiler Configuration (#1532) 
* Fixed a bug causing config-specified compiler flags to be ignored.
Updated the compiler config so all flags are in a separate section.

* Updated the documentation for the `compilers.yaml` file spec.

* Implemented basic testing for the 'flags' section of compiler config.

* Fixed a few minor problems with the manual compiler config documentation.
 2016-10-24 14:37:03 -07:00
George Hartzell
e35c023c61 Typo: becuase -> because (#2110) 2016-10-24 14:28:04 -07:00
Elizabeth Fischer
4f0b7cd2c2 Small fix to docs. (#2092) 2016-10-24 11:09:02 -07:00
Massimiliano Culpo
8af9881e9b spack test : exits after ctrl+c fixes #2029 (#2082) 2016-10-24 11:07:08 -07:00
alalazo
7bd735416d package.py : moved each specialized package to its own module file 2016-10-23 22:38:19 +02:00
alalazo
e0f3188970 spack setup : improved error message 2016-10-23 19:10:07 +02:00
alalazo
fa3f07c092 CMakePackage, AutotoolsPackage : added default behavior on check 2016-10-23 19:02:46 +02:00
alalazo
ebbbed166e Merge branch 'develop' of https://github.com/LLNL/spack into features/install_with_phases_rebase 2016-10-23 13:35:12 +02:00
alalazo
284ed13fa6 spack.error : fixed pickling and representation to permit to pass FetchErrors 2016-10-23 13:34:29 +02:00
alalazo
bdf4832269 spack build, spack configure : added commands 2016-10-22 17:08:52 +02:00
alalazo
484aaf50cc CMakePackage : changed method name from wdir to build_directory 2016-10-22 14:54:26 +02:00
alalazo
8091a3d6cb do_install : use build_system_class attribute instead of type(self).__base__ 2016-10-22 10:48:16 +02:00
alalazo
c84123dce5 spack info : shows the build-system class used 2016-10-22 10:39:33 +02:00
Matthew LeGendre
859d296105 Don't clear LD_LIBRARY_PATH and friends from compiler wrappers (#2074) 
* Don't clear LD_LIBRARY_PATH and friends from compiler wrappers

* remove debugging print
 2016-10-21 16:25:12 -07:00
alalazo
482f60d1d3 packages : moved decorators into AutotoolsPackage and CMakePackage 2016-10-22 01:03:07 +02:00
alalazo
012da99644 spack create : fixed typo 2016-10-22 00:10:37 +02:00
alalazo
e8dafd1090 Removed space before colon in FIXME:, added one line description of guess classes 2016-10-21 23:54:11 +02:00
alalazo
715e029361 spack info : added phases 2016-10-21 22:44:41 +02:00
Matthew LeGendre
5ff08386af Remove unnecessary blackslash for flake8 2016-10-21 13:17:23 -07:00
alalazo
fd2b72fd0f qa : flake8 issues 2016-10-21 22:15:29 +02:00
alalazo
04821c7be8 spack create : now creates packages that are derived from AutotoolsPackage and CMakePackage 2016-10-21 22:12:21 +02:00
Matthew LeGendre
73b46a92bc Fix concretize bug where provider sort couldn't handle version ranges 2016-10-21 11:59:41 -07:00
Adam J. Stewart
52158d9316 Add new Version property to handle joined version numbers (#2062) 
* Add new version property to handle joined version numbers

* Add unit test for new joined property

* Add documentation on version.up_to() and version.joined
 2016-10-21 07:49:36 -07:00
Massimiliano Culpo
aa86432ec6 patch directive : fixed retrieval from urls ( fixes #1584 ) (#2039) 
* patch directive : fixed retrieval from urls fixes #1584

 - add support for 'gz' archives
 - fixed bugs with URL patches
 - updated nwchem

* patch directive : added checksum to UrlPatch

 - refactored classes in patch.py
 - updated nwchem

* patch directive : added caching
 2016-10-21 07:32:52 -07:00
alalazo
2251428f0a CMakePackage : changed list() to [] 2016-10-21 13:01:55 +02:00
alalazo
5ce3071143 do_install : removed install_self from the list of arguments (leftover after rebasing #1956) 2016-10-21 12:51:38 +02:00
alalazo
213e3f0860 Merge branch 'develop' of https://github.com/LLNL/spack into features/install_with_phases_rebase 
Conflicts:
	lib/spack/spack/cmd/install.py
	lib/spack/spack/cmd/setup.py
 2016-10-21 12:38:43 +02:00
scheibelp
8111a4bb9d Don't cache truncated dag hash for spec (#2048) 
If Spec.dag_hash was called for the first time with a 'length'
specified, the cached hash was truncated. This ensures that the
full hash is cached.
 2016-10-18 22:34:46 -07:00
Massimiliano Culpo
0a3cc5e8e3 Package.do_install : removed install_self from arguments (#1956) 
* Removes the extra argument from Package.do_install while maintaining the changes in behavior pulled in #1603

* install : removed -i and -d shorthands (breaks backward compatibility)

* Change ':' to ','
 2016-10-18 14:25:07 -07:00
Eric
306eea5e59 Support for bazel (#2023) 
* Add package bazel

* Add support for bazel-based builds
 2016-10-18 07:46:42 -07:00
Adam J. Stewart
d891143a08 Ignore GPG/PGP signatures/checksums when finding available downloads (#2028) 
* Ignore GPG/PGP signatures/checksums when finding available downloads

* Remove duplicated basename
 2016-10-16 14:46:29 -07:00
Todd Gamblin
193f68083f Platform-specific config scopes (#2030) 
* Add platform-specific configuration scopes.

* Update `spack config` to use the new scope arguments.
 2016-10-15 17:00:11 -07:00