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Author SHA1 Message Date
iarspider
f141f806e9 Add checksum for py-llvmlite 0.38.1 (#33096) 2022-10-07 13:31:31 -05:00
iarspider
3968263bf6 Add checksum for py-jupyter-console 6.4.4 (#33088) 2022-10-07 12:54:58 -05:00
iarspider
9de9d2f65b Add checksum for py-jsonpickle 2.2.0 (#33087) 2022-10-07 12:53:44 -05:00
Adam J. Stewart
163242bd6e py-black: add v22.10.0 (#33077) 2022-10-07 10:33:04 -07:00
eugeneswalker
35bc158387 e4s ci: add quantum-espresso (#33075) 2022-10-07 08:38:10 -07:00
Auriane R
39fe4371fa Rename p2300 to stdexec (#33099) 
* Rename p2300 package after renaming PR merged in stdexec

https://github.com/NVIDIA/stdexec/pull/622

* Adapt pika to depend on stdexec
 2022-10-07 14:54:05 +02:00
Paul Kuberry
2346544e6f trilinos and xyce: fix fortran library handling (#33033) 
* trilinos and xyce: fix fortran library handling

xyce:
  - add pymi_static_blas variant and logic
    handles blas and hdf5 conflicts for Xyce-PyMi
  - make +isorropia and +zoltan conditional on mpi

* xyce: clean up CMake options

* xyce: change pymi_static_blas to pymi_static_tpls

* xyce: made pymi_static_tpls only when +pymi
 2022-10-07 06:47:26 -04:00
iarspider
8acb4da6aa Add checksum for py-tornado 6.2, py-pyzmq 24.0.1, py-jupyter-client 7.3.5 (#33062) 2022-10-07 00:09:56 -06:00
Laurent Aphecetche
837954729f geant3: new package (#33065) 
* geant3: new package
* fix copyright
 2022-10-06 22:26:22 -06:00
MatthewLieber
23f6c92f33 add compatibility for rocky8 and rhel8 (#33068) 2022-10-07 04:25:58 +00:00
Hans Fangohr
a661536eb6 oommf: update oommf package to version 2.0b0 (#33072) 
- Official release mentioned on https://math.nist.gov/oommf/software-20.html
- Tested at https://github.com/fangohr/oommf-in-spack/pull/39/files
 2022-10-06 18:30:27 -07:00
Laurent Aphecetche
080c37046f cppgsl: add version 4.0.0 (#33060) 2022-10-06 18:24:01 -07:00
Jonas Thies
f56ff16564 phist: add patch to resolve build issue #32111 with +fortran %oneapi (#32965) 
* phist: add patch to resolve build issue #32111 with +fortran %oneapi

* phist: some lines of code were patched twice, make these patches orthogonal.
 2022-10-06 16:16:48 -07:00
Massimiliano Culpo
1a12ddbd2d Add a warning on Python 2.7 deprecation (#33052) 
Co-authored-by: alalazo <alalazo@users.noreply.github.com>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
 2022-10-06 23:42:34 +02:00
snehring
f43887dd4e ncbi-toolkit: adding version 26_0_1 (#33061) 2022-10-06 12:26:25 -07:00
Sergey Kosukhin
a520a7ef28 tcl module template: automatically unload automatically loaded modules (#32853) 
Remove `module-info mode load` condition that prevents auto-unloading when autoloading is enabled. It looks like this condition was added to work around an issue in environment-modules that is no longer necessary.

Add quotes to make is-loaded happy
 2022-10-06 20:15:28 +02:00
iarspider
c3018f95ee Add checksum for py-executing 1.0.0 (#33059) 2022-10-06 10:25:54 -06:00
iarspider
164d5fc7a4 Add checksum for py-histogrammar 1.0.31 (#33045) 2022-10-06 09:52:38 -05:00
iarspider
38b50079e1 Add checksum for py-uhi 0.3.1 (#33043) 2022-10-06 09:51:28 -05:00
iarspider
e67a19cb36 Add checksum for py-tqdm 4.64.1 (#33046) 2022-10-06 09:50:24 -05:00
iarspider
7e1cb5414c Add checksum for py-zipp@3.8.1 (#33048) 2022-10-06 09:47:56 -05:00
iarspider
5c5de3e683 Update py stack data (#33051) 
* Add checksum for py-traitlets 5.3.0

* Add checksum for py-stack-data 0.5.0

* Remove extra file
 2022-10-06 09:41:16 -05:00
Laurent Aphecetche
ca0e023c43 geant4-vmc: unset MACOSX_DEPLOYMENT_TARGET (#32828) 2022-10-06 10:41:08 -04:00
Sergey Kosukhin
70a3868168 ncl: enable building with recent versions of hdf5 (#32842) 2022-10-06 16:20:55 +02:00
iarspider
f168a44fcb Add checksum for py-urllib3 1.26.12 (#33019) 
* Add checksum for py-urllib3 1.26.12

* Update var/spack/repos/builtin/packages/py-urllib3/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fixes from review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-10-06 07:38:00 -06:00
Harmen Stoppels
c959d6c905 gmake: add 4.3.90 alpha release (#33044) 
GNU Make 4.3.90 supports jobserver through fifo, so it's nice to add the
alpha release to Spack already.
 2022-10-06 04:34:00 -06:00
Manuela Kuhn
4cfe58651a py-docutils: add 0.19 (#32814) 2022-10-06 04:29:48 -06:00
eugeneswalker
a56cd8ffb6 e4s ci: add charliecloud (#32990) 2022-10-06 12:22:23 +02:00
Sreenivasa Murthy Kolam
5cf05b6515 mlirmiopen: update the SHA for 5.2.1 release (#33049) 2022-10-06 03:54:03 -06:00
Harmen Stoppels
fc5da74998 docs: fix deprecated use of install_tree (#33004) 2022-10-06 09:45:46 +00:00
iarspider
0bc23d8bdc Add checksum for py-markupsafe 2.1.1 (#33003) 2022-10-06 03:42:01 -06:00
iarspider
5fc0bef4fc Add checksum for py-avro 1.11.1 (#32979) 2022-10-06 03:26:07 -06:00
iarspider
0184f008f1 Add checksum for py-autopep8 1.7.0, py-pycodestyle 2.9.1 (#32978) 2022-10-06 03:22:06 -06:00
Mark W. Krentel
e8dcfcd7ae hpcviewer: add v2022.10 (#33041) 2022-10-06 03:18:04 -06:00
dependabot[bot]
bfd848089f build(deps): bump actions/checkout from 3.0.2 to 3.1.0 (#32998) 2022-10-06 02:58:13 -06:00
Wouter Deconinck
887dd3fcd9 dd4hep: add v1.23 (#32968) 
Release notes at https://github.com/AIDASoft/DD4hep/releases/tag/v01-23
 2022-10-06 10:57:09 +02:00
iarspider
96daaa359d Add checksum for py-soupsieve 2.3.2.post1 (#32980) 
* Add checksum for py-soupsieve 2.3.2.post1

* Update package.py

* Update var/spack/repos/builtin/packages/py-soupsieve/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-10-06 02:53:58 -06:00
Jen Herting
1f5729644b New package: py-scanpy (#32565) 
* [py-scanpy] New package

* [py-scanpy] Added types

* [py-scan] reworked dependencies

* [py-scanpy] flake8

* [py-scanpy] update import

* [py-scanpy] fixed minor issues

Co-authored-by: James A Zilberman <jazrc@rit.edu>
 2022-10-06 10:27:37 +02:00
iarspider
aab5bcf05a Add checksum for py-histoprint 2.4.0 (#33017) 2022-10-06 02:22:00 -06:00
iarspider
0ae46519ba Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3 (#33018) 
* Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3

* Update package.py

* Update package.py

* Update package.py

* Update package.py
 2022-10-06 02:14:06 -06:00
Vanessasaurus
270a19504b flux-core: add v0.44.0 (#33039) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2022-10-06 02:10:11 -06:00
snehring
6de5f58026 dock: fix compilation with gcc10+, add dep (#33034) 2022-10-06 09:57:14 +02:00
Jean Luca Bez
33b1425add h5bench: update version (#33000) 
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-10-06 09:48:09 +02:00
Jen Herting
071c323b95 New package: py-pprintpp (#30764) 
* New package: py-pprintpp

* [py-pprintpp] added dependency on setuptools

Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
 2022-10-06 09:46:32 +02:00
Andrew W Elble
28de7da0cc cuda: add v11.8.0 (#33027) 
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
 2022-10-06 09:46:01 +02:00
Vanessasaurus
791776cece flux-sched: add v0.25.0 (#33038) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2022-10-06 09:41:15 +02:00
Chris White
9ba102c2bb add blt 0.5.2 (#33029) 2022-10-06 00:02:04 -06:00
Jen Herting
c5d62294b2 New package: py-pyassimp (#30762) 
* New package: py-pyasimp

* Cleaned up dependencies

* Fixed liked issue

* Fixed linked issue

* [py-pyassimp] depends on assimp

* [py-pyassimp] added dependency on py-setuptools

* [@spackbot] updating style on behalf of qwertos

Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
 2022-10-05 21:43:29 -05:00
Harmen Stoppels
189baa96db python: don't accidentally link to system db libs (#33007) 2022-10-05 18:22:01 -06:00
snehring
4b17d9b92e salmon: new version 1.9.0 (#33035) 2022-10-05 17:10:00 -06:00