Commit Graph

304 Commits

Author SHA1 Message Date
Harmen Stoppels
c57e2140c2
ci: dont use nightly image tag (#40070) 2023-09-19 17:53:28 +02:00
Harmen Stoppels
7d33c36a30
ci: drop redundant packages.yaml (#40068) 2023-09-19 11:47:48 +02:00
eugeneswalker
3045ed0e43
Revert "gitlab ci: temporarily disable darwin aarch64 (#39974)" (#40052)
This reverts commit 2c13361b09.
2023-09-18 12:48:32 -06:00
Scott Wittenburg
cbabdf283c
gitlab ci: submit the correct audience for protected publish jobs (#40046) 2023-09-15 20:09:18 +00:00
Scott Wittenburg
579df768ca
gitlab ci: Put Cray binaries in public mirrors (#39938) 2023-09-14 15:11:29 -06:00
Dan LaManna
6a249944f5
Add OIDC tokens to gitlab-ci jobs (#39813)
* Add OIDC tokens to gitlab-ci jobs

This should allow us to start issuing just-in-time generated
credentials for CI jobs that need to modify binary mirrors. The "aud"
claim of the token describes what the token is allowed to do. The
claim is verified against a set of rules on the IAM role using signed
information from GitLab. See spack-infrastructure for the claim
verification logic.

---------

Co-authored-by: Scott Wittenburg <scott.wittenburg@kitware.com>
2023-09-14 09:59:25 -06:00
Massimiliano Culpo
d50f296d4f
data-vis-sdk: make llvm~libomptarget the default (#40007)
Currently the configuration of the pipeline is such that
there are multiple "optimal" solutions. This is due to
the pipeline making ~lld the default for LLVM, but leaving
+libomptarget from package.py

Since LLVM recipe has a:

conflicts("~lld", "+libomptarget")

clingo is forced to change one of the two defaults, and
the penalty for doing so is the same for each. Hence, it
is random whether we'll get +libomptarget+lld
or ~libomptarget~lld.

This fixes it by changing also the default for libomptarget.
2023-09-14 09:19:47 +02:00
Harmen Stoppels
2c13361b09
gitlab ci: temporarily disable darwin aarch64 (#39974)
as there are no or few runners available
2023-09-13 11:11:33 +02:00
Scott Wittenburg
fa9acb6a98
ci: Tag reindex job to match the image architecture (#39958) 2023-09-12 16:33:56 -04:00
Tamara Dahlgren
c10ff27600
CI/Add superlu-dist to broken stand-alone tests due to hang (#38908)
* Add superlu-dist to broken stand-alone CI tests
* Revert "disable superlu test (#38894)"
  This reverts commit e16397b5d8.
2023-09-12 11:09:25 -07:00
Scott Wittenburg
516f0461b8
gitlab ci: Use image with awscli for rebuild-index job (#39636)
Instead of pointing to the image on DockerHub, which rate limits us and
causes pipeline failures durying busy times, use the version at ghcr.

And we might as well use the ghcr version everywhere else too.
2023-09-11 18:03:11 +02:00
kwryankrattiger
8ec1657136
CI Timing Statistics (#38598)
* Write timing information for installs from cache

* CI: aggregate and upload install_times.json to artifacts

* CI: Don't change root directory for artifact generation

* Flat event based timer variation

Event based timer allows for easily starting and stopping timers without
wiping sub-timer data. It also requires less branching logic when
tracking time.

The json output is non-hierarchical in this version and hierarchy is
less rigidly enforced between starting and stopping.

* Add and write timers for top level install

* Update completion

* remove unused subtimer api

* Fix unit tests

* Suppress timing summary option

* Save timers summaries to user_data artifacts

* Remove completion from fish

* Move spack python to script section

* Write timer correctly for non-cache installs

* Re-add hash to timer file

* Fish completion updates

* Fix null timer yield value

* fix type hints

* Remove timer-summary-file option

* Add "." in front of non-package timer name

---------

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-09-07 15:41:31 -05:00
Harmen Stoppels
d80bc70481
gitlab: set cache and config dir in top-level file (#39829) 2023-09-06 08:16:35 +02:00
Harmen Stoppels
5a43f4ba55
Set backtrace in ci (#39737) 2023-09-05 09:44:14 +02:00
Harmen Stoppels
acb02326aa
ASP-based solver: add hidden mode to ignore versions that are moving targets, use that in CI (#39611)
Setting the undocumented variable SPACK_CONCRETIZER_REQUIRE_CHECKSUM
now causes the solver to avoid accounting for versions that are not checksummed.

This feature is used in CI to avoid spurious concretization against e.g. develop branches.
2023-08-31 08:09:37 +00:00
kwryankrattiger
cef59ad0bf
Patch VTK to enable python 3.8 in VTK 8.2 (#38735)
* VTK: Add patch for python 3.8 support

* CI: Re-enable VisIt in CI

* Configure spec matrix for stack with VisIt

* Add pugixml dep for 8.2.0

* Make VTK and ParaView consistent on proj dep

* OpenMPI 3: provides MP support by default

* Add details on proj dep in ParaView

* Add python 3.8 to test mock repo

* Patches to get VisIt VTK interface

* CI: Disable VisIt with GUI in DAV
2023-08-28 16:56:31 -05:00
Harmen Stoppels
8a3d98b632
Remove mxnet from darwin aarch64 since theres no supported release (#39644) 2023-08-28 12:21:10 +02:00
eugeneswalker
4c7748e954
amrex+sycl: restructure constraint on %oneapi (#39451) 2023-08-16 11:49:32 -06:00
Massimiliano Culpo
9bb5cffc73 Change semantic for providers
If a possible provider is not used to satisfy a vdep,
then it's not a provider of that vdep.
2023-08-15 15:54:37 -07:00
Massimiliano Culpo
3f3c75e56a ecp-data-viz-sdk: fix building with new encoding 2023-08-15 15:54:37 -07:00
Massimiliano Culpo
9733bb3da8 We cannot require "mpich" as an mpi provider and ask for openmpi 2023-08-15 15:54:37 -07:00
eugeneswalker
ed3aaafd73
e4s cray sles ci: expand spec list (#39081)
* e4s cray sles ci: expand spec list

* flux-core: disable until python+gary-sles issue is resolved
2023-08-11 23:42:10 +00:00
Cristian Di Pietrantonio
09ca71dbe0
kokkos: rename 'std' variant to 'cxxstd'. (#39319)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-11 07:18:02 +00:00
Axel Huebl
7d444038ee
AMReX: 23.06+ Multi-Dim Support (#37695)
* AMReX: 23.06+ Multi-Dim Support

This updated the Spack package to allow to install AMReX, modules of
AMReX in E4S deployments and dependent packages with support for
multiple dimensions. Due to an upstream change in AMReX, we do not
longer need to ship three, binary incompatible package variants.

* [E4S] oneAPI AMReX < 23.06 Variant

Work-around the auto-concretization to the multi-dim of `dimensions`,
which only in 23.06+ became a multi-variant.

* e4s cray rhel ci: temporarily disable amrex build until spurious ci failure can be resolved

---------

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-08-09 11:25:43 -07:00
eugeneswalker
5d70c0f100
e4s ci: add libpressio (#34222)
* e4s ci: add libpressio

* libpressio ~cuda, +cuda: add +mgard
2023-08-08 12:03:23 -07:00
Adam J. Stewart
7327d2913a
ML CI: get more packages working on macOS (#39199) 2023-08-08 10:59:24 +02:00
kwryankrattiger
b54d286b4a
CI: remove redundant sections (#38514)
Refactor gitlab ci configs so that mac and cray jobs can reuse as much higher level
configuration as possible.

* CI: remove redundant sections
* CI: Include base linux CI configs in cray stacks

Relocation and runner mapping is consistent between cray and linux runners.

* Export user cache path in before script
* CI: add GPG root for mac runners
* Disable user configs

Metal runners share a ~ directory

* Disable user config and add configs in activate env
2023-08-07 10:23:16 -06:00
Scott Wittenburg
2c74b433aa
ci: Make signing requirement explicit (#38995)
Instead of inferring whether to sign binaries, make it explicit,
and fail rebuild jobs early if signing is required but cannot be
accomplished.
2023-07-26 09:16:15 -06:00
Scott Wittenburg
12d86ffb6a
ci: fix stack mirror urls (#38882) 2023-07-24 20:20:08 +00:00
eugeneswalker
366c798b87
e4s oneapi ci: build with latest 2023.2 based image (#39048) 2023-07-22 09:22:02 -07:00
eugeneswalker
4edeabb2a2
e4s ci: add cray-sles ministack (#38744)
* e4s ci: add cray-sles ministack

* fix typo: variables, not env
2023-07-21 05:57:27 -07:00
eugeneswalker
515b53ac50
e4s cray: expand spec list (#38947)
* e4s cray: expand spec list

* unzip: require %gcc

* remove datatrasnferkit
2023-07-18 20:04:26 +00:00
Harmen Stoppels
f30ede1ab8
ci: remove aws-ahug (#38777) 2023-07-14 10:49:57 -05:00
Harmen Stoppels
3828ae2a52
ci: populate caches in before script (#38762)
* ci: run spack list in power ci

Let's see if Spack itself is the bottleneck in CI...

* rebuild curl in CI

* more of the same please!

* drop the profiler

* undo rebuildme test in ci variant

* add comment for posterity

* enable profiling

* trigger CI

* See how it goes now that perf regressions are fixed on develop

* try shorter poll intervals

* Revert "try shorter poll intervals"

This reverts commit d60c34ad3eceead0c13a5277cf8e783fd42b7458.

* Remove spec.format call in Database._get_matching_spec_key

* once more in ci please

* undo irrelevant changes

* run spack list in before script

* test in ci

* -:

* Undo CI testing
2023-07-12 18:12:22 -05:00
Harmen Stoppels
eef14ddcad
openssl: prefer 3.x (#36729)
* openssl: prefer 3.x

This PR is not intended to be merged immediately, but it would be good
to see what packages fail to build in CI so that we can get proper
version constraints on openssl (before all packages update and support
both openssl 1 and 3)

* Disable assembly for 3.x %oneapi

* cmake: depend on spack curl, to deal with curl - openssl compat

* also make zlib external

* remove overly strict & unsafe requirement on py-cryptographty patch version number

* update openssl compat bounds in py-cryptography

* smaller diff

* Make libssh2 an autotools/cmake package

* fix weird upperbound in libssh2 as there is not openssl v2

* libssh2: pc file lists plain -lssl -lcrypto w/o leading -L flag, confusing libgit2 parsing of pkg-config output

* Actually fix the issue in libssh2: its pc file looks broken
2023-07-09 17:48:00 -04:00
Harmen Stoppels
a13687f022
Disable fortran in openblas for darwin ci, fix variant default value (#38752) 2023-07-06 17:47:20 +02:00
Harmen Stoppels
d35149d174
remove another Python 3.7 requirement & preference, since it was deprecated (#38710) 2023-07-04 20:33:47 +02:00
Stephen Sachs
a0b2ca2dde
Temporarily disable aws-pcluster pipelines (#38708) 2023-07-04 11:27:01 +02:00
Harmen Stoppels
ba7ae2c153
Drop requirement of python@3.7 since it's deprecated (#38692) 2023-07-03 16:15:32 +02:00
kwryankrattiger
b980fcff64
CI: Disable building VisIt in CI (#38642)
VisIt requires a deprecated version of Python (3.7) due to a VTK 8
dependency. Spack CI does not support building deprecated versions.
2023-06-29 17:33:40 -05:00
eugeneswalker
95fffe16a8
e4s ci: add hdf5-vol-daos (#37887)
* e4s ci: add hdf5-vol-daos

* hdf5-vol-daos: comment with failure notes
2023-06-28 08:31:59 -07:00
Luc Berger
41582f76bd
Kokkos Kernels: adding release 3.7.1 and 4.0.0 (#36655)
Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com>
2023-06-27 08:33:29 -07:00
Stephen Sachs
0c6d0541f0
Fix syntax to set default target in aws-pcluster pipelines (#38048)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-06-24 15:25:19 +02:00
Axel Huebl
d1bc4c4ef1
WarpX 23.06 (#38303)
* WarpX 23.06

Update WarpX and related Python packages to the lastest releases.

WarpX 23.06 introduces multi-dimension support in a single package,
which will ease deployment in E4S et al. that can ship now a single,
full-feature module/package that is NOT incompatible with itself
anymore.

* e4s ci stacks: multiple specs for each dim variant no longer required

* [@spackbot] updating style on behalf of ax3l

* WarpX: Update CMake CLI and Test/Check

* Add Missing `build-directory`

* [@spackbot] updating style on behalf of ax3l

* Remove `build_directory` again

---------

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
Co-authored-by: ax3l <ax3l@users.noreply.github.com>
2023-06-16 06:47:59 -07:00
Massimiliano Culpo
d5747a61e7
Hotfix to avoid building compilers from sources in pcluster pipelines (#38256)
The pcluster image has am internal buildcache without an index.

Also, we need to force reuse to avoid rebuilding GCC, since the default is 
to only reuse dependencies - and that is subject to changes in the GCC 
recipe.
2023-06-09 07:56:28 +02:00
eugeneswalker
cea1b3123e
e4s oneapi ci: use official intel oneapi-derived runner image (#38176)
* e4s oneapi ci: use official intel oneapi-derived runner image

* update oneapi image

* tau builds ok, but only with libdrm - comment out for now, follow up with pr later
2023-06-08 09:17:22 -07:00
eugeneswalker
5f1bc15e80
E4S Cray CI Stack (#37837)
* e4s cray ci stack

* e4s ci: add cray

* add zen4 tag

* WIP: new defintions just for cray

* updates

* remove ci signing job overrride, not necessary

* echo $PATH and show modules loaded

* add mirror

* add external def for cray-libsci

* comment out quantum-espresso

* use /etc/protected-runner as key path

* cray ci stack: do not remove tags: [spack, public]

* make cray stack composable

* generate job should run on public tagged runner, override default config:install_tree:root

* CI: Use relative path in default script

* CI: Use relative includes paths for shell runners

* Use concrete_env_dir for relpath

* ml-darwin-aarch64-mps: jax has bazel codesign issue

---------

Co-authored-by: Scott Wittenburg <scott.wittenburg@kitware.com>
Co-authored-by: Ryan Krattiger <ryan.krattiger@kitware.com>
2023-06-06 18:41:32 -07:00
Sergey Kosukhin
7d5d075809
llvm: optionally build compiler-rt, libcxx and libunwind as runtimes (#32476)
* llvm: replace +omp_as_runtime with omp=runtime

* llvm: fetch 'libomp-libflags-as-list.patch' from upstream repo

* llvm: replace 'llvm14-hwloc-ompd.patch' with the official fix from upstream repo

* llvm: fix-up for the black reformatting

* llvm: fetch 'constexpr_longdouble.patch' from upstream repo

* llvm: optionally build libcxx as a runtime

* llvm: fetch 'llvm5-sanitizer-ustat.patch' from upstream repo

* llvm: update 'sanitizer-ipc_perm_mode.patch'

* llvm: refactor compiler conflicts when libcxx=project

* llvm: fetch 'llvm_python_path.patch' from upstream repo

* llvm: update comments and condition for 'xray_buffer_queue-cstddef.patch'

* llvm: optionally build compiler-rt as a runtime

* llvm: fetch 'lldb_external_ncurses-10.patch' from upstream repo

* llvm: fetch 'llvm_py37.patch' from upstream repo

* llvm: rename variant 'internal_unwind' to 'libunwind'

* llvm: optionally build libunwind as a runtime

* llvm: extend the list of maintainers

* llvm: allow for explicit '~clang~flang~libomptarget~lldb~omp_debug~z3'

* llvm: fetch 'llvm5-lld-ELF-Symbols.patch' from FreeBSD port repo

* llvm: fetch most of 'missing-includes.patch' from upstream repo and reuse 'llvm-gcc11.patch'

* llvm: regroup patches for missing include directives and drop compiler constraints for them

* llvm: fetch 'llvm-gcc11.patch' from upstream repo

* llvm: fetch 'no_cyclades.patch' from upstream repo

* llvm: update comments and condition for 'no_cyclades9.patch'

* llvm: rename variant 'omp' to 'openmp'

* llvm: constrain and rename variant 'omp_tsan' to 'libomp_tsan'

* llvm: rename variant 'omp_debug' to 'libomptarget_debug'

* llvm: do not apply same patch twice

* llvm: constrain and document the '*-thread.patch' patches

* llvm: document the '~lld+libomptarget' conflict

* llvm: update comments for the 'D133513.diff' patch
2023-06-03 23:08:10 -05:00
eugeneswalker
1c7af83d32
update ci ml darwin keypath (#37927) 2023-05-25 16:27:56 -07:00
Adam J. Stewart
2f8cea2792
Add macOS ML CI stacks (#36586)
* Add macOS ML CI stacks

* torchmeta is no longer maintained and requires ancient PyTorch

* Add MXNet

* update darwin aarch64 stacks

* add darwin-aarch64 scoped config.yaml

* remove unnecessary cleanup job

* fix specifications

* fix labels

* fix labels

* fix indent on tags specification

* no tags for trigger jobs

* try overriding tags in stack spack.yaml

* do not use CI_STACK_CONFIG_SCOPES

* incorporate config:install_tree:root: overrides and compiler defs

* copy relevant ci-scoped config settings directly into stack spack.yaml

* remove build-job-remove

* spack ci generate: add debug flag

* include cdash config directly in stack spack.yaml

* customize build-job script section to avoid absolute paths

* add any-job specification

* tags: use aarch64-macos instead of aarch64

* generate tags: use aarch64-macos instead of aarch64

* do not add morepadding

* use shared mirror; comment out known failures

* remove any-job

* nproc || true

* comment out specs failing due to bazel from cache codesign issue

---------

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-05-25 01:12:54 -04:00