Tao Lin
c4e85faa2d
garfieldpp: add new package ( #25800 )
...
Co-authored-by: Valentin Volkl <valentin.volkl@cern.ch>
2021-09-07 08:16:15 +02:00
Ignacio Laguna
a59edb2826
fpchecker: add new package ( #25550 )
2021-09-07 08:14:25 +02:00
Timothy Brown
2e2fbc6408
mpas-model: add v 7.1 ( #25809 )
2021-09-07 08:08:04 +02:00
Adam J. Stewart
5abbd094c7
py-einops: add new package ( #25812 )
2021-09-07 07:40:18 +02:00
bernhardkaindl
ca58cb701c
gtk-doc: Fix the testsuite (hangs if gtkdocize was not installed) ( #25717 )
...
Ensure that testsuite has py-anytree and py-parameterized
and finds gtk-doc's gitdocize.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-06 20:10:14 -05:00
bernhardkaindl
84d525dbdf
perl: fix regressions in the end-of-life revisions ( #25801 )
...
- perl@:5.24.1 needs zlib@:1.2.8 - shown by more than a dozen tests
https://rt.cpan.org/Public/Bug/Display.html?id=120134
- perl@:5.26.2 needs gdbm@:1.14.1 - shown by the test suite
https://rt-archive.perl.org/perl5/Ticket/Display.html?id=133295
- Fix the test case cpan/Time-Local/t/Local.t to use 4-digit years
http://blogs.perl.org/users/tom_wyant/2020/01/my-y2020-bug.html
2021-09-06 09:07:54 -06:00
bernhardkaindl
b5fa64fb10
libunistring: apply upstream fix for test suite ( #25691 )
...
Simple case of pragma weak not working with --as-needed
https://bugs.gentoo.org/688464
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=925746
Added possiblity to build from git master(new version master)
2021-09-06 08:55:38 -06:00
Olivier Cessenat
c424b86a64
gxsview: new package, an MCNP viewer ( #25637 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-09-06 16:17:22 +02:00
Billae
ca50c91469
mesa: add v21.2.1 ( #25715 )
2021-09-06 16:02:11 +02:00
bernhardkaindl
13c0b0dcb3
uftrace: add new package ( #25710 )
2021-09-06 15:57:11 +02:00
Harmen Stoppels
834155fdb8
ccache 4.4 errors for old gcc/clang ( #25783 )
2021-09-06 15:33:08 +02:00
Axel Huebl
1badb47b80
WarpX/HiPACE/openPMD-api: Use when(...) ( #25789 )
...
Use the new with `when()` syntax for variant dependencies.
2021-09-06 15:26:04 +02:00
QuellynSnead
1a48c0f51c
elfutils: address external linkage failures in 0.185 ( #25769 )
2021-09-06 15:07:42 +02:00
lukebroskop
92e4db4681
Do not allow cray build system patch for later version of otf2 ( #25283 )
...
Co-authored-by: Luke Roskop <lroskop@cedar.head.cm.us.cray.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-09-06 14:38:51 +02:00
Terry Cojean
dd8dc08a90
Ginkgo: add v1.4.0 ( #25606 )
...
* Add a patch to skip unavailable smoke tests.
2021-09-06 14:11:35 +02:00
Jean-Paul Pelteret
3e4b576f83
deal.II: Bump minimum required version for Ginkgo package ( #25795 )
2021-09-06 14:07:11 +02:00
Michael Kuhn
526315410a
gzip: add v1.11 ( #25797 )
2021-09-06 14:00:25 +02:00
Michael Kuhn
66526cb57a
gdbm: add v1.21 ( #25798 )
2021-09-06 13:13:18 +02:00
Sebastian Ehlert
beff29176c
fpm: new package ( #25799 )
2021-09-06 13:12:53 +02:00
Jordan Galby
2af6c57afa
py-pyqt5: don't install files into qt5 install prefix ( #25657 )
...
By default, py-pyqt5 installs qt designer and qml plugins into qt5's
install `<prefix>/plugins`. Don't do that.
2021-09-06 12:18:13 +02:00
Peter Scheibel
accd6dd228
boost @1.76: set toolset for intel b2 invocation ( #25722 )
...
and simplify constraint and add explanatory comment
2021-09-05 13:34:10 +02:00
bernhardkaindl
0ad54e0679
New package: py-anytree ( #25718 )
...
It is required for running all tests of gtk-doc.
2021-09-03 14:14:38 -07:00
Asher Mancinelli
bbc9d7d965
HiOp package: update magma dependency ( #25721 )
2021-09-03 14:05:45 -07:00
bernhardkaindl
6f5ec73087
m4: fix glitch in the test suite ( #25702 )
2021-09-03 15:04:59 -06:00
Desmond Orton
0aedafda19
New package: getOrganelle@1.7.5.0 ( #25725 )
2021-09-03 14:04:24 -07:00
Jose E. Roman
ac3ccad1e2
SLEPc package: add gpu variants ( #25760 )
2021-09-03 14:01:42 -07:00
Cyrus Harrison
5180b0b454
apcomp package: add versions 0.0.3 and 0.0.2 ( #25767 )
2021-09-03 14:00:17 -07:00
pmargara
432f577a0c
RELION package: add versions 3.1.3 and 3.1.2 ( #25772 )
2021-09-03 13:58:39 -07:00
Paul Spencer
f6060c9894
Mathematica package: add version 12.2.0 ( #25791 )
2021-09-03 13:41:39 -07:00
Harmen Stoppels
c6c9213766
rocblas: use AMDGPU_TARGETS instead of Tensile_ARCHITECTURE ( #25778 )
2021-09-03 18:19:57 +02:00
Sreenivasa Murthy Kolam
29d344e4c7
update version for rocm-4.3.1 release ( #25766 )
2021-09-03 15:25:31 +02:00
bernhardkaindl
95586335f7
openssh: add v8.7 ( #25774 )
2021-09-03 06:22:40 -06:00
Weiqun Zhang
f56f4677cf
amrex: 21.09 ( #25739 )
2021-09-03 03:34:56 -06:00
Desmond Orton
043f0cd014
py-ansi2html: new package ( #25741 )
2021-09-03 11:25:52 +02:00
Desmond Orton
9841d1f571
py-cryolobm: add new package ( #25748 )
2021-09-03 11:25:06 +02:00
Desmond Orton
d61439c26a
py-lineenhancer: add new package ( #25743 )
2021-09-03 10:59:06 +02:00
Desmond Orton
0b9baf9ae3
py-terminaltables: add new package ( #25738 )
2021-09-03 10:58:18 +02:00
Axel Huebl
2331148f4b
WarpX: 21.09 ( #25771 )
...
Add the latest WarpX release.
2021-09-03 10:53:29 +02:00
Stephen Hudson
ffec74c359
libensemble: add tasmanian as optional dependency ( #25762 )
2021-09-03 10:30:08 +02:00
Desmond Orton
f162dd4f5b
py-gooey: new package ( #25763 )
2021-09-03 10:24:31 +02:00
Desmond Orton
8149048a78
py-colorclass: add new package ( #25747 )
2021-09-03 10:17:33 +02:00
Desmond Orton
2b7a2f66b7
py-mrcfile: add new package ( #25742 )
2021-09-03 10:16:38 +02:00
Desmond Orton
551766e3c6
py-pathtools: add new package ( #25749 )
2021-09-03 09:23:01 +02:00
Olivier Cessenat
35fe188d22
silo: add build dependency on m4 ( #25770 )
2021-09-03 08:54:31 +02:00
jacorvar
5f4fcea79c
Correct typo in r-assertive-data-uk ( #25754 )
...
`r-assertive-base` version contains a dot instead of a hyphen.
2021-09-02 18:10:56 -05:00
Tamara Dahlgren
487edcc416
mfem: Update stand-alone test to use test stage directory ( #25744 )
2021-09-02 14:52:56 -07:00
Gianluca Ficarelli
f71d93fc55
py-submitit: add new package ( #25699 )
2021-09-02 07:58:02 -05:00
Gilles Gouaillardet
2d78045cdd
gromacs: add v2021.3 ( #25750 )
2021-09-02 12:18:05 +02:00
Vanessasaurus
8e61f54260
start of work to add spack audit packages-https checker ( #25670 )
...
This PR will add a new audit, specifically for spack package homepage urls (and eventually
other kinds I suspect) to see if there is an http address that can be changed to https.
Usage is as follows:
```bash
$ spack audit packages-https <package>
```
And in list view:
```bash
$ spack audit list
generic:
Generic checks relying on global variables
configs:
Sanity checks on compilers.yaml
Sanity checks on packages.yaml
packages:
Sanity checks on specs used in directives
packages-https:
Sanity checks on https checks of package urls, etc.
```
I think it would be unwise to include with packages, because when run for all, since we do requests it takes a long time. I also like the idea of more well scoped checks - likely there will be other addresses for http/https within a package that we eventually check. For now, there are two error cases - one is when an https url is tried but there is some SSL error (or other error that means we cannot update to https):
```bash
$ spack audit packages-https zoltan
PKG-HTTPS-DIRECTIVES: 1 issue found
1. Error with attempting https for "zoltan":
<urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: Hostname mismatch, certificate is not valid for 'www.cs.sandia.gov'. (_ssl.c:1125)>
```
This is either not fixable, or could be fixed with a change to the url or (better) contacting the site owners to ask about some certificate or similar.
The second case is when there is an http that needs to be https, which is a huge issue now, but hopefully not after this spack PR.
```bash
$ spack audit packages-https xman
Package "xman" uses http but has a valid https endpoint.
```
And then when a package is fixed:
```bash
$ spack audit packages-https zlib
PKG-HTTPS-DIRECTIVES: 0 issues found.
```
And that's mostly it. :)
Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-09-02 08:46:27 +02:00
Cody Balos
8a7af82a82
py-adios: add new version ( #25746 )
2021-09-01 23:19:45 -07:00
Harmen Stoppels
0c61b31922
Bump nlohman-json and fix cmake args ( #25504 )
...
* Bump nlohman-json and fix cmake args
* Rename variant
2021-09-01 18:28:11 -07:00
David Beckingsale
156edffec2
Update versions for RAJA, CHAI, Umpire and camp ( #25528 )
2021-09-01 17:58:47 -07:00
eugeneswalker
6d484a055a
py-jupyterhub: add version: 1.4.1 ( #24890 )
...
* py-jupyterhub: add version: 1.4.1
* dont need mako for latest release
* sort dependencies
* notebook isnt used for 1.4.1+
* add dependency on py-jupyter-telemetry; create new package py-jupyter-telemetry
* py-jupyter-telemetry: declare missing dependencies
* py-jupyterhub: need more specific depends_on before less specific
* add py-json-logger; py-jupyter-telemetry: add depends_on for py-json-logger
* Update var/spack/repos/builtin/packages/py-jupyter-telemetry/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* remove py-json-logger erroneously and duplicatively added
* Update var/spack/repos/builtin/packages/py-jupyterhub/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* need py-alembic@1.4: for newest py-jupyterhub
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-01 22:58:24 +00:00
Harmen Stoppels
03331de0f2
bugfix: R packages can be concretized together with clingo again ( #25730 )
2021-09-01 14:12:55 -07:00
David Beckingsale
aabece46ba
Add variant to allow unsupported compiler & CUDA combinations ( #19736 )
...
Sometimes users need to be able to override the conflicts in `CudaPacakge`. This introduces a variant to enable/disable them.
2021-09-01 11:34:20 -07:00
Nisarg Patel
ab37ac95bf
Adding new versions of redis ( #25714 )
2021-09-01 11:39:39 +02:00
Harmen Stoppels
2411a9599e
nghttp2: add v1.44.0, fix build ( #25605 )
2021-09-01 11:33:31 +02:00
Peter Scheibel
b0ee7deaa7
allow building silo+mpi ^hdf5~mpi ( #25724 )
2021-09-01 09:43:57 +02:00
Richarda Butler
7adacf967d
Legion: Add E4S testsuite stand alone test ( #25285 )
...
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2021-08-31 16:57:55 -07:00
Richarda Butler
2633cf7da6
Papyrus: Add E4S testsuite stand alone test ( #25324 )
2021-08-31 15:56:20 -07:00
Hadrien G
3c6050d3a2
acts: add v12.0.0, v12.0.1 ( #25697 )
2021-08-31 16:44:01 +02:00
Jen Herting
beb3524392
[py-plotly] added version 5.2.2 ( #25668 )
...
* [py-plotly] added version 5.2.2
* [py-plotly] flake8
* [py-plotly] requests not required for new version
2021-08-30 16:15:49 -05:00
Adam J. Stewart
8ee5bf6d03
py-pythran: update checksum for patch ( #25693 )
...
* Replace URL patch with file patch
* Add comment explaining patch origin and purpose
2021-08-30 10:02:39 -07:00
psakievich
a018f48df9
Updates to Exawind packages ( #25568 )
2021-08-30 09:22:55 -06:00
lorddavidiii
e51463f587
asciidoc-py3: add v9.1.0, v9.0.5 and v9.0.4 ( #25562 )
2021-08-30 08:32:03 -06:00
Piotr Luszczek
378543b554
plasma: add version 21.8.29, migrate url ( #25688 )
2021-08-30 07:46:46 -06:00
Valentin Volkl
3cd224afbf
gaudi: update py-xenv dependency ( #25457 )
2021-08-30 07:13:41 -06:00
Mikael Simberg
44c0089be4
Add patch to fix Boost with CCE and CUDA ( #25534 )
2021-08-30 05:19:54 -06:00
Bryan Herman
65584a3b92
universal-ctags: add version p5.9.20210829.0 ( #25361 )
2021-08-30 11:51:47 +02:00
Phil Carns
ab657d7b53
mochi-margo: add v0.9.5 ( #25365 )
2021-08-30 11:42:36 +02:00
Ryan Marcellino
d3d0ee7328
miniconda3: add v4.10.3 ( #25442 )
...
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30 11:39:27 +02:00
Ryan Marcellino
ed17c3638b
anaconda3: add v2021.05 ( #25443 )
...
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30 11:38:23 +02:00
Valentin Volkl
2f777d08a2
rivet: fixes for gcc@10: ( #25454 )
2021-08-30 11:37:39 +02:00
lorddavidiii
e60e41d9ca
ocl-icd: add v2.3.1 ( #25561 )
2021-08-30 11:11:16 +02:00
Mikael Simberg
d381ab77b2
boost: add v1.77.0 ( #25536 )
2021-08-30 10:19:49 +02:00
Adam J. Stewart
1bf051e229
py-pbr: fix import tests ( #25679 )
2021-08-30 09:11:44 +02:00
Adam J. Stewart
506f62ddfe
py-jupyterlab: fix import tests ( #25680 )
2021-08-30 09:11:30 +02:00
Adam J. Stewart
a6a448b16c
py-metpy: fix import tests ( #25681 )
2021-08-30 09:11:14 +02:00
Adam J. Stewart
0dfa49af8e
py-flit-core: build from source ( #25682 )
2021-08-30 09:09:08 +02:00
Barry Rountree
b3128af901
tmux: added additional versions. ( #25684 )
...
Added sha256 checksums for 3.21, 3.2, 3.1c 3.1a, 3.1, 3.0 and 2.9a.
Co-authored-by: Barry <rountree4@llnl.gov>
2021-08-30 09:07:43 +02:00
Joe Schoonover
5029b8ca55
FLAP: add new package ( #25685 )
...
Co-authored-by: Joe Schoonover <joe@fluidnumerics.com>
2021-08-30 09:04:05 +02:00
Hadrien G
0d226aa710
acts: add v11.0.0, v10.0.0 ( #25444 )
2021-08-30 00:58:39 -06:00
Sebastian Schmitt
07a9cb87ef
Bump py-salib ( #25403 )
2021-08-29 08:19:12 -05:00
Kai Germaschewski
7cafe7dd66
add 'develop' branch to cmake package ( #25623 )
...
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-08-28 18:42:55 +02:00
Chen Wang
025dbb2162
recorder: add v2.2.1, v2.2.0, "master" and "pilgrim" ( #25674 )
2021-08-28 10:17:35 +02:00
Harmen Stoppels
e2b9ba3001
Add zstd support to libarchive ( #25659 )
2021-08-27 17:28:46 -07:00
Adam J. Stewart
3a4073cfff
py-flit: add maintainer ( #25667 )
2021-08-27 17:26:41 -07:00
Harmen Stoppels
9577d890c4
add py-flameprof ( #25539 )
2021-08-27 17:22:35 -06:00
Harmen Stoppels
9d17d474ff
Add missing link dep for py-uwsgi ( #25654 )
2021-08-27 13:44:21 -05:00
Adam J. Stewart
50411f8394
py-psycopg2: add version 2.9.1 ( #25646 )
2021-08-27 11:00:47 -07:00
Adam J. Stewart
32210b0658
py-pathlib: prevent conflicts with standard library ( #25631 )
2021-08-27 10:58:20 -07:00
Adam J. Stewart
98e6e4a3a5
New package: py-flit ( #25630 )
2021-08-27 10:57:07 -07:00
Chris Richardson
a7c6224b3a
FEniCSx packages: add version 0.3.0 ( #25627 )
2021-08-27 10:55:01 -07:00
Adam J. Stewart
9d95125d6a
py-pyinstrument: add version 4.0.3 ( #25632 )
...
* Swap github download link for pypi
* Versions >= 4 dont need npm
2021-08-27 10:51:48 -07:00
Dylan Simon
ed07fa4c37
r-irkernel: add version 1.2; update version 0.7 ( #25644 )
...
Use a commit hash instead of a tag for 0.7
2021-08-27 10:44:10 -07:00
Jordan Galby
2d97d877e4
figlet: Fix figlet font dir ( #25662 )
...
By default, figlet looks for fonts in `/usr/local/share/figlet`, and if
it doesn't exist you get `figlet: standard: Unable to open font file`.
This fix changes the default font dir to the one installed in the
install prefix.
2021-08-27 10:42:12 -07:00
Timothy Brown
7fd4dee962
ESMF package: add version 8.1.1 ( #25590 )
...
Also build with internal lapack library by default.
2021-08-27 10:26:06 -07:00
Michael Kuhn
4f3a538519
meson: add 0.59.1 and 0.58.2 ( #25661 )
2021-08-27 06:35:00 -06:00
Michael Kuhn
5c1710f7dc
glib: add 2.68.4 ( #25660 )
2021-08-27 06:22:42 -06:00
Vanessasaurus
1113705080
adding remainder of issues from repology problems ( #25653 )
...
some of these are not resolvable in that there is only an http page
available, or a page reported as broken is actually ok, or a page has
an SSL error that does not prevent one from visiting (and no good replacement)
Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-08-27 01:16:46 -06:00
