zhangyiss/spack
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity
9,110 Commits 246 Branches 186 Tags
fed9cf07778c7b25246b766c67e78708f8f6a6c8
Commit Graph

9110 Commits

This Branch
This Branch
All Branches
Author SHA1 Message Date
Michael Kuhn
c77bc613eb Fix missing spack.compiler import (#8240) 
Fixes: #8258

#8090 altered import behavior so that import spack no longer
provides access to many other Spack modules. This addresses
a case which depended on the prior behavior and was not
updated as part of #8090. This particular import error only
came up when users were setting compiler flags on specs.

See also: #8194
 2018-05-24 10:59:20 -07:00
Geoff Womeldorff
fdb2d6f493 kokkos: update kokkos spackage to add current host/gpu architectures. (#8226) 
* kokkos: update kokkos spackage to add current host/gpu architectures.

* kokkos: simplify host/gpu architecture selection and make intent of arg population logic more clear.

* kokkos: mollify flake8.

* Make strings and logic more pythonic. Add error for GPU arch without CUDA.

* kokkos: simplify conflicts behaviour. make args population more pythonic.

* kokkos: move gpu values to list for use in variant and conflicts checking.

* kokkos: How fortunate the man with None.

* kokkos: fix gpu_arch conflict loop error. add conflict to guard against +cuda and 2.5.00:develop versions, until kokkos issue #1296 is resolved.

* kokkos: mollify flake8.

* kokkos: add descriptive message to version conflict with +cuda.
 2018-05-24 10:53:58 -05:00
Matthias Diener
4c4e2866d8 Charm++: Add possibility to build git version (#8260) 2018-05-24 10:48:37 -05:00
Sajid Ali
5fff4da5b7 Add msgpack-c 3.0.1 (#8264) 
* 	new file:   cpp-3.0.1.tar.gz
	modified:   package.py

* 	deleted:    cpp-3.0.1.tar.gz

* remove whitespace
 2018-05-24 10:47:31 -05:00
Levi Baber
fdf889264e trf: make executable (#8265) 2018-05-24 10:47:17 -05:00
Chris Hadjigeorgiou
db4062b01f openfoam-org: add v2.4.0 (#7850) 
Add 2.4.0 changes
 2018-05-24 08:44:41 -07:00
jkelling
fa1153d116 Fix MD5 hash for opencv 3.2.0 and 3.1.0 release (#8241) 2018-05-24 08:59:11 -05:00
George Hartzell
80e4c7da0e Add info for datamash@1.3 (#8261) 2018-05-23 18:40:14 -05:00
Adam J. Stewart
9b9980256f Add kealib 1.4.7 (#8235) 
* Add kealib 1.4.7

* Fix out-of-source builds

* Remove username from kealib hg clone
 2018-05-23 18:36:12 -05:00
Adam J. Stewart
8f3d717a30 Add PROJ 5.0.1 (#8233) 
* Add PROJ 5.0.1

* proj-datumgrid resource must be placed in nad directory
 2018-05-23 13:29:08 -05:00
Massimiliano Culpo
0ea8c4f3b2 mvapich2: added a proper libs attribute (#8253) 2018-05-23 13:28:21 -05:00
Adam J. Stewart
13a1575452 Add pkgconf 1.4.2 (#8256) 2018-05-23 13:27:39 -05:00
Adam J. Stewart
f57ce38c41 Add ncurses 6.1 (#8257) 2018-05-23 13:27:22 -05:00
Edward Kim
011d1245fb charm: Update install script (#7291) 
* charm: Update install script

* Addressed PR comments

* Removed destination and suffix variants

* Added back parallel support
 2018-05-23 13:26:59 -05:00
Massimiliano Culpo
9fee111741 gromacs: added version 2018.1 (#8251) 2018-05-23 10:13:09 -05:00
Massimiliano Culpo
251019c5e4 cgal: added version 4.12 (#8252) 2018-05-23 10:11:03 -05:00
Tim Law
60df206648 Update BookLeaf_Cpp and Typhon packages. (#8249) 2018-05-23 07:28:15 -05:00
Leonhard Reichenbach
ace283d594 Add latest versions of bazel (#8250) 2018-05-23 07:27:45 -05:00
Sinan
bc73e85af8 Package/mirdeep/fix for new url take2 (#8247) 
* rename: mirdeep -> mirdeep2

* fixes for new url
 2018-05-23 07:25:42 -05:00
Leonhard Reichenbach
3712ac1f66 Create new package: memkind (#8242) 
* Create new package: memkind

* some style changes

* fix type of numactl dependency

* fix flake8 errors

* use patch() instead of a custom build phase
 2018-05-22 13:37:03 -05:00
Adam J. Stewart
4d3ed1ff13 Add py-docopt package (#8236) 2018-05-22 10:49:12 -05:00
Massimiliano Culpo
0106c6cab7 subread: added version 1.6.2 (#8239) 2018-05-22 14:16:06 +02:00
Axel Huebl
cd72312940 CUDA 9.2 (#8238) 
Add the latest CUDA release, v9.2 and updated CUDA Compatibility Matrix
 2018-05-22 12:45:47 +02:00
Tim Stavenger
b61175aeba Update GlobalArrays package to new releases (#7840) 
* update globalarrays package to current releases

* rename class to Globalarrays to match package folder

* rename bytes to int64, minor cleanup of descriptions

* int64 False by default

* remove reference to external as we aren't supplying paths, and use args.append()

* correcting args.append syntax

* add conflicts
 2018-05-21 20:06:29 -05:00
Elizabeth Fischer
68e7fd053e gdbm: Get working on CentOS5 and Other Older Systems (#8134) 
* Fix #7691

* flake8

* code review
 2018-05-21 16:24:38 -05:00
Elizabeth Fischer
90d36016ef netcdf-cxx4: Update to use CPPFLAGS (#8148) 
* Fix bug; don't know why this ever worked in the first place.

* Add fix to netcdf-fortran too; flake8

* Simplify configure_args()

* netcdf-fortran: simplify that too
 2018-05-21 16:23:35 -05:00
lingnanyuan
646771300d Create new package: fastgbs and its dependency platypus. (#8174) 
* pushing partially done recipe for fast-gbs and platypus

* modify platypus

* change header

* fast-gbs: change dependency type.

* modify dependency type.

* modify dependency type.

* fast-gbs: Change dependency type to run.
 2018-05-21 16:13:05 -05:00
peetsv
2cfde03a60 r-cghflasso v0 2 1 - new package (#8177) 
* py-pyfaidx: adding new package

* updating the url

* r-cghflasso v0.2-1 new package

* correcting copy/paste error

* adding list_url
 2018-05-21 16:12:35 -05:00
Jim Galarowicz
d7aaf4e193 Add urls into cbtf* and openspeedshop* package files and update the release versions for the Krell products (#8188) 2018-05-21 16:03:31 -05:00
Dan FitzGerald
8564be5479 Rename Tpetra C wrappers for *gemm Fortran functions in Trilinos 12.12.1 (#8228) 
* Updated trilinos to compile/install with xl_r

* Undo PGI patch added as part of Trilinos XL fix

* Remove PGI related changes in Trilinos XL fix
 2018-05-21 16:00:10 -05:00
Adam J. Stewart
fba365dc6a Add Python/Ruby bindings to GEOS package (#8218) 
* Add python/ruby bindings to GEOS package

* Add comment on Python 3 support
 2018-05-21 15:59:50 -05:00
Adam J. Stewart
ac2b0f3ac0 Add lcms 2.9 (#8219) 2018-05-21 15:59:11 -05:00
Adam J. Stewart
ed0f5e9b4c Add missing dependencies to poppler package (#8220) 2018-05-21 15:58:51 -05:00
Adam J. Stewart
729c3f9168 Add bmake 20180512 (#8221) 
* Add bmake 20180512

* Re-add manpage patch
 2018-05-21 15:58:11 -05:00
Eric
6ec603860a py-testinfra: Add versions 1.12.0 and 1.13.0 (#8222) 2018-05-21 15:57:25 -05:00
George Hartzell
e954686e5a Add info about haveged to gpg/randomness note (#8227) 2018-05-21 15:57:03 -05:00
mcneish1
15634c20fe Update the hash of libjpeg v9c. (#8230) 
The maintainer redid the archive in March, removing a .directory file.
 2018-05-21 15:53:55 -05:00
Adam J. Stewart
6bf9f66567 Add cryptopp 7.0.0 (#8224) 2018-05-21 11:52:25 -05:00
Massimiliano Culpo
e933ed2b50 Updated sbt to point to github. Added versions 1.1.4, 0.13.17. (#7951) 2018-05-21 16:58:23 +02:00
Adam J. Stewart
7e04b20f3e Add PCRE2 10.31 (#8214) 2018-05-20 15:05:47 -05:00
Adam J. Stewart
7b5c76552a Add PCRE 8.42 (#8213) 2018-05-20 15:05:29 -05:00
Adam J. Stewart
e0d7e8ebd2 Add sqlite 3.23.1 (#8212) 2018-05-20 15:05:11 -05:00
Adam J. Stewart
a5d2e59320 Add libxml2 2.9.8 (#8211) 2018-05-20 15:04:47 -05:00
Adam J. Stewart
478c99ce01 Add cURL 7.60.0 (#8210) 2018-05-20 15:04:28 -05:00
Adam J. Stewart
e0dad09ea2 Add Xerces-C++ 3.2.1 (#8208) 2018-05-20 15:04:06 -05:00
Adam J. Stewart
15d102acec Add FYBA package (#8205) 2018-05-20 15:03:38 -05:00
Adam J. Stewart
04687598c9 Add libgeotiff package (#8203) 2018-05-20 15:02:49 -05:00
Adam J. Stewart
0ccbc3a479 URL parsing: strip x86-64 from filename (#8200) 2018-05-20 15:01:58 -05:00
Adam J. Stewart
0a47db5088 Add xz 5.2.4 (#8202) 2018-05-20 15:01:33 -05:00
Adam J. Stewart
17e6260d4b Add libtiff 4.0.9 (#8201) 2018-05-20 15:01:11 -05:00