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789 Commits
balay/pets
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bugfix/inv
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4
.devcontainer/devcontainer.json
Normal file
4
.devcontainer/devcontainer.json
Normal file
@@ -0,0 +1,4 @@
|
||||
{
|
||||
"image": "ghcr.io/spack/ubuntu20.04-runner-amd64-gcc-11.4:2023.08.01",
|
||||
"postCreateCommand": "./.devcontainer/postCreateCommand.sh"
|
||||
}
|
||||
20
.devcontainer/postCreateCommand.sh
Executable file
20
.devcontainer/postCreateCommand.sh
Executable file
@@ -0,0 +1,20 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Load spack environment at terminal startup
|
||||
cat <<EOF >> /root/.bashrc
|
||||
. /workspaces/spack/share/spack/setup-env.sh
|
||||
EOF
|
||||
|
||||
# Load spack environment in this script
|
||||
. /workspaces/spack/share/spack/setup-env.sh
|
||||
|
||||
# Ensure generic targets for maximum matching with buildcaches
|
||||
spack config --scope site add "packages:all:require:[target=x86_64_v3]"
|
||||
spack config --scope site add "concretizer:targets:granularity:generic"
|
||||
|
||||
# Find compiler and install gcc-runtime
|
||||
spack compiler find --scope site
|
||||
|
||||
# Setup buildcaches
|
||||
spack mirror add --scope site develop https://binaries.spack.io/develop
|
||||
spack buildcache keys --install --trust
|
||||
42
.github/workflows/audit.yaml
vendored
42
.github/workflows/audit.yaml
vendored
@@ -17,33 +17,53 @@ concurrency:
|
||||
jobs:
|
||||
# Run audits on all the packages in the built-in repository
|
||||
package-audits:
|
||||
runs-on: ${{ matrix.operating_system }}
|
||||
runs-on: ${{ matrix.system.os }}
|
||||
strategy:
|
||||
matrix:
|
||||
operating_system: ["ubuntu-latest", "macos-latest"]
|
||||
system:
|
||||
- { os: windows-latest, shell: 'powershell Invoke-Expression -Command "./share/spack/qa/windows_test_setup.ps1"; {0}' }
|
||||
- { os: ubuntu-latest, shell: bash }
|
||||
- { os: macos-latest, shell: bash }
|
||||
defaults:
|
||||
run:
|
||||
shell: ${{ matrix.system.shell }}
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: ${{inputs.python_version}}
|
||||
- name: Install Python packages
|
||||
run: |
|
||||
pip install --upgrade pip setuptools pytest coverage[toml]
|
||||
- name: Setup for Windows run
|
||||
if: runner.os == 'Windows'
|
||||
run: |
|
||||
python -m pip install --upgrade pywin32
|
||||
- name: Package audits (with coverage)
|
||||
if: ${{ inputs.with_coverage == 'true' }}
|
||||
if: ${{ inputs.with_coverage == 'true' && runner.os != 'Windows' }}
|
||||
run: |
|
||||
. share/spack/setup-env.sh
|
||||
coverage run $(which spack) audit packages
|
||||
coverage run $(which spack) audit externals
|
||||
coverage run $(which spack) -d audit externals
|
||||
coverage combine
|
||||
coverage xml
|
||||
- name: Package audits (without coverage)
|
||||
if: ${{ inputs.with_coverage == 'false' }}
|
||||
if: ${{ inputs.with_coverage == 'false' && runner.os != 'Windows' }}
|
||||
run: |
|
||||
. share/spack/setup-env.sh
|
||||
$(which spack) audit packages
|
||||
$(which spack) audit externals
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab # @v2.1.0
|
||||
. share/spack/setup-env.sh
|
||||
spack -d audit packages
|
||||
spack -d audit externals
|
||||
- name: Package audits (without coverage)
|
||||
if: ${{ runner.os == 'Windows' }}
|
||||
run: |
|
||||
. share/spack/setup-env.sh
|
||||
spack -d audit packages
|
||||
./share/spack/qa/validate_last_exit.ps1
|
||||
spack -d audit externals
|
||||
./share/spack/qa/validate_last_exit.ps1
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
if: ${{ inputs.with_coverage == 'true' }}
|
||||
with:
|
||||
flags: unittests,audits
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
|
||||
5
.github/workflows/bootstrap-test.sh
vendored
5
.github/workflows/bootstrap-test.sh
vendored
@@ -1,7 +1,8 @@
|
||||
#!/bin/bash
|
||||
set -ex
|
||||
set -e
|
||||
source share/spack/setup-env.sh
|
||||
$PYTHON bin/spack bootstrap disable github-actions-v0.4
|
||||
$PYTHON bin/spack bootstrap disable spack-install
|
||||
$PYTHON bin/spack -d solve zlib
|
||||
$PYTHON bin/spack $SPACK_FLAGS solve zlib
|
||||
tree $BOOTSTRAP/store
|
||||
exit 0
|
||||
|
||||
346
.github/workflows/bootstrap.yml
vendored
346
.github/workflows/bootstrap.yml
vendored
@@ -13,118 +13,22 @@ concurrency:
|
||||
cancel-in-progress: true
|
||||
|
||||
jobs:
|
||||
fedora-clingo-sources:
|
||||
distros-clingo-sources:
|
||||
runs-on: ubuntu-latest
|
||||
container: "fedora:latest"
|
||||
container: ${{ matrix.image }}
|
||||
strategy:
|
||||
matrix:
|
||||
image: ["fedora:latest", "opensuse/leap:latest"]
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
- name: Setup Fedora
|
||||
if: ${{ matrix.image == 'fedora:latest' }}
|
||||
run: |
|
||||
dnf install -y \
|
||||
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
|
||||
bzip2 curl file gcc-c++ gcc gcc-gfortran git gzip \
|
||||
make patch unzip which xz python3 python3-devel tree \
|
||||
cmake bison bison-devel libstdc++-static
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup non-root user
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
useradd spack-test && mkdir -p ~spack-test
|
||||
chown -R spack-test . ~spack-test
|
||||
- name: Setup repo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap clingo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack external find cmake bison
|
||||
spack -d solve zlib
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
ubuntu-clingo-sources:
|
||||
runs-on: ubuntu-latest
|
||||
container: "ubuntu:latest"
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
env:
|
||||
DEBIAN_FRONTEND: noninteractive
|
||||
run: |
|
||||
apt-get update -y && apt-get upgrade -y
|
||||
apt-get install -y \
|
||||
bzip2 curl file g++ gcc gfortran git gnupg2 gzip \
|
||||
make patch unzip xz-utils python3 python3-dev tree \
|
||||
cmake bison
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup non-root user
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
useradd spack-test && mkdir -p ~spack-test
|
||||
chown -R spack-test . ~spack-test
|
||||
- name: Setup repo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap clingo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack external find cmake bison
|
||||
spack -d solve zlib
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
ubuntu-clingo-binaries-and-patchelf:
|
||||
runs-on: ubuntu-latest
|
||||
container: "ubuntu:latest"
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
env:
|
||||
DEBIAN_FRONTEND: noninteractive
|
||||
run: |
|
||||
apt-get update -y && apt-get upgrade -y
|
||||
apt-get install -y \
|
||||
bzip2 curl file g++ gcc gfortran git gnupg2 gzip \
|
||||
make patch unzip xz-utils python3 python3-dev tree
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup non-root user
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
useradd spack-test && mkdir -p ~spack-test
|
||||
chown -R spack-test . ~spack-test
|
||||
- name: Setup repo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap clingo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack -d solve zlib
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
opensuse-clingo-sources:
|
||||
runs-on: ubuntu-latest
|
||||
container: "opensuse/leap:latest"
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
- name: Setup OpenSUSE
|
||||
if: ${{ matrix.image == 'opensuse/leap:latest' }}
|
||||
run: |
|
||||
# Harden CI by applying the workaround described here: https://www.suse.com/support/kb/doc/?id=000019505
|
||||
zypper update -y || zypper update -y
|
||||
@@ -133,15 +37,9 @@ jobs:
|
||||
make patch unzip which xz python3 python3-devel tree \
|
||||
cmake bison
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup repo
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap clingo
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
@@ -151,77 +49,102 @@ jobs:
|
||||
spack -d solve zlib
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
macos-clingo-sources:
|
||||
runs-on: macos-latest
|
||||
clingo-sources:
|
||||
runs-on: ${{ matrix.runner }}
|
||||
strategy:
|
||||
matrix:
|
||||
runner: ['macos-13', 'macos-14', "ubuntu-latest"]
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
- name: Setup macOS
|
||||
if: ${{ matrix.runner != 'ubuntu-latest' }}
|
||||
run: |
|
||||
brew install cmake bison@2.7 tree
|
||||
brew install cmake bison tree
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: "3.12"
|
||||
- name: Bootstrap clingo
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
export PATH=/usr/local/opt/bison@2.7/bin:$PATH
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack external find --not-buildable cmake bison
|
||||
spack -d solve zlib
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
macos-clingo-binaries:
|
||||
runs-on: ${{ matrix.macos-version }}
|
||||
gnupg-sources:
|
||||
runs-on: ${{ matrix.runner }}
|
||||
strategy:
|
||||
matrix:
|
||||
macos-version: ['macos-11', 'macos-12']
|
||||
runner: [ 'macos-13', 'macos-14', "ubuntu-latest" ]
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
- name: Setup macOS
|
||||
if: ${{ matrix.runner != 'ubuntu-latest' }}
|
||||
run: |
|
||||
brew install tree
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- name: Bootstrap clingo
|
||||
# Remove GnuPG since we want to bootstrap it
|
||||
sudo rm -rf /usr/local/bin/gpg
|
||||
- name: Setup Ubuntu
|
||||
if: ${{ matrix.runner == 'ubuntu-latest' }}
|
||||
run: |
|
||||
set -ex
|
||||
for ver in '3.7' '3.8' '3.9' '3.10' '3.11' ; do
|
||||
not_found=1
|
||||
ver_dir="$(find $RUNNER_TOOL_CACHE/Python -wholename "*/${ver}.*/*/bin" | grep . || true)"
|
||||
echo "Testing $ver_dir"
|
||||
if [[ -d "$ver_dir" ]] ; then
|
||||
if $ver_dir/python --version ; then
|
||||
export PYTHON="$ver_dir/python"
|
||||
not_found=0
|
||||
old_path="$PATH"
|
||||
export PATH="$ver_dir:$PATH"
|
||||
./bin/spack-tmpconfig -b ./.github/workflows/bootstrap-test.sh
|
||||
export PATH="$old_path"
|
||||
fi
|
||||
fi
|
||||
# NOTE: test all pythons that exist, not all do on 12
|
||||
done
|
||||
|
||||
ubuntu-clingo-binaries:
|
||||
runs-on: ubuntu-20.04
|
||||
steps:
|
||||
sudo rm -rf $(which gpg) $(which gpg2) $(which patchelf)
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup repo
|
||||
- name: Bootstrap GnuPG
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
source share/spack/setup-env.sh
|
||||
spack solve zlib
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack -d gpg list
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
from-binaries:
|
||||
runs-on: ${{ matrix.runner }}
|
||||
strategy:
|
||||
matrix:
|
||||
runner: ['macos-13', 'macos-14', "ubuntu-latest"]
|
||||
steps:
|
||||
- name: Setup macOS
|
||||
if: ${{ matrix.runner != 'ubuntu-latest' }}
|
||||
run: |
|
||||
brew install tree
|
||||
# Remove GnuPG since we want to bootstrap it
|
||||
sudo rm -rf /usr/local/bin/gpg
|
||||
- name: Setup Ubuntu
|
||||
if: ${{ matrix.runner == 'ubuntu-latest' }}
|
||||
run: |
|
||||
sudo rm -rf $(which gpg) $(which gpg2) $(which patchelf)
|
||||
- name: Checkout
|
||||
uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: |
|
||||
3.8
|
||||
3.9
|
||||
3.10
|
||||
3.11
|
||||
3.12
|
||||
- name: Set bootstrap sources
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack bootstrap disable spack-install
|
||||
- name: Bootstrap clingo
|
||||
run: |
|
||||
set -ex
|
||||
for ver in '3.7' '3.8' '3.9' '3.10' '3.11' ; do
|
||||
set -e
|
||||
for ver in '3.8' '3.9' '3.10' '3.11' '3.12' ; do
|
||||
not_found=1
|
||||
ver_dir="$(find $RUNNER_TOOL_CACHE/Python -wholename "*/${ver}.*/*/bin" | grep . || true)"
|
||||
echo "Testing $ver_dir"
|
||||
if [[ -d "$ver_dir" ]] ; then
|
||||
echo "Testing $ver_dir"
|
||||
if $ver_dir/python --version ; then
|
||||
export PYTHON="$ver_dir/python"
|
||||
not_found=0
|
||||
@@ -236,122 +159,9 @@ jobs:
|
||||
exit 1
|
||||
fi
|
||||
done
|
||||
|
||||
ubuntu-gnupg-binaries:
|
||||
runs-on: ubuntu-latest
|
||||
container: "ubuntu:latest"
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
env:
|
||||
DEBIAN_FRONTEND: noninteractive
|
||||
run: |
|
||||
apt-get update -y && apt-get upgrade -y
|
||||
apt-get install -y \
|
||||
bzip2 curl file g++ gcc patchelf gfortran git gzip \
|
||||
make patch unzip xz-utils python3 python3-dev tree
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup non-root user
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
useradd spack-test && mkdir -p ~spack-test
|
||||
chown -R spack-test . ~spack-test
|
||||
- name: Setup repo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap GnuPG
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack bootstrap disable spack-install
|
||||
spack -d gpg list
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
ubuntu-gnupg-sources:
|
||||
runs-on: ubuntu-latest
|
||||
container: "ubuntu:latest"
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
env:
|
||||
DEBIAN_FRONTEND: noninteractive
|
||||
run: |
|
||||
apt-get update -y && apt-get upgrade -y
|
||||
apt-get install -y \
|
||||
bzip2 curl file g++ gcc patchelf gfortran git gzip \
|
||||
make patch unzip xz-utils python3 python3-dev tree \
|
||||
gawk
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- name: Setup non-root user
|
||||
run: |
|
||||
# See [1] below
|
||||
git config --global --add safe.directory /__w/spack/spack
|
||||
useradd spack-test && mkdir -p ~spack-test
|
||||
chown -R spack-test . ~spack-test
|
||||
- name: Setup repo
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
git --version
|
||||
. .github/workflows/setup_git.sh
|
||||
- name: Bootstrap GnuPG
|
||||
shell: runuser -u spack-test -- bash {0}
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack solve zlib
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack -d gpg list
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
macos-gnupg-binaries:
|
||||
runs-on: macos-latest
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
run: |
|
||||
brew install tree
|
||||
# Remove GnuPG since we want to bootstrap it
|
||||
sudo rm -rf /usr/local/bin/gpg
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- name: Bootstrap GnuPG
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack bootstrap disable spack-install
|
||||
spack -d gpg list
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
macos-gnupg-sources:
|
||||
runs-on: macos-latest
|
||||
steps:
|
||||
- name: Install dependencies
|
||||
run: |
|
||||
brew install gawk tree
|
||||
# Remove GnuPG since we want to bootstrap it
|
||||
sudo rm -rf /usr/local/bin/gpg
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- name: Bootstrap GnuPG
|
||||
run: |
|
||||
source share/spack/setup-env.sh
|
||||
spack solve zlib
|
||||
spack bootstrap disable github-actions-v0.5
|
||||
spack bootstrap disable github-actions-v0.4
|
||||
spack -d gpg list
|
||||
tree ~/.spack/bootstrap/store/
|
||||
|
||||
|
||||
# [1] Distros that have patched git to resolve CVE-2022-24765 (e.g. Ubuntu patching v2.25.1)
|
||||
# introduce breaking behaviorso we have to set `safe.directory` in gitconfig ourselves.
|
||||
# See:
|
||||
# - https://github.blog/2022-04-12-git-security-vulnerability-announced/
|
||||
# - https://github.com/actions/checkout/issues/760
|
||||
# - http://changelogs.ubuntu.com/changelogs/pool/main/g/git/git_2.25.1-1ubuntu3.3/changelog
|
||||
|
||||
24
.github/workflows/build-containers.yml
vendored
24
.github/workflows/build-containers.yml
vendored
@@ -45,17 +45,18 @@ jobs:
|
||||
[leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
|
||||
[ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
|
||||
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
|
||||
[ubuntu-noble, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:24.04'],
|
||||
[almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
|
||||
[almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
|
||||
[rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
|
||||
[rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
|
||||
[fedora37, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:37'],
|
||||
[fedora38, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:38']]
|
||||
[fedora39, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:39'],
|
||||
[fedora40, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:40']]
|
||||
name: Build ${{ matrix.dockerfile[0] }}
|
||||
if: github.repository == 'spack/spack'
|
||||
steps:
|
||||
- name: Checkout
|
||||
uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
|
||||
- uses: docker/metadata-action@8e5442c4ef9f78752691e2d8f8d19755c6f78e81
|
||||
id: docker_meta
|
||||
@@ -87,16 +88,16 @@ jobs:
|
||||
fi
|
||||
|
||||
- name: Upload Dockerfile
|
||||
uses: actions/upload-artifact@a8a3f3ad30e3422c9c7b888a15615d19a852ae32
|
||||
uses: actions/upload-artifact@65462800fd760344b1a7b4382951275a0abb4808
|
||||
with:
|
||||
name: dockerfiles
|
||||
name: dockerfiles_${{ matrix.dockerfile[0] }}
|
||||
path: dockerfiles
|
||||
|
||||
- name: Set up QEMU
|
||||
uses: docker/setup-qemu-action@68827325e0b33c7199eb31dd4e31fbe9023e06e3
|
||||
|
||||
- name: Set up Docker Buildx
|
||||
uses: docker/setup-buildx-action@2b51285047da1547ffb1b2203d8be4c0af6b1f20
|
||||
uses: docker/setup-buildx-action@d70bba72b1f3fd22344832f00baa16ece964efeb
|
||||
|
||||
- name: Log in to GitHub Container Registry
|
||||
uses: docker/login-action@e92390c5fb421da1463c202d546fed0ec5c39f20
|
||||
@@ -120,3 +121,14 @@ jobs:
|
||||
push: ${{ github.event_name != 'pull_request' }}
|
||||
tags: ${{ steps.docker_meta.outputs.tags }}
|
||||
labels: ${{ steps.docker_meta.outputs.labels }}
|
||||
|
||||
merge-dockerfiles:
|
||||
runs-on: ubuntu-latest
|
||||
needs: deploy-images
|
||||
steps:
|
||||
- name: Merge Artifacts
|
||||
uses: actions/upload-artifact/merge@65462800fd760344b1a7b4382951275a0abb4808
|
||||
with:
|
||||
name: dockerfiles
|
||||
pattern: dockerfiles_*
|
||||
delete-merged: true
|
||||
|
||||
6
.github/workflows/ci.yaml
vendored
6
.github/workflows/ci.yaml
vendored
@@ -18,6 +18,7 @@ jobs:
|
||||
prechecks:
|
||||
needs: [ changes ]
|
||||
uses: ./.github/workflows/valid-style.yml
|
||||
secrets: inherit
|
||||
with:
|
||||
with_coverage: ${{ needs.changes.outputs.core }}
|
||||
all-prechecks:
|
||||
@@ -35,7 +36,7 @@ jobs:
|
||||
core: ${{ steps.filter.outputs.core }}
|
||||
packages: ${{ steps.filter.outputs.packages }}
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
if: ${{ github.event_name == 'push' }}
|
||||
with:
|
||||
fetch-depth: 0
|
||||
@@ -70,14 +71,17 @@ jobs:
|
||||
if: ${{ github.repository == 'spack/spack' && needs.changes.outputs.bootstrap == 'true' }}
|
||||
needs: [ prechecks, changes ]
|
||||
uses: ./.github/workflows/bootstrap.yml
|
||||
secrets: inherit
|
||||
unit-tests:
|
||||
if: ${{ github.repository == 'spack/spack' && needs.changes.outputs.core == 'true' }}
|
||||
needs: [ prechecks, changes ]
|
||||
uses: ./.github/workflows/unit_tests.yaml
|
||||
secrets: inherit
|
||||
windows:
|
||||
if: ${{ github.repository == 'spack/spack' && needs.changes.outputs.core == 'true' }}
|
||||
needs: [ prechecks ]
|
||||
uses: ./.github/workflows/windows_python.yml
|
||||
secrets: inherit
|
||||
all:
|
||||
needs: [ windows, unit-tests, bootstrap ]
|
||||
runs-on: ubuntu-latest
|
||||
|
||||
4
.github/workflows/nightly-win-builds.yml
vendored
4
.github/workflows/nightly-win-builds.yml
vendored
@@ -14,10 +14,10 @@ jobs:
|
||||
build-paraview-deps:
|
||||
runs-on: windows-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
|
||||
4
.github/workflows/style/requirements.txt
vendored
4
.github/workflows/style/requirements.txt
vendored
@@ -1,7 +1,7 @@
|
||||
black==24.3.0
|
||||
black==24.4.2
|
||||
clingo==5.7.1
|
||||
flake8==7.0.0
|
||||
isort==5.13.2
|
||||
mypy==1.8.0
|
||||
types-six==1.16.21.9
|
||||
types-six==1.16.21.20240513
|
||||
vermin==1.6.0
|
||||
|
||||
37
.github/workflows/unit_tests.yaml
vendored
37
.github/workflows/unit_tests.yaml
vendored
@@ -51,10 +51,10 @@ jobs:
|
||||
on_develop: false
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: ${{ matrix.python-version }}
|
||||
- name: Install System packages
|
||||
@@ -91,17 +91,19 @@ jobs:
|
||||
UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
|
||||
run: |
|
||||
share/spack/qa/run-unit-tests
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: unittests,linux,${{ matrix.concretizer }}
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
# Test shell integration
|
||||
shell:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: '3.11'
|
||||
- name: Install System packages
|
||||
@@ -122,9 +124,11 @@ jobs:
|
||||
COVERAGE: true
|
||||
run: |
|
||||
share/spack/qa/run-shell-tests
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: shelltests,linux
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
|
||||
# Test RHEL8 UBI with platform Python. This job is run
|
||||
# only on PRs modifying core Spack
|
||||
@@ -137,7 +141,7 @@ jobs:
|
||||
dnf install -y \
|
||||
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
|
||||
make patch tcl unzip which xz
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
- name: Setup repo and non-root user
|
||||
run: |
|
||||
git --version
|
||||
@@ -156,10 +160,10 @@ jobs:
|
||||
clingo-cffi:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: '3.11'
|
||||
- name: Install System packages
|
||||
@@ -181,20 +185,23 @@ jobs:
|
||||
SPACK_TEST_SOLVER: clingo
|
||||
run: |
|
||||
share/spack/qa/run-unit-tests
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab # @v2.1.0
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: unittests,linux,clingo
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
# Run unit tests on MacOS
|
||||
macos:
|
||||
runs-on: macos-latest
|
||||
runs-on: ${{ matrix.os }}
|
||||
strategy:
|
||||
matrix:
|
||||
os: [macos-13, macos-14]
|
||||
python-version: ["3.11"]
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: ${{ matrix.python-version }}
|
||||
- name: Install Python packages
|
||||
@@ -216,6 +223,8 @@ jobs:
|
||||
$(which spack) solve zlib
|
||||
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
|
||||
$(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: unittests,macos
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
|
||||
11
.github/workflows/valid-style.yml
vendored
11
.github/workflows/valid-style.yml
vendored
@@ -18,8 +18,8 @@ jobs:
|
||||
validate:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: '3.11'
|
||||
cache: 'pip'
|
||||
@@ -35,10 +35,10 @@ jobs:
|
||||
style:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: '3.11'
|
||||
cache: 'pip'
|
||||
@@ -56,6 +56,7 @@ jobs:
|
||||
share/spack/qa/run-style-tests
|
||||
audit:
|
||||
uses: ./.github/workflows/audit.yaml
|
||||
secrets: inherit
|
||||
with:
|
||||
with_coverage: ${{ inputs.with_coverage }}
|
||||
python_version: '3.11'
|
||||
@@ -69,7 +70,7 @@ jobs:
|
||||
dnf install -y \
|
||||
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
|
||||
make patch tcl unzip which xz
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633 # @v2
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
- name: Setup repo and non-root user
|
||||
run: |
|
||||
git --version
|
||||
|
||||
20
.github/workflows/windows_python.yml
vendored
20
.github/workflows/windows_python.yml
vendored
@@ -15,10 +15,10 @@ jobs:
|
||||
unit-tests:
|
||||
runs-on: windows-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
@@ -33,16 +33,18 @@ jobs:
|
||||
./share/spack/qa/validate_last_exit.ps1
|
||||
coverage combine -a
|
||||
coverage xml
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: unittests,windows
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
unit-tests-cmd:
|
||||
runs-on: windows-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
@@ -57,16 +59,18 @@ jobs:
|
||||
./share/spack/qa/validate_last_exit.ps1
|
||||
coverage combine -a
|
||||
coverage xml
|
||||
- uses: codecov/codecov-action@54bcd8715eee62d40e33596ef5e8f0f48dbbccab
|
||||
- uses: codecov/codecov-action@125fc84a9a348dbcf27191600683ec096ec9021c
|
||||
with:
|
||||
flags: unittests,windows
|
||||
token: ${{ secrets.CODECOV_TOKEN }}
|
||||
verbose: true
|
||||
build-abseil:
|
||||
runs-on: windows-latest
|
||||
steps:
|
||||
- uses: actions/checkout@9bb56186c3b09b4f86b1c65136769dd318469633
|
||||
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
- uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
|
||||
45
CHANGELOG.md
45
CHANGELOG.md
@@ -1,3 +1,48 @@
|
||||
# v0.21.2 (2024-03-01)
|
||||
|
||||
## Bugfixes
|
||||
|
||||
- Containerize: accommodate nested or pre-existing spack-env paths (#41558)
|
||||
- Fix setup-env script, when going back and forth between instances (#40924)
|
||||
- Fix using fully-qualified namespaces from root specs (#41957)
|
||||
- Fix a bug when a required provider is requested for multiple virtuals (#42088)
|
||||
- OCI buildcaches:
|
||||
- only push in parallel when forking (#42143)
|
||||
- use pickleable errors (#42160)
|
||||
- Fix using sticky variants in externals (#42253)
|
||||
- Fix a rare issue with conditional requirements and multi-valued variants (#42566)
|
||||
|
||||
## Package updates
|
||||
- rust: add v1.75, rework a few variants (#41161,#41903)
|
||||
- py-transformers: add v4.35.2 (#41266)
|
||||
- mgard: fix OpenMP on AppleClang (#42933)
|
||||
|
||||
# v0.21.1 (2024-01-11)
|
||||
|
||||
## New features
|
||||
- Add support for reading buildcaches created by Spack v0.22 (#41773)
|
||||
|
||||
## Bugfixes
|
||||
|
||||
- spack graph: fix coloring with environments (#41240)
|
||||
- spack info: sort variants in --variants-by-name (#41389)
|
||||
- Spec.format: error on old style format strings (#41934)
|
||||
- ASP-based solver:
|
||||
- fix infinite recursion when computing concretization errors (#41061)
|
||||
- don't error for type mismatch on preferences (#41138)
|
||||
- don't emit spurious debug output (#41218)
|
||||
- Improve the error message for deprecated preferences (#41075)
|
||||
- Fix MSVC preview version breaking clingo build on Windows (#41185)
|
||||
- Fix multi-word aliases (#41126)
|
||||
- Add a warning for unconfigured compiler (#41213)
|
||||
- environment: fix an issue with deconcretization/reconcretization of specs (#41294)
|
||||
- buildcache: don't error if a patch is missing, when installing from binaries (#41986)
|
||||
- Multiple improvements to unit-tests (#41215,#41369,#41495,#41359,#41361,#41345,#41342,#41308,#41226)
|
||||
|
||||
## Package updates
|
||||
- root: add a webgui patch to address security issue (#41404)
|
||||
- BerkeleyGW: update source urls (#38218)
|
||||
|
||||
# v0.21.0 (2023-11-11)
|
||||
|
||||
`v0.21.0` is a major feature release.
|
||||
|
||||
@@ -88,7 +88,7 @@ Resources:
|
||||
[bridged](https://github.com/matrix-org/matrix-appservice-slack#matrix-appservice-slack) to Slack.
|
||||
* [**Github Discussions**](https://github.com/spack/spack/discussions):
|
||||
for Q&A and discussions. Note the pinned discussions for announcements.
|
||||
* **Twitter**: [@spackpm](https://twitter.com/spackpm). Be sure to
|
||||
* **X**: [@spackpm](https://twitter.com/spackpm). Be sure to
|
||||
`@mention` us!
|
||||
* **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack):
|
||||
only for announcements. Please use other venues for discussions.
|
||||
|
||||
@@ -144,3 +144,5 @@ switch($SpackSubCommand)
|
||||
"unload" {Invoke-SpackLoad}
|
||||
default {python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs}
|
||||
}
|
||||
|
||||
exit $LASTEXITCODE
|
||||
|
||||
@@ -15,7 +15,7 @@ concretizer:
|
||||
# as possible, rather than building. If `false`, we'll always give you a fresh
|
||||
# concretization. If `dependencies`, we'll only reuse dependencies but
|
||||
# give you a fresh concretization for your root specs.
|
||||
reuse: dependencies
|
||||
reuse: true
|
||||
# Options that tune which targets are considered for concretization. The
|
||||
# concretization process is very sensitive to the number targets, and the time
|
||||
# needed to reach a solution increases noticeably with the number of targets
|
||||
@@ -42,3 +42,8 @@ concretizer:
|
||||
# "minimal": allows the duplication of 'build-tools' nodes only (e.g. py-setuptools, cmake etc.)
|
||||
# "full" (experimental): allows separation of the entire build-tool stack (e.g. the entire "cmake" subDAG)
|
||||
strategy: minimal
|
||||
# Option to specify compatiblity between operating systems for reuse of compilers and packages
|
||||
# Specified as a key: [list] where the key is the os that is being targeted, and the list contains the OS's
|
||||
# it can reuse. Note this is a directional compatibility so mutual compatibility between two OS's
|
||||
# requires two entries i.e. os_compatible: {sonoma: [monterey], monterey: [sonoma]}
|
||||
os_compatible: {}
|
||||
|
||||
@@ -101,6 +101,12 @@ config:
|
||||
verify_ssl: true
|
||||
|
||||
|
||||
# This is where custom certs for proxy/firewall are stored.
|
||||
# It can be a path or environment variable. To match ssl env configuration
|
||||
# the default is the environment variable SSL_CERT_FILE
|
||||
ssl_certs: $SSL_CERT_FILE
|
||||
|
||||
|
||||
# Suppress gpg warnings from binary package verification
|
||||
# Only suppresses warnings, gpg failure will still fail the install
|
||||
# Potential rationale to set True: users have already explicitly trusted the
|
||||
|
||||
19
etc/spack/defaults/cray/packages.yaml
Normal file
19
etc/spack/defaults/cray/packages.yaml
Normal file
@@ -0,0 +1,19 @@
|
||||
# -------------------------------------------------------------------------
|
||||
# This file controls default concretization preferences for Spack.
|
||||
#
|
||||
# Settings here are versioned with Spack and are intended to provide
|
||||
# sensible defaults out of the box. Spack maintainers should edit this
|
||||
# file to keep it current.
|
||||
#
|
||||
# Users can override these settings by editing the following files.
|
||||
#
|
||||
# Per-spack-instance settings (overrides defaults):
|
||||
# $SPACK_ROOT/etc/spack/packages.yaml
|
||||
#
|
||||
# Per-user settings (overrides default and site settings):
|
||||
# ~/.spack/packages.yaml
|
||||
# -------------------------------------------------------------------------
|
||||
packages:
|
||||
all:
|
||||
providers:
|
||||
iconv: [glibc, musl, libiconv]
|
||||
@@ -19,7 +19,6 @@ packages:
|
||||
- apple-clang
|
||||
- clang
|
||||
- gcc
|
||||
- intel
|
||||
providers:
|
||||
elf: [libelf]
|
||||
fuse: [macfuse]
|
||||
|
||||
19
etc/spack/defaults/linux/packages.yaml
Normal file
19
etc/spack/defaults/linux/packages.yaml
Normal file
@@ -0,0 +1,19 @@
|
||||
# -------------------------------------------------------------------------
|
||||
# This file controls default concretization preferences for Spack.
|
||||
#
|
||||
# Settings here are versioned with Spack and are intended to provide
|
||||
# sensible defaults out of the box. Spack maintainers should edit this
|
||||
# file to keep it current.
|
||||
#
|
||||
# Users can override these settings by editing the following files.
|
||||
#
|
||||
# Per-spack-instance settings (overrides defaults):
|
||||
# $SPACK_ROOT/etc/spack/packages.yaml
|
||||
#
|
||||
# Per-user settings (overrides default and site settings):
|
||||
# ~/.spack/packages.yaml
|
||||
# -------------------------------------------------------------------------
|
||||
packages:
|
||||
all:
|
||||
providers:
|
||||
iconv: [glibc, musl, libiconv]
|
||||
@@ -15,15 +15,17 @@
|
||||
# -------------------------------------------------------------------------
|
||||
packages:
|
||||
all:
|
||||
compiler: [gcc, intel, pgi, clang, xl, nag, fj, aocc]
|
||||
compiler: [gcc, clang, oneapi, xl, nag, fj, aocc]
|
||||
providers:
|
||||
awk: [gawk]
|
||||
armci: [armcimpi]
|
||||
blas: [openblas, amdblis]
|
||||
D: [ldc]
|
||||
daal: [intel-oneapi-daal]
|
||||
elf: [elfutils]
|
||||
fftw-api: [fftw, amdfftw]
|
||||
flame: [libflame, amdlibflame]
|
||||
fortran-rt: [gcc-runtime, intel-oneapi-runtime]
|
||||
fuse: [libfuse]
|
||||
gl: [glx, osmesa]
|
||||
glu: [mesa-glu, openglu]
|
||||
@@ -34,9 +36,11 @@ packages:
|
||||
java: [openjdk, jdk, ibm-java]
|
||||
jpeg: [libjpeg-turbo, libjpeg]
|
||||
lapack: [openblas, amdlibflame]
|
||||
libglx: [mesa+glx, mesa18+glx]
|
||||
libc: [glibc, musl]
|
||||
libgfortran: [ gcc-runtime ]
|
||||
libglx: [mesa+glx]
|
||||
libifcore: [ intel-oneapi-runtime ]
|
||||
libllvm: [llvm]
|
||||
libosmesa: [mesa+osmesa, mesa18+osmesa]
|
||||
lua-lang: [lua, lua-luajit-openresty, lua-luajit]
|
||||
luajit: [lua-luajit-openresty, lua-luajit]
|
||||
mariadb-client: [mariadb-c-client, mariadb]
|
||||
|
||||
12
lib/spack/docs/_templates/layout.html
vendored
Normal file
12
lib/spack/docs/_templates/layout.html
vendored
Normal file
@@ -0,0 +1,12 @@
|
||||
{% extends "!layout.html" %}
|
||||
|
||||
{%- block extrahead %}
|
||||
<!-- Google tag (gtag.js) -->
|
||||
<script async src="https://www.googletagmanager.com/gtag/js?id=G-S0PQ7WV75K"></script>
|
||||
<script>
|
||||
window.dataLayer = window.dataLayer || [];
|
||||
function gtag(){dataLayer.push(arguments);}
|
||||
gtag('js', new Date());
|
||||
gtag('config', 'G-S0PQ7WV75K');
|
||||
</script>
|
||||
{% endblock %}
|
||||
@@ -865,7 +865,7 @@ There are several different ways to use Spack packages once you have
|
||||
installed them. As you've seen, spack packages are installed into long
|
||||
paths with hashes, and you need a way to get them into your path. The
|
||||
easiest way is to use :ref:`spack load <cmd-spack-load>`, which is
|
||||
described in the next section.
|
||||
described in this section.
|
||||
|
||||
Some more advanced ways to use Spack packages include:
|
||||
|
||||
@@ -959,7 +959,86 @@ use ``spack find --loaded``.
|
||||
You can also use ``spack load --list`` to get the same output, but it
|
||||
does not have the full set of query options that ``spack find`` offers.
|
||||
|
||||
We'll learn more about Spack's spec syntax in the next section.
|
||||
We'll learn more about Spack's spec syntax in :ref:`a later section <sec-specs>`.
|
||||
|
||||
|
||||
.. _extensions:
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Python packages and virtual environments
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Spack can install a large number of Python packages. Their names are
|
||||
typically prefixed with ``py-``. Installing and using them is no
|
||||
different from any other package:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack install py-numpy
|
||||
$ spack load py-numpy
|
||||
$ python3
|
||||
>>> import numpy
|
||||
|
||||
The ``spack load`` command sets the ``PATH`` variable so that the right Python
|
||||
executable is used, and makes sure that ``numpy`` and its dependencies can be
|
||||
located in the ``PYTHONPATH``.
|
||||
|
||||
Spack is different from other Python package managers in that it installs
|
||||
every package into its *own* prefix. This is in contrast to ``pip``, which
|
||||
installs all packages into the same prefix, be it in a virtual environment
|
||||
or not.
|
||||
|
||||
For many users, **virtual environments** are more convenient than repeated
|
||||
``spack load`` commands, particularly when working with multiple Python
|
||||
packages. Fortunately Spack supports environments itself, which together
|
||||
with a view are no different from Python virtual environments.
|
||||
|
||||
The recommended way of working with Python extensions such as ``py-numpy``
|
||||
is through :ref:`Environments <environments>`. The following example creates
|
||||
a Spack environment with ``numpy`` in the current working directory. It also
|
||||
puts a filesystem view in ``./view``, which is a more traditional combined
|
||||
prefix for all packages in the environment.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env create --with-view view --dir .
|
||||
$ spack -e . add py-numpy
|
||||
$ spack -e . concretize
|
||||
$ spack -e . install
|
||||
|
||||
Now you can activate the environment and start using the packages:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env activate .
|
||||
$ python3
|
||||
>>> import numpy
|
||||
|
||||
The environment view is also a virtual environment, which is useful if you are
|
||||
sharing the environment with others who are unfamiliar with Spack. They can
|
||||
either use the Python executable directly:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ ./view/bin/python3
|
||||
>>> import numpy
|
||||
|
||||
or use the activation script:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ source ./view/bin/activate
|
||||
$ python3
|
||||
>>> import numpy
|
||||
|
||||
In general, there should not be much difference between ``spack env activate``
|
||||
and using the virtual environment. The main advantage of ``spack env activate``
|
||||
is that it knows about more packages than just Python packages, and it may set
|
||||
additional runtime variables that are not covered by the virtual environment
|
||||
activation script.
|
||||
|
||||
See :ref:`environments` for a more in-depth description of Spack
|
||||
environments and customizations to views.
|
||||
|
||||
|
||||
.. _sec-specs:
|
||||
@@ -1119,6 +1198,9 @@ and ``3.4.2``. Similarly, ``@4.2:`` means any version above and including
|
||||
``4.2``. As a short-hand, ``@3`` is equivalent to the range ``@3:3`` and
|
||||
includes any version with major version ``3``.
|
||||
|
||||
Versions are ordered lexicograpically by its components. For more details
|
||||
on the order, see :ref:`the packaging guide <version-comparison>`.
|
||||
|
||||
Notice that you can distinguish between the specific version ``@=3.2`` and
|
||||
the range ``@3.2``. This is useful for packages that follow a versioning
|
||||
scheme that omits the zero patch version number: ``3.2``, ``3.2.1``,
|
||||
@@ -1702,165 +1784,6 @@ check only local packages (as opposed to those used transparently from
|
||||
``upstream`` spack instances) and the ``-j,--json`` option to output
|
||||
machine-readable json data for any errors.
|
||||
|
||||
|
||||
.. _extensions:
|
||||
|
||||
---------------------------
|
||||
Extensions & Python support
|
||||
---------------------------
|
||||
|
||||
Spack's installation model assumes that each package will live in its
|
||||
own install prefix. However, certain packages are typically installed
|
||||
*within* the directory hierarchy of other packages. For example,
|
||||
`Python <https://www.python.org>`_ packages are typically installed in the
|
||||
``$prefix/lib/python-2.7/site-packages`` directory.
|
||||
|
||||
In Spack, installation prefixes are immutable, so this type of installation
|
||||
is not directly supported. However, it is possible to create views that
|
||||
allow you to merge install prefixes of multiple packages into a single new prefix.
|
||||
Views are a convenient way to get a more traditional filesystem structure.
|
||||
Using *extensions*, you can ensure that Python packages always share the
|
||||
same prefix in the view as Python itself. Suppose you have
|
||||
Python installed like so:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack find python
|
||||
==> 1 installed packages.
|
||||
-- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
|
||||
python@2.7.8
|
||||
|
||||
.. _cmd-spack-extensions:
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^
|
||||
``spack extensions``
|
||||
^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
You can find extensions for your Python installation like this:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack extensions python
|
||||
==> python@2.7.8%gcc@4.4.7 arch=linux-debian7-x86_64-703c7a96
|
||||
==> 36 extensions:
|
||||
geos py-ipython py-pexpect py-pyside py-sip
|
||||
py-basemap py-libxml2 py-pil py-pytz py-six
|
||||
py-biopython py-mako py-pmw py-rpy2 py-sympy
|
||||
py-cython py-matplotlib py-pychecker py-scientificpython py-virtualenv
|
||||
py-dateutil py-mpi4py py-pygments py-scikit-learn
|
||||
py-epydoc py-mx py-pylint py-scipy
|
||||
py-gnuplot py-nose py-pyparsing py-setuptools
|
||||
py-h5py py-numpy py-pyqt py-shiboken
|
||||
|
||||
==> 12 installed:
|
||||
-- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
|
||||
py-dateutil@2.4.0 py-nose@1.3.4 py-pyside@1.2.2
|
||||
py-dateutil@2.4.0 py-numpy@1.9.1 py-pytz@2014.10
|
||||
py-ipython@2.3.1 py-pygments@2.0.1 py-setuptools@11.3.1
|
||||
py-matplotlib@1.4.2 py-pyparsing@2.0.3 py-six@1.9.0
|
||||
|
||||
The extensions are a subset of what's returned by ``spack list``, and
|
||||
they are packages like any other. They are installed into their own
|
||||
prefixes, and you can see this with ``spack find --paths``:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack find --paths py-numpy
|
||||
==> 1 installed packages.
|
||||
-- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
|
||||
py-numpy@1.9.1 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/py-numpy@1.9.1-66733244
|
||||
|
||||
However, even though this package is installed, you cannot use it
|
||||
directly when you run ``python``:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack load python
|
||||
$ python
|
||||
Python 2.7.8 (default, Feb 17 2015, 01:35:25)
|
||||
[GCC 4.4.7 20120313 (Red Hat 4.4.7-11)] on linux2
|
||||
Type "help", "copyright", "credits" or "license" for more information.
|
||||
>>> import numpy
|
||||
Traceback (most recent call last):
|
||||
File "<stdin>", line 1, in <module>
|
||||
ImportError: No module named numpy
|
||||
>>>
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Using Extensions in Environments
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
The recommended way of working with extensions such as ``py-numpy``
|
||||
above is through :ref:`Environments <environments>`. For example,
|
||||
the following creates an environment in the current working directory
|
||||
with a filesystem view in the ``./view`` directory:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env create --with-view view --dir .
|
||||
$ spack -e . add py-numpy
|
||||
$ spack -e . concretize
|
||||
$ spack -e . install
|
||||
|
||||
We recommend environments for two reasons. Firstly, environments
|
||||
can be activated (requires :ref:`shell-support`):
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env activate .
|
||||
|
||||
which sets all the right environment variables such as ``PATH`` and
|
||||
``PYTHONPATH``. This ensures that
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ python
|
||||
>>> import numpy
|
||||
|
||||
works. Secondly, even without shell support, the view ensures
|
||||
that Python can locate its extensions:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ ./view/bin/python
|
||||
>>> import numpy
|
||||
|
||||
See :ref:`environments` for a more in-depth description of Spack
|
||||
environments and customizations to views.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^
|
||||
Using ``spack load``
|
||||
^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
A more traditional way of using Spack and extensions is ``spack load``
|
||||
(requires :ref:`shell-support`). This will add the extension to ``PYTHONPATH``
|
||||
in your current shell, and Python itself will be available in the ``PATH``:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack load py-numpy
|
||||
$ python
|
||||
>>> import numpy
|
||||
|
||||
The loaded packages can be checked using ``spack find --loaded``
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Loading Extensions via Modules
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Apart from ``spack env activate`` and ``spack load``, you can load numpy
|
||||
through your environment modules (using ``environment-modules`` or
|
||||
``lmod``). This will also add the extension to the ``PYTHONPATH`` in
|
||||
your current shell.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ module load <name of numpy module>
|
||||
|
||||
If you do not know the name of the specific numpy module you wish to
|
||||
load, you can use the ``spack module tcl|lmod loads`` command to get
|
||||
the name of the module from the Spack spec.
|
||||
|
||||
-----------------------
|
||||
Filesystem requirements
|
||||
-----------------------
|
||||
|
||||
@@ -220,6 +220,40 @@ section of the configuration:
|
||||
|
||||
.. _binary_caches_oci:
|
||||
|
||||
---------------------------------
|
||||
Automatic push to a build cache
|
||||
---------------------------------
|
||||
|
||||
Sometimes it is convenient to push packages to a build cache as soon as they are installed. Spack can do this by setting autopush flag when adding a mirror:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack mirror add --autopush <name> <url or path>
|
||||
|
||||
Or the autopush flag can be set for an existing mirror:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack mirror set --autopush <name> # enable automatic push for an existing mirror
|
||||
$ spack mirror set --no-autopush <name> # disable automatic push for an existing mirror
|
||||
|
||||
Then after installing a package it is automatically pushed to all mirrors with ``autopush: true``. The command
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack install <package>
|
||||
|
||||
will have the same effect as
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack install <package>
|
||||
$ spack buildcache push <cache> <package> # for all caches with autopush: true
|
||||
|
||||
.. note::
|
||||
|
||||
Packages are automatically pushed to a build cache only if they are built from source.
|
||||
|
||||
-----------------------------------------
|
||||
OCI / Docker V2 registries as build cache
|
||||
-----------------------------------------
|
||||
|
||||
@@ -21,23 +21,86 @@ is the following:
|
||||
Reuse already installed packages
|
||||
--------------------------------
|
||||
|
||||
The ``reuse`` attribute controls whether Spack will prefer to use installed packages (``true``), or
|
||||
whether it will do a "fresh" installation and prefer the latest settings from
|
||||
``package.py`` files and ``packages.yaml`` (``false``).
|
||||
You can use:
|
||||
The ``reuse`` attribute controls how aggressively Spack reuses binary packages during concretization. The
|
||||
attribute can either be a single value, or an object for more complex configurations.
|
||||
|
||||
In the former case ("single value") it allows Spack to:
|
||||
|
||||
1. Reuse installed packages and buildcaches for all the specs to be concretized, when ``true``
|
||||
2. Reuse installed packages and buildcaches only for the dependencies of the root specs, when ``dependencies``
|
||||
3. Disregard reusing installed packages and buildcaches, when ``false``
|
||||
|
||||
In case a finer control over which specs are reused is needed, then the value of this attribute can be
|
||||
an object, with the following keys:
|
||||
|
||||
1. ``roots``: if ``true`` root specs are reused, if ``false`` only dependencies of root specs are reused
|
||||
2. ``from``: list of sources from which reused specs are taken
|
||||
|
||||
Each source in ``from`` is itself an object:
|
||||
|
||||
.. list-table:: Attributes for a source or reusable specs
|
||||
:header-rows: 1
|
||||
|
||||
* - Attribute name
|
||||
- Description
|
||||
* - type (mandatory, string)
|
||||
- Can be ``local``, ``buildcache``, or ``external``
|
||||
* - include (optional, list of specs)
|
||||
- If present, reusable specs must match at least one of the constraint in the list
|
||||
* - exclude (optional, list of specs)
|
||||
- If present, reusable specs must not match any of the constraint in the list.
|
||||
|
||||
For instance, the following configuration:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
concretizer:
|
||||
reuse:
|
||||
roots: true
|
||||
from:
|
||||
- type: local
|
||||
include:
|
||||
- "%gcc"
|
||||
- "%clang"
|
||||
|
||||
tells the concretizer to reuse all specs compiled with either ``gcc`` or ``clang``, that are installed
|
||||
in the local store. Any spec from remote buildcaches is disregarded.
|
||||
|
||||
To reduce the boilerplate in configuration files, default values for the ``include`` and
|
||||
``exclude`` options can be pushed up one level:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
concretizer:
|
||||
reuse:
|
||||
roots: true
|
||||
include:
|
||||
- "%gcc"
|
||||
from:
|
||||
- type: local
|
||||
- type: buildcache
|
||||
- type: local
|
||||
include:
|
||||
- "foo %oneapi"
|
||||
|
||||
In the example above we reuse all specs compiled with ``gcc`` from the local store
|
||||
and remote buildcaches, and we also reuse ``foo %oneapi``. Note that the last source of
|
||||
specs override the default ``include`` attribute.
|
||||
|
||||
For one-off concretizations, the are command line arguments for each of the simple "single value"
|
||||
configurations. This means a user can:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
% spack install --reuse <spec>
|
||||
|
||||
to enable reuse for a single installation, and you can use:
|
||||
to enable reuse for a single installation, or:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
spack install --fresh <spec>
|
||||
|
||||
to do a fresh install if ``reuse`` is enabled by default.
|
||||
``reuse: dependencies`` is the default.
|
||||
|
||||
.. seealso::
|
||||
|
||||
|
||||
@@ -147,6 +147,15 @@ example, the ``bash`` shell is used to run the ``autogen.sh`` script.
|
||||
def autoreconf(self, spec, prefix):
|
||||
which("bash")("autogen.sh")
|
||||
|
||||
If the ``package.py`` has build instructions in a separate
|
||||
:ref:`builder class <multiple_build_systems>`, the signature for a phase changes slightly:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
class AutotoolsBuilder(AutotoolsBuilder):
|
||||
def autoreconf(self, pkg, spec, prefix):
|
||||
which("bash")("autogen.sh")
|
||||
|
||||
"""""""""""""""""""""""""""""""""""""""
|
||||
patching configure or Makefile.in files
|
||||
"""""""""""""""""""""""""""""""""""""""
|
||||
|
||||
@@ -25,7 +25,7 @@ use Spack to build packages with the tools.
|
||||
The Spack Python class ``IntelOneapiPackage`` is a base class that is
|
||||
used by ``IntelOneapiCompilers``, ``IntelOneapiMkl``,
|
||||
``IntelOneapiTbb`` and other classes to implement the oneAPI
|
||||
packages. Search for ``oneAPI`` at `<packages.spack.io>`_ for the full
|
||||
packages. Search for ``oneAPI`` at `packages.spack.io <https://packages.spack.io>`_ for the full
|
||||
list of available oneAPI packages, or use::
|
||||
|
||||
spack list -d oneAPI
|
||||
|
||||
@@ -718,23 +718,45 @@ command-line tool, or C/C++/Fortran program with optional Python
|
||||
modules? The former should be prepended with ``py-``, while the
|
||||
latter should not.
|
||||
|
||||
""""""""""""""""""""""
|
||||
extends vs. depends_on
|
||||
""""""""""""""""""""""
|
||||
""""""""""""""""""""""""""""""
|
||||
``extends`` vs. ``depends_on``
|
||||
""""""""""""""""""""""""""""""
|
||||
|
||||
This is very similar to the naming dilemma above, with a slight twist.
|
||||
As mentioned in the :ref:`Packaging Guide <packaging_extensions>`,
|
||||
``extends`` and ``depends_on`` are very similar, but ``extends`` ensures
|
||||
that the extension and extendee share the same prefix in views.
|
||||
This allows the user to import a Python module without
|
||||
having to add that module to ``PYTHONPATH``.
|
||||
|
||||
When deciding between ``extends`` and ``depends_on``, the best rule of
|
||||
thumb is to check the installation prefix. If Python libraries are
|
||||
installed to ``<prefix>/lib/pythonX.Y/site-packages``, then you
|
||||
should use ``extends``. If Python libraries are installed elsewhere
|
||||
or the only files that get installed reside in ``<prefix>/bin``, then
|
||||
don't use ``extends``.
|
||||
Additionally, ``extends("python")`` adds a dependency on the package
|
||||
``python-venv``. This improves isolation from the system, whether
|
||||
it's during the build or at runtime: user and system site packages
|
||||
cannot accidentally be used by any package that ``extends("python")``.
|
||||
|
||||
As a rule of thumb: if a package does not install any Python modules
|
||||
of its own, and merely puts a Python script in the ``bin`` directory,
|
||||
then there is no need for ``extends``. If the package installs modules
|
||||
in the ``site-packages`` directory, it requires ``extends``.
|
||||
|
||||
"""""""""""""""""""""""""""""""""""""
|
||||
Executing ``python`` during the build
|
||||
"""""""""""""""""""""""""""""""""""""
|
||||
|
||||
Whenever you need to execute a Python command or pass the path of the
|
||||
Python interpreter to the build system, it is best to use the global
|
||||
variable ``python`` directly. For example:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
@run_before("install")
|
||||
def recythonize(self):
|
||||
python("setup.py", "clean") # use the `python` global
|
||||
|
||||
As mentioned in the previous section, ``extends("python")`` adds an
|
||||
automatic dependency on ``python-venv``, which is a virtual environment
|
||||
that guarantees build isolation. The ``python`` global always refers to
|
||||
the correct Python interpreter, whether the package uses ``extends("python")``
|
||||
or ``depends_on("python")``.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^
|
||||
Alternatives to Spack
|
||||
|
||||
@@ -145,6 +145,25 @@ hosts when making ``ssl`` connections. Set to ``false`` to disable, and
|
||||
tools like ``curl`` will use their ``--insecure`` options. Disabling
|
||||
this can expose you to attacks. Use at your own risk.
|
||||
|
||||
--------------------
|
||||
``ssl_certs``
|
||||
--------------------
|
||||
|
||||
Path to custom certificats for SSL verification. The value can be a
|
||||
filesytem path, or an environment variable that expands to an absolute file path.
|
||||
The default value is set to the environment variable ``SSL_CERT_FILE``
|
||||
to use the same syntax used by many other applications that automatically
|
||||
detect custom certificates.
|
||||
When ``url_fetch_method:curl`` the ``config:ssl_certs`` should resolve to
|
||||
a single file. Spack will then set the environment variable ``CURL_CA_BUNDLE``
|
||||
in the subprocess calling ``curl``.
|
||||
If ``url_fetch_method:urllib`` then files and directories are supported i.e.
|
||||
``config:ssl_certs:$SSL_CERT_FILE`` or ``config:ssl_certs:$SSL_CERT_DIR``
|
||||
will work.
|
||||
In all cases the expanded path must be absolute for Spack to use the certificates.
|
||||
Certificates relative to an environment can be created by prepending the path variable
|
||||
with the Spack configuration variable``$env``.
|
||||
|
||||
--------------------
|
||||
``checksum``
|
||||
--------------------
|
||||
|
||||
@@ -194,15 +194,15 @@ The OS that are currently supported are summarized in the table below:
|
||||
* - Operating System
|
||||
- Base Image
|
||||
- Spack Image
|
||||
* - Ubuntu 18.04
|
||||
- ``ubuntu:18.04``
|
||||
- ``spack/ubuntu-bionic``
|
||||
* - Ubuntu 20.04
|
||||
- ``ubuntu:20.04``
|
||||
- ``spack/ubuntu-focal``
|
||||
* - Ubuntu 22.04
|
||||
- ``ubuntu:22.04``
|
||||
- ``spack/ubuntu-jammy``
|
||||
* - Ubuntu 24.04
|
||||
- ``ubuntu:24.04``
|
||||
- ``spack/ubuntu-noble``
|
||||
* - CentOS 7
|
||||
- ``centos:7``
|
||||
- ``spack/centos7``
|
||||
@@ -227,12 +227,12 @@ The OS that are currently supported are summarized in the table below:
|
||||
* - Rocky Linux 9
|
||||
- ``rockylinux:9``
|
||||
- ``spack/rockylinux9``
|
||||
* - Fedora Linux 37
|
||||
- ``fedora:37``
|
||||
- ``spack/fedora37``
|
||||
* - Fedora Linux 38
|
||||
- ``fedora:38``
|
||||
- ``spack/fedora38``
|
||||
* - Fedora Linux 39
|
||||
- ``fedora:39``
|
||||
- ``spack/fedora39``
|
||||
* - Fedora Linux 40
|
||||
- ``fedora:40``
|
||||
- ``spack/fedora40``
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -552,11 +552,11 @@ With either interpreter you can run a single command:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack python -c 'import distro; distro.linux_distribution()'
|
||||
('Ubuntu', '18.04', 'Bionic Beaver')
|
||||
$ spack python -c 'from spack.spec import Spec; Spec("python").concretized()'
|
||||
...
|
||||
|
||||
$ spack python -i ipython -c 'import distro; distro.linux_distribution()'
|
||||
Out[1]: ('Ubuntu', '18.04', 'Bionic Beaver')
|
||||
$ spack python -i ipython -c 'from spack.spec import Spec; Spec("python").concretized()'
|
||||
Out[1]: ...
|
||||
|
||||
or a file:
|
||||
|
||||
@@ -1071,9 +1071,9 @@ Announcing a release
|
||||
|
||||
We announce releases in all of the major Spack communication channels.
|
||||
Publishing the release takes care of GitHub. The remaining channels are
|
||||
Twitter, Slack, and the mailing list. Here are the steps:
|
||||
X, Slack, and the mailing list. Here are the steps:
|
||||
|
||||
#. Announce the release on Twitter.
|
||||
#. Announce the release on X.
|
||||
|
||||
* Compose the tweet on the ``@spackpm`` account per the
|
||||
``spack-twitter`` slack channel.
|
||||
|
||||
@@ -142,12 +142,8 @@ user's prompt to begin with the environment name in brackets.
|
||||
$ spack env activate -p myenv
|
||||
[myenv] $ ...
|
||||
|
||||
The ``activate`` command can also be used to create a new environment, if it is
|
||||
not already defined, by adding the ``--create`` flag. Managed and anonymous
|
||||
environments, anonymous environments are explained in the next section,
|
||||
can both be created using the same flags that `spack env create` accepts.
|
||||
If an environment already exists then spack will simply activate it and ignore the
|
||||
create specific flags.
|
||||
The ``activate`` command can also be used to create a new environment if it does not already
|
||||
exist.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
@@ -176,21 +172,36 @@ environment will remove the view from the user environment.
|
||||
Anonymous Environments
|
||||
^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Any directory can be treated as an environment if it contains a file
|
||||
``spack.yaml``. To load an anonymous environment, use:
|
||||
Apart from managed environments, Spack also supports anonymous environments.
|
||||
|
||||
Anonymous environments can be placed in any directory of choice.
|
||||
|
||||
.. note::
|
||||
|
||||
When uninstalling packages, Spack asks the user to confirm the removal of packages
|
||||
that are still used in a managed environment. This is not the case for anonymous
|
||||
environments.
|
||||
|
||||
To create an anonymous environment, use one of the following commands:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env activate -d /path/to/directory
|
||||
$ spack env create --dir my_env
|
||||
$ spack env create ./my_env
|
||||
|
||||
Anonymous specs can be created in place using the command:
|
||||
As a shorthand, you can also create an anonymous environment upon activation if it does not
|
||||
already exist:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env create -d .
|
||||
$ spack env activate --create ./my_env
|
||||
|
||||
For convenience, Spack can also place an anonymous environment in a temporary directory for you:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env activate --temp
|
||||
|
||||
In this case Spack simply creates a ``spack.yaml`` file in the requested
|
||||
directory.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Environment Sensitive Commands
|
||||
@@ -449,6 +460,125 @@ Sourcing that file in Bash will make the environment available to the
|
||||
user; and can be included in ``.bashrc`` files, etc. The ``loads``
|
||||
file may also be copied out of the environment, renamed, etc.
|
||||
|
||||
|
||||
.. _environment_include_concrete:
|
||||
|
||||
------------------------------
|
||||
Included Concrete Environments
|
||||
------------------------------
|
||||
|
||||
Spack environments can create an environment based off of information in already
|
||||
established environments. You can think of it as a combination of existing
|
||||
environments. It will gather information from the existing environment's
|
||||
``spack.lock`` and use that during the creation of this included concrete
|
||||
environment. When an included concrete environment is created it will generate
|
||||
a ``spack.lock`` file for the newly created environment.
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Creating included environments
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
To create a combined concrete environment, you must have at least one existing
|
||||
concrete environment. You will use the command ``spack env create`` with the
|
||||
argument ``--include-concrete`` followed by the name or path of the environment
|
||||
you'd like to include. Here is an example of how to create a combined environment
|
||||
from the command line.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env create myenv
|
||||
$ spack -e myenv add python
|
||||
$ spack -e myenv concretize
|
||||
$ spack env create --include-concrete myenv included_env
|
||||
|
||||
|
||||
You can also include an environment directly in the ``spack.yaml`` file. It
|
||||
involves adding the ``include_concrete`` heading in the yaml followed by the
|
||||
absolute path to the independent environments.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
spack:
|
||||
specs: []
|
||||
concretizer:
|
||||
unify: true
|
||||
include_concrete:
|
||||
- /absolute/path/to/environment1
|
||||
- /absolute/path/to/environment2
|
||||
|
||||
|
||||
Once the ``spack.yaml`` has been updated you must concretize the environment to
|
||||
get the concrete specs from the included environments.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Updating an included environment
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
If changes were made to the base environment and you want that reflected in the
|
||||
included environment you will need to reconcretize both the base environment and the
|
||||
included environment for the change to be implemented. For example:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env create myenv
|
||||
$ spack -e myenv add python
|
||||
$ spack -e myenv concretize
|
||||
$ spack env create --include-concrete myenv included_env
|
||||
|
||||
|
||||
$ spack -e myenv find
|
||||
==> In environment myenv
|
||||
==> Root specs
|
||||
python
|
||||
|
||||
==> 0 installed packages
|
||||
|
||||
|
||||
$ spack -e included_env find
|
||||
==> In environment included_env
|
||||
==> No root specs
|
||||
==> Included specs
|
||||
python
|
||||
|
||||
==> 0 installed packages
|
||||
|
||||
Here we see that ``included_env`` has access to the python package through
|
||||
the ``myenv`` environment. But if we were to add another spec to ``myenv``,
|
||||
``included_env`` will not be able to access the new information.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack -e myenv add perl
|
||||
$ spack -e myenv concretize
|
||||
$ spack -e myenv find
|
||||
==> In environment myenv
|
||||
==> Root specs
|
||||
perl python
|
||||
|
||||
==> 0 installed packages
|
||||
|
||||
|
||||
$ spack -e included_env find
|
||||
==> In environment included_env
|
||||
==> No root specs
|
||||
==> Included specs
|
||||
python
|
||||
|
||||
==> 0 installed packages
|
||||
|
||||
It isn't until you run the ``spack concretize`` command that the combined
|
||||
environment will get the updated information from the reconcretized base environmennt.
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack -e included_env concretize
|
||||
$ spack -e included_env find
|
||||
==> In environment included_env
|
||||
==> No root specs
|
||||
==> Included specs
|
||||
perl python
|
||||
|
||||
==> 0 installed packages
|
||||
|
||||
.. _environment-configuration:
|
||||
|
||||
------------------------
|
||||
@@ -800,6 +930,7 @@ For example, the following environment has three root packages:
|
||||
This allows for a much-needed reduction in redundancy between packages
|
||||
and constraints.
|
||||
|
||||
|
||||
----------------
|
||||
Filesystem Views
|
||||
----------------
|
||||
@@ -1033,7 +1164,7 @@ other targets to depend on the environment installation.
|
||||
|
||||
A typical workflow is as follows:
|
||||
|
||||
.. code:: console
|
||||
.. code-block:: console
|
||||
|
||||
spack env create -d .
|
||||
spack -e . add perl
|
||||
@@ -1126,7 +1257,7 @@ its dependencies. This can be useful when certain flags should only apply to
|
||||
dependencies. Below we show a use case where a spec is installed with verbose
|
||||
output (``spack install --verbose``) while its dependencies are installed silently:
|
||||
|
||||
.. code:: console
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env depfile -o Makefile
|
||||
|
||||
@@ -1148,7 +1279,7 @@ This can be accomplished through the generated ``[<prefix>/]SPACK_PACKAGE_IDS``
|
||||
variable. Assuming we have an active and concrete environment, we generate the
|
||||
associated ``Makefile`` with a prefix ``example``:
|
||||
|
||||
.. code:: console
|
||||
.. code-block:: console
|
||||
|
||||
$ spack env depfile -o env.mk --make-prefix example
|
||||
|
||||
|
||||
@@ -478,6 +478,13 @@ prefix, you can add them to the ``extra_attributes`` field. Similarly,
|
||||
all other fields from the compilers config can be added to the
|
||||
``extra_attributes`` field for an external representing a compiler.
|
||||
|
||||
Note that the format for the ``paths`` field in the
|
||||
``extra_attributes`` section is different than in the ``compilers``
|
||||
config. For compilers configured as external packages, the section is
|
||||
named ``compilers`` and the dictionary maps language names (``c``,
|
||||
``cxx``, ``fortran``) to paths, rather than using the names ``cc``,
|
||||
``fc``, and ``f77``.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
@@ -493,11 +500,10 @@ all other fields from the compilers config can be added to the
|
||||
- spec: llvm+clang@15.0.0 arch=linux-rhel8-skylake
|
||||
prefix: /usr
|
||||
extra_attributes:
|
||||
paths:
|
||||
cc: /usr/bin/clang-with-suffix
|
||||
compilers:
|
||||
c: /usr/bin/clang-with-suffix
|
||||
cxx: /usr/bin/clang++-with-extra-info
|
||||
fc: /usr/bin/gfortran
|
||||
f77: /usr/bin/gfortran
|
||||
fortran: /usr/bin/gfortran
|
||||
extra_rpaths:
|
||||
- /usr/lib/llvm/
|
||||
|
||||
@@ -1572,6 +1578,8 @@ Microsoft Visual Studio
|
||||
"""""""""""""""""""""""
|
||||
|
||||
Microsoft Visual Studio provides the only Windows C/C++ compiler that is currently supported by Spack.
|
||||
Spack additionally requires that the Windows SDK (including WGL) to be installed as part of your
|
||||
visual studio installation as it is required to build many packages from source.
|
||||
|
||||
We require several specific components to be included in the Visual Studio installation.
|
||||
One is the C/C++ toolset, which can be selected as "Desktop development with C++" or "C++ build tools,"
|
||||
@@ -1579,6 +1587,7 @@ depending on installation type (Professional, Build Tools, etc.) The other requ
|
||||
"C++ CMake tools for Windows," which can be selected from among the optional packages.
|
||||
This provides CMake and Ninja for use during Spack configuration.
|
||||
|
||||
|
||||
If you already have Visual Studio installed, you can make sure these components are installed by
|
||||
rerunning the installer. Next to your installation, select "Modify" and look at the
|
||||
"Installation details" pane on the right.
|
||||
|
||||
@@ -893,26 +893,50 @@ as an option to the ``version()`` directive. Example situations would be a
|
||||
"snapshot"-like Version Control System (VCS) tag, a VCS branch such as
|
||||
``v6-16-00-patches``, or a URL specifying a regularly updated snapshot tarball.
|
||||
|
||||
|
||||
.. _version-comparison:
|
||||
|
||||
^^^^^^^^^^^^^^^^^^
|
||||
Version comparison
|
||||
^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Spack imposes a generic total ordering on the set of versions,
|
||||
independently from the package they are associated with.
|
||||
|
||||
Most Spack versions are numeric, a tuple of integers; for example,
|
||||
``0.1``, ``6.96`` or ``1.2.3.1``. Spack knows how to compare and sort
|
||||
numeric versions.
|
||||
``0.1``, ``6.96`` or ``1.2.3.1``. In this very basic case, version
|
||||
comparison is lexicographical on the numeric components:
|
||||
``1.2 < 1.2.1 < 1.2.2 < 1.10``.
|
||||
|
||||
Some Spack versions involve slight extensions of numeric syntax; for
|
||||
example, ``py-sphinx-rtd-theme@=0.1.10a0``. In this case, numbers are
|
||||
always considered to be "newer" than letters. This is for consistency
|
||||
with `RPM <https://bugzilla.redhat.com/show_bug.cgi?id=50977>`_.
|
||||
Spack can also supports string components such as ``1.1.1a`` and
|
||||
``1.y.0``. String components are considered less than numeric
|
||||
components, so ``1.y.0 < 1.0``. This is for consistency with
|
||||
`RPM <https://bugzilla.redhat.com/show_bug.cgi?id=50977>`_. String
|
||||
components do not have to be separated by dots or any other delimiter.
|
||||
So, the contrived version ``1y0`` is identical to ``1.y.0``.
|
||||
|
||||
Spack versions may also be arbitrary non-numeric strings, for example
|
||||
``develop``, ``master``, ``local``.
|
||||
Pre-release suffixes also contain string parts, but they are handled
|
||||
in a special way. For example ``1.2.3alpha1`` is parsed as a pre-release
|
||||
of the version ``1.2.3``. This allows Spack to order it before the
|
||||
actual release: ``1.2.3alpha1 < 1.2.3``. Spack supports alpha, beta and
|
||||
release candidate suffixes: ``1.2alpha1 < 1.2beta1 < 1.2rc1 < 1.2``. Any
|
||||
suffix not recognized as a pre-release is treated as an ordinary
|
||||
string component, so ``1.2 < 1.2-mysuffix``.
|
||||
|
||||
The order on versions is defined as follows. A version string is split
|
||||
into a list of components based on delimiters such as ``.``, ``-`` etc.
|
||||
Lists are then ordered lexicographically, where components are ordered
|
||||
as follows:
|
||||
Finally, there are a few special string components that are considered
|
||||
"infinity versions". They include ``develop``, ``main``, ``master``,
|
||||
``head``, ``trunk``, and ``stable``. For example: ``1.2 < develop``.
|
||||
These are useful for specifying the most recent development version of
|
||||
a package (often a moving target like a git branch), without assigning
|
||||
a specific version number. Infinity versions are not automatically used when determining the latest version of a package unless explicitly required by another package or user.
|
||||
|
||||
More formally, the order on versions is defined as follows. A version
|
||||
string is split into a list of components based on delimiters such as
|
||||
``.`` and ``-`` and string boundaries. The components are split into
|
||||
the **release** and a possible **pre-release** (if the last component
|
||||
is numeric and the second to last is a string ``alpha``, ``beta`` or ``rc``).
|
||||
The release components are ordered lexicographically, with comparsion
|
||||
between different types of components as follows:
|
||||
|
||||
#. The following special strings are considered larger than any other
|
||||
numeric or non-numeric version component, and satisfy the following
|
||||
@@ -925,6 +949,9 @@ as follows:
|
||||
#. All other non-numeric components are less than numeric components,
|
||||
and are ordered alphabetically.
|
||||
|
||||
Finally, if the release components are equal, the pre-release components
|
||||
are used to break the tie, in the obvious way.
|
||||
|
||||
The logic behind this sort order is two-fold:
|
||||
|
||||
#. Non-numeric versions are usually used for special cases while
|
||||
@@ -6408,9 +6435,12 @@ the ``paths`` attribute:
|
||||
echo "Target: x86_64-pc-linux-gnu"
|
||||
echo "Thread model: posix"
|
||||
echo "InstalledDir: /usr/bin"
|
||||
platforms: ["linux", "darwin"]
|
||||
results:
|
||||
- spec: 'llvm@3.9.1 +clang~lld~lldb'
|
||||
|
||||
If the ``platforms`` attribute is present, tests are run only if the current host
|
||||
matches one of the listed platforms.
|
||||
Each test is performed by first creating a temporary directory structure as
|
||||
specified in the corresponding ``layout`` and by then running
|
||||
package detection and checking that the outcome matches the expected
|
||||
@@ -6444,6 +6474,10 @@ package detection and checking that the outcome matches the expected
|
||||
- A spec that is expected from detection
|
||||
- Any valid spec
|
||||
- Yes
|
||||
* - ``results:[0]:extra_attributes``
|
||||
- Extra attributes expected on the associated Spec
|
||||
- Nested dictionary with string as keys, and regular expressions as leaf values
|
||||
- No
|
||||
|
||||
"""""""""""""""""""""""""""""""
|
||||
Reuse tests from other packages
|
||||
|
||||
@@ -476,9 +476,3 @@ implemented using Python's built-in `sys.path
|
||||
:py:mod:`spack.repo` module implements a custom `Python importer
|
||||
<https://docs.python.org/2/library/imp.html>`_.
|
||||
|
||||
.. warning::
|
||||
|
||||
The mechanism for extending packages is not yet extensively tested,
|
||||
and extending packages across repositories imposes inter-repo
|
||||
dependencies, which may be hard to manage. Use this feature at your
|
||||
own risk, but let us know if you have a use case for it.
|
||||
|
||||
@@ -2,12 +2,12 @@ sphinx==7.2.6
|
||||
sphinxcontrib-programoutput==0.17
|
||||
sphinx_design==0.5.0
|
||||
sphinx-rtd-theme==2.0.0
|
||||
python-levenshtein==0.25.0
|
||||
python-levenshtein==0.25.1
|
||||
docutils==0.20.1
|
||||
pygments==2.17.2
|
||||
pygments==2.18.0
|
||||
urllib3==2.2.1
|
||||
pytest==8.1.1
|
||||
pytest==8.2.1
|
||||
isort==5.13.2
|
||||
black==24.3.0
|
||||
black==24.4.2
|
||||
flake8==7.0.0
|
||||
mypy==1.9.0
|
||||
mypy==1.10.0
|
||||
|
||||
255
lib/spack/env/cc
vendored
255
lib/spack/env/cc
vendored
@@ -47,7 +47,8 @@ SPACK_F77_RPATH_ARG
|
||||
SPACK_FC_RPATH_ARG
|
||||
SPACK_LINKER_ARG
|
||||
SPACK_SHORT_SPEC
|
||||
SPACK_SYSTEM_DIRS"
|
||||
SPACK_SYSTEM_DIRS
|
||||
SPACK_MANAGED_DIRS"
|
||||
|
||||
# Optional parameters that aren't required to be set
|
||||
|
||||
@@ -173,22 +174,6 @@ preextend() {
|
||||
unset IFS
|
||||
}
|
||||
|
||||
# system_dir PATH
|
||||
# test whether a path is a system directory
|
||||
system_dir() {
|
||||
IFS=':' # SPACK_SYSTEM_DIRS is colon-separated
|
||||
path="$1"
|
||||
for sd in $SPACK_SYSTEM_DIRS; do
|
||||
if [ "${path}" = "${sd}" ] || [ "${path}" = "${sd}/" ]; then
|
||||
# success if path starts with a system prefix
|
||||
unset IFS
|
||||
return 0
|
||||
fi
|
||||
done
|
||||
unset IFS
|
||||
return 1 # fail if path starts no system prefix
|
||||
}
|
||||
|
||||
# Fail with a clear message if the input contains any bell characters.
|
||||
if eval "[ \"\${*#*${lsep}}\" != \"\$*\" ]"; then
|
||||
die "Compiler command line contains our separator ('${lsep}'). Cannot parse."
|
||||
@@ -201,6 +186,18 @@ for param in $params; do
|
||||
fi
|
||||
done
|
||||
|
||||
# eval this because SPACK_MANAGED_DIRS and SPACK_SYSTEM_DIRS are inputs we don't wanna loop over.
|
||||
# moving the eval inside the function would eval it every call.
|
||||
eval "\
|
||||
path_order() {
|
||||
case \"\$1\" in
|
||||
$SPACK_MANAGED_DIRS) return 0 ;;
|
||||
$SPACK_SYSTEM_DIRS) return 2 ;;
|
||||
/*) return 1 ;;
|
||||
esac
|
||||
}
|
||||
"
|
||||
|
||||
# Check if optional parameters are defined
|
||||
# If we aren't asking for debug flags, don't add them
|
||||
if [ -z "${SPACK_ADD_DEBUG_FLAGS:-}" ]; then
|
||||
@@ -248,7 +245,7 @@ case "$command" in
|
||||
lang_flags=C
|
||||
debug_flags="-g"
|
||||
;;
|
||||
c++|CC|g++|clang++|armclang++|icpc|icpx|dpcpp|pgc++|nvc++|xlc++|xlc++_r|FCC|amdclang++|crayCC)
|
||||
c++|CC|g++|clang++|armclang++|icpc|icpx|pgc++|nvc++|xlc++|xlc++_r|FCC|amdclang++|crayCC)
|
||||
command="$SPACK_CXX"
|
||||
language="C++"
|
||||
comp="CXX"
|
||||
@@ -420,11 +417,12 @@ input_command="$*"
|
||||
parse_Wl() {
|
||||
while [ $# -ne 0 ]; do
|
||||
if [ "$wl_expect_rpath" = yes ]; then
|
||||
if system_dir "$1"; then
|
||||
append return_system_rpath_dirs_list "$1"
|
||||
else
|
||||
append return_rpath_dirs_list "$1"
|
||||
fi
|
||||
path_order "$1"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$1" ;;
|
||||
1) append return_rpath_dirs_list "$1" ;;
|
||||
2) append return_system_rpath_dirs_list "$1" ;;
|
||||
esac
|
||||
wl_expect_rpath=no
|
||||
else
|
||||
case "$1" in
|
||||
@@ -432,21 +430,25 @@ parse_Wl() {
|
||||
arg="${1#-rpath=}"
|
||||
if [ -z "$arg" ]; then
|
||||
shift; continue
|
||||
elif system_dir "$arg"; then
|
||||
append return_system_rpath_dirs_list "$arg"
|
||||
else
|
||||
append return_rpath_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$arg" ;;
|
||||
1) append return_rpath_dirs_list "$arg" ;;
|
||||
2) append return_system_rpath_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
--rpath=*)
|
||||
arg="${1#--rpath=}"
|
||||
if [ -z "$arg" ]; then
|
||||
shift; continue
|
||||
elif system_dir "$arg"; then
|
||||
append return_system_rpath_dirs_list "$arg"
|
||||
else
|
||||
append return_rpath_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$arg" ;;
|
||||
1) append return_rpath_dirs_list "$arg" ;;
|
||||
2) append return_system_rpath_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
-rpath|--rpath)
|
||||
wl_expect_rpath=yes
|
||||
@@ -473,12 +475,20 @@ categorize_arguments() {
|
||||
|
||||
return_other_args_list=""
|
||||
return_isystem_was_used=""
|
||||
|
||||
return_isystem_spack_store_include_dirs_list=""
|
||||
return_isystem_system_include_dirs_list=""
|
||||
return_isystem_include_dirs_list=""
|
||||
|
||||
return_spack_store_include_dirs_list=""
|
||||
return_system_include_dirs_list=""
|
||||
return_include_dirs_list=""
|
||||
|
||||
return_spack_store_lib_dirs_list=""
|
||||
return_system_lib_dirs_list=""
|
||||
return_lib_dirs_list=""
|
||||
|
||||
return_spack_store_rpath_dirs_list=""
|
||||
return_system_rpath_dirs_list=""
|
||||
return_rpath_dirs_list=""
|
||||
|
||||
@@ -526,7 +536,7 @@ categorize_arguments() {
|
||||
continue
|
||||
fi
|
||||
|
||||
replaced="$after$stripped"
|
||||
replaced="$after$stripped"
|
||||
|
||||
# it matched, remove it
|
||||
shift
|
||||
@@ -546,29 +556,32 @@ categorize_arguments() {
|
||||
arg="${1#-isystem}"
|
||||
return_isystem_was_used=true
|
||||
if [ -z "$arg" ]; then shift; arg="$1"; fi
|
||||
if system_dir "$arg"; then
|
||||
append return_isystem_system_include_dirs_list "$arg"
|
||||
else
|
||||
append return_isystem_include_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_isystem_spack_store_include_dirs_list "$arg" ;;
|
||||
1) append return_isystem_include_dirs_list "$arg" ;;
|
||||
2) append return_isystem_system_include_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
-I*)
|
||||
arg="${1#-I}"
|
||||
if [ -z "$arg" ]; then shift; arg="$1"; fi
|
||||
if system_dir "$arg"; then
|
||||
append return_system_include_dirs_list "$arg"
|
||||
else
|
||||
append return_include_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_include_dirs_list "$arg" ;;
|
||||
1) append return_include_dirs_list "$arg" ;;
|
||||
2) append return_system_include_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
-L*)
|
||||
arg="${1#-L}"
|
||||
if [ -z "$arg" ]; then shift; arg="$1"; fi
|
||||
if system_dir "$arg"; then
|
||||
append return_system_lib_dirs_list "$arg"
|
||||
else
|
||||
append return_lib_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_lib_dirs_list "$arg" ;;
|
||||
1) append return_lib_dirs_list "$arg" ;;
|
||||
2) append return_system_lib_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
-l*)
|
||||
# -loopopt=0 is generated erroneously in autoconf <= 2.69,
|
||||
@@ -601,29 +614,32 @@ categorize_arguments() {
|
||||
break
|
||||
elif [ "$xlinker_expect_rpath" = yes ]; then
|
||||
# Register the path of -Xlinker -rpath <other args> -Xlinker <path>
|
||||
if system_dir "$1"; then
|
||||
append return_system_rpath_dirs_list "$1"
|
||||
else
|
||||
append return_rpath_dirs_list "$1"
|
||||
fi
|
||||
path_order "$1"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$1" ;;
|
||||
1) append return_rpath_dirs_list "$1" ;;
|
||||
2) append return_system_rpath_dirs_list "$1" ;;
|
||||
esac
|
||||
xlinker_expect_rpath=no
|
||||
else
|
||||
case "$1" in
|
||||
-rpath=*)
|
||||
arg="${1#-rpath=}"
|
||||
if system_dir "$arg"; then
|
||||
append return_system_rpath_dirs_list "$arg"
|
||||
else
|
||||
append return_rpath_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$arg" ;;
|
||||
1) append return_rpath_dirs_list "$arg" ;;
|
||||
2) append return_system_rpath_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
--rpath=*)
|
||||
arg="${1#--rpath=}"
|
||||
if system_dir "$arg"; then
|
||||
append return_system_rpath_dirs_list "$arg"
|
||||
else
|
||||
append return_rpath_dirs_list "$arg"
|
||||
fi
|
||||
path_order "$arg"
|
||||
case $? in
|
||||
0) append return_spack_store_rpath_dirs_list "$arg" ;;
|
||||
1) append return_rpath_dirs_list "$arg" ;;
|
||||
2) append return_system_rpath_dirs_list "$arg" ;;
|
||||
esac
|
||||
;;
|
||||
-rpath|--rpath)
|
||||
xlinker_expect_rpath=yes
|
||||
@@ -661,16 +677,25 @@ categorize_arguments() {
|
||||
}
|
||||
|
||||
categorize_arguments "$@"
|
||||
include_dirs_list="$return_include_dirs_list"
|
||||
lib_dirs_list="$return_lib_dirs_list"
|
||||
rpath_dirs_list="$return_rpath_dirs_list"
|
||||
system_include_dirs_list="$return_system_include_dirs_list"
|
||||
system_lib_dirs_list="$return_system_lib_dirs_list"
|
||||
system_rpath_dirs_list="$return_system_rpath_dirs_list"
|
||||
isystem_was_used="$return_isystem_was_used"
|
||||
isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
|
||||
isystem_include_dirs_list="$return_isystem_include_dirs_list"
|
||||
other_args_list="$return_other_args_list"
|
||||
|
||||
spack_store_include_dirs_list="$return_spack_store_include_dirs_list"
|
||||
system_include_dirs_list="$return_system_include_dirs_list"
|
||||
include_dirs_list="$return_include_dirs_list"
|
||||
|
||||
spack_store_lib_dirs_list="$return_spack_store_lib_dirs_list"
|
||||
system_lib_dirs_list="$return_system_lib_dirs_list"
|
||||
lib_dirs_list="$return_lib_dirs_list"
|
||||
|
||||
spack_store_rpath_dirs_list="$return_spack_store_rpath_dirs_list"
|
||||
system_rpath_dirs_list="$return_system_rpath_dirs_list"
|
||||
rpath_dirs_list="$return_rpath_dirs_list"
|
||||
|
||||
isystem_spack_store_include_dirs_list="$return_isystem_spack_store_include_dirs_list"
|
||||
isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
|
||||
isystem_include_dirs_list="$return_isystem_include_dirs_list"
|
||||
|
||||
isystem_was_used="$return_isystem_was_used"
|
||||
other_args_list="$return_other_args_list"
|
||||
|
||||
#
|
||||
# Add flags from Spack's cppflags, cflags, cxxflags, fcflags, fflags, and
|
||||
@@ -730,7 +755,7 @@ esac
|
||||
|
||||
# Linker flags
|
||||
case "$mode" in
|
||||
ld|ccld)
|
||||
ccld)
|
||||
extend spack_flags_list SPACK_LDFLAGS
|
||||
;;
|
||||
esac
|
||||
@@ -738,16 +763,25 @@ esac
|
||||
IFS="$lsep"
|
||||
categorize_arguments $spack_flags_list
|
||||
unset IFS
|
||||
spack_flags_include_dirs_list="$return_include_dirs_list"
|
||||
spack_flags_lib_dirs_list="$return_lib_dirs_list"
|
||||
spack_flags_rpath_dirs_list="$return_rpath_dirs_list"
|
||||
spack_flags_system_include_dirs_list="$return_system_include_dirs_list"
|
||||
spack_flags_system_lib_dirs_list="$return_system_lib_dirs_list"
|
||||
spack_flags_system_rpath_dirs_list="$return_system_rpath_dirs_list"
|
||||
spack_flags_isystem_was_used="$return_isystem_was_used"
|
||||
spack_flags_isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
|
||||
spack_flags_isystem_include_dirs_list="$return_isystem_include_dirs_list"
|
||||
spack_flags_other_args_list="$return_other_args_list"
|
||||
|
||||
spack_flags_isystem_spack_store_include_dirs_list="$return_isystem_spack_store_include_dirs_list"
|
||||
spack_flags_isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
|
||||
spack_flags_isystem_include_dirs_list="$return_isystem_include_dirs_list"
|
||||
|
||||
spack_flags_spack_store_include_dirs_list="$return_spack_store_include_dirs_list"
|
||||
spack_flags_system_include_dirs_list="$return_system_include_dirs_list"
|
||||
spack_flags_include_dirs_list="$return_include_dirs_list"
|
||||
|
||||
spack_flags_spack_store_lib_dirs_list="$return_spack_store_lib_dirs_list"
|
||||
spack_flags_system_lib_dirs_list="$return_system_lib_dirs_list"
|
||||
spack_flags_lib_dirs_list="$return_lib_dirs_list"
|
||||
|
||||
spack_flags_spack_store_rpath_dirs_list="$return_spack_store_rpath_dirs_list"
|
||||
spack_flags_system_rpath_dirs_list="$return_system_rpath_dirs_list"
|
||||
spack_flags_rpath_dirs_list="$return_rpath_dirs_list"
|
||||
|
||||
spack_flags_isystem_was_used="$return_isystem_was_used"
|
||||
spack_flags_other_args_list="$return_other_args_list"
|
||||
|
||||
|
||||
# On macOS insert headerpad_max_install_names linker flag
|
||||
@@ -767,11 +801,13 @@ if [ "$mode" = ccld ] || [ "$mode" = ld ]; then
|
||||
# Append RPATH directories. Note that in the case of the
|
||||
# top-level package these directories may not exist yet. For dependencies
|
||||
# it is assumed that paths have already been confirmed.
|
||||
extend spack_store_rpath_dirs_list SPACK_STORE_RPATH_DIRS
|
||||
extend rpath_dirs_list SPACK_RPATH_DIRS
|
||||
fi
|
||||
fi
|
||||
|
||||
if [ "$mode" = ccld ] || [ "$mode" = ld ]; then
|
||||
extend spack_store_lib_dirs_list SPACK_STORE_LINK_DIRS
|
||||
extend lib_dirs_list SPACK_LINK_DIRS
|
||||
fi
|
||||
|
||||
@@ -798,38 +834,50 @@ case "$mode" in
|
||||
;;
|
||||
esac
|
||||
|
||||
case "$mode" in
|
||||
cpp|cc|as|ccld)
|
||||
if [ "$spack_flags_isystem_was_used" = "true" ] || [ "$isystem_was_used" = "true" ]; then
|
||||
extend isystem_spack_store_include_dirs_list SPACK_STORE_INCLUDE_DIRS
|
||||
extend isystem_include_dirs_list SPACK_INCLUDE_DIRS
|
||||
else
|
||||
extend spack_store_include_dirs_list SPACK_STORE_INCLUDE_DIRS
|
||||
extend include_dirs_list SPACK_INCLUDE_DIRS
|
||||
fi
|
||||
;;
|
||||
esac
|
||||
|
||||
#
|
||||
# Finally, reassemble the command line.
|
||||
#
|
||||
args_list="$flags_list"
|
||||
|
||||
# Insert include directories just prior to any system include directories
|
||||
# Include search paths partitioned by (in store, non-sytem, system)
|
||||
# NOTE: adding ${lsep} to the prefix here turns every added element into two
|
||||
extend args_list spack_flags_include_dirs_list "-I"
|
||||
extend args_list include_dirs_list "-I"
|
||||
extend args_list spack_flags_spack_store_include_dirs_list -I
|
||||
extend args_list spack_store_include_dirs_list -I
|
||||
|
||||
extend args_list spack_flags_include_dirs_list -I
|
||||
extend args_list include_dirs_list -I
|
||||
|
||||
extend args_list spack_flags_isystem_spack_store_include_dirs_list "-isystem${lsep}"
|
||||
extend args_list isystem_spack_store_include_dirs_list "-isystem${lsep}"
|
||||
|
||||
extend args_list spack_flags_isystem_include_dirs_list "-isystem${lsep}"
|
||||
extend args_list isystem_include_dirs_list "-isystem${lsep}"
|
||||
|
||||
case "$mode" in
|
||||
cpp|cc|as|ccld)
|
||||
if [ "$spack_flags_isystem_was_used" = "true" ]; then
|
||||
extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
|
||||
elif [ "$isystem_was_used" = "true" ]; then
|
||||
extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
|
||||
else
|
||||
extend args_list SPACK_INCLUDE_DIRS "-I"
|
||||
fi
|
||||
;;
|
||||
esac
|
||||
|
||||
extend args_list spack_flags_system_include_dirs_list -I
|
||||
extend args_list system_include_dirs_list -I
|
||||
|
||||
extend args_list spack_flags_isystem_system_include_dirs_list "-isystem${lsep}"
|
||||
extend args_list isystem_system_include_dirs_list "-isystem${lsep}"
|
||||
|
||||
# Library search paths
|
||||
# Library search paths partitioned by (in store, non-sytem, system)
|
||||
extend args_list spack_flags_spack_store_lib_dirs_list "-L"
|
||||
extend args_list spack_store_lib_dirs_list "-L"
|
||||
|
||||
extend args_list spack_flags_lib_dirs_list "-L"
|
||||
extend args_list lib_dirs_list "-L"
|
||||
|
||||
extend args_list spack_flags_system_lib_dirs_list "-L"
|
||||
extend args_list system_lib_dirs_list "-L"
|
||||
|
||||
@@ -839,8 +887,12 @@ case "$mode" in
|
||||
if [ -n "$dtags_to_add" ] ; then
|
||||
append args_list "$linker_arg$dtags_to_add"
|
||||
fi
|
||||
extend args_list spack_flags_spack_store_rpath_dirs_list "$rpath"
|
||||
extend args_list spack_store_rpath_dirs_list "$rpath"
|
||||
|
||||
extend args_list spack_flags_rpath_dirs_list "$rpath"
|
||||
extend args_list rpath_dirs_list "$rpath"
|
||||
|
||||
extend args_list spack_flags_system_rpath_dirs_list "$rpath"
|
||||
extend args_list system_rpath_dirs_list "$rpath"
|
||||
;;
|
||||
@@ -848,8 +900,12 @@ case "$mode" in
|
||||
if [ -n "$dtags_to_add" ] ; then
|
||||
append args_list "$dtags_to_add"
|
||||
fi
|
||||
extend args_list spack_flags_spack_store_rpath_dirs_list "-rpath${lsep}"
|
||||
extend args_list spack_store_rpath_dirs_list "-rpath${lsep}"
|
||||
|
||||
extend args_list spack_flags_rpath_dirs_list "-rpath${lsep}"
|
||||
extend args_list rpath_dirs_list "-rpath${lsep}"
|
||||
|
||||
extend args_list spack_flags_system_rpath_dirs_list "-rpath${lsep}"
|
||||
extend args_list system_rpath_dirs_list "-rpath${lsep}"
|
||||
;;
|
||||
@@ -913,4 +969,3 @@ fi
|
||||
# Execute the full command, preserving spaces with IFS set
|
||||
# to the alarm bell separator.
|
||||
IFS="$lsep"; exec $full_command_list
|
||||
|
||||
|
||||
2
lib/spack/external/__init__.py
vendored
2
lib/spack/external/__init__.py
vendored
@@ -18,7 +18,7 @@
|
||||
|
||||
* Homepage: https://pypi.python.org/pypi/archspec
|
||||
* Usage: Labeling, comparison and detection of microarchitectures
|
||||
* Version: 0.2.3 (commit 7b8fe60b69e2861e7dac104bc1c183decfcd3daf)
|
||||
* Version: 0.2.4 (commit 48b92512b9ce203ded0ebd1ac41b42593e931f7c)
|
||||
|
||||
astunparse
|
||||
----------------
|
||||
|
||||
@@ -497,7 +497,7 @@ def copy_attributes(self, t, memo=None):
|
||||
Tag.attrib, merge_attrib]:
|
||||
if hasattr(self, a):
|
||||
if memo is not None:
|
||||
setattr(t, a, copy.deepcopy(getattr(self, a, memo)))
|
||||
setattr(t, a, copy.deepcopy(getattr(self, a), memo))
|
||||
else:
|
||||
setattr(t, a, getattr(self, a))
|
||||
# fmt: on
|
||||
|
||||
2
lib/spack/external/archspec/__init__.py
vendored
2
lib/spack/external/archspec/__init__.py
vendored
@@ -1,3 +1,3 @@
|
||||
"""Init file to avoid namespace packages"""
|
||||
|
||||
__version__ = "0.2.3"
|
||||
__version__ = "0.2.4"
|
||||
|
||||
9
lib/spack/external/archspec/cpu/__init__.py
vendored
9
lib/spack/external/archspec/cpu/__init__.py
vendored
@@ -5,9 +5,10 @@
|
||||
"""The "cpu" package permits to query and compare different
|
||||
CPU microarchitectures.
|
||||
"""
|
||||
from .detect import host
|
||||
from .detect import brand_string, host
|
||||
from .microarchitecture import (
|
||||
TARGETS,
|
||||
InvalidCompilerVersion,
|
||||
Microarchitecture,
|
||||
UnsupportedMicroarchitecture,
|
||||
generic_microarchitecture,
|
||||
@@ -15,10 +16,12 @@
|
||||
)
|
||||
|
||||
__all__ = [
|
||||
"brand_string",
|
||||
"host",
|
||||
"TARGETS",
|
||||
"InvalidCompilerVersion",
|
||||
"Microarchitecture",
|
||||
"UnsupportedMicroarchitecture",
|
||||
"TARGETS",
|
||||
"generic_microarchitecture",
|
||||
"host",
|
||||
"version_components",
|
||||
]
|
||||
|
||||
42
lib/spack/external/archspec/cpu/detect.py
vendored
42
lib/spack/external/archspec/cpu/detect.py
vendored
@@ -155,6 +155,31 @@ def _is_bit_set(self, register: int, bit: int) -> bool:
|
||||
mask = 1 << bit
|
||||
return register & mask > 0
|
||||
|
||||
def brand_string(self) -> Optional[str]:
|
||||
"""Returns the brand string, if available."""
|
||||
if self.highest_extension_support < 0x80000004:
|
||||
return None
|
||||
|
||||
r1 = self.cpuid.registers_for(eax=0x80000002, ecx=0)
|
||||
r2 = self.cpuid.registers_for(eax=0x80000003, ecx=0)
|
||||
r3 = self.cpuid.registers_for(eax=0x80000004, ecx=0)
|
||||
result = struct.pack(
|
||||
"IIIIIIIIIIII",
|
||||
r1.eax,
|
||||
r1.ebx,
|
||||
r1.ecx,
|
||||
r1.edx,
|
||||
r2.eax,
|
||||
r2.ebx,
|
||||
r2.ecx,
|
||||
r2.edx,
|
||||
r3.eax,
|
||||
r3.ebx,
|
||||
r3.ecx,
|
||||
r3.edx,
|
||||
).decode("utf-8")
|
||||
return result.strip("\x00")
|
||||
|
||||
|
||||
@detection(operating_system="Windows")
|
||||
def cpuid_info():
|
||||
@@ -174,8 +199,8 @@ def _check_output(args, env):
|
||||
|
||||
|
||||
WINDOWS_MAPPING = {
|
||||
"AMD64": "x86_64",
|
||||
"ARM64": "aarch64",
|
||||
"AMD64": X86_64,
|
||||
"ARM64": AARCH64,
|
||||
}
|
||||
|
||||
|
||||
@@ -409,3 +434,16 @@ def compatibility_check_for_riscv64(info, target):
|
||||
return (target == arch_root or arch_root in target.ancestors) and (
|
||||
target.name == info.name or target.vendor == "generic"
|
||||
)
|
||||
|
||||
|
||||
def brand_string() -> Optional[str]:
|
||||
"""Returns the brand string of the host, if detected, or None."""
|
||||
if platform.system() == "Darwin":
|
||||
return _check_output(
|
||||
["sysctl", "-n", "machdep.cpu.brand_string"], env=_ensure_bin_usrbin_in_path()
|
||||
).strip()
|
||||
|
||||
if host().family == X86_64:
|
||||
return CpuidInfoCollector().brand_string()
|
||||
|
||||
return None
|
||||
|
||||
@@ -208,6 +208,8 @@ def optimization_flags(self, compiler, version):
|
||||
"""Returns a string containing the optimization flags that needs
|
||||
to be used to produce code optimized for this micro-architecture.
|
||||
|
||||
The version is expected to be a string of dot separated digits.
|
||||
|
||||
If there is no information on the compiler passed as argument the
|
||||
function returns an empty string. If it is known that the compiler
|
||||
version we want to use does not support this architecture the function
|
||||
@@ -216,6 +218,11 @@ def optimization_flags(self, compiler, version):
|
||||
Args:
|
||||
compiler (str): name of the compiler to be used
|
||||
version (str): version of the compiler to be used
|
||||
|
||||
Raises:
|
||||
UnsupportedMicroarchitecture: if the requested compiler does not support
|
||||
this micro-architecture.
|
||||
ValueError: if the version doesn't match the expected format
|
||||
"""
|
||||
# If we don't have information on compiler at all return an empty string
|
||||
if compiler not in self.family.compilers:
|
||||
@@ -232,6 +239,14 @@ def optimization_flags(self, compiler, version):
|
||||
msg = msg.format(compiler, best_target, best_target.family)
|
||||
raise UnsupportedMicroarchitecture(msg)
|
||||
|
||||
# Check that the version matches the expected format
|
||||
if not re.match(r"^(?:\d+\.)*\d+$", version):
|
||||
msg = (
|
||||
"invalid format for the compiler version argument. "
|
||||
"Only dot separated digits are allowed."
|
||||
)
|
||||
raise InvalidCompilerVersion(msg)
|
||||
|
||||
# If we have information on this compiler we need to check the
|
||||
# version being used
|
||||
compiler_info = self.compilers[compiler]
|
||||
@@ -292,7 +307,7 @@ def generic_microarchitecture(name):
|
||||
Args:
|
||||
name (str): name of the micro-architecture
|
||||
"""
|
||||
return Microarchitecture(name, parents=[], vendor="generic", features=[], compilers={})
|
||||
return Microarchitecture(name, parents=[], vendor="generic", features=set(), compilers={})
|
||||
|
||||
|
||||
def version_components(version):
|
||||
@@ -367,7 +382,15 @@ def fill_target_from_dict(name, data, targets):
|
||||
TARGETS = LazyDictionary(_known_microarchitectures)
|
||||
|
||||
|
||||
class UnsupportedMicroarchitecture(ValueError):
|
||||
class ArchspecError(Exception):
|
||||
"""Base class for errors within archspec"""
|
||||
|
||||
|
||||
class UnsupportedMicroarchitecture(ArchspecError, ValueError):
|
||||
"""Raised if a compiler version does not support optimization for a given
|
||||
micro-architecture.
|
||||
"""
|
||||
|
||||
|
||||
class InvalidCompilerVersion(ArchspecError, ValueError):
|
||||
"""Raised when an invalid format is used for compiler versions in archspec."""
|
||||
|
||||
@@ -2937,8 +2937,6 @@
|
||||
"ilrcpc",
|
||||
"flagm",
|
||||
"ssbs",
|
||||
"paca",
|
||||
"pacg",
|
||||
"dcpodp",
|
||||
"svei8mm",
|
||||
"svebf16",
|
||||
@@ -3066,8 +3064,6 @@
|
||||
"flagm",
|
||||
"ssbs",
|
||||
"sb",
|
||||
"paca",
|
||||
"pacg",
|
||||
"dcpodp",
|
||||
"sve2",
|
||||
"sveaes",
|
||||
@@ -3081,8 +3077,7 @@
|
||||
"svebf16",
|
||||
"i8mm",
|
||||
"bf16",
|
||||
"dgh",
|
||||
"bti"
|
||||
"dgh"
|
||||
],
|
||||
"compilers" : {
|
||||
"gcc": [
|
||||
|
||||
13
lib/spack/external/patches/ruamelyaml.patch
vendored
Normal file
13
lib/spack/external/patches/ruamelyaml.patch
vendored
Normal file
@@ -0,0 +1,13 @@
|
||||
diff --git a/lib/spack/external/_vendoring/ruamel/yaml/comments.py b/lib/spack/external/_vendoring/ruamel/yaml/comments.py
|
||||
index 1badeda585..892c868af3 100644
|
||||
--- a/lib/spack/external/_vendoring/ruamel/yaml/comments.py
|
||||
+++ b/lib/spack/external/_vendoring/ruamel/yaml/comments.py
|
||||
@@ -497,7 +497,7 @@ def copy_attributes(self, t, memo=None):
|
||||
Tag.attrib, merge_attrib]:
|
||||
if hasattr(self, a):
|
||||
if memo is not None:
|
||||
- setattr(t, a, copy.deepcopy(getattr(self, a, memo)))
|
||||
+ setattr(t, a, copy.deepcopy(getattr(self, a), memo))
|
||||
else:
|
||||
setattr(t, a, getattr(self, a))
|
||||
# fmt: on
|
||||
@@ -98,3 +98,10 @@ def path_filter_caller(*args, **kwargs):
|
||||
if _func:
|
||||
return holder_func(_func)
|
||||
return holder_func
|
||||
|
||||
|
||||
def sanitize_win_longpath(path: str) -> str:
|
||||
"""Strip Windows extended path prefix from strings
|
||||
Returns sanitized string.
|
||||
no-op if extended path prefix is not present"""
|
||||
return path.lstrip("\\\\?\\")
|
||||
|
||||
@@ -12,7 +12,7 @@
|
||||
# Archive extensions allowed in Spack
|
||||
PREFIX_EXTENSIONS = ("tar", "TAR")
|
||||
EXTENSIONS = ("gz", "bz2", "xz", "Z")
|
||||
NO_TAR_EXTENSIONS = ("zip", "tgz", "tbz2", "tbz", "txz")
|
||||
NO_TAR_EXTENSIONS = ("zip", "tgz", "tbz2", "tbz", "txz", "whl")
|
||||
|
||||
# Add PREFIX_EXTENSIONS and EXTENSIONS last so that .tar.gz is matched *before* .tar or .gz
|
||||
ALLOWED_ARCHIVE_TYPES = (
|
||||
@@ -357,10 +357,8 @@ def strip_version_suffixes(path_or_url: str) -> str:
|
||||
r"i[36]86",
|
||||
r"ppc64(le)?",
|
||||
r"armv?(7l|6l|64)?",
|
||||
# PyPI
|
||||
r"[._-]py[23].*\.whl",
|
||||
r"[._-]cp[23].*\.whl",
|
||||
r"[._-]win.*\.exe",
|
||||
# PyPI wheels
|
||||
r"-(?:py|cp)[23].*",
|
||||
]
|
||||
|
||||
for regex in suffix_regexes:
|
||||
@@ -403,7 +401,7 @@ def expand_contracted_extension_in_path(
|
||||
def compression_ext_from_compressed_archive(extension: str) -> Optional[str]:
|
||||
"""Returns compression extension for a compressed archive"""
|
||||
extension = expand_contracted_extension(extension)
|
||||
for ext in [*EXTENSIONS]:
|
||||
for ext in EXTENSIONS:
|
||||
if ext in extension:
|
||||
return ext
|
||||
return None
|
||||
|
||||
@@ -187,26 +187,58 @@ def polite_filename(filename: str) -> str:
|
||||
return _polite_antipattern().sub("_", filename)
|
||||
|
||||
|
||||
def getuid():
|
||||
def getuid() -> Union[str, int]:
|
||||
"""Returns os getuid on non Windows
|
||||
On Windows returns 0 for admin users, login string otherwise
|
||||
This is in line with behavior from get_owner_uid which
|
||||
always returns the login string on Windows
|
||||
"""
|
||||
if sys.platform == "win32":
|
||||
import ctypes
|
||||
|
||||
# If not admin, use the string name of the login as a unique ID
|
||||
if ctypes.windll.shell32.IsUserAnAdmin() == 0:
|
||||
return 1
|
||||
return os.getlogin()
|
||||
return 0
|
||||
else:
|
||||
return os.getuid()
|
||||
|
||||
|
||||
def _win_rename(src, dst):
|
||||
# os.replace will still fail if on Windows (but not POSIX) if the dst
|
||||
# is a symlink to a directory (all other cases have parity Windows <-> Posix)
|
||||
if os.path.islink(dst) and os.path.isdir(os.path.realpath(dst)):
|
||||
if os.path.samefile(src, dst):
|
||||
# src and dst are the same
|
||||
# do nothing and exit early
|
||||
return
|
||||
# If dst exists and is a symlink to a directory
|
||||
# we need to remove dst and then perform rename/replace
|
||||
# this is safe to do as there's no chance src == dst now
|
||||
os.remove(dst)
|
||||
os.replace(src, dst)
|
||||
|
||||
|
||||
@system_path_filter
|
||||
def msdos_escape_parens(path):
|
||||
"""MS-DOS interprets parens as grouping parameters even in a quoted string"""
|
||||
if sys.platform == "win32":
|
||||
return path.replace("(", "^(").replace(")", "^)")
|
||||
else:
|
||||
return path
|
||||
|
||||
|
||||
@system_path_filter
|
||||
def rename(src, dst):
|
||||
# On Windows, os.rename will fail if the destination file already exists
|
||||
# os.replace is the same as os.rename on POSIX and is MoveFileExW w/
|
||||
# the MOVEFILE_REPLACE_EXISTING flag on Windows
|
||||
# Windows invocation is abstracted behind additonal logic handling
|
||||
# remaining cases of divergent behavior accross platforms
|
||||
if sys.platform == "win32":
|
||||
# Windows path existence checks will sometimes fail on junctions/links/symlinks
|
||||
# so check for that case
|
||||
if os.path.exists(dst) or islink(dst):
|
||||
os.remove(dst)
|
||||
os.rename(src, dst)
|
||||
_win_rename(src, dst)
|
||||
else:
|
||||
os.replace(src, dst)
|
||||
|
||||
|
||||
@system_path_filter
|
||||
@@ -536,7 +568,13 @@ def exploding_archive_handler(tarball_container, stage):
|
||||
|
||||
|
||||
@system_path_filter(arg_slice=slice(1))
|
||||
def get_owner_uid(path, err_msg=None):
|
||||
def get_owner_uid(path, err_msg=None) -> Union[str, int]:
|
||||
"""Returns owner UID of path destination
|
||||
On non Windows this is the value of st_uid
|
||||
On Windows this is the login string associated with the
|
||||
owning user.
|
||||
|
||||
"""
|
||||
if not os.path.exists(path):
|
||||
mkdirp(path, mode=stat.S_IRWXU)
|
||||
|
||||
@@ -805,7 +843,7 @@ def copy_tree(
|
||||
if islink(s):
|
||||
link_target = resolve_link_target_relative_to_the_link(s)
|
||||
if symlinks:
|
||||
target = os.readlink(s)
|
||||
target = readlink(s)
|
||||
if os.path.isabs(target):
|
||||
|
||||
def escaped_path(path):
|
||||
@@ -1217,10 +1255,12 @@ def windows_sfn(path: os.PathLike):
|
||||
import ctypes
|
||||
|
||||
k32 = ctypes.WinDLL("kernel32", use_last_error=True)
|
||||
# Method with null values returns size of short path name
|
||||
sz = k32.GetShortPathNameW(path, None, 0)
|
||||
# stub Windows types TCHAR[LENGTH]
|
||||
TCHAR_arr = ctypes.c_wchar * len(path)
|
||||
TCHAR_arr = ctypes.c_wchar * sz
|
||||
ret_str = TCHAR_arr()
|
||||
k32.GetShortPathNameW(path, ret_str, len(path))
|
||||
k32.GetShortPathNameW(path, ctypes.byref(ret_str), sz)
|
||||
return ret_str.value
|
||||
|
||||
|
||||
@@ -2410,9 +2450,10 @@ def add_library_dependent(self, *dest):
|
||||
"""
|
||||
for pth in dest:
|
||||
if os.path.isfile(pth):
|
||||
self._additional_library_dependents.add(pathlib.Path(pth).parent)
|
||||
new_pth = pathlib.Path(pth).parent
|
||||
else:
|
||||
self._additional_library_dependents.add(pathlib.Path(pth))
|
||||
new_pth = pathlib.Path(pth)
|
||||
self._additional_library_dependents.add(new_pth)
|
||||
|
||||
@property
|
||||
def rpaths(self):
|
||||
@@ -2490,8 +2531,14 @@ def establish_link(self):
|
||||
|
||||
# for each binary install dir in self.pkg (i.e. pkg.prefix.bin, pkg.prefix.lib)
|
||||
# install a symlink to each dependent library
|
||||
for library, lib_dir in itertools.product(self.rpaths, self.library_dependents):
|
||||
self._link(library, lib_dir)
|
||||
|
||||
# do not rpath for system libraries included in the dag
|
||||
# we should not be modifying libraries managed by the Windows system
|
||||
# as this will negatively impact linker behavior and can result in permission
|
||||
# errors if those system libs are not modifiable by Spack
|
||||
if "windows-system" not in getattr(self.pkg, "tags", []):
|
||||
for library, lib_dir in itertools.product(self.rpaths, self.library_dependents):
|
||||
self._link(library, lib_dir)
|
||||
|
||||
|
||||
@system_path_filter
|
||||
|
||||
@@ -11,7 +11,7 @@
|
||||
|
||||
from llnl.util import lang, tty
|
||||
|
||||
from ..path import system_path_filter
|
||||
from ..path import sanitize_win_longpath, system_path_filter
|
||||
|
||||
if sys.platform == "win32":
|
||||
from win32file import CreateHardLink
|
||||
@@ -247,9 +247,9 @@ def _windows_create_junction(source: str, link: str):
|
||||
out, err = proc.communicate()
|
||||
tty.debug(out.decode())
|
||||
if proc.returncode != 0:
|
||||
err = err.decode()
|
||||
tty.error(err)
|
||||
raise SymlinkError("Make junction command returned a non-zero return code.", err)
|
||||
err_str = err.decode()
|
||||
tty.error(err_str)
|
||||
raise SymlinkError("Make junction command returned a non-zero return code.", err_str)
|
||||
|
||||
|
||||
def _windows_create_hard_link(path: str, link: str):
|
||||
@@ -269,14 +269,14 @@ def _windows_create_hard_link(path: str, link: str):
|
||||
CreateHardLink(link, path)
|
||||
|
||||
|
||||
def readlink(path: str):
|
||||
def readlink(path: str, *, dir_fd=None):
|
||||
"""Spack utility to override of os.readlink method to work cross platform"""
|
||||
if _windows_is_hardlink(path):
|
||||
return _windows_read_hard_link(path)
|
||||
elif _windows_is_junction(path):
|
||||
return _windows_read_junction(path)
|
||||
else:
|
||||
return os.readlink(path)
|
||||
return sanitize_win_longpath(os.readlink(path, dir_fd=dir_fd))
|
||||
|
||||
|
||||
def _windows_read_hard_link(link: str) -> str:
|
||||
|
||||
@@ -12,7 +12,7 @@
|
||||
import traceback
|
||||
from datetime import datetime
|
||||
from sys import platform as _platform
|
||||
from typing import NoReturn
|
||||
from typing import Any, NoReturn
|
||||
|
||||
if _platform != "win32":
|
||||
import fcntl
|
||||
@@ -158,21 +158,22 @@ def get_timestamp(force=False):
|
||||
return ""
|
||||
|
||||
|
||||
def msg(message, *args, **kwargs):
|
||||
def msg(message: Any, *args: Any, newline: bool = True) -> None:
|
||||
if not msg_enabled():
|
||||
return
|
||||
|
||||
if isinstance(message, Exception):
|
||||
message = "%s: %s" % (message.__class__.__name__, str(message))
|
||||
message = f"{message.__class__.__name__}: {message}"
|
||||
else:
|
||||
message = str(message)
|
||||
|
||||
newline = kwargs.get("newline", True)
|
||||
st_text = ""
|
||||
if _stacktrace:
|
||||
st_text = process_stacktrace(2)
|
||||
if newline:
|
||||
cprint("@*b{%s==>} %s%s" % (st_text, get_timestamp(), cescape(_output_filter(message))))
|
||||
else:
|
||||
cwrite("@*b{%s==>} %s%s" % (st_text, get_timestamp(), cescape(_output_filter(message))))
|
||||
|
||||
nl = "\n" if newline else ""
|
||||
cwrite(f"@*b{{{st_text}==>}} {get_timestamp()}{cescape(_output_filter(message))}{nl}")
|
||||
|
||||
for arg in args:
|
||||
print(indent + _output_filter(str(arg)))
|
||||
|
||||
|
||||
@@ -237,7 +237,6 @@ def transpose():
|
||||
def colified(
|
||||
elts: List[Any],
|
||||
cols: int = 0,
|
||||
output: Optional[IO] = None,
|
||||
indent: int = 0,
|
||||
padding: int = 2,
|
||||
tty: Optional[bool] = None,
|
||||
|
||||
@@ -59,9 +59,11 @@
|
||||
|
||||
To output an @, use '@@'. To output a } inside braces, use '}}'.
|
||||
"""
|
||||
import os
|
||||
import re
|
||||
import sys
|
||||
from contextlib import contextmanager
|
||||
from typing import Optional
|
||||
|
||||
|
||||
class ColorParseError(Exception):
|
||||
@@ -95,14 +97,34 @@ def __init__(self, message):
|
||||
} # white
|
||||
|
||||
# Regex to be used for color formatting
|
||||
color_re = r"@(?:@|\.|([*_])?([a-zA-Z])?(?:{((?:[^}]|}})*)})?)"
|
||||
COLOR_RE = re.compile(r"@(?:(@)|(\.)|([*_])?([a-zA-Z])?(?:{((?:[^}]|}})*)})?)")
|
||||
|
||||
# Mapping from color arguments to values for tty.set_color
|
||||
color_when_values = {"always": True, "auto": None, "never": False}
|
||||
|
||||
# Force color; None: Only color if stdout is a tty
|
||||
# True: Always colorize output, False: Never colorize output
|
||||
_force_color = None
|
||||
|
||||
def _color_when_value(when):
|
||||
"""Raise a ValueError for an invalid color setting.
|
||||
|
||||
Valid values are 'always', 'never', and 'auto', or equivalently,
|
||||
True, False, and None.
|
||||
"""
|
||||
if when in color_when_values:
|
||||
return color_when_values[when]
|
||||
elif when not in color_when_values.values():
|
||||
raise ValueError("Invalid color setting: %s" % when)
|
||||
return when
|
||||
|
||||
|
||||
def _color_from_environ() -> Optional[bool]:
|
||||
try:
|
||||
return _color_when_value(os.environ.get("SPACK_COLOR", "auto"))
|
||||
except ValueError:
|
||||
return None
|
||||
|
||||
|
||||
#: When `None` colorize when stdout is tty, when `True` or `False` always or never colorize resp.
|
||||
_force_color = _color_from_environ()
|
||||
|
||||
|
||||
def try_enable_terminal_color_on_windows():
|
||||
@@ -163,19 +185,6 @@ def _err_check(result, func, args):
|
||||
debug("Unable to support color on Windows terminal")
|
||||
|
||||
|
||||
def _color_when_value(when):
|
||||
"""Raise a ValueError for an invalid color setting.
|
||||
|
||||
Valid values are 'always', 'never', and 'auto', or equivalently,
|
||||
True, False, and None.
|
||||
"""
|
||||
if when in color_when_values:
|
||||
return color_when_values[when]
|
||||
elif when not in color_when_values.values():
|
||||
raise ValueError("Invalid color setting: %s" % when)
|
||||
return when
|
||||
|
||||
|
||||
def get_color_when():
|
||||
"""Return whether commands should print color or not."""
|
||||
if _force_color is not None:
|
||||
@@ -203,77 +212,64 @@ def color_when(value):
|
||||
set_color_when(old_value)
|
||||
|
||||
|
||||
class match_to_ansi:
|
||||
def __init__(self, color=True, enclose=False, zsh=False):
|
||||
self.color = _color_when_value(color)
|
||||
self.enclose = enclose
|
||||
self.zsh = zsh
|
||||
|
||||
def escape(self, s):
|
||||
"""Returns a TTY escape sequence for a color"""
|
||||
if self.color:
|
||||
if self.zsh:
|
||||
result = rf"\e[0;{s}m"
|
||||
else:
|
||||
result = f"\033[{s}m"
|
||||
|
||||
if self.enclose:
|
||||
result = rf"\[{result}\]"
|
||||
|
||||
return result
|
||||
def _escape(s: str, color: bool, enclose: bool, zsh: bool) -> str:
|
||||
"""Returns a TTY escape sequence for a color"""
|
||||
if color:
|
||||
if zsh:
|
||||
result = rf"\e[0;{s}m"
|
||||
else:
|
||||
return ""
|
||||
result = f"\033[{s}m"
|
||||
|
||||
def __call__(self, match):
|
||||
"""Convert a match object generated by ``color_re`` into an ansi
|
||||
color code. This can be used as a handler in ``re.sub``.
|
||||
"""
|
||||
style, color, text = match.groups()
|
||||
m = match.group(0)
|
||||
if enclose:
|
||||
result = rf"\[{result}\]"
|
||||
|
||||
if m == "@@":
|
||||
return "@"
|
||||
elif m == "@.":
|
||||
return self.escape(0)
|
||||
elif m == "@":
|
||||
raise ColorParseError("Incomplete color format: '%s' in %s" % (m, match.string))
|
||||
|
||||
string = styles[style]
|
||||
if color:
|
||||
if color not in colors:
|
||||
raise ColorParseError(
|
||||
"Invalid color specifier: '%s' in '%s'" % (color, match.string)
|
||||
)
|
||||
string += ";" + str(colors[color])
|
||||
|
||||
colored_text = ""
|
||||
if text:
|
||||
colored_text = text + self.escape(0)
|
||||
|
||||
return self.escape(string) + colored_text
|
||||
return result
|
||||
else:
|
||||
return ""
|
||||
|
||||
|
||||
def colorize(string, **kwargs):
|
||||
def colorize(
|
||||
string: str, color: Optional[bool] = None, enclose: bool = False, zsh: bool = False
|
||||
) -> str:
|
||||
"""Replace all color expressions in a string with ANSI control codes.
|
||||
|
||||
Args:
|
||||
string (str): The string to replace
|
||||
string: The string to replace
|
||||
|
||||
Returns:
|
||||
str: The filtered string
|
||||
The filtered string
|
||||
|
||||
Keyword Arguments:
|
||||
color (bool): If False, output will be plain text without control
|
||||
codes, for output to non-console devices.
|
||||
enclose (bool): If True, enclose ansi color sequences with
|
||||
color: If False, output will be plain text without control codes, for output to
|
||||
non-console devices (default: automatically choose color or not)
|
||||
enclose: If True, enclose ansi color sequences with
|
||||
square brackets to prevent misestimation of terminal width.
|
||||
zsh (bool): If True, use zsh ansi codes instead of bash ones (for variables like PS1)
|
||||
zsh: If True, use zsh ansi codes instead of bash ones (for variables like PS1)
|
||||
"""
|
||||
color = _color_when_value(kwargs.get("color", get_color_when()))
|
||||
zsh = kwargs.get("zsh", False)
|
||||
string = re.sub(color_re, match_to_ansi(color, kwargs.get("enclose")), string, zsh)
|
||||
string = string.replace("}}", "}")
|
||||
return string
|
||||
color = color if color is not None else get_color_when()
|
||||
|
||||
def match_to_ansi(match):
|
||||
"""Convert a match object generated by ``COLOR_RE`` into an ansi
|
||||
color code. This can be used as a handler in ``re.sub``.
|
||||
"""
|
||||
escaped_at, dot, style, color_code, text = match.groups()
|
||||
|
||||
if escaped_at:
|
||||
return "@"
|
||||
elif dot:
|
||||
return _escape(0, color, enclose, zsh)
|
||||
elif not (style or color_code):
|
||||
raise ColorParseError(
|
||||
f"Incomplete color format: '{match.group(0)}' in '{match.string}'"
|
||||
)
|
||||
|
||||
ansi_code = _escape(f"{styles[style]};{colors.get(color_code, '')}", color, enclose, zsh)
|
||||
if text:
|
||||
return f"{ansi_code}{text}{_escape(0, color, enclose, zsh)}"
|
||||
else:
|
||||
return ansi_code
|
||||
|
||||
return COLOR_RE.sub(match_to_ansi, string).replace("}}", "}")
|
||||
|
||||
|
||||
def clen(string):
|
||||
@@ -305,7 +301,7 @@ def cprint(string, stream=None, color=None):
|
||||
cwrite(string + "\n", stream, color)
|
||||
|
||||
|
||||
def cescape(string):
|
||||
def cescape(string: str) -> str:
|
||||
"""Escapes special characters needed for color codes.
|
||||
|
||||
Replaces the following symbols with their equivalent literal forms:
|
||||
@@ -321,10 +317,7 @@ def cescape(string):
|
||||
Returns:
|
||||
(str): the string with color codes escaped
|
||||
"""
|
||||
string = str(string)
|
||||
string = string.replace("@", "@@")
|
||||
string = string.replace("}", "}}")
|
||||
return string
|
||||
return string.replace("@", "@@").replace("}", "}}")
|
||||
|
||||
|
||||
class ColorStream:
|
||||
|
||||
@@ -4,7 +4,7 @@
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
#: PEP440 canonical <major>.<minor>.<micro>.<devN> string
|
||||
__version__ = "0.22.0.dev0"
|
||||
__version__ = "0.23.0.dev0"
|
||||
spack_version = __version__
|
||||
|
||||
|
||||
|
||||
@@ -254,8 +254,8 @@ def _search_duplicate_specs_in_externals(error_cls):
|
||||
|
||||
@config_packages
|
||||
def _deprecated_preferences(error_cls):
|
||||
"""Search package preferences deprecated in v0.21 (and slated for removal in v0.22)"""
|
||||
# TODO (v0.22): remove this audit as the attributes will not be allowed in config
|
||||
"""Search package preferences deprecated in v0.21 (and slated for removal in v0.23)"""
|
||||
# TODO (v0.23): remove this audit as the attributes will not be allowed in config
|
||||
errors = []
|
||||
packages_yaml = spack.config.CONFIG.get_config("packages")
|
||||
|
||||
@@ -421,6 +421,10 @@ def _check_patch_urls(pkgs, error_cls):
|
||||
r"^https?://(?:patch-diff\.)?github(?:usercontent)?\.com/"
|
||||
r".+/.+/(?:commit|pull)/[a-fA-F0-9]+\.(?:patch|diff)"
|
||||
)
|
||||
github_pull_commits_re = (
|
||||
r"^https?://(?:patch-diff\.)?github(?:usercontent)?\.com/"
|
||||
r".+/.+/pull/\d+/commits/[a-fA-F0-9]+\.(?:patch|diff)"
|
||||
)
|
||||
# Only .diff URLs have stable/full hashes:
|
||||
# https://forum.gitlab.com/t/patches-with-full-index/29313
|
||||
gitlab_patch_url_re = (
|
||||
@@ -436,14 +440,24 @@ def _check_patch_urls(pkgs, error_cls):
|
||||
if not isinstance(patch, spack.patch.UrlPatch):
|
||||
continue
|
||||
|
||||
if re.match(github_patch_url_re, patch.url):
|
||||
if re.match(github_pull_commits_re, patch.url):
|
||||
url = re.sub(r"/pull/\d+/commits/", r"/commit/", patch.url)
|
||||
url = re.sub(r"^(.*)(?<!full_index=1)$", r"\1?full_index=1", url)
|
||||
errors.append(
|
||||
error_cls(
|
||||
f"patch URL in package {pkg_cls.name} "
|
||||
+ "must not be a pull request commit; "
|
||||
+ f"instead use {url}",
|
||||
[patch.url],
|
||||
)
|
||||
)
|
||||
elif re.match(github_patch_url_re, patch.url):
|
||||
full_index_arg = "?full_index=1"
|
||||
if not patch.url.endswith(full_index_arg):
|
||||
errors.append(
|
||||
error_cls(
|
||||
"patch URL in package {0} must end with {1}".format(
|
||||
pkg_cls.name, full_index_arg
|
||||
),
|
||||
f"patch URL in package {pkg_cls.name} "
|
||||
+ f"must end with {full_index_arg}",
|
||||
[patch.url],
|
||||
)
|
||||
)
|
||||
@@ -451,9 +465,7 @@ def _check_patch_urls(pkgs, error_cls):
|
||||
if not patch.url.endswith(".diff"):
|
||||
errors.append(
|
||||
error_cls(
|
||||
"patch URL in package {0} must end with .diff".format(
|
||||
pkg_cls.name
|
||||
),
|
||||
f"patch URL in package {pkg_cls.name} must end with .diff",
|
||||
[patch.url],
|
||||
)
|
||||
)
|
||||
@@ -1046,7 +1058,7 @@ def _extracts_errors(triggers, summary):
|
||||
group="externals",
|
||||
tag="PKG-EXTERNALS",
|
||||
description="Sanity checks for external software detection",
|
||||
kwargs=("pkgs",),
|
||||
kwargs=("pkgs", "debug_log"),
|
||||
)
|
||||
|
||||
|
||||
@@ -1069,7 +1081,7 @@ def packages_with_detection_tests():
|
||||
|
||||
|
||||
@external_detection
|
||||
def _test_detection_by_executable(pkgs, error_cls):
|
||||
def _test_detection_by_executable(pkgs, debug_log, error_cls):
|
||||
"""Test drive external detection for packages"""
|
||||
import spack.detection
|
||||
|
||||
@@ -1095,6 +1107,7 @@ def _test_detection_by_executable(pkgs, error_cls):
|
||||
for idx, test_runner in enumerate(
|
||||
spack.detection.detection_tests(pkg_name, spack.repo.PATH)
|
||||
):
|
||||
debug_log(f"[{__file__}]: running test {idx} for package {pkg_name}")
|
||||
specs = test_runner.execute()
|
||||
expected_specs = test_runner.expected_specs
|
||||
|
||||
@@ -1111,4 +1124,75 @@ def _test_detection_by_executable(pkgs, error_cls):
|
||||
details = [msg.format(s, idx) for s in sorted(not_expected)]
|
||||
errors.append(error_cls(summary=summary, details=details))
|
||||
|
||||
matched_detection = []
|
||||
for candidate in expected_specs:
|
||||
try:
|
||||
idx = specs.index(candidate)
|
||||
matched_detection.append((candidate, specs[idx]))
|
||||
except (AttributeError, ValueError):
|
||||
pass
|
||||
|
||||
def _compare_extra_attribute(_expected, _detected, *, _spec):
|
||||
result = []
|
||||
# Check items are of the same type
|
||||
if not isinstance(_detected, type(_expected)):
|
||||
_summary = f'{pkg_name}: error when trying to detect "{_expected}"'
|
||||
_details = [f"{_detected} was detected instead"]
|
||||
return [error_cls(summary=_summary, details=_details)]
|
||||
|
||||
# If they are string expected is a regex
|
||||
if isinstance(_expected, str):
|
||||
try:
|
||||
_regex = re.compile(_expected)
|
||||
except re.error:
|
||||
_summary = f'{pkg_name}: illegal regex in "{_spec}" extra attributes'
|
||||
_details = [f"{_expected} is not a valid regex"]
|
||||
return [error_cls(summary=_summary, details=_details)]
|
||||
|
||||
if not _regex.match(_detected):
|
||||
_summary = (
|
||||
f'{pkg_name}: error when trying to match "{_expected}" '
|
||||
f"in extra attributes"
|
||||
)
|
||||
_details = [f"{_detected} does not match the regex"]
|
||||
return [error_cls(summary=_summary, details=_details)]
|
||||
|
||||
if isinstance(_expected, dict):
|
||||
_not_detected = set(_expected.keys()) - set(_detected.keys())
|
||||
if _not_detected:
|
||||
_summary = f"{pkg_name}: cannot detect some attributes for spec {_spec}"
|
||||
_details = [
|
||||
f'"{_expected}" was expected',
|
||||
f'"{_detected}" was detected',
|
||||
] + [f'attribute "{s}" was not detected' for s in sorted(_not_detected)]
|
||||
result.append(error_cls(summary=_summary, details=_details))
|
||||
|
||||
_common = set(_expected.keys()) & set(_detected.keys())
|
||||
for _key in _common:
|
||||
result.extend(
|
||||
_compare_extra_attribute(_expected[_key], _detected[_key], _spec=_spec)
|
||||
)
|
||||
|
||||
return result
|
||||
|
||||
for expected, detected in matched_detection:
|
||||
# We might not want to test all attributes, so avoid not_expected
|
||||
not_detected = set(expected.extra_attributes) - set(detected.extra_attributes)
|
||||
if not_detected:
|
||||
summary = f"{pkg_name}: cannot detect some attributes for spec {expected}"
|
||||
details = [
|
||||
f'"{s}" was not detected [test_id={idx}]' for s in sorted(not_detected)
|
||||
]
|
||||
errors.append(error_cls(summary=summary, details=details))
|
||||
|
||||
common = set(expected.extra_attributes) & set(detected.extra_attributes)
|
||||
for key in common:
|
||||
errors.extend(
|
||||
_compare_extra_attribute(
|
||||
expected.extra_attributes[key],
|
||||
detected.extra_attributes[key],
|
||||
_spec=expected,
|
||||
)
|
||||
)
|
||||
|
||||
return errors
|
||||
|
||||
@@ -17,7 +17,6 @@
|
||||
import tarfile
|
||||
import tempfile
|
||||
import time
|
||||
import traceback
|
||||
import urllib.error
|
||||
import urllib.parse
|
||||
import urllib.request
|
||||
@@ -30,6 +29,7 @@
|
||||
import llnl.util.lang
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.filesystem import BaseDirectoryVisitor, mkdirp, visit_directory_tree
|
||||
from llnl.util.symlink import readlink
|
||||
|
||||
import spack.caches
|
||||
import spack.cmd
|
||||
@@ -111,10 +111,6 @@ def __init__(self, errors):
|
||||
super().__init__(self.message)
|
||||
|
||||
|
||||
class ListMirrorSpecsError(spack.error.SpackError):
|
||||
"""Raised when unable to retrieve list of specs from the mirror"""
|
||||
|
||||
|
||||
class BinaryCacheIndex:
|
||||
"""
|
||||
The BinaryCacheIndex tracks what specs are available on (usually remote)
|
||||
@@ -541,83 +537,6 @@ def binary_index_location():
|
||||
BINARY_INDEX: BinaryCacheIndex = llnl.util.lang.Singleton(BinaryCacheIndex) # type: ignore
|
||||
|
||||
|
||||
class NoOverwriteException(spack.error.SpackError):
|
||||
"""Raised when a file would be overwritten"""
|
||||
|
||||
def __init__(self, file_path):
|
||||
super().__init__(f"Refusing to overwrite the following file: {file_path}")
|
||||
|
||||
|
||||
class NoGpgException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when gpg2 is not in PATH
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class NoKeyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when gpg has no default key added.
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class PickKeyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when multiple keys can be used to sign.
|
||||
"""
|
||||
|
||||
def __init__(self, keys):
|
||||
err_msg = "Multiple keys available for signing\n%s\n" % keys
|
||||
err_msg += "Use spack buildcache create -k <key hash> to pick a key."
|
||||
super().__init__(err_msg)
|
||||
|
||||
|
||||
class NoVerifyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if file fails signature verification.
|
||||
"""
|
||||
|
||||
pass
|
||||
|
||||
|
||||
class NoChecksumException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if file fails checksum verification.
|
||||
"""
|
||||
|
||||
def __init__(self, path, size, contents, algorithm, expected, computed):
|
||||
super().__init__(
|
||||
f"{algorithm} checksum failed for {path}",
|
||||
f"Expected {expected} but got {computed}. "
|
||||
f"File size = {size} bytes. Contents = {contents!r}",
|
||||
)
|
||||
|
||||
|
||||
class NewLayoutException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if directory layout is different from buildcache.
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class InvalidMetadataFile(spack.error.SpackError):
|
||||
pass
|
||||
|
||||
|
||||
class UnsignedPackageException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if installation of unsigned package is attempted without
|
||||
the use of ``--no-check-signature``.
|
||||
"""
|
||||
|
||||
|
||||
def compute_hash(data):
|
||||
if isinstance(data, str):
|
||||
data = data.encode("utf-8")
|
||||
@@ -740,7 +659,7 @@ def get_buildfile_manifest(spec):
|
||||
# 2. paths are used as strings.
|
||||
for rel_path in visitor.symlinks:
|
||||
abs_path = os.path.join(root, rel_path)
|
||||
link = os.readlink(abs_path)
|
||||
link = readlink(abs_path)
|
||||
if os.path.isabs(link) and link.startswith(spack.store.STORE.layout.root):
|
||||
data["link_to_relocate"].append(rel_path)
|
||||
|
||||
@@ -992,15 +911,10 @@ def url_read_method(url):
|
||||
if entry.endswith("spec.json") or entry.endswith("spec.json.sig")
|
||||
]
|
||||
read_fn = url_read_method
|
||||
except KeyError as inst:
|
||||
msg = "No packages at {0}: {1}".format(cache_prefix, inst)
|
||||
tty.warn(msg)
|
||||
except Exception as err:
|
||||
# If we got some kind of S3 (access denied or other connection
|
||||
# error), the first non boto-specific class in the exception
|
||||
# hierarchy is Exception. Just print a warning and return
|
||||
msg = "Encountered problem listing packages at {0}: {1}".format(cache_prefix, err)
|
||||
tty.warn(msg)
|
||||
# If we got some kind of S3 (access denied or other connection error), the first non
|
||||
# boto-specific class in the exception is Exception. Just print a warning and return
|
||||
tty.warn(f"Encountered problem listing packages at {cache_prefix}: {err}")
|
||||
|
||||
return file_list, read_fn
|
||||
|
||||
@@ -1047,11 +961,10 @@ def generate_package_index(cache_prefix, concurrency=32):
|
||||
"""
|
||||
try:
|
||||
file_list, read_fn = _spec_files_from_cache(cache_prefix)
|
||||
except ListMirrorSpecsError as err:
|
||||
tty.error("Unable to generate package index, {0}".format(err))
|
||||
return
|
||||
except ListMirrorSpecsError as e:
|
||||
raise GenerateIndexError(f"Unable to generate package index: {e}") from e
|
||||
|
||||
tty.debug("Retrieving spec descriptor files from {0} to build index".format(cache_prefix))
|
||||
tty.debug(f"Retrieving spec descriptor files from {cache_prefix} to build index")
|
||||
|
||||
tmpdir = tempfile.mkdtemp()
|
||||
|
||||
@@ -1061,27 +974,22 @@ def generate_package_index(cache_prefix, concurrency=32):
|
||||
|
||||
try:
|
||||
_read_specs_and_push_index(file_list, read_fn, cache_prefix, db, db_root_dir, concurrency)
|
||||
except Exception as err:
|
||||
msg = "Encountered problem pushing package index to {0}: {1}".format(cache_prefix, err)
|
||||
tty.warn(msg)
|
||||
tty.debug("\n" + traceback.format_exc())
|
||||
except Exception as e:
|
||||
raise GenerateIndexError(
|
||||
f"Encountered problem pushing package index to {cache_prefix}: {e}"
|
||||
) from e
|
||||
finally:
|
||||
shutil.rmtree(tmpdir)
|
||||
shutil.rmtree(tmpdir, ignore_errors=True)
|
||||
|
||||
|
||||
def generate_key_index(key_prefix, tmpdir=None):
|
||||
"""Create the key index page.
|
||||
|
||||
Creates (or replaces) the "index.json" page at the location given in
|
||||
key_prefix. This page contains an entry for each key (.pub) under
|
||||
key_prefix.
|
||||
Creates (or replaces) the "index.json" page at the location given in key_prefix. This page
|
||||
contains an entry for each key (.pub) under key_prefix.
|
||||
"""
|
||||
|
||||
tty.debug(
|
||||
" ".join(
|
||||
("Retrieving key.pub files from", url_util.format(key_prefix), "to build key index")
|
||||
)
|
||||
)
|
||||
tty.debug(f"Retrieving key.pub files from {url_util.format(key_prefix)} to build key index")
|
||||
|
||||
try:
|
||||
fingerprints = (
|
||||
@@ -1089,17 +997,8 @@ def generate_key_index(key_prefix, tmpdir=None):
|
||||
for entry in web_util.list_url(key_prefix, recursive=False)
|
||||
if entry.endswith(".pub")
|
||||
)
|
||||
except KeyError as inst:
|
||||
msg = "No keys at {0}: {1}".format(key_prefix, inst)
|
||||
tty.warn(msg)
|
||||
return
|
||||
except Exception as err:
|
||||
# If we got some kind of S3 (access denied or other connection
|
||||
# error), the first non boto-specific class in the exception
|
||||
# hierarchy is Exception. Just print a warning and return
|
||||
msg = "Encountered problem listing keys at {0}: {1}".format(key_prefix, err)
|
||||
tty.warn(msg)
|
||||
return
|
||||
except Exception as e:
|
||||
raise CannotListKeys(f"Encountered problem listing keys at {key_prefix}: {e}") from e
|
||||
|
||||
remove_tmpdir = False
|
||||
|
||||
@@ -1124,12 +1023,13 @@ def generate_key_index(key_prefix, tmpdir=None):
|
||||
keep_original=False,
|
||||
extra_args={"ContentType": "application/json"},
|
||||
)
|
||||
except Exception as err:
|
||||
msg = "Encountered problem pushing key index to {0}: {1}".format(key_prefix, err)
|
||||
tty.warn(msg)
|
||||
except Exception as e:
|
||||
raise GenerateIndexError(
|
||||
f"Encountered problem pushing key index to {key_prefix}: {e}"
|
||||
) from e
|
||||
finally:
|
||||
if remove_tmpdir:
|
||||
shutil.rmtree(tmpdir)
|
||||
shutil.rmtree(tmpdir, ignore_errors=True)
|
||||
|
||||
|
||||
def tarfile_of_spec_prefix(tar: tarfile.TarFile, prefix: str) -> None:
|
||||
@@ -1200,7 +1100,8 @@ def push_or_raise(spec: Spec, out_url: str, options: PushOptions):
|
||||
used at the mirror (following <tarball_directory_name>).
|
||||
|
||||
This method raises :py:class:`NoOverwriteException` when ``force=False`` and the tarball or
|
||||
spec.json file already exist in the buildcache.
|
||||
spec.json file already exist in the buildcache. It raises :py:class:`PushToBuildCacheError`
|
||||
when the tarball or spec.json file cannot be pushed to the buildcache.
|
||||
"""
|
||||
if not spec.concrete:
|
||||
raise ValueError("spec must be concrete to build tarball")
|
||||
@@ -1278,13 +1179,18 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
|
||||
key = select_signing_key(options.key)
|
||||
sign_specfile(key, options.force, specfile_path)
|
||||
|
||||
# push tarball and signed spec json to remote mirror
|
||||
web_util.push_to_url(spackfile_path, remote_spackfile_path, keep_original=False)
|
||||
web_util.push_to_url(
|
||||
signed_specfile_path if not options.unsigned else specfile_path,
|
||||
remote_signed_specfile_path if not options.unsigned else remote_specfile_path,
|
||||
keep_original=False,
|
||||
)
|
||||
try:
|
||||
# push tarball and signed spec json to remote mirror
|
||||
web_util.push_to_url(spackfile_path, remote_spackfile_path, keep_original=False)
|
||||
web_util.push_to_url(
|
||||
signed_specfile_path if not options.unsigned else specfile_path,
|
||||
remote_signed_specfile_path if not options.unsigned else remote_specfile_path,
|
||||
keep_original=False,
|
||||
)
|
||||
except Exception as e:
|
||||
raise PushToBuildCacheError(
|
||||
f"Encountered problem pushing binary {remote_spackfile_path}: {e}"
|
||||
) from e
|
||||
|
||||
# push the key to the build cache's _pgp directory so it can be
|
||||
# imported
|
||||
@@ -1296,8 +1202,6 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
|
||||
if options.regenerate_index:
|
||||
generate_package_index(url_util.join(out_url, os.path.relpath(cache_prefix, stage_dir)))
|
||||
|
||||
return None
|
||||
|
||||
|
||||
class NotInstalledError(spack.error.SpackError):
|
||||
"""Raised when a spec is not installed but picked to be packaged."""
|
||||
@@ -1352,28 +1256,6 @@ def specs_to_be_packaged(
|
||||
return [s for s in itertools.chain(roots, deps) if not s.external]
|
||||
|
||||
|
||||
def push(spec: Spec, mirror_url: str, options: PushOptions):
|
||||
"""Create and push binary package for a single spec to the specified
|
||||
mirror url.
|
||||
|
||||
Args:
|
||||
spec: Spec to package and push
|
||||
mirror_url: Desired destination url for binary package
|
||||
options:
|
||||
|
||||
Returns:
|
||||
True if package was pushed, False otherwise.
|
||||
|
||||
"""
|
||||
try:
|
||||
push_or_raise(spec, mirror_url, options)
|
||||
except NoOverwriteException as e:
|
||||
warnings.warn(str(e))
|
||||
return False
|
||||
|
||||
return True
|
||||
|
||||
|
||||
def try_verify(specfile_path):
|
||||
"""Utility function to attempt to verify a local file. Assumes the
|
||||
file is a clearsigned signature file.
|
||||
@@ -2120,6 +2002,7 @@ def install_root_node(spec, unsigned=False, force=False, sha256=None):
|
||||
with spack.util.path.filter_padding():
|
||||
tty.msg('Installing "{0}" from a buildcache'.format(spec.format()))
|
||||
extract_tarball(spec, download_result, force)
|
||||
spec.package.windows_establish_runtime_linkage()
|
||||
spack.hooks.post_install(spec, False)
|
||||
spack.store.STORE.db.add(spec, spack.store.STORE.layout)
|
||||
|
||||
@@ -2706,3 +2589,96 @@ def conditional_fetch(self) -> FetchIndexResult:
|
||||
raise FetchIndexError(f"Remote index {url_manifest} is invalid")
|
||||
|
||||
return FetchIndexResult(etag=None, hash=index_digest.digest, data=result, fresh=False)
|
||||
|
||||
|
||||
class NoOverwriteException(spack.error.SpackError):
|
||||
"""Raised when a file would be overwritten"""
|
||||
|
||||
def __init__(self, file_path):
|
||||
super().__init__(f"Refusing to overwrite the following file: {file_path}")
|
||||
|
||||
|
||||
class NoGpgException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when gpg2 is not in PATH
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class NoKeyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when gpg has no default key added.
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class PickKeyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised when multiple keys can be used to sign.
|
||||
"""
|
||||
|
||||
def __init__(self, keys):
|
||||
err_msg = "Multiple keys available for signing\n%s\n" % keys
|
||||
err_msg += "Use spack buildcache create -k <key hash> to pick a key."
|
||||
super().__init__(err_msg)
|
||||
|
||||
|
||||
class NoVerifyException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if file fails signature verification.
|
||||
"""
|
||||
|
||||
pass
|
||||
|
||||
|
||||
class NoChecksumException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if file fails checksum verification.
|
||||
"""
|
||||
|
||||
def __init__(self, path, size, contents, algorithm, expected, computed):
|
||||
super().__init__(
|
||||
f"{algorithm} checksum failed for {path}",
|
||||
f"Expected {expected} but got {computed}. "
|
||||
f"File size = {size} bytes. Contents = {contents!r}",
|
||||
)
|
||||
|
||||
|
||||
class NewLayoutException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if directory layout is different from buildcache.
|
||||
"""
|
||||
|
||||
def __init__(self, msg):
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class InvalidMetadataFile(spack.error.SpackError):
|
||||
pass
|
||||
|
||||
|
||||
class UnsignedPackageException(spack.error.SpackError):
|
||||
"""
|
||||
Raised if installation of unsigned package is attempted without
|
||||
the use of ``--no-check-signature``.
|
||||
"""
|
||||
|
||||
|
||||
class ListMirrorSpecsError(spack.error.SpackError):
|
||||
"""Raised when unable to retrieve list of specs from the mirror"""
|
||||
|
||||
|
||||
class GenerateIndexError(spack.error.SpackError):
|
||||
"""Raised when unable to generate key or package index for mirror"""
|
||||
|
||||
|
||||
class CannotListKeys(GenerateIndexError):
|
||||
"""Raised when unable to list keys when generating key index"""
|
||||
|
||||
|
||||
class PushToBuildCacheError(spack.error.SpackError):
|
||||
"""Raised when unable to push objects to binary mirror"""
|
||||
|
||||
@@ -5,7 +5,13 @@
|
||||
"""Function and classes needed to bootstrap Spack itself."""
|
||||
|
||||
from .config import ensure_bootstrap_configuration, is_bootstrapping, store_path
|
||||
from .core import all_core_root_specs, ensure_core_dependencies, ensure_patchelf_in_path_or_raise
|
||||
from .core import (
|
||||
all_core_root_specs,
|
||||
ensure_clingo_importable_or_raise,
|
||||
ensure_core_dependencies,
|
||||
ensure_gpg_in_path_or_raise,
|
||||
ensure_patchelf_in_path_or_raise,
|
||||
)
|
||||
from .environment import BootstrapEnvironment, ensure_environment_dependencies
|
||||
from .status import status_message
|
||||
|
||||
@@ -13,6 +19,8 @@
|
||||
"is_bootstrapping",
|
||||
"ensure_bootstrap_configuration",
|
||||
"ensure_core_dependencies",
|
||||
"ensure_gpg_in_path_or_raise",
|
||||
"ensure_clingo_importable_or_raise",
|
||||
"ensure_patchelf_in_path_or_raise",
|
||||
"all_core_root_specs",
|
||||
"ensure_environment_dependencies",
|
||||
|
||||
@@ -54,10 +54,14 @@ def _try_import_from_store(
|
||||
installed_specs = spack.store.STORE.db.query(query_spec, installed=True)
|
||||
|
||||
for candidate_spec in installed_specs:
|
||||
pkg = candidate_spec["python"].package
|
||||
# previously bootstrapped specs may not have a python-venv dependency.
|
||||
if candidate_spec.dependencies("python-venv"):
|
||||
python, *_ = candidate_spec.dependencies("python-venv")
|
||||
else:
|
||||
python, *_ = candidate_spec.dependencies("python")
|
||||
module_paths = [
|
||||
os.path.join(candidate_spec.prefix, pkg.purelib),
|
||||
os.path.join(candidate_spec.prefix, pkg.platlib),
|
||||
os.path.join(candidate_spec.prefix, python.package.purelib),
|
||||
os.path.join(candidate_spec.prefix, python.package.platlib),
|
||||
]
|
||||
path_before = list(sys.path)
|
||||
|
||||
|
||||
@@ -173,35 +173,14 @@ def _read_metadata(self, package_name: str) -> Any:
|
||||
return data
|
||||
|
||||
def _install_by_hash(
|
||||
self,
|
||||
pkg_hash: str,
|
||||
pkg_sha256: str,
|
||||
index: List[spack.spec.Spec],
|
||||
bincache_platform: spack.platforms.Platform,
|
||||
self, pkg_hash: str, pkg_sha256: str, bincache_platform: spack.platforms.Platform
|
||||
) -> None:
|
||||
index_spec = next(x for x in index if x.dag_hash() == pkg_hash)
|
||||
# Reconstruct the compiler that we need to use for bootstrapping
|
||||
compiler_entry = {
|
||||
"modules": [],
|
||||
"operating_system": str(index_spec.os),
|
||||
"paths": {
|
||||
"cc": "/dev/null",
|
||||
"cxx": "/dev/null",
|
||||
"f77": "/dev/null",
|
||||
"fc": "/dev/null",
|
||||
},
|
||||
"spec": str(index_spec.compiler),
|
||||
"target": str(index_spec.target.family),
|
||||
}
|
||||
with spack.platforms.use_platform(bincache_platform):
|
||||
with spack.config.override("compilers", [{"compiler": compiler_entry}]):
|
||||
spec_str = "/" + pkg_hash
|
||||
query = spack.binary_distribution.BinaryCacheQuery(all_architectures=True)
|
||||
matches = spack.store.find([spec_str], multiple=False, query_fn=query)
|
||||
for match in matches:
|
||||
spack.binary_distribution.install_root_node(
|
||||
match, unsigned=True, force=True, sha256=pkg_sha256
|
||||
)
|
||||
query = spack.binary_distribution.BinaryCacheQuery(all_architectures=True)
|
||||
for match in spack.store.find([f"/{pkg_hash}"], multiple=False, query_fn=query):
|
||||
spack.binary_distribution.install_root_node(
|
||||
match, unsigned=True, force=True, sha256=pkg_sha256
|
||||
)
|
||||
|
||||
def _install_and_test(
|
||||
self,
|
||||
@@ -232,7 +211,7 @@ def _install_and_test(
|
||||
continue
|
||||
|
||||
for _, pkg_hash, pkg_sha256 in item["binaries"]:
|
||||
self._install_by_hash(pkg_hash, pkg_sha256, index, bincache_platform)
|
||||
self._install_by_hash(pkg_hash, pkg_sha256, bincache_platform)
|
||||
|
||||
info: ConfigDictionary = {}
|
||||
if test_fn(query_spec=abstract_spec, query_info=info):
|
||||
@@ -291,10 +270,6 @@ def try_import(self, module: str, abstract_spec_str: str) -> bool:
|
||||
with spack_python_interpreter():
|
||||
# Add hint to use frontend operating system on Cray
|
||||
concrete_spec = spack.spec.Spec(abstract_spec_str + " ^" + spec_for_current_python())
|
||||
# This is needed to help the old concretizer taking the `setuptools` dependency
|
||||
# only when bootstrapping from sources on Python 3.12
|
||||
if spec_for_current_python() == "python@3.12":
|
||||
concrete_spec.constrain("+force_setuptools")
|
||||
|
||||
if module == "clingo":
|
||||
# TODO: remove when the old concretizer is deprecated # pylint: disable=fixme
|
||||
@@ -559,6 +534,41 @@ def ensure_patchelf_in_path_or_raise() -> spack.util.executable.Executable:
|
||||
)
|
||||
|
||||
|
||||
def ensure_winsdk_external_or_raise() -> None:
|
||||
"""Ensure the Windows SDK + WGL are available on system
|
||||
If both of these package are found, the Spack user or bootstrap
|
||||
configuration (depending on where Spack is running)
|
||||
will be updated to include all versions and variants detected.
|
||||
If either the WDK or WSDK are not found, this method will raise
|
||||
a RuntimeError.
|
||||
|
||||
**NOTE:** This modifies the Spack config in the current scope,
|
||||
either user or environment depending on the calling context.
|
||||
This is different from all other current bootstrap dependency
|
||||
checks.
|
||||
"""
|
||||
if set(["win-sdk", "wgl"]).issubset(spack.config.get("packages").keys()):
|
||||
return
|
||||
externals = spack.detection.by_path(["win-sdk", "wgl"])
|
||||
if not set(["win-sdk", "wgl"]) == externals.keys():
|
||||
missing_packages_lst = []
|
||||
if "wgl" not in externals:
|
||||
missing_packages_lst.append("wgl")
|
||||
if "win-sdk" not in externals:
|
||||
missing_packages_lst.append("win-sdk")
|
||||
missing_packages = " & ".join(missing_packages_lst)
|
||||
raise RuntimeError(
|
||||
f"Unable to find the {missing_packages}, please install these packages \
|
||||
via the Visual Studio installer \
|
||||
before proceeding with Spack or provide the path to a non standard install with \
|
||||
'spack external find --path'"
|
||||
)
|
||||
# wgl/sdk are not required for bootstrapping Spack, but
|
||||
# are required for building anything non trivial
|
||||
# add to user config so they can be used by subsequent Spack ops
|
||||
spack.detection.update_configuration(externals, buildable=False)
|
||||
|
||||
|
||||
def ensure_core_dependencies() -> None:
|
||||
"""Ensure the presence of all the core dependencies."""
|
||||
if sys.platform.lower() == "linux":
|
||||
|
||||
@@ -3,13 +3,11 @@
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
"""Bootstrap non-core Spack dependencies from an environment."""
|
||||
import glob
|
||||
import hashlib
|
||||
import os
|
||||
import pathlib
|
||||
import sys
|
||||
import warnings
|
||||
from typing import List
|
||||
from typing import Iterable, List
|
||||
|
||||
import archspec.cpu
|
||||
|
||||
@@ -28,6 +26,16 @@
|
||||
class BootstrapEnvironment(spack.environment.Environment):
|
||||
"""Environment to install dependencies of Spack for a given interpreter and architecture"""
|
||||
|
||||
def __init__(self) -> None:
|
||||
if not self.spack_yaml().exists():
|
||||
self._write_spack_yaml_file()
|
||||
super().__init__(self.environment_root())
|
||||
|
||||
# Remove python package roots created before python-venv was introduced
|
||||
for s in self.concrete_roots():
|
||||
if "python" in s.package.extendees and not s.dependencies("python-venv"):
|
||||
self.deconcretize(s)
|
||||
|
||||
@classmethod
|
||||
def spack_dev_requirements(cls) -> List[str]:
|
||||
"""Spack development requirements"""
|
||||
@@ -59,31 +67,19 @@ def view_root(cls) -> pathlib.Path:
|
||||
return cls.environment_root().joinpath("view")
|
||||
|
||||
@classmethod
|
||||
def pythonpaths(cls) -> List[str]:
|
||||
"""Paths to be added to sys.path or PYTHONPATH"""
|
||||
python_dir_part = f"python{'.'.join(str(x) for x in sys.version_info[:2])}"
|
||||
glob_expr = str(cls.view_root().joinpath("**", python_dir_part, "**"))
|
||||
result = glob.glob(glob_expr)
|
||||
if not result:
|
||||
msg = f"Cannot find any Python path in {cls.view_root()}"
|
||||
warnings.warn(msg)
|
||||
return result
|
||||
|
||||
@classmethod
|
||||
def bin_dirs(cls) -> List[pathlib.Path]:
|
||||
def bin_dir(cls) -> pathlib.Path:
|
||||
"""Paths to be added to PATH"""
|
||||
return [cls.view_root().joinpath("bin")]
|
||||
return cls.view_root().joinpath("bin")
|
||||
|
||||
def python_dirs(self) -> Iterable[pathlib.Path]:
|
||||
python = next(s for s in self.all_specs_generator() if s.name == "python-venv").package
|
||||
return {self.view_root().joinpath(p) for p in (python.platlib, python.purelib)}
|
||||
|
||||
@classmethod
|
||||
def spack_yaml(cls) -> pathlib.Path:
|
||||
"""Environment spack.yaml file"""
|
||||
return cls.environment_root().joinpath("spack.yaml")
|
||||
|
||||
def __init__(self) -> None:
|
||||
if not self.spack_yaml().exists():
|
||||
self._write_spack_yaml_file()
|
||||
super().__init__(self.environment_root())
|
||||
|
||||
def update_installations(self) -> None:
|
||||
"""Update the installations of this environment."""
|
||||
log_enabled = tty.is_debug() or tty.is_verbose()
|
||||
@@ -100,21 +96,13 @@ def update_installations(self) -> None:
|
||||
self.install_all()
|
||||
self.write(regenerate=True)
|
||||
|
||||
def update_syspath_and_environ(self) -> None:
|
||||
"""Update ``sys.path`` and the PATH, PYTHONPATH environment variables to point to
|
||||
the environment view.
|
||||
"""
|
||||
# Do minimal modifications to sys.path and environment variables. In particular, pay
|
||||
# attention to have the smallest PYTHONPATH / sys.path possible, since that may impact
|
||||
# the performance of the current interpreter
|
||||
sys.path.extend(self.pythonpaths())
|
||||
os.environ["PATH"] = os.pathsep.join(
|
||||
[str(x) for x in self.bin_dirs()] + os.environ.get("PATH", "").split(os.pathsep)
|
||||
)
|
||||
os.environ["PYTHONPATH"] = os.pathsep.join(
|
||||
os.environ.get("PYTHONPATH", "").split(os.pathsep)
|
||||
+ [str(x) for x in self.pythonpaths()]
|
||||
)
|
||||
def load(self) -> None:
|
||||
"""Update PATH and sys.path."""
|
||||
# Make executables available (shouldn't need PYTHONPATH)
|
||||
os.environ["PATH"] = f"{self.bin_dir()}{os.pathsep}{os.environ.get('PATH', '')}"
|
||||
|
||||
# Spack itself imports pytest
|
||||
sys.path.extend(str(p) for p in self.python_dirs())
|
||||
|
||||
def _write_spack_yaml_file(self) -> None:
|
||||
tty.msg(
|
||||
@@ -164,4 +152,4 @@ def ensure_environment_dependencies() -> None:
|
||||
_add_externals_if_missing()
|
||||
with BootstrapEnvironment() as env:
|
||||
env.update_installations()
|
||||
env.update_syspath_and_environ()
|
||||
env.load()
|
||||
|
||||
@@ -43,7 +43,7 @@
|
||||
from collections import defaultdict
|
||||
from enum import Flag, auto
|
||||
from itertools import chain
|
||||
from typing import List, Tuple
|
||||
from typing import Dict, List, Set, Tuple
|
||||
|
||||
import llnl.util.tty as tty
|
||||
from llnl.string import plural
|
||||
@@ -57,8 +57,10 @@
|
||||
import spack.build_systems.meson
|
||||
import spack.build_systems.python
|
||||
import spack.builder
|
||||
import spack.compilers
|
||||
import spack.config
|
||||
import spack.deptypes as dt
|
||||
import spack.error
|
||||
import spack.main
|
||||
import spack.package_base
|
||||
import spack.paths
|
||||
@@ -66,6 +68,7 @@
|
||||
import spack.repo
|
||||
import spack.schema.environment
|
||||
import spack.spec
|
||||
import spack.stage
|
||||
import spack.store
|
||||
import spack.subprocess_context
|
||||
import spack.user_environment
|
||||
@@ -78,7 +81,7 @@
|
||||
from spack.installer import InstallError
|
||||
from spack.util.cpus import determine_number_of_jobs
|
||||
from spack.util.environment import (
|
||||
SYSTEM_DIRS,
|
||||
SYSTEM_DIR_CASE_ENTRY,
|
||||
EnvironmentModifications,
|
||||
env_flag,
|
||||
filter_system_paths,
|
||||
@@ -101,9 +104,13 @@
|
||||
# Spack's compiler wrappers.
|
||||
#
|
||||
SPACK_ENV_PATH = "SPACK_ENV_PATH"
|
||||
SPACK_MANAGED_DIRS = "SPACK_MANAGED_DIRS"
|
||||
SPACK_INCLUDE_DIRS = "SPACK_INCLUDE_DIRS"
|
||||
SPACK_LINK_DIRS = "SPACK_LINK_DIRS"
|
||||
SPACK_RPATH_DIRS = "SPACK_RPATH_DIRS"
|
||||
SPACK_STORE_INCLUDE_DIRS = "SPACK_STORE_INCLUDE_DIRS"
|
||||
SPACK_STORE_LINK_DIRS = "SPACK_STORE_LINK_DIRS"
|
||||
SPACK_STORE_RPATH_DIRS = "SPACK_STORE_RPATH_DIRS"
|
||||
SPACK_RPATH_DEPS = "SPACK_RPATH_DEPS"
|
||||
SPACK_LINK_DEPS = "SPACK_LINK_DEPS"
|
||||
SPACK_PREFIX = "SPACK_PREFIX"
|
||||
@@ -416,7 +423,7 @@ def set_compiler_environment_variables(pkg, env):
|
||||
|
||||
env.set("SPACK_COMPILER_SPEC", str(spec.compiler))
|
||||
|
||||
env.set("SPACK_SYSTEM_DIRS", ":".join(SYSTEM_DIRS))
|
||||
env.set("SPACK_SYSTEM_DIRS", SYSTEM_DIR_CASE_ENTRY)
|
||||
|
||||
compiler.setup_custom_environment(pkg, env)
|
||||
|
||||
@@ -544,9 +551,26 @@ def update_compiler_args_for_dep(dep):
|
||||
include_dirs = list(dedupe(filter_system_paths(include_dirs)))
|
||||
rpath_dirs = list(dedupe(filter_system_paths(rpath_dirs)))
|
||||
|
||||
env.set(SPACK_LINK_DIRS, ":".join(link_dirs))
|
||||
env.set(SPACK_INCLUDE_DIRS, ":".join(include_dirs))
|
||||
env.set(SPACK_RPATH_DIRS, ":".join(rpath_dirs))
|
||||
# Spack managed directories include the stage, store and upstream stores. We extend this with
|
||||
# their real paths to make it more robust (e.g. /tmp vs /private/tmp on macOS).
|
||||
spack_managed_dirs: Set[str] = {
|
||||
spack.stage.get_stage_root(),
|
||||
spack.store.STORE.db.root,
|
||||
*(db.root for db in spack.store.STORE.db.upstream_dbs),
|
||||
}
|
||||
spack_managed_dirs.update([os.path.realpath(p) for p in spack_managed_dirs])
|
||||
|
||||
env.set(SPACK_MANAGED_DIRS, "|".join(f'"{p}/"*' for p in sorted(spack_managed_dirs)))
|
||||
is_spack_managed = lambda p: any(p.startswith(store) for store in spack_managed_dirs)
|
||||
link_dirs_spack, link_dirs_system = stable_partition(link_dirs, is_spack_managed)
|
||||
include_dirs_spack, include_dirs_system = stable_partition(include_dirs, is_spack_managed)
|
||||
rpath_dirs_spack, rpath_dirs_system = stable_partition(rpath_dirs, is_spack_managed)
|
||||
env.set(SPACK_LINK_DIRS, ":".join(link_dirs_system))
|
||||
env.set(SPACK_INCLUDE_DIRS, ":".join(include_dirs_system))
|
||||
env.set(SPACK_RPATH_DIRS, ":".join(rpath_dirs_system))
|
||||
env.set(SPACK_STORE_LINK_DIRS, ":".join(link_dirs_spack))
|
||||
env.set(SPACK_STORE_INCLUDE_DIRS, ":".join(include_dirs_spack))
|
||||
env.set(SPACK_STORE_RPATH_DIRS, ":".join(rpath_dirs_spack))
|
||||
|
||||
|
||||
def set_package_py_globals(pkg, context: Context = Context.BUILD):
|
||||
@@ -583,10 +607,22 @@ def set_package_py_globals(pkg, context: Context = Context.BUILD):
|
||||
# Put spack compiler paths in module scope. (Some packages use it
|
||||
# in setup_run_environment etc, so don't put it context == build)
|
||||
link_dir = spack.paths.build_env_path
|
||||
module.spack_cc = os.path.join(link_dir, pkg.compiler.link_paths["cc"])
|
||||
module.spack_cxx = os.path.join(link_dir, pkg.compiler.link_paths["cxx"])
|
||||
module.spack_f77 = os.path.join(link_dir, pkg.compiler.link_paths["f77"])
|
||||
module.spack_fc = os.path.join(link_dir, pkg.compiler.link_paths["fc"])
|
||||
pkg_compiler = None
|
||||
try:
|
||||
pkg_compiler = pkg.compiler
|
||||
except spack.compilers.NoCompilerForSpecError as e:
|
||||
tty.debug(f"cannot set 'spack_cc': {str(e)}")
|
||||
|
||||
if pkg_compiler is not None:
|
||||
module.spack_cc = os.path.join(link_dir, pkg_compiler.link_paths["cc"])
|
||||
module.spack_cxx = os.path.join(link_dir, pkg_compiler.link_paths["cxx"])
|
||||
module.spack_f77 = os.path.join(link_dir, pkg_compiler.link_paths["f77"])
|
||||
module.spack_fc = os.path.join(link_dir, pkg_compiler.link_paths["fc"])
|
||||
else:
|
||||
module.spack_cc = None
|
||||
module.spack_cxx = None
|
||||
module.spack_f77 = None
|
||||
module.spack_fc = None
|
||||
|
||||
# Useful directories within the prefix are encapsulated in
|
||||
# a Prefix object.
|
||||
@@ -694,12 +730,28 @@ def _static_to_shared_library(arch, compiler, static_lib, shared_lib=None, **kwa
|
||||
return compiler(*compiler_args, output=compiler_output)
|
||||
|
||||
|
||||
def get_rpath_deps(pkg):
|
||||
"""Return immediate or transitive RPATHs depending on the package."""
|
||||
if pkg.transitive_rpaths:
|
||||
return [d for d in pkg.spec.traverse(root=False, deptype=("link"))]
|
||||
else:
|
||||
return pkg.spec.dependencies(deptype="link")
|
||||
def _get_rpath_deps_from_spec(
|
||||
spec: spack.spec.Spec, transitive_rpaths: bool
|
||||
) -> List[spack.spec.Spec]:
|
||||
if not transitive_rpaths:
|
||||
return spec.dependencies(deptype=dt.LINK)
|
||||
|
||||
by_name: Dict[str, spack.spec.Spec] = {}
|
||||
|
||||
for dep in spec.traverse(root=False, deptype=dt.LINK):
|
||||
lookup = by_name.get(dep.name)
|
||||
if lookup is None:
|
||||
by_name[dep.name] = dep
|
||||
elif lookup.version < dep.version:
|
||||
by_name[dep.name] = dep
|
||||
|
||||
return list(by_name.values())
|
||||
|
||||
|
||||
def get_rpath_deps(pkg: spack.package_base.PackageBase) -> List[spack.spec.Spec]:
|
||||
"""Return immediate or transitive dependencies (depending on the package) that need to be
|
||||
rpath'ed. If a package occurs multiple times, the newest version is kept."""
|
||||
return _get_rpath_deps_from_spec(pkg.spec, pkg.transitive_rpaths)
|
||||
|
||||
|
||||
def get_rpaths(pkg):
|
||||
@@ -789,7 +841,7 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
|
||||
for mod in ["cray-mpich", "cray-libsci"]:
|
||||
module("unload", mod)
|
||||
|
||||
if target.module_name:
|
||||
if target and target.module_name:
|
||||
load_module(target.module_name)
|
||||
|
||||
load_external_modules(pkg)
|
||||
|
||||
@@ -434,11 +434,6 @@ def _do_patch_libtool(self):
|
||||
r"crtendS\.o",
|
||||
]:
|
||||
x.filter(regex=(rehead + o), repl="")
|
||||
elif self.pkg.compiler.name == "dpcpp":
|
||||
# Hack to filter out spurious predep_objects when building with Intel dpcpp
|
||||
# (see https://github.com/spack/spack/issues/32863):
|
||||
x.filter(regex=r"^(predep_objects=.*)/tmp/conftest-[0-9A-Fa-f]+\.o", repl=r"\1")
|
||||
x.filter(regex=r"^(predep_objects=.*)/tmp/a-[0-9A-Fa-f]+\.o", repl=r"\1")
|
||||
elif self.pkg.compiler.name == "nag":
|
||||
for tag in ["fc", "f77"]:
|
||||
marker = markers[tag]
|
||||
|
||||
@@ -4,6 +4,7 @@
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
import collections.abc
|
||||
import os
|
||||
import re
|
||||
from typing import Tuple
|
||||
|
||||
import llnl.util.filesystem as fs
|
||||
@@ -15,6 +16,12 @@
|
||||
from .cmake import CMakeBuilder, CMakePackage
|
||||
|
||||
|
||||
def spec_uses_toolchain(spec):
|
||||
gcc_toolchain_regex = re.compile(".*gcc-toolchain.*")
|
||||
using_toolchain = list(filter(gcc_toolchain_regex.match, spec.compiler_flags["cxxflags"]))
|
||||
return using_toolchain
|
||||
|
||||
|
||||
def cmake_cache_path(name, value, comment="", force=False):
|
||||
"""Generate a string for a cmake cache variable"""
|
||||
force_str = " FORCE" if force else ""
|
||||
@@ -213,7 +220,7 @@ def initconfig_mpi_entries(self):
|
||||
else:
|
||||
# starting with cmake 3.10, FindMPI expects MPIEXEC_EXECUTABLE
|
||||
# vs the older versions which expect MPIEXEC
|
||||
if self.pkg.spec["cmake"].satisfies("@3.10:"):
|
||||
if spec["cmake"].satisfies("@3.10:"):
|
||||
entries.append(cmake_cache_path("MPIEXEC_EXECUTABLE", mpiexec))
|
||||
else:
|
||||
entries.append(cmake_cache_path("MPIEXEC", mpiexec))
|
||||
@@ -248,12 +255,17 @@ def initconfig_hardware_entries(self):
|
||||
# Include the deprecated CUDA_TOOLKIT_ROOT_DIR for supporting BLT packages
|
||||
entries.append(cmake_cache_path("CUDA_TOOLKIT_ROOT_DIR", cudatoolkitdir))
|
||||
|
||||
archs = spec.variants["cuda_arch"].value
|
||||
if archs[0] != "none":
|
||||
arch_str = ";".join(archs)
|
||||
entries.append(
|
||||
cmake_cache_string("CMAKE_CUDA_ARCHITECTURES", "{0}".format(arch_str))
|
||||
)
|
||||
# CUDA_FLAGS
|
||||
cuda_flags = []
|
||||
|
||||
if not spec.satisfies("cuda_arch=none"):
|
||||
cuda_archs = ";".join(spec.variants["cuda_arch"].value)
|
||||
entries.append(cmake_cache_string("CMAKE_CUDA_ARCHITECTURES", cuda_archs))
|
||||
|
||||
if spec_uses_toolchain(spec):
|
||||
cuda_flags.append("-Xcompiler {}".format(spec_uses_toolchain(spec)[0]))
|
||||
|
||||
entries.append(cmake_cache_string("CMAKE_CUDA_FLAGS", " ".join(cuda_flags)))
|
||||
|
||||
if "+rocm" in spec:
|
||||
entries.append("#------------------{0}".format("-" * 30))
|
||||
@@ -262,9 +274,6 @@ def initconfig_hardware_entries(self):
|
||||
|
||||
# Explicitly setting HIP_ROOT_DIR may be a patch that is no longer necessary
|
||||
entries.append(cmake_cache_path("HIP_ROOT_DIR", "{0}".format(spec["hip"].prefix)))
|
||||
entries.append(
|
||||
cmake_cache_path("HIP_CXX_COMPILER", "{0}".format(self.spec["hip"].hipcc))
|
||||
)
|
||||
llvm_bin = spec["llvm-amdgpu"].prefix.bin
|
||||
llvm_prefix = spec["llvm-amdgpu"].prefix
|
||||
# Some ROCm systems seem to point to /<path>/rocm-<ver>/ and
|
||||
@@ -277,11 +286,9 @@ def initconfig_hardware_entries(self):
|
||||
archs = self.spec.variants["amdgpu_target"].value
|
||||
if archs[0] != "none":
|
||||
arch_str = ";".join(archs)
|
||||
entries.append(
|
||||
cmake_cache_string("CMAKE_HIP_ARCHITECTURES", "{0}".format(arch_str))
|
||||
)
|
||||
entries.append(cmake_cache_string("AMDGPU_TARGETS", "{0}".format(arch_str)))
|
||||
entries.append(cmake_cache_string("GPU_TARGETS", "{0}".format(arch_str)))
|
||||
entries.append(cmake_cache_string("CMAKE_HIP_ARCHITECTURES", arch_str))
|
||||
entries.append(cmake_cache_string("AMDGPU_TARGETS", arch_str))
|
||||
entries.append(cmake_cache_string("GPU_TARGETS", arch_str))
|
||||
|
||||
return entries
|
||||
|
||||
|
||||
@@ -16,7 +16,7 @@
|
||||
|
||||
|
||||
class CargoPackage(spack.package_base.PackageBase):
|
||||
"""Specialized class for packages built using a Makefiles."""
|
||||
"""Specialized class for packages built using cargo."""
|
||||
|
||||
#: This attribute is used in UI queries that need to know the build
|
||||
#: system base class
|
||||
|
||||
@@ -39,16 +39,11 @@ def _maybe_set_python_hints(pkg: spack.package_base.PackageBase, args: List[str]
|
||||
"""Set the PYTHON_EXECUTABLE, Python_EXECUTABLE, and Python3_EXECUTABLE CMake variables
|
||||
if the package has Python as build or link dep and ``find_python_hints`` is set to True. See
|
||||
``find_python_hints`` for context."""
|
||||
if not getattr(pkg, "find_python_hints", False):
|
||||
if not getattr(pkg, "find_python_hints", False) or not pkg.spec.dependencies(
|
||||
"python", dt.BUILD | dt.LINK
|
||||
):
|
||||
return
|
||||
pythons = pkg.spec.dependencies("python", dt.BUILD | dt.LINK)
|
||||
if len(pythons) != 1:
|
||||
return
|
||||
try:
|
||||
python_executable = pythons[0].package.command.path
|
||||
except RuntimeError:
|
||||
return
|
||||
|
||||
python_executable = pkg.spec["python"].command.path
|
||||
args.extend(
|
||||
[
|
||||
CMakeBuilder.define("PYTHON_EXECUTABLE", python_executable),
|
||||
|
||||
144
lib/spack/spack/build_systems/compiler.py
Normal file
144
lib/spack/spack/build_systems/compiler.py
Normal file
@@ -0,0 +1,144 @@
|
||||
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
import itertools
|
||||
import os
|
||||
import pathlib
|
||||
import re
|
||||
import sys
|
||||
from typing import Dict, List, Sequence, Tuple, Union
|
||||
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.lang import classproperty
|
||||
|
||||
import spack.compiler
|
||||
import spack.package_base
|
||||
|
||||
# Local "type" for type hints
|
||||
Path = Union[str, pathlib.Path]
|
||||
|
||||
|
||||
class CompilerPackage(spack.package_base.PackageBase):
|
||||
"""A Package mixin for all common logic for packages that implement compilers"""
|
||||
|
||||
# TODO: how do these play nicely with other tags
|
||||
tags: Sequence[str] = ["compiler"]
|
||||
|
||||
#: Optional suffix regexes for searching for this type of compiler.
|
||||
#: Suffixes are used by some frameworks, e.g. macports uses an '-mp-X.Y'
|
||||
#: version suffix for gcc.
|
||||
compiler_suffixes: List[str] = [r"-.*"]
|
||||
|
||||
#: Optional prefix regexes for searching for this compiler
|
||||
compiler_prefixes: List[str] = []
|
||||
|
||||
#: Compiler argument(s) that produces version information
|
||||
#: If multiple arguments, the earlier arguments must produce errors when invalid
|
||||
compiler_version_argument: Union[str, Tuple[str]] = "-dumpversion"
|
||||
|
||||
#: Regex used to extract version from compiler's output
|
||||
compiler_version_regex: str = "(.*)"
|
||||
|
||||
#: Static definition of languages supported by this class
|
||||
compiler_languages: Sequence[str] = ["c", "cxx", "fortran"]
|
||||
|
||||
def __init__(self, spec: "spack.spec.Spec"):
|
||||
super().__init__(spec)
|
||||
msg = f"Supported languages for {spec} are not a subset of possible supported languages"
|
||||
msg += f" supports: {self.supported_languages}, valid values: {self.compiler_languages}"
|
||||
assert set(self.supported_languages) <= set(self.compiler_languages), msg
|
||||
|
||||
@property
|
||||
def supported_languages(self) -> Sequence[str]:
|
||||
"""Dynamic definition of languages supported by this package"""
|
||||
return self.compiler_languages
|
||||
|
||||
@classproperty
|
||||
def compiler_names(cls) -> Sequence[str]:
|
||||
"""Construct list of compiler names from per-language names"""
|
||||
names = []
|
||||
for language in cls.compiler_languages:
|
||||
names.extend(getattr(cls, f"{language}_names"))
|
||||
return names
|
||||
|
||||
@classproperty
|
||||
def executables(cls) -> Sequence[str]:
|
||||
"""Construct executables for external detection from names, prefixes, and suffixes."""
|
||||
regexp_fmt = r"^({0}){1}({2})$"
|
||||
prefixes = [""] + cls.compiler_prefixes
|
||||
suffixes = [""] + cls.compiler_suffixes
|
||||
if sys.platform == "win32":
|
||||
ext = r"\.(?:exe|bat)"
|
||||
suffixes += [suf + ext for suf in suffixes]
|
||||
return [
|
||||
regexp_fmt.format(prefix, re.escape(name), suffix)
|
||||
for prefix, name, suffix in itertools.product(prefixes, cls.compiler_names, suffixes)
|
||||
]
|
||||
|
||||
@classmethod
|
||||
def determine_version(cls, exe: Path):
|
||||
version_argument = cls.compiler_version_argument
|
||||
if isinstance(version_argument, str):
|
||||
version_argument = (version_argument,)
|
||||
|
||||
for va in version_argument:
|
||||
try:
|
||||
output = spack.compiler.get_compiler_version_output(exe, va)
|
||||
match = re.search(cls.compiler_version_regex, output)
|
||||
if match:
|
||||
return ".".join(match.groups())
|
||||
except spack.util.executable.ProcessError:
|
||||
pass
|
||||
except Exception as e:
|
||||
tty.debug(
|
||||
f"[{__file__}] Cannot detect a valid version for the executable "
|
||||
f"{str(exe)}, for package '{cls.name}': {e}"
|
||||
)
|
||||
|
||||
@classmethod
|
||||
def compiler_bindir(cls, prefix: Path) -> Path:
|
||||
"""Overridable method for the location of the compiler bindir within the preifx"""
|
||||
return os.path.join(prefix, "bin")
|
||||
|
||||
@classmethod
|
||||
def determine_compiler_paths(cls, exes: Sequence[Path]) -> Dict[str, Path]:
|
||||
"""Compute the paths to compiler executables associated with this package
|
||||
|
||||
This is a helper method for ``determine_variants`` to compute the ``extra_attributes``
|
||||
to include with each spec object."""
|
||||
# There are often at least two copies (not symlinks) of each compiler executable in the
|
||||
# same directory: one with a canonical name, e.g. "gfortran", and another one with the
|
||||
# target prefix, e.g. "x86_64-pc-linux-gnu-gfortran". There also might be a copy of "gcc"
|
||||
# with the version suffix, e.g. "x86_64-pc-linux-gnu-gcc-6.3.0". To ensure the consistency
|
||||
# of values in the "paths" dictionary (i.e. we prefer all of them to reference copies
|
||||
# with canonical names if possible), we iterate over the executables in the reversed sorted
|
||||
# order:
|
||||
# First pass over languages identifies exes that are perfect matches for canonical names
|
||||
# Second pass checks for names with prefix/suffix
|
||||
# Second pass is sorted by language name length because longer named languages
|
||||
# e.g. cxx can often contain the names of shorter named languages
|
||||
# e.g. c (e.g. clang/clang++)
|
||||
paths = {}
|
||||
exes = sorted(exes, reverse=True)
|
||||
languages = {
|
||||
lang: getattr(cls, f"{lang}_names")
|
||||
for lang in sorted(cls.compiler_languages, key=len, reverse=True)
|
||||
}
|
||||
for exe in exes:
|
||||
for lang, names in languages.items():
|
||||
if os.path.basename(exe) in names:
|
||||
paths[lang] = exe
|
||||
break
|
||||
else:
|
||||
for lang, names in languages.items():
|
||||
if any(name in os.path.basename(exe) for name in names):
|
||||
paths[lang] = exe
|
||||
break
|
||||
|
||||
return paths
|
||||
|
||||
@classmethod
|
||||
def determine_variants(cls, exes: Sequence[Path], version_str: str) -> Tuple:
|
||||
# path determination is separated so it can be reused in subclasses
|
||||
return "", {"compilers": cls.determine_compiler_paths(exes=exes)}
|
||||
@@ -137,11 +137,14 @@ def cuda_flags(arch_list):
|
||||
conflicts("%gcc@11.2:", when="+cuda ^cuda@:11.5")
|
||||
conflicts("%gcc@12:", when="+cuda ^cuda@:11.8")
|
||||
conflicts("%gcc@13:", when="+cuda ^cuda@:12.3")
|
||||
conflicts("%gcc@14:", when="+cuda ^cuda@:12.4")
|
||||
conflicts("%clang@12:", when="+cuda ^cuda@:11.4.0")
|
||||
conflicts("%clang@13:", when="+cuda ^cuda@:11.5")
|
||||
conflicts("%clang@14:", when="+cuda ^cuda@:11.7")
|
||||
conflicts("%clang@15:", when="+cuda ^cuda@:12.0")
|
||||
conflicts("%clang@16:", when="+cuda ^cuda@:12.3")
|
||||
conflicts("%clang@16:", when="+cuda ^cuda@:12.1")
|
||||
conflicts("%clang@17:", when="+cuda ^cuda@:12.3")
|
||||
conflicts("%clang@18:", when="+cuda ^cuda@:12.4")
|
||||
|
||||
# https://gist.github.com/ax3l/9489132#gistcomment-3860114
|
||||
conflicts("%gcc@10", when="+cuda ^cuda@:11.4.0")
|
||||
|
||||
@@ -21,7 +21,7 @@
|
||||
|
||||
|
||||
class MakefilePackage(spack.package_base.PackageBase):
|
||||
"""Specialized class for packages built using a Makefiles."""
|
||||
"""Specialized class for packages built using Makefiles."""
|
||||
|
||||
#: This attribute is used in UI queries that need to know the build
|
||||
#: system base class
|
||||
|
||||
@@ -145,7 +145,7 @@ def install(self, pkg, spec, prefix):
|
||||
opts += self.nmake_install_args()
|
||||
if self.makefile_name:
|
||||
opts.append("/F{}".format(self.makefile_name))
|
||||
opts.append(self.define("PREFIX", prefix))
|
||||
opts.append(self.define("PREFIX", fs.windows_sfn(prefix)))
|
||||
with fs.working_dir(self.build_directory):
|
||||
inspect.getmodule(self.pkg).nmake(
|
||||
*opts, *self.install_targets, ignore_quotes=self.ignore_quotes
|
||||
|
||||
@@ -14,7 +14,7 @@
|
||||
from llnl.util.link_tree import LinkTree
|
||||
|
||||
from spack.build_environment import dso_suffix
|
||||
from spack.directives import conflicts, variant
|
||||
from spack.directives import conflicts, license, redistribute, variant
|
||||
from spack.package_base import InstallError
|
||||
from spack.util.environment import EnvironmentModifications
|
||||
from spack.util.executable import Executable
|
||||
@@ -26,10 +26,11 @@ class IntelOneApiPackage(Package):
|
||||
"""Base class for Intel oneAPI packages."""
|
||||
|
||||
homepage = "https://software.intel.com/oneapi"
|
||||
license("https://intel.ly/393CijO")
|
||||
|
||||
# oneAPI license does not allow mirroring outside of the
|
||||
# organization (e.g. University/Company).
|
||||
redistribute_source = False
|
||||
redistribute(source=False, binary=False)
|
||||
|
||||
for c in [
|
||||
"target=ppc64:",
|
||||
|
||||
@@ -138,16 +138,21 @@ def view_file_conflicts(self, view, merge_map):
|
||||
return conflicts
|
||||
|
||||
def add_files_to_view(self, view, merge_map, skip_if_exists=True):
|
||||
# Patch up shebangs to the python linked in the view only if python is built by Spack.
|
||||
if not self.extendee_spec or self.extendee_spec.external:
|
||||
# Patch up shebangs if the package extends Python and we put a Python interpreter in the
|
||||
# view.
|
||||
if not self.extendee_spec:
|
||||
return super().add_files_to_view(view, merge_map, skip_if_exists)
|
||||
|
||||
python, *_ = self.spec.dependencies("python-venv") or self.spec.dependencies("python")
|
||||
|
||||
if python.external:
|
||||
return super().add_files_to_view(view, merge_map, skip_if_exists)
|
||||
|
||||
# We only patch shebangs in the bin directory.
|
||||
copied_files: Dict[Tuple[int, int], str] = {} # File identifier -> source
|
||||
delayed_links: List[Tuple[str, str]] = [] # List of symlinks from merge map
|
||||
|
||||
bin_dir = self.spec.prefix.bin
|
||||
python_prefix = self.extendee_spec.prefix
|
||||
|
||||
for src, dst in merge_map.items():
|
||||
if skip_if_exists and os.path.lexists(dst):
|
||||
continue
|
||||
@@ -168,7 +173,7 @@ def add_files_to_view(self, view, merge_map, skip_if_exists=True):
|
||||
copied_files[(s.st_dev, s.st_ino)] = dst
|
||||
shutil.copy2(src, dst)
|
||||
fs.filter_file(
|
||||
python_prefix, os.path.abspath(view.get_projection_for_spec(self.spec)), dst
|
||||
python.prefix, os.path.abspath(view.get_projection_for_spec(self.spec)), dst
|
||||
)
|
||||
else:
|
||||
view.link(src, dst)
|
||||
@@ -199,14 +204,13 @@ def remove_files_from_view(self, view, merge_map):
|
||||
ignore_namespace = True
|
||||
|
||||
bin_dir = self.spec.prefix.bin
|
||||
global_view = self.extendee_spec.prefix == view.get_projection_for_spec(self.spec)
|
||||
|
||||
to_remove = []
|
||||
for src, dst in merge_map.items():
|
||||
if ignore_namespace and namespace_init(dst):
|
||||
continue
|
||||
|
||||
if global_view or not fs.path_contains_subdirectory(src, bin_dir):
|
||||
if not fs.path_contains_subdirectory(src, bin_dir):
|
||||
to_remove.append(dst)
|
||||
else:
|
||||
os.remove(dst)
|
||||
@@ -362,6 +366,12 @@ def list_url(cls) -> Optional[str]: # type: ignore[override]
|
||||
return f"https://pypi.org/simple/{name}/"
|
||||
return None
|
||||
|
||||
@property
|
||||
def python_spec(self):
|
||||
"""Get python-venv if it exists or python otherwise."""
|
||||
python, *_ = self.spec.dependencies("python-venv") or self.spec.dependencies("python")
|
||||
return python
|
||||
|
||||
@property
|
||||
def headers(self) -> HeaderList:
|
||||
"""Discover header files in platlib."""
|
||||
@@ -371,8 +381,9 @@ def headers(self) -> HeaderList:
|
||||
|
||||
# Headers should only be in include or platlib, but no harm in checking purelib too
|
||||
include = self.prefix.join(self.spec["python"].package.include).join(name)
|
||||
platlib = self.prefix.join(self.spec["python"].package.platlib).join(name)
|
||||
purelib = self.prefix.join(self.spec["python"].package.purelib).join(name)
|
||||
python = self.python_spec
|
||||
platlib = self.prefix.join(python.package.platlib).join(name)
|
||||
purelib = self.prefix.join(python.package.purelib).join(name)
|
||||
|
||||
headers_list = map(fs.find_all_headers, [include, platlib, purelib])
|
||||
headers = functools.reduce(operator.add, headers_list)
|
||||
@@ -391,8 +402,9 @@ def libs(self) -> LibraryList:
|
||||
name = self.spec.name[3:]
|
||||
|
||||
# Libraries should only be in platlib, but no harm in checking purelib too
|
||||
platlib = self.prefix.join(self.spec["python"].package.platlib).join(name)
|
||||
purelib = self.prefix.join(self.spec["python"].package.purelib).join(name)
|
||||
python = self.python_spec
|
||||
platlib = self.prefix.join(python.package.platlib).join(name)
|
||||
purelib = self.prefix.join(python.package.purelib).join(name)
|
||||
|
||||
find_all_libraries = functools.partial(fs.find_all_libraries, recursive=True)
|
||||
libs_list = map(find_all_libraries, [platlib, purelib])
|
||||
@@ -504,6 +516,8 @@ def global_options(self, spec: Spec, prefix: Prefix) -> Iterable[str]:
|
||||
|
||||
def install(self, pkg: PythonPackage, spec: Spec, prefix: Prefix) -> None:
|
||||
"""Install everything from build directory."""
|
||||
pip = spec["python"].command
|
||||
pip.add_default_arg("-m", "pip")
|
||||
|
||||
args = PythonPipBuilder.std_args(pkg) + [f"--prefix={prefix}"]
|
||||
|
||||
@@ -519,14 +533,6 @@ def install(self, pkg: PythonPackage, spec: Spec, prefix: Prefix) -> None:
|
||||
else:
|
||||
args.append(".")
|
||||
|
||||
pip = spec["python"].command
|
||||
# Hide user packages, since we don't have build isolation. This is
|
||||
# necessary because pip / setuptools may run hooks from arbitrary
|
||||
# packages during the build. There is no equivalent variable to hide
|
||||
# system packages, so this is not reliable for external Python.
|
||||
pip.add_default_env("PYTHONNOUSERSITE", "1")
|
||||
pip.add_default_arg("-m")
|
||||
pip.add_default_arg("pip")
|
||||
with fs.working_dir(self.build_directory):
|
||||
pip(*args)
|
||||
|
||||
|
||||
@@ -75,9 +75,12 @@
|
||||
# does not like its directory structure.
|
||||
#
|
||||
|
||||
import os
|
||||
|
||||
import spack.variant
|
||||
from spack.directives import conflicts, depends_on, variant
|
||||
from spack.package_base import PackageBase
|
||||
from spack.util.environment import EnvironmentModifications
|
||||
|
||||
|
||||
class ROCmPackage(PackageBase):
|
||||
@@ -154,6 +157,25 @@ def hip_flags(amdgpu_target):
|
||||
archs = ",".join(amdgpu_target)
|
||||
return "--amdgpu-target={0}".format(archs)
|
||||
|
||||
def asan_on(self, env: EnvironmentModifications):
|
||||
llvm_path = self.spec["llvm-amdgpu"].prefix
|
||||
env.set("CC", llvm_path + "/bin/clang")
|
||||
env.set("CXX", llvm_path + "/bin/clang++")
|
||||
env.set("ASAN_OPTIONS", "detect_leaks=0")
|
||||
|
||||
for root, _, files in os.walk(llvm_path):
|
||||
if "libclang_rt.asan-x86_64.so" in files:
|
||||
asan_lib_path = root
|
||||
env.prepend_path("LD_LIBRARY_PATH", asan_lib_path)
|
||||
if "rhel" in self.spec.os or "sles" in self.spec.os:
|
||||
SET_DWARF_VERSION_4 = "-gdwarf-5"
|
||||
else:
|
||||
SET_DWARF_VERSION_4 = ""
|
||||
|
||||
env.set("CFLAGS", f"-fsanitize=address -shared-libasan -g {SET_DWARF_VERSION_4}")
|
||||
env.set("CXXFLAGS", f"-fsanitize=address -shared-libasan -g {SET_DWARF_VERSION_4}")
|
||||
env.set("LDFLAGS", "-Wl,--enable-new-dtags -fuse-ld=lld -fsanitize=address -g -Wl,")
|
||||
|
||||
# HIP version vs Architecture
|
||||
|
||||
# TODO: add a bunch of lines like:
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -334,8 +334,7 @@ def display_specs(specs, args=None, **kwargs):
|
||||
variants (bool): Show variants with specs
|
||||
indent (int): indent each line this much
|
||||
groups (bool): display specs grouped by arch/compiler (default True)
|
||||
decorators (dict): dictionary mappng specs to decorators
|
||||
header_callback (typing.Callable): called at start of arch/compiler groups
|
||||
decorator (typing.Callable): function to call to decorate specs
|
||||
all_headers (bool): show headers even when arch/compiler aren't defined
|
||||
output (typing.IO): A file object to write to. Default is ``sys.stdout``
|
||||
|
||||
@@ -384,15 +383,13 @@ def get_arg(name, default=None):
|
||||
vfmt = "{variants}" if variants else ""
|
||||
format_string = nfmt + "{@version}" + ffmt + vfmt
|
||||
|
||||
transform = {"package": decorator, "fullpackage": decorator}
|
||||
|
||||
def fmt(s, depth=0):
|
||||
"""Formatter function for all output specs"""
|
||||
string = ""
|
||||
if hashes:
|
||||
string += gray_hash(s, hlen) + " "
|
||||
string += depth * " "
|
||||
string += s.cformat(format_string, transform=transform)
|
||||
string += decorator(s, s.cformat(format_string))
|
||||
return string
|
||||
|
||||
def format_list(specs):
|
||||
@@ -451,7 +448,7 @@ def filter_loaded_specs(specs):
|
||||
return [x for x in specs if x.dag_hash() in hashes]
|
||||
|
||||
|
||||
def print_how_many_pkgs(specs, pkg_type=""):
|
||||
def print_how_many_pkgs(specs, pkg_type="", suffix=""):
|
||||
"""Given a list of specs, this will print a message about how many
|
||||
specs are in that list.
|
||||
|
||||
@@ -462,7 +459,7 @@ def print_how_many_pkgs(specs, pkg_type=""):
|
||||
category, e.g. if pkg_type is "installed" then the message
|
||||
would be "3 installed packages"
|
||||
"""
|
||||
tty.msg("%s" % llnl.string.plural(len(specs), pkg_type + " package"))
|
||||
tty.msg("%s" % llnl.string.plural(len(specs), pkg_type + " package") + suffix)
|
||||
|
||||
|
||||
def spack_is_git_repo():
|
||||
|
||||
@@ -84,7 +84,7 @@ def externals(parser, args):
|
||||
return
|
||||
|
||||
pkgs = args.name or spack.repo.PATH.all_package_names()
|
||||
reports = spack.audit.run_group(args.subcommand, pkgs=pkgs)
|
||||
reports = spack.audit.run_group(args.subcommand, pkgs=pkgs, debug_log=tty.debug)
|
||||
_process_reports(reports)
|
||||
|
||||
|
||||
|
||||
@@ -13,7 +13,6 @@
|
||||
import shutil
|
||||
import sys
|
||||
import tempfile
|
||||
import urllib.request
|
||||
from typing import Dict, List, Optional, Tuple, Union
|
||||
|
||||
import llnl.util.tty as tty
|
||||
@@ -54,6 +53,7 @@
|
||||
from spack.oci.oci import (
|
||||
copy_missing_layers_with_retry,
|
||||
get_manifest_and_config_with_retry,
|
||||
list_tags,
|
||||
upload_blob_with_retry,
|
||||
upload_manifest_with_retry,
|
||||
)
|
||||
@@ -133,6 +133,11 @@ def setup_parser(subparser: argparse.ArgumentParser):
|
||||
help="when pushing to an OCI registry, tag an image containing all root specs and their "
|
||||
"runtime dependencies",
|
||||
)
|
||||
push.add_argument(
|
||||
"--private",
|
||||
action="store_true",
|
||||
help="for a private mirror, include non-redistributable packages",
|
||||
)
|
||||
arguments.add_common_arguments(push, ["specs", "jobs"])
|
||||
push.set_defaults(func=push_fn)
|
||||
|
||||
@@ -275,23 +280,37 @@ def setup_parser(subparser: argparse.ArgumentParser):
|
||||
|
||||
# Sync buildcache entries from one mirror to another
|
||||
sync = subparsers.add_parser("sync", help=sync_fn.__doc__)
|
||||
sync.add_argument(
|
||||
"--manifest-glob", help="a quoted glob pattern identifying copy manifest files"
|
||||
|
||||
sync_manifest_source = sync.add_argument_group(
|
||||
"Manifest Source",
|
||||
"Specify a list of build cache objects to sync using manifest file(s)."
|
||||
'This option takes the place of the "source mirror" for synchronization'
|
||||
'and optionally takes a "destination mirror" ',
|
||||
)
|
||||
sync.add_argument(
|
||||
sync_manifest_source.add_argument(
|
||||
"--manifest-glob", help="a quoted glob pattern identifying CI rebuild manifest files"
|
||||
)
|
||||
sync_source_mirror = sync.add_argument_group(
|
||||
"Named Source",
|
||||
"Specify a single registered source mirror to synchronize from. This option requires"
|
||||
"the specification of a destination mirror.",
|
||||
)
|
||||
sync_source_mirror.add_argument(
|
||||
"src_mirror",
|
||||
metavar="source mirror",
|
||||
type=arguments.mirror_name_or_url,
|
||||
nargs="?",
|
||||
type=arguments.mirror_name_or_url,
|
||||
help="source mirror name, path, or URL",
|
||||
)
|
||||
|
||||
sync.add_argument(
|
||||
"dest_mirror",
|
||||
metavar="destination mirror",
|
||||
type=arguments.mirror_name_or_url,
|
||||
nargs="?",
|
||||
type=arguments.mirror_name_or_url,
|
||||
help="destination mirror name, path, or URL",
|
||||
)
|
||||
|
||||
sync.set_defaults(func=sync_fn)
|
||||
|
||||
# Update buildcache index without copying any additional packages
|
||||
@@ -353,6 +372,25 @@ def _make_pool() -> MaybePool:
|
||||
return NoPool()
|
||||
|
||||
|
||||
def _skip_no_redistribute_for_public(specs):
|
||||
remaining_specs = list()
|
||||
removed_specs = list()
|
||||
for spec in specs:
|
||||
if spec.package.redistribute_binary:
|
||||
remaining_specs.append(spec)
|
||||
else:
|
||||
removed_specs.append(spec)
|
||||
if removed_specs:
|
||||
colified_output = tty.colify.colified(list(s.name for s in removed_specs), indent=4)
|
||||
tty.debug(
|
||||
"The following specs will not be added to the binary cache"
|
||||
" because they cannot be redistributed:\n"
|
||||
f"{colified_output}\n"
|
||||
"You can use `--private` to include them."
|
||||
)
|
||||
return remaining_specs
|
||||
|
||||
|
||||
def push_fn(args):
|
||||
"""create a binary package and push it to a mirror"""
|
||||
if args.spec_file:
|
||||
@@ -403,6 +441,8 @@ def push_fn(args):
|
||||
root="package" in args.things_to_install,
|
||||
dependencies="dependencies" in args.things_to_install,
|
||||
)
|
||||
if not args.private:
|
||||
specs = _skip_no_redistribute_for_public(specs)
|
||||
|
||||
# When pushing multiple specs, print the url once ahead of time, as well as how
|
||||
# many specs are being pushed.
|
||||
@@ -816,10 +856,7 @@ def _config_from_tag(image_ref: ImageReference, tag: str) -> Optional[dict]:
|
||||
|
||||
|
||||
def _update_index_oci(image_ref: ImageReference, tmpdir: str, pool: MaybePool) -> None:
|
||||
request = urllib.request.Request(url=image_ref.tags_url())
|
||||
response = spack.oci.opener.urlopen(request)
|
||||
spack.oci.opener.ensure_status(request, response, 200)
|
||||
tags = json.load(response)["tags"]
|
||||
tags = list_tags(image_ref)
|
||||
|
||||
# Fetch all image config files in parallel
|
||||
spec_dicts = pool.starmap(
|
||||
@@ -1070,7 +1107,17 @@ def sync_fn(args):
|
||||
requires an active environment in order to know which specs to sync
|
||||
"""
|
||||
if args.manifest_glob:
|
||||
manifest_copy(glob.glob(args.manifest_glob))
|
||||
# Passing the args.src_mirror here because it is not possible to
|
||||
# have the destination be required when specifying a named source
|
||||
# mirror and optional for the --manifest-glob argument. In the case
|
||||
# of manifest glob sync, the source mirror positional argument is the
|
||||
# destination mirror if it is specified. If there are two mirrors
|
||||
# specified, the second is ignored and the first is the override
|
||||
# destination.
|
||||
if args.dest_mirror:
|
||||
tty.warn(f"Ignoring unused arguemnt: {args.dest_mirror.name}")
|
||||
|
||||
manifest_copy(glob.glob(args.manifest_glob), args.src_mirror)
|
||||
return 0
|
||||
|
||||
if args.src_mirror is None or args.dest_mirror is None:
|
||||
@@ -1121,7 +1168,7 @@ def sync_fn(args):
|
||||
shutil.rmtree(tmpdir)
|
||||
|
||||
|
||||
def manifest_copy(manifest_file_list):
|
||||
def manifest_copy(manifest_file_list, dest_mirror=None):
|
||||
"""Read manifest files containing information about specific specs to copy
|
||||
from source to destination, remove duplicates since any binary packge for
|
||||
a given hash should be the same as any other, and copy all files specified
|
||||
@@ -1135,10 +1182,17 @@ def manifest_copy(manifest_file_list):
|
||||
# Last duplicate hash wins
|
||||
deduped_manifest[spec_hash] = copy_list
|
||||
|
||||
build_cache_dir = bindist.build_cache_relative_path()
|
||||
for spec_hash, copy_list in deduped_manifest.items():
|
||||
for copy_file in copy_list:
|
||||
tty.debug("copying {0} to {1}".format(copy_file["src"], copy_file["dest"]))
|
||||
copy_buildcache_file(copy_file["src"], copy_file["dest"])
|
||||
dest = copy_file["dest"]
|
||||
if dest_mirror:
|
||||
src_relative_path = os.path.join(
|
||||
build_cache_dir, copy_file["src"].rsplit(build_cache_dir, 1)[1].lstrip("/")
|
||||
)
|
||||
dest = url_util.join(dest_mirror.push_url, src_relative_path)
|
||||
tty.debug("copying {0} to {1}".format(copy_file["src"], dest))
|
||||
copy_buildcache_file(copy_file["src"], dest)
|
||||
|
||||
|
||||
def update_index(mirror: spack.mirror.Mirror, update_keys=False):
|
||||
@@ -1165,14 +1219,18 @@ def update_index(mirror: spack.mirror.Mirror, update_keys=False):
|
||||
url, bindist.build_cache_relative_path(), bindist.build_cache_keys_relative_path()
|
||||
)
|
||||
|
||||
bindist.generate_key_index(keys_url)
|
||||
try:
|
||||
bindist.generate_key_index(keys_url)
|
||||
except bindist.CannotListKeys as e:
|
||||
# Do not error out if listing keys went wrong. This usually means that the _gpg path
|
||||
# does not exist. TODO: distinguish between this and other errors.
|
||||
tty.warn(f"did not update the key index: {e}")
|
||||
|
||||
|
||||
def update_index_fn(args):
|
||||
"""update a buildcache index"""
|
||||
update_index(args.mirror, update_keys=args.keys)
|
||||
return update_index(args.mirror, update_keys=args.keys)
|
||||
|
||||
|
||||
def buildcache(parser, args):
|
||||
if args.func:
|
||||
args.func(args)
|
||||
return args.func(args)
|
||||
|
||||
@@ -14,6 +14,7 @@
|
||||
|
||||
import spack.binary_distribution as bindist
|
||||
import spack.ci as spack_ci
|
||||
import spack.cmd
|
||||
import spack.cmd.buildcache as buildcache
|
||||
import spack.config as cfg
|
||||
import spack.environment as ev
|
||||
@@ -30,14 +31,20 @@
|
||||
level = "long"
|
||||
|
||||
SPACK_COMMAND = "spack"
|
||||
MAKE_COMMAND = "make"
|
||||
INSTALL_FAIL_CODE = 1
|
||||
FAILED_CREATE_BUILDCACHE_CODE = 100
|
||||
|
||||
|
||||
def deindent(desc):
|
||||
return desc.replace(" ", "")
|
||||
|
||||
|
||||
def unicode_escape(path: str) -> str:
|
||||
"""Returns transformed path with any unicode
|
||||
characters replaced with their corresponding escapes"""
|
||||
return path.encode("unicode-escape").decode("utf-8")
|
||||
|
||||
|
||||
def setup_parser(subparser):
|
||||
setup_parser.parser = subparser
|
||||
subparsers = subparser.add_subparsers(help="CI sub-commands")
|
||||
@@ -549,75 +556,35 @@ def ci_rebuild(args):
|
||||
# No hash match anywhere means we need to rebuild spec
|
||||
|
||||
# Start with spack arguments
|
||||
spack_cmd = [SPACK_COMMAND, "--color=always", "--backtrace", "--verbose"]
|
||||
spack_cmd = [SPACK_COMMAND, "--color=always", "--backtrace", "--verbose", "install"]
|
||||
|
||||
config = cfg.get("config")
|
||||
if not config["verify_ssl"]:
|
||||
spack_cmd.append("-k")
|
||||
|
||||
install_args = []
|
||||
install_args = [f'--use-buildcache={spack_ci.win_quote("package:never,dependencies:only")}']
|
||||
|
||||
can_verify = spack_ci.can_verify_binaries()
|
||||
verify_binaries = can_verify and spack_is_pr_pipeline is False
|
||||
if not verify_binaries:
|
||||
install_args.append("--no-check-signature")
|
||||
|
||||
slash_hash = "/{}".format(job_spec.dag_hash())
|
||||
|
||||
# Arguments when installing dependencies from cache
|
||||
deps_install_args = install_args
|
||||
slash_hash = spack_ci.win_quote("/" + job_spec.dag_hash())
|
||||
|
||||
# Arguments when installing the root from sources
|
||||
root_install_args = install_args + [
|
||||
"--keep-stage",
|
||||
"--only=package",
|
||||
"--use-buildcache=package:never,dependencies:only",
|
||||
]
|
||||
deps_install_args = install_args + ["--only=dependencies"]
|
||||
root_install_args = install_args + ["--keep-stage", "--only=package"]
|
||||
|
||||
if cdash_handler:
|
||||
# Add additional arguments to `spack install` for CDash reporting.
|
||||
root_install_args.extend(cdash_handler.args())
|
||||
root_install_args.append(slash_hash)
|
||||
|
||||
# ["x", "y"] -> "'x' 'y'"
|
||||
args_to_string = lambda args: " ".join("'{}'".format(arg) for arg in args)
|
||||
|
||||
commands = [
|
||||
# apparently there's a race when spack bootstraps? do it up front once
|
||||
[SPACK_COMMAND, "-e", env.path, "bootstrap", "now"],
|
||||
[
|
||||
SPACK_COMMAND,
|
||||
"-e",
|
||||
env.path,
|
||||
"env",
|
||||
"depfile",
|
||||
"-o",
|
||||
"Makefile",
|
||||
"--use-buildcache=package:never,dependencies:only",
|
||||
slash_hash, # limit to spec we're building
|
||||
],
|
||||
[
|
||||
# --output-sync requires GNU make 4.x.
|
||||
# Old make errors when you pass it a flag it doesn't recognize,
|
||||
# but it doesn't error or warn when you set unrecognized flags in
|
||||
# this variable.
|
||||
"export",
|
||||
"GNUMAKEFLAGS=--output-sync=recurse",
|
||||
],
|
||||
[
|
||||
MAKE_COMMAND,
|
||||
"SPACK={}".format(args_to_string(spack_cmd)),
|
||||
"SPACK_COLOR=always",
|
||||
"SPACK_INSTALL_FLAGS={}".format(args_to_string(deps_install_args)),
|
||||
"-j$(nproc)",
|
||||
"install-deps/{}".format(
|
||||
spack.environment.depfile.MakefileSpec(job_spec).safe_format(
|
||||
"{name}-{version}-{hash}"
|
||||
)
|
||||
),
|
||||
],
|
||||
spack_cmd + ["install"] + root_install_args,
|
||||
[SPACK_COMMAND, "-e", unicode_escape(env.path), "bootstrap", "now"],
|
||||
spack_cmd + deps_install_args + [slash_hash],
|
||||
spack_cmd + root_install_args + [slash_hash],
|
||||
]
|
||||
|
||||
tty.debug("Installing {0} from source".format(job_spec.name))
|
||||
install_exit_code = spack_ci.process_command("install", commands, repro_dir)
|
||||
|
||||
@@ -705,11 +672,9 @@ def ci_rebuild(args):
|
||||
cdash_handler.report_skipped(job_spec, reports_dir, reason=msg)
|
||||
cdash_handler.copy_test_results(reports_dir, job_test_dir)
|
||||
|
||||
# If the install succeeded, create a buildcache entry for this job spec
|
||||
# and push it to one or more mirrors. If the install did not succeed,
|
||||
# print out some instructions on how to reproduce this build failure
|
||||
# outside of the pipeline environment.
|
||||
if install_exit_code == 0:
|
||||
# If the install succeeded, push it to one or more mirrors. Failure to push to any mirror
|
||||
# will result in a non-zero exit code. Pushing is best-effort.
|
||||
mirror_urls = [buildcache_mirror_url]
|
||||
|
||||
# TODO: Remove this block in Spack 0.23
|
||||
@@ -721,13 +686,12 @@ def ci_rebuild(args):
|
||||
destination_mirror_urls=mirror_urls,
|
||||
sign_binaries=spack_ci.can_sign_binaries(),
|
||||
):
|
||||
msg = tty.msg if result.success else tty.warn
|
||||
msg(
|
||||
"{} {} to {}".format(
|
||||
"Pushed" if result.success else "Failed to push",
|
||||
job_spec.format("{name}{@version}{/hash:7}", color=clr.get_color_when()),
|
||||
result.url,
|
||||
)
|
||||
if not result.success:
|
||||
install_exit_code = FAILED_CREATE_BUILDCACHE_CODE
|
||||
(tty.msg if result.success else tty.error)(
|
||||
f'{"Pushed" if result.success else "Failed to push"} '
|
||||
f'{job_spec.format("{name}{@version}{/hash:7}", color=clr.get_color_when())} '
|
||||
f"to {result.url}"
|
||||
)
|
||||
|
||||
# If this is a develop pipeline, check if the spec that we just built is
|
||||
@@ -748,22 +712,22 @@ def ci_rebuild(args):
|
||||
tty.warn(msg.format(broken_spec_path, err))
|
||||
|
||||
else:
|
||||
# If the install did not succeed, print out some instructions on how to reproduce this
|
||||
# build failure outside of the pipeline environment.
|
||||
tty.debug("spack install exited non-zero, will not create buildcache")
|
||||
|
||||
api_root_url = os.environ.get("CI_API_V4_URL")
|
||||
ci_project_id = os.environ.get("CI_PROJECT_ID")
|
||||
ci_job_id = os.environ.get("CI_JOB_ID")
|
||||
|
||||
repro_job_url = "{0}/projects/{1}/jobs/{2}/artifacts".format(
|
||||
api_root_url, ci_project_id, ci_job_id
|
||||
)
|
||||
|
||||
repro_job_url = f"{api_root_url}/projects/{ci_project_id}/jobs/{ci_job_id}/artifacts"
|
||||
# Control characters cause this to be printed in blue so it stands out
|
||||
reproduce_msg = """
|
||||
print(
|
||||
f"""
|
||||
|
||||
\033[34mTo reproduce this build locally, run:
|
||||
|
||||
spack ci reproduce-build {0} [--working-dir <dir>] [--autostart]
|
||||
spack ci reproduce-build {repro_job_url} [--working-dir <dir>] [--autostart]
|
||||
|
||||
If this project does not have public pipelines, you will need to first:
|
||||
|
||||
@@ -771,12 +735,9 @@ def ci_rebuild(args):
|
||||
|
||||
... then follow the printed instructions.\033[0;0m
|
||||
|
||||
""".format(
|
||||
repro_job_url
|
||||
"""
|
||||
)
|
||||
|
||||
print(reproduce_msg)
|
||||
|
||||
rebuild_timer.stop()
|
||||
try:
|
||||
with open("install_timers.json", "w") as timelog:
|
||||
|
||||
@@ -563,12 +563,13 @@ def add_concretizer_args(subparser):
|
||||
help="reuse installed packages/buildcaches when possible",
|
||||
)
|
||||
subgroup.add_argument(
|
||||
"--fresh-roots",
|
||||
"--reuse-deps",
|
||||
action=ConfigSetAction,
|
||||
dest="concretizer:reuse",
|
||||
const="dependencies",
|
||||
default=None,
|
||||
help="reuse installed dependencies only",
|
||||
help="concretize with fresh roots and reused dependencies",
|
||||
)
|
||||
subgroup.add_argument(
|
||||
"--deprecated",
|
||||
|
||||
@@ -9,13 +9,14 @@
|
||||
import shutil
|
||||
import sys
|
||||
import tempfile
|
||||
from typing import Optional
|
||||
from pathlib import Path
|
||||
from typing import List, Optional
|
||||
|
||||
import llnl.string as string
|
||||
import llnl.util.filesystem as fs
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.tty.colify import colify
|
||||
from llnl.util.tty.color import colorize
|
||||
from llnl.util.tty.color import cescape, colorize
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common
|
||||
@@ -44,6 +45,7 @@
|
||||
"deactivate",
|
||||
"create",
|
||||
["remove", "rm"],
|
||||
["rename", "mv"],
|
||||
["list", "ls"],
|
||||
["status", "st"],
|
||||
"loads",
|
||||
@@ -59,14 +61,7 @@
|
||||
#
|
||||
def env_create_setup_parser(subparser):
|
||||
"""create a new environment"""
|
||||
subparser.add_argument(
|
||||
"env_name",
|
||||
metavar="env",
|
||||
help=(
|
||||
"name of managed environment or directory of the anonymous env "
|
||||
"(when using --dir/-d) to activate"
|
||||
),
|
||||
)
|
||||
subparser.add_argument("env_name", metavar="env", help="name or directory of environment")
|
||||
subparser.add_argument(
|
||||
"-d", "--dir", action="store_true", help="create an environment in a specific directory"
|
||||
)
|
||||
@@ -92,6 +87,9 @@ def env_create_setup_parser(subparser):
|
||||
default=None,
|
||||
help="either a lockfile (must end with '.json' or '.lock') or a manifest file",
|
||||
)
|
||||
subparser.add_argument(
|
||||
"--include-concrete", action="append", help="name of old environment to copy specs from"
|
||||
)
|
||||
|
||||
|
||||
def env_create(args):
|
||||
@@ -109,19 +107,32 @@ def env_create(args):
|
||||
# the environment should not include a view.
|
||||
with_view = None
|
||||
|
||||
include_concrete = None
|
||||
if hasattr(args, "include_concrete"):
|
||||
include_concrete = args.include_concrete
|
||||
|
||||
env = _env_create(
|
||||
args.env_name,
|
||||
init_file=args.envfile,
|
||||
dir=args.dir,
|
||||
dir=args.dir or os.path.sep in args.env_name or args.env_name in (".", ".."),
|
||||
with_view=with_view,
|
||||
keep_relative=args.keep_relative,
|
||||
include_concrete=include_concrete,
|
||||
)
|
||||
|
||||
# Generate views, only really useful for environments created from spack.lock files.
|
||||
env.regenerate_views()
|
||||
|
||||
|
||||
def _env_create(name_or_path, *, init_file=None, dir=False, with_view=None, keep_relative=False):
|
||||
def _env_create(
|
||||
name_or_path: str,
|
||||
*,
|
||||
init_file: Optional[str] = None,
|
||||
dir: bool = False,
|
||||
with_view: Optional[str] = None,
|
||||
keep_relative: bool = False,
|
||||
include_concrete: Optional[List[str]] = None,
|
||||
):
|
||||
"""Create a new environment, with an optional yaml description.
|
||||
|
||||
Arguments:
|
||||
@@ -133,22 +144,31 @@ def _env_create(name_or_path, *, init_file=None, dir=False, with_view=None, keep
|
||||
keep_relative (bool): if True, develop paths are copied verbatim into
|
||||
the new environment file, otherwise they may be made absolute if the
|
||||
new environment is in a different location
|
||||
include_concrete (list): list of the included concrete environments
|
||||
"""
|
||||
if not dir:
|
||||
env = ev.create(
|
||||
name_or_path, init_file=init_file, with_view=with_view, keep_relative=keep_relative
|
||||
name_or_path,
|
||||
init_file=init_file,
|
||||
with_view=with_view,
|
||||
keep_relative=keep_relative,
|
||||
include_concrete=include_concrete,
|
||||
)
|
||||
tty.msg("Created environment '%s' in %s" % (name_or_path, env.path))
|
||||
tty.msg("You can activate this environment with:")
|
||||
tty.msg(" spack env activate %s" % (name_or_path))
|
||||
return env
|
||||
|
||||
env = ev.create_in_dir(
|
||||
name_or_path, init_file=init_file, with_view=with_view, keep_relative=keep_relative
|
||||
)
|
||||
tty.msg("Created environment in %s" % env.path)
|
||||
tty.msg("You can activate this environment with:")
|
||||
tty.msg(" spack env activate %s" % env.path)
|
||||
tty.msg(
|
||||
colorize(
|
||||
f"Created environment @c{{{cescape(name_or_path)}}} in: @c{{{cescape(env.path)}}}"
|
||||
)
|
||||
)
|
||||
else:
|
||||
env = ev.create_in_dir(
|
||||
name_or_path,
|
||||
init_file=init_file,
|
||||
with_view=with_view,
|
||||
keep_relative=keep_relative,
|
||||
include_concrete=include_concrete,
|
||||
)
|
||||
tty.msg(colorize(f"Created independent environment in: @c{{{cescape(env.path)}}}"))
|
||||
tty.msg(f"Activate with: {colorize(f'@c{{spack env activate {cescape(name_or_path)}}}')}")
|
||||
return env
|
||||
|
||||
|
||||
@@ -434,6 +454,12 @@ def env_remove_setup_parser(subparser):
|
||||
"""remove an existing environment"""
|
||||
subparser.add_argument("rm_env", metavar="env", nargs="+", help="environment(s) to remove")
|
||||
arguments.add_common_arguments(subparser, ["yes_to_all"])
|
||||
subparser.add_argument(
|
||||
"-f",
|
||||
"--force",
|
||||
action="store_true",
|
||||
help="remove the environment even if it is included in another environment",
|
||||
)
|
||||
|
||||
|
||||
def env_remove(args):
|
||||
@@ -443,13 +469,35 @@ def env_remove(args):
|
||||
and manifests embedded in repositories should be removed manually.
|
||||
"""
|
||||
read_envs = []
|
||||
valid_envs = []
|
||||
bad_envs = []
|
||||
for env_name in args.rm_env:
|
||||
invalid_envs = []
|
||||
|
||||
for env_name in ev.all_environment_names():
|
||||
try:
|
||||
env = ev.read(env_name)
|
||||
read_envs.append(env)
|
||||
valid_envs.append(env_name)
|
||||
|
||||
if env_name in args.rm_env:
|
||||
read_envs.append(env)
|
||||
except (spack.config.ConfigFormatError, ev.SpackEnvironmentConfigError):
|
||||
bad_envs.append(env_name)
|
||||
invalid_envs.append(env_name)
|
||||
|
||||
if env_name in args.rm_env:
|
||||
bad_envs.append(env_name)
|
||||
|
||||
# Check if env is linked to another before trying to remove
|
||||
for name in valid_envs:
|
||||
# don't check if environment is included to itself
|
||||
if name == env_name:
|
||||
continue
|
||||
environ = ev.Environment(ev.root(name))
|
||||
if ev.root(env_name) in environ.included_concrete_envs:
|
||||
msg = f'Environment "{env_name}" is being used by environment "{name}"'
|
||||
if args.force:
|
||||
tty.warn(msg)
|
||||
else:
|
||||
tty.die(msg)
|
||||
|
||||
if not args.yes_to_all:
|
||||
environments = string.plural(len(args.rm_env), "environment", show_n=False)
|
||||
@@ -472,11 +520,82 @@ def env_remove(args):
|
||||
tty.msg(f"Successfully removed environment '{bad_env_name}'")
|
||||
|
||||
|
||||
#
|
||||
# env rename
|
||||
#
|
||||
def env_rename_setup_parser(subparser):
|
||||
"""rename an existing environment"""
|
||||
subparser.add_argument(
|
||||
"mv_from", metavar="from", help="name (or path) of existing environment"
|
||||
)
|
||||
subparser.add_argument(
|
||||
"mv_to", metavar="to", help="new name (or path) for existing environment"
|
||||
)
|
||||
subparser.add_argument(
|
||||
"-d",
|
||||
"--dir",
|
||||
action="store_true",
|
||||
help="the specified arguments correspond to directory paths",
|
||||
)
|
||||
subparser.add_argument(
|
||||
"-f", "--force", action="store_true", help="allow overwriting of an existing environment"
|
||||
)
|
||||
|
||||
|
||||
def env_rename(args):
|
||||
"""Rename an environment.
|
||||
|
||||
This renames a managed environment or moves an anonymous environment.
|
||||
"""
|
||||
|
||||
# Directory option has been specified
|
||||
if args.dir:
|
||||
if not ev.is_env_dir(args.mv_from):
|
||||
tty.die("The specified path does not correspond to a valid spack environment")
|
||||
from_path = Path(args.mv_from)
|
||||
if not args.force:
|
||||
if ev.is_env_dir(args.mv_to):
|
||||
tty.die(
|
||||
"The new path corresponds to an existing environment;"
|
||||
" specify the --force flag to overwrite it."
|
||||
)
|
||||
if Path(args.mv_to).exists():
|
||||
tty.die("The new path already exists; specify the --force flag to overwrite it.")
|
||||
to_path = Path(args.mv_to)
|
||||
|
||||
# Name option being used
|
||||
elif ev.exists(args.mv_from):
|
||||
from_path = ev.environment.environment_dir_from_name(args.mv_from)
|
||||
if not args.force and ev.exists(args.mv_to):
|
||||
tty.die(
|
||||
"The new name corresponds to an existing environment;"
|
||||
" specify the --force flag to overwrite it."
|
||||
)
|
||||
to_path = ev.environment.root(args.mv_to)
|
||||
|
||||
# Neither
|
||||
else:
|
||||
tty.die("The specified name does not correspond to a managed spack environment")
|
||||
|
||||
# Guard against renaming from or to an active environment
|
||||
active_env = ev.active_environment()
|
||||
if active_env:
|
||||
from_env = ev.Environment(from_path)
|
||||
if from_env.path == active_env.path:
|
||||
tty.die("Cannot rename active environment")
|
||||
if to_path == active_env.path:
|
||||
tty.die(f"{args.mv_to} is an active environment")
|
||||
|
||||
shutil.rmtree(to_path, ignore_errors=True)
|
||||
fs.rename(from_path, to_path)
|
||||
tty.msg(f"Successfully renamed environment {args.mv_from} to {args.mv_to}")
|
||||
|
||||
|
||||
#
|
||||
# env list
|
||||
#
|
||||
def env_list_setup_parser(subparser):
|
||||
"""list available environments"""
|
||||
"""list managed environments"""
|
||||
|
||||
|
||||
def env_list(args):
|
||||
|
||||
@@ -14,6 +14,7 @@
|
||||
import spack.cmd as cmd
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
from spack.database import InstallStatuses
|
||||
|
||||
@@ -69,6 +70,12 @@ def setup_parser(subparser):
|
||||
|
||||
arguments.add_common_arguments(subparser, ["long", "very_long", "tags", "namespaces"])
|
||||
|
||||
subparser.add_argument(
|
||||
"-r",
|
||||
"--only-roots",
|
||||
action="store_true",
|
||||
help="don't show full list of installed specs in an environment",
|
||||
)
|
||||
subparser.add_argument(
|
||||
"-c",
|
||||
"--show-concretized",
|
||||
@@ -140,6 +147,12 @@ def setup_parser(subparser):
|
||||
subparser.add_argument(
|
||||
"--only-deprecated", action="store_true", help="show only deprecated packages"
|
||||
)
|
||||
subparser.add_argument(
|
||||
"--install-tree",
|
||||
action="store",
|
||||
default="all",
|
||||
help="Install trees to query: 'all' (default), 'local', 'upstream', upstream name or path",
|
||||
)
|
||||
|
||||
subparser.add_argument("--start-date", help="earliest date of installation [YYYY-MM-DD]")
|
||||
subparser.add_argument("--end-date", help="latest date of installation [YYYY-MM-DD]")
|
||||
@@ -168,6 +181,12 @@ def query_arguments(args):
|
||||
|
||||
q_args = {"installed": installed, "known": known, "explicit": explicit}
|
||||
|
||||
install_tree = args.install_tree
|
||||
upstreams = spack.config.get("upstreams", {})
|
||||
if install_tree in upstreams.keys():
|
||||
install_tree = upstreams[install_tree]["install_tree"]
|
||||
q_args["install_tree"] = install_tree
|
||||
|
||||
# Time window of installation
|
||||
for attribute in ("start_date", "end_date"):
|
||||
date = getattr(args, attribute)
|
||||
@@ -177,26 +196,22 @@ def query_arguments(args):
|
||||
return q_args
|
||||
|
||||
|
||||
def setup_env(env):
|
||||
def make_env_decorator(env):
|
||||
"""Create a function for decorating specs when in an environment."""
|
||||
|
||||
def strip_build(seq):
|
||||
return set(s.copy(deps=("link", "run")) for s in seq)
|
||||
|
||||
added = set(strip_build(env.added_specs()))
|
||||
roots = set(strip_build(env.roots()))
|
||||
removed = set(strip_build(env.removed_specs()))
|
||||
roots = set(env.roots())
|
||||
removed = set(env.removed_specs())
|
||||
|
||||
def decorator(spec, fmt):
|
||||
# add +/-/* to show added/removed/root specs
|
||||
if any(spec.dag_hash() == r.dag_hash() for r in roots):
|
||||
return color.colorize("@*{%s}" % fmt)
|
||||
return color.colorize(f"@*{{{fmt}}}")
|
||||
elif spec in removed:
|
||||
return color.colorize("@K{%s}" % fmt)
|
||||
return color.colorize(f"@K{{{fmt}}}")
|
||||
else:
|
||||
return "%s" % fmt
|
||||
return fmt
|
||||
|
||||
return decorator, added, roots, removed
|
||||
return decorator
|
||||
|
||||
|
||||
def display_env(env, args, decorator, results):
|
||||
@@ -211,10 +226,54 @@ def display_env(env, args, decorator, results):
|
||||
"""
|
||||
tty.msg("In environment %s" % env.name)
|
||||
|
||||
if not env.user_specs:
|
||||
tty.msg("No root specs")
|
||||
else:
|
||||
tty.msg("Root specs")
|
||||
num_roots = len(env.user_specs) or "No"
|
||||
tty.msg(f"{num_roots} root specs")
|
||||
|
||||
concrete_specs = {
|
||||
root: concrete_root
|
||||
for root, concrete_root in zip(env.concretized_user_specs, env.concrete_roots())
|
||||
}
|
||||
|
||||
def root_decorator(spec, string):
|
||||
"""Decorate root specs with their install status if needed"""
|
||||
concrete = concrete_specs.get(spec)
|
||||
if concrete:
|
||||
status = color.colorize(concrete.install_status().value)
|
||||
hash = concrete.dag_hash()
|
||||
else:
|
||||
status = color.colorize(spack.spec.InstallStatus.absent.value)
|
||||
hash = "-" * 32
|
||||
|
||||
# TODO: status has two extra spaces on the end of it, but fixing this and other spec
|
||||
# TODO: space format idiosyncrasies is complicated. Fix this eventually
|
||||
status = status[:-2]
|
||||
|
||||
if args.long or args.very_long:
|
||||
hash = color.colorize(f"@K{{{hash[: 7 if args.long else None]}}}")
|
||||
return f"{status} {hash} {string}"
|
||||
else:
|
||||
return f"{status} {string}"
|
||||
|
||||
with spack.store.STORE.db.read_transaction():
|
||||
cmd.display_specs(
|
||||
env.user_specs,
|
||||
args,
|
||||
# these are overrides of CLI args
|
||||
paths=False,
|
||||
long=False,
|
||||
very_long=False,
|
||||
# these enforce details in the root specs to show what the user asked for
|
||||
namespaces=True,
|
||||
show_flags=True,
|
||||
show_full_compiler=True,
|
||||
decorator=root_decorator,
|
||||
variants=True,
|
||||
)
|
||||
|
||||
print()
|
||||
|
||||
if env.included_concrete_envs:
|
||||
tty.msg("Included specs")
|
||||
|
||||
# Root specs cannot be displayed with prefixes, since those are not
|
||||
# set for abstract specs. Same for hashes
|
||||
@@ -224,10 +283,10 @@ def display_env(env, args, decorator, results):
|
||||
# Roots are displayed with variants, etc. so that we can see
|
||||
# specifically what the user asked for.
|
||||
cmd.display_specs(
|
||||
env.user_specs,
|
||||
env.included_user_specs,
|
||||
root_args,
|
||||
decorator=lambda s, f: color.colorize("@*{%s}" % f),
|
||||
namespaces=True,
|
||||
namespace=True,
|
||||
show_flags=True,
|
||||
show_full_compiler=True,
|
||||
variants=True,
|
||||
@@ -242,7 +301,7 @@ def display_env(env, args, decorator, results):
|
||||
# Display a header for the installed packages section IF there are installed
|
||||
# packages. If there aren't any, we'll just end up printing "0 installed packages"
|
||||
# later.
|
||||
if results:
|
||||
if results and not args.only_roots:
|
||||
tty.msg("Installed packages")
|
||||
|
||||
|
||||
@@ -251,9 +310,10 @@ def find(parser, args):
|
||||
results = args.specs(**q_args)
|
||||
|
||||
env = ev.active_environment()
|
||||
decorator = lambda s, f: f
|
||||
if env:
|
||||
decorator, _, roots, _ = setup_env(env)
|
||||
if not env and args.only_roots:
|
||||
tty.die("-r / --only-roots requires an active environment")
|
||||
|
||||
decorator = make_env_decorator(env) if env else lambda s, f: f
|
||||
|
||||
# use groups by default except with format.
|
||||
if args.groups is None:
|
||||
@@ -280,9 +340,12 @@ def find(parser, args):
|
||||
if env:
|
||||
display_env(env, args, decorator, results)
|
||||
|
||||
cmd.display_specs(results, args, decorator=decorator, all_headers=True)
|
||||
count_suffix = " (not shown)"
|
||||
if not args.only_roots:
|
||||
cmd.display_specs(results, args, decorator=decorator, all_headers=True)
|
||||
count_suffix = ""
|
||||
|
||||
# print number of installed packages last (as the list may be long)
|
||||
if sys.stdout.isatty() and args.groups:
|
||||
pkg_type = "loaded" if args.loaded else "installed"
|
||||
spack.cmd.print_how_many_pkgs(results, pkg_type)
|
||||
spack.cmd.print_how_many_pkgs(results, pkg_type, suffix=count_suffix)
|
||||
|
||||
@@ -263,8 +263,8 @@ def _fmt_name_and_default(variant):
|
||||
return color.colorize(f"@c{{{variant.name}}} @C{{[{_fmt_value(variant.default)}]}}")
|
||||
|
||||
|
||||
def _fmt_when(when, indent):
|
||||
return color.colorize(f"{indent * ' '}@B{{when}} {color.cescape(when)}")
|
||||
def _fmt_when(when: "spack.spec.Spec", indent: int):
|
||||
return color.colorize(f"{indent * ' '}@B{{when}} {color.cescape(str(when))}")
|
||||
|
||||
|
||||
def _fmt_variant_description(variant, width, indent):
|
||||
@@ -441,7 +441,7 @@ def get_url(version):
|
||||
return "No URL"
|
||||
|
||||
url = get_url(preferred) if pkg.has_code else ""
|
||||
line = version(" {0}".format(pad(preferred))) + color.cescape(url)
|
||||
line = version(" {0}".format(pad(preferred))) + color.cescape(str(url))
|
||||
color.cwrite(line)
|
||||
|
||||
print()
|
||||
@@ -464,7 +464,7 @@ def get_url(version):
|
||||
continue
|
||||
|
||||
for v, url in vers:
|
||||
line = version(" {0}".format(pad(v))) + color.cescape(url)
|
||||
line = version(" {0}".format(pad(v))) + color.cescape(str(url))
|
||||
color.cprint(line)
|
||||
|
||||
|
||||
@@ -475,10 +475,7 @@ def print_virtuals(pkg, args):
|
||||
color.cprint(section_title("Virtual Packages: "))
|
||||
if pkg.provided:
|
||||
for when, specs in reversed(sorted(pkg.provided.items())):
|
||||
line = " %s provides %s" % (
|
||||
when.colorized(),
|
||||
", ".join(s.colorized() for s in specs),
|
||||
)
|
||||
line = " %s provides %s" % (when.cformat(), ", ".join(s.cformat() for s in specs))
|
||||
print(line)
|
||||
|
||||
else:
|
||||
@@ -497,7 +494,9 @@ def print_licenses(pkg, args):
|
||||
pad = padder(pkg.licenses, 4)
|
||||
for when_spec in pkg.licenses:
|
||||
license_identifier = pkg.licenses[when_spec]
|
||||
line = license(" {0}".format(pad(license_identifier))) + color.cescape(when_spec)
|
||||
line = license(" {0}".format(pad(license_identifier))) + color.cescape(
|
||||
str(when_spec)
|
||||
)
|
||||
color.cprint(line)
|
||||
|
||||
|
||||
|
||||
@@ -420,10 +420,9 @@ def install_with_active_env(env: ev.Environment, args, install_kwargs, reporter_
|
||||
with reporter_factory(specs_to_install):
|
||||
env.install_specs(specs_to_install, **install_kwargs)
|
||||
finally:
|
||||
# TODO: this is doing way too much to trigger
|
||||
# views and modules to be generated.
|
||||
with env.write_transaction():
|
||||
env.write(regenerate=True)
|
||||
if env.views:
|
||||
with env.write_transaction():
|
||||
env.write(regenerate=True)
|
||||
|
||||
|
||||
def concrete_specs_from_cli(args, install_kwargs):
|
||||
|
||||
@@ -5,8 +5,6 @@
|
||||
|
||||
import sys
|
||||
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.find
|
||||
import spack.environment as ev
|
||||
@@ -70,16 +68,6 @@ def setup_parser(subparser):
|
||||
help="load the first match if multiple packages match the spec",
|
||||
)
|
||||
|
||||
subparser.add_argument(
|
||||
"--only",
|
||||
default="package,dependencies",
|
||||
dest="things_to_load",
|
||||
choices=["package", "dependencies"],
|
||||
help="select whether to load the package and its dependencies\n\n"
|
||||
"the default is to load the package and all dependencies. alternatively, "
|
||||
"one can decide to load only the package or only the dependencies",
|
||||
)
|
||||
|
||||
subparser.add_argument(
|
||||
"--list",
|
||||
action="store_true",
|
||||
@@ -110,11 +98,6 @@ def load(parser, args):
|
||||
)
|
||||
return 1
|
||||
|
||||
if args.things_to_load != "package,dependencies":
|
||||
tty.warn(
|
||||
"The `--only` flag in spack load is deprecated and will be removed in Spack v0.22"
|
||||
)
|
||||
|
||||
with spack.store.STORE.db.read_transaction():
|
||||
env_mod = uenv.environment_modifications_for_specs(*specs)
|
||||
for spec in specs:
|
||||
|
||||
@@ -71,6 +71,11 @@ def setup_parser(subparser):
|
||||
help="the number of versions to fetch for each spec, choose 'all' to"
|
||||
" retrieve all versions of each package",
|
||||
)
|
||||
create_parser.add_argument(
|
||||
"--private",
|
||||
action="store_true",
|
||||
help="for a private mirror, include non-redistributable packages",
|
||||
)
|
||||
arguments.add_common_arguments(create_parser, ["specs"])
|
||||
arguments.add_concretizer_args(create_parser)
|
||||
|
||||
@@ -108,6 +113,11 @@ def setup_parser(subparser):
|
||||
"and source use `--type binary --type source` (default)"
|
||||
),
|
||||
)
|
||||
add_parser.add_argument(
|
||||
"--autopush",
|
||||
action="store_true",
|
||||
help=("set mirror to push automatically after installation"),
|
||||
)
|
||||
add_parser_signed = add_parser.add_mutually_exclusive_group(required=False)
|
||||
add_parser_signed.add_argument(
|
||||
"--unsigned",
|
||||
@@ -175,6 +185,21 @@ def setup_parser(subparser):
|
||||
),
|
||||
)
|
||||
set_parser.add_argument("--url", help="url of mirror directory from 'spack mirror create'")
|
||||
set_parser_autopush = set_parser.add_mutually_exclusive_group(required=False)
|
||||
set_parser_autopush.add_argument(
|
||||
"--autopush",
|
||||
help="set mirror to push automatically after installation",
|
||||
action="store_true",
|
||||
default=None,
|
||||
dest="autopush",
|
||||
)
|
||||
set_parser_autopush.add_argument(
|
||||
"--no-autopush",
|
||||
help="set mirror to not push automatically after installation",
|
||||
action="store_false",
|
||||
default=None,
|
||||
dest="autopush",
|
||||
)
|
||||
set_parser_unsigned = set_parser.add_mutually_exclusive_group(required=False)
|
||||
set_parser_unsigned.add_argument(
|
||||
"--unsigned",
|
||||
@@ -218,6 +243,7 @@ def mirror_add(args):
|
||||
or args.type
|
||||
or args.oci_username
|
||||
or args.oci_password
|
||||
or args.autopush
|
||||
or args.signed is not None
|
||||
):
|
||||
connection = {"url": args.url}
|
||||
@@ -234,6 +260,8 @@ def mirror_add(args):
|
||||
if args.type:
|
||||
connection["binary"] = "binary" in args.type
|
||||
connection["source"] = "source" in args.type
|
||||
if args.autopush:
|
||||
connection["autopush"] = args.autopush
|
||||
if args.signed is not None:
|
||||
connection["signed"] = args.signed
|
||||
mirror = spack.mirror.Mirror(connection, name=args.name)
|
||||
@@ -270,6 +298,8 @@ def _configure_mirror(args):
|
||||
changes["access_pair"] = [args.oci_username, args.oci_password]
|
||||
if getattr(args, "signed", None) is not None:
|
||||
changes["signed"] = args.signed
|
||||
if getattr(args, "autopush", None) is not None:
|
||||
changes["autopush"] = args.autopush
|
||||
|
||||
# argparse cannot distinguish between --binary and --no-binary when same dest :(
|
||||
# notice that set-url does not have these args, so getattr
|
||||
@@ -334,7 +364,6 @@ def concrete_specs_from_user(args):
|
||||
specs = filter_externals(specs)
|
||||
specs = list(set(specs))
|
||||
specs.sort(key=lambda s: (s.name, s.version))
|
||||
specs, _ = lang.stable_partition(specs, predicate_fn=not_excluded_fn(args))
|
||||
return specs
|
||||
|
||||
|
||||
@@ -379,36 +408,50 @@ def concrete_specs_from_cli_or_file(args):
|
||||
return specs
|
||||
|
||||
|
||||
def not_excluded_fn(args):
|
||||
"""Return a predicate that evaluate to True if a spec was not explicitly
|
||||
excluded by the user.
|
||||
"""
|
||||
exclude_specs = []
|
||||
if args.exclude_file:
|
||||
exclude_specs.extend(specs_from_text_file(args.exclude_file, concretize=False))
|
||||
if args.exclude_specs:
|
||||
exclude_specs.extend(spack.cmd.parse_specs(str(args.exclude_specs).split()))
|
||||
class IncludeFilter:
|
||||
def __init__(self, args):
|
||||
self.exclude_specs = []
|
||||
if args.exclude_file:
|
||||
self.exclude_specs.extend(specs_from_text_file(args.exclude_file, concretize=False))
|
||||
if args.exclude_specs:
|
||||
self.exclude_specs.extend(spack.cmd.parse_specs(str(args.exclude_specs).split()))
|
||||
self.private = args.private
|
||||
|
||||
def not_excluded(x):
|
||||
return not any(x.satisfies(y) for y in exclude_specs)
|
||||
def __call__(self, x):
|
||||
return all([self._not_license_excluded(x), self._not_cmdline_excluded(x)])
|
||||
|
||||
return not_excluded
|
||||
def _not_license_excluded(self, x):
|
||||
"""True if the spec is for a private mirror, or as long as the
|
||||
package does not explicitly forbid redistributing source."""
|
||||
if self.private:
|
||||
return True
|
||||
elif x.package_class.redistribute_source(x):
|
||||
return True
|
||||
else:
|
||||
tty.debug(
|
||||
"Skip adding {0} to mirror: the package.py file"
|
||||
" indicates that a public mirror should not contain"
|
||||
" it.".format(x.name)
|
||||
)
|
||||
return False
|
||||
|
||||
def _not_cmdline_excluded(self, x):
|
||||
"""True if a spec was not explicitly excluded by the user."""
|
||||
return not any(x.satisfies(y) for y in self.exclude_specs)
|
||||
|
||||
|
||||
def concrete_specs_from_environment(selection_fn):
|
||||
def concrete_specs_from_environment():
|
||||
env = ev.active_environment()
|
||||
assert env, "an active environment is required"
|
||||
mirror_specs = env.all_specs()
|
||||
mirror_specs = filter_externals(mirror_specs)
|
||||
mirror_specs, _ = lang.stable_partition(mirror_specs, predicate_fn=selection_fn)
|
||||
return mirror_specs
|
||||
|
||||
|
||||
def all_specs_with_all_versions(selection_fn):
|
||||
def all_specs_with_all_versions():
|
||||
specs = [spack.spec.Spec(n) for n in spack.repo.all_package_names()]
|
||||
mirror_specs = spack.mirror.get_all_versions(specs)
|
||||
mirror_specs.sort(key=lambda s: (s.name, s.version))
|
||||
mirror_specs, _ = lang.stable_partition(mirror_specs, predicate_fn=selection_fn)
|
||||
return mirror_specs
|
||||
|
||||
|
||||
@@ -429,12 +472,6 @@ def versions_per_spec(args):
|
||||
return num_versions
|
||||
|
||||
|
||||
def create_mirror_for_individual_specs(mirror_specs, path, skip_unstable_versions):
|
||||
present, mirrored, error = spack.mirror.create(path, mirror_specs, skip_unstable_versions)
|
||||
tty.msg("Summary for mirror in {}".format(path))
|
||||
process_mirror_stats(present, mirrored, error)
|
||||
|
||||
|
||||
def process_mirror_stats(present, mirrored, error):
|
||||
p, m, e = len(present), len(mirrored), len(error)
|
||||
tty.msg(
|
||||
@@ -480,30 +517,28 @@ def mirror_create(args):
|
||||
# When no directory is provided, the source dir is used
|
||||
path = args.directory or spack.caches.fetch_cache_location()
|
||||
|
||||
mirror_specs, mirror_fn = _specs_and_action(args)
|
||||
mirror_fn(mirror_specs, path=path, skip_unstable_versions=args.skip_unstable_versions)
|
||||
|
||||
|
||||
def _specs_and_action(args):
|
||||
include_fn = IncludeFilter(args)
|
||||
|
||||
if args.all and not ev.active_environment():
|
||||
create_mirror_for_all_specs(
|
||||
path=path,
|
||||
skip_unstable_versions=args.skip_unstable_versions,
|
||||
selection_fn=not_excluded_fn(args),
|
||||
)
|
||||
return
|
||||
mirror_specs = all_specs_with_all_versions()
|
||||
mirror_fn = create_mirror_for_all_specs
|
||||
elif args.all and ev.active_environment():
|
||||
mirror_specs = concrete_specs_from_environment()
|
||||
mirror_fn = create_mirror_for_individual_specs
|
||||
else:
|
||||
mirror_specs = concrete_specs_from_user(args)
|
||||
mirror_fn = create_mirror_for_individual_specs
|
||||
|
||||
if args.all and ev.active_environment():
|
||||
create_mirror_for_all_specs_inside_environment(
|
||||
path=path,
|
||||
skip_unstable_versions=args.skip_unstable_versions,
|
||||
selection_fn=not_excluded_fn(args),
|
||||
)
|
||||
return
|
||||
|
||||
mirror_specs = concrete_specs_from_user(args)
|
||||
create_mirror_for_individual_specs(
|
||||
mirror_specs, path=path, skip_unstable_versions=args.skip_unstable_versions
|
||||
)
|
||||
mirror_specs, _ = lang.stable_partition(mirror_specs, predicate_fn=include_fn)
|
||||
return mirror_specs, mirror_fn
|
||||
|
||||
|
||||
def create_mirror_for_all_specs(path, skip_unstable_versions, selection_fn):
|
||||
mirror_specs = all_specs_with_all_versions(selection_fn=selection_fn)
|
||||
def create_mirror_for_all_specs(mirror_specs, path, skip_unstable_versions):
|
||||
mirror_cache, mirror_stats = spack.mirror.mirror_cache_and_stats(
|
||||
path, skip_unstable_versions=skip_unstable_versions
|
||||
)
|
||||
@@ -515,11 +550,10 @@ def create_mirror_for_all_specs(path, skip_unstable_versions, selection_fn):
|
||||
process_mirror_stats(*mirror_stats.stats())
|
||||
|
||||
|
||||
def create_mirror_for_all_specs_inside_environment(path, skip_unstable_versions, selection_fn):
|
||||
mirror_specs = concrete_specs_from_environment(selection_fn=selection_fn)
|
||||
create_mirror_for_individual_specs(
|
||||
mirror_specs, path=path, skip_unstable_versions=skip_unstable_versions
|
||||
)
|
||||
def create_mirror_for_individual_specs(mirror_specs, path, skip_unstable_versions):
|
||||
present, mirrored, error = spack.mirror.create(path, mirror_specs, skip_unstable_versions)
|
||||
tty.msg("Summary for mirror in {}".format(path))
|
||||
process_mirror_stats(present, mirrored, error)
|
||||
|
||||
|
||||
def mirror_destroy(args):
|
||||
|
||||
@@ -91,7 +91,6 @@ def setup_parser(subparser):
|
||||
|
||||
|
||||
def _process_result(result, show, required_format, kwargs):
|
||||
result.raise_if_unsat()
|
||||
opt, _, _ = min(result.answers)
|
||||
if ("opt" in show) and (not required_format):
|
||||
tty.msg("Best of %d considered solutions." % result.nmodels)
|
||||
|
||||
@@ -23,7 +23,7 @@
|
||||
|
||||
|
||||
# tutorial configuration parameters
|
||||
tutorial_branch = "releases/v0.21"
|
||||
tutorial_branch = "releases/v0.22"
|
||||
tutorial_mirror = "file:///mirror"
|
||||
tutorial_key = os.path.join(spack.paths.share_path, "keys", "tutorial.pub")
|
||||
|
||||
|
||||
@@ -151,7 +151,8 @@ def is_installed(spec):
|
||||
key=lambda s: s.dag_hash(),
|
||||
)
|
||||
|
||||
return [spec for spec in specs if is_installed(spec)]
|
||||
with spack.store.STORE.db.read_transaction():
|
||||
return [spec for spec in specs if is_installed(spec)]
|
||||
|
||||
|
||||
def dependent_environments(
|
||||
@@ -239,6 +240,8 @@ def get_uninstall_list(args, specs: List[spack.spec.Spec], env: Optional[ev.Envi
|
||||
print()
|
||||
tty.info("The following environments still reference these specs:")
|
||||
colify([e.name for e in other_dependent_envs.keys()], indent=4)
|
||||
if env:
|
||||
msgs.append("use `spack remove` to remove the spec from the current environment")
|
||||
msgs.append("use `spack env remove` to remove environments")
|
||||
msgs.append("use `spack uninstall --force` to override")
|
||||
print()
|
||||
|
||||
@@ -214,8 +214,6 @@ def unit_test(parser, args, unknown_args):
|
||||
|
||||
# Ensure clingo is available before switching to the
|
||||
# mock configuration used by unit tests
|
||||
# Note: skip on windows here because for the moment,
|
||||
# clingo is wholly unsupported from bootstrap
|
||||
with spack.bootstrap.ensure_bootstrap_configuration():
|
||||
spack.bootstrap.ensure_core_dependencies()
|
||||
if pytest is None:
|
||||
|
||||
@@ -20,8 +20,10 @@
|
||||
|
||||
import spack.compilers
|
||||
import spack.error
|
||||
import spack.schema.environment
|
||||
import spack.spec
|
||||
import spack.util.executable
|
||||
import spack.util.libc
|
||||
import spack.util.module_cmd
|
||||
import spack.version
|
||||
from spack.util.environment import filter_system_paths
|
||||
@@ -107,7 +109,6 @@ def _parse_link_paths(string):
|
||||
"""
|
||||
lib_search_paths = False
|
||||
raw_link_dirs = []
|
||||
tty.debug("parsing implicit link info")
|
||||
for line in string.splitlines():
|
||||
if lib_search_paths:
|
||||
if line.startswith("\t"):
|
||||
@@ -122,7 +123,7 @@ def _parse_link_paths(string):
|
||||
continue
|
||||
if _LINKER_LINE_IGNORE.match(line):
|
||||
continue
|
||||
tty.debug("linker line: %s" % line)
|
||||
tty.debug(f"implicit link dirs: link line: {line}")
|
||||
|
||||
next_arg = False
|
||||
for arg in line.split():
|
||||
@@ -138,15 +139,12 @@ def _parse_link_paths(string):
|
||||
link_dir_arg = _LINK_DIR_ARG.match(arg)
|
||||
if link_dir_arg:
|
||||
link_dir = link_dir_arg.group("dir")
|
||||
tty.debug("linkdir: %s" % link_dir)
|
||||
raw_link_dirs.append(link_dir)
|
||||
|
||||
link_dir_arg = _LIBPATH_ARG.match(arg)
|
||||
if link_dir_arg:
|
||||
link_dir = link_dir_arg.group("dir")
|
||||
tty.debug("libpath: %s", link_dir)
|
||||
raw_link_dirs.append(link_dir)
|
||||
tty.debug("found raw link dirs: %s" % ", ".join(raw_link_dirs))
|
||||
|
||||
implicit_link_dirs = list()
|
||||
visited = set()
|
||||
@@ -156,7 +154,7 @@ def _parse_link_paths(string):
|
||||
implicit_link_dirs.append(normalized_path)
|
||||
visited.add(normalized_path)
|
||||
|
||||
tty.debug("found link dirs: %s" % ", ".join(implicit_link_dirs))
|
||||
tty.debug(f"implicit link dirs: result: {', '.join(implicit_link_dirs)}")
|
||||
return implicit_link_dirs
|
||||
|
||||
|
||||
@@ -417,17 +415,35 @@ def real_version(self):
|
||||
self._real_version = self.version
|
||||
return self._real_version
|
||||
|
||||
def implicit_rpaths(self):
|
||||
def implicit_rpaths(self) -> List[str]:
|
||||
if self.enable_implicit_rpaths is False:
|
||||
return []
|
||||
|
||||
# Put CXX first since it has the most linking issues
|
||||
# And because it has flags that affect linking
|
||||
link_dirs = self._get_compiler_link_paths()
|
||||
output = self.compiler_verbose_output
|
||||
|
||||
if not output:
|
||||
return []
|
||||
|
||||
link_dirs = _parse_non_system_link_dirs(output)
|
||||
|
||||
all_required_libs = list(self.required_libs) + Compiler._all_compiler_rpath_libraries
|
||||
return list(paths_containing_libs(link_dirs, all_required_libs))
|
||||
|
||||
@property
|
||||
def default_libc(self) -> Optional["spack.spec.Spec"]:
|
||||
"""Determine libc targeted by the compiler from link line"""
|
||||
output = self.compiler_verbose_output
|
||||
|
||||
if not output:
|
||||
return None
|
||||
|
||||
dynamic_linker = spack.util.libc.parse_dynamic_linker(output)
|
||||
|
||||
if not dynamic_linker:
|
||||
return None
|
||||
|
||||
return spack.util.libc.libc_from_dynamic_linker(dynamic_linker)
|
||||
|
||||
@property
|
||||
def required_libs(self):
|
||||
"""For executables created with this compiler, the compiler libraries
|
||||
@@ -436,17 +452,17 @@ def required_libs(self):
|
||||
# By default every compiler returns the empty list
|
||||
return []
|
||||
|
||||
def _get_compiler_link_paths(self):
|
||||
@property
|
||||
def compiler_verbose_output(self) -> Optional[str]:
|
||||
"""Verbose output from compiling a dummy C source file. Output is cached."""
|
||||
if not hasattr(self, "_compile_c_source_output"):
|
||||
self._compile_c_source_output = self._compile_dummy_c_source()
|
||||
return self._compile_c_source_output
|
||||
|
||||
def _compile_dummy_c_source(self) -> Optional[str]:
|
||||
cc = self.cc if self.cc else self.cxx
|
||||
if not cc or not self.verbose_flag:
|
||||
# Cannot determine implicit link paths without a compiler / verbose flag
|
||||
return []
|
||||
|
||||
# What flag types apply to first_compiler, in what order
|
||||
if cc == self.cc:
|
||||
flags = ["cflags", "cppflags", "ldflags"]
|
||||
else:
|
||||
flags = ["cxxflags", "cppflags", "ldflags"]
|
||||
return None
|
||||
|
||||
try:
|
||||
tmpdir = tempfile.mkdtemp(prefix="spack-implicit-link-info")
|
||||
@@ -458,20 +474,19 @@ def _get_compiler_link_paths(self):
|
||||
"int main(int argc, char* argv[]) { (void)argc; (void)argv; return 0; }\n"
|
||||
)
|
||||
cc_exe = spack.util.executable.Executable(cc)
|
||||
for flag_type in flags:
|
||||
for flag_type in ["cflags" if cc == self.cc else "cxxflags", "cppflags", "ldflags"]:
|
||||
cc_exe.add_default_arg(*self.flags.get(flag_type, []))
|
||||
|
||||
with self.compiler_environment():
|
||||
output = cc_exe(self.verbose_flag, fin, "-o", fout, output=str, error=str)
|
||||
return _parse_non_system_link_dirs(output)
|
||||
return cc_exe(self.verbose_flag, fin, "-o", fout, output=str, error=str)
|
||||
except spack.util.executable.ProcessError as pe:
|
||||
tty.debug("ProcessError: Command exited with non-zero status: " + pe.long_message)
|
||||
return []
|
||||
return None
|
||||
finally:
|
||||
shutil.rmtree(tmpdir, ignore_errors=True)
|
||||
|
||||
@property
|
||||
def verbose_flag(self):
|
||||
def verbose_flag(self) -> Optional[str]:
|
||||
"""
|
||||
This property should be overridden in the compiler subclass if a
|
||||
verbose flag is available.
|
||||
@@ -669,8 +684,8 @@ def __str__(self):
|
||||
|
||||
@contextlib.contextmanager
|
||||
def compiler_environment(self):
|
||||
# yield immediately if no modules
|
||||
if not self.modules:
|
||||
# Avoid modifying os.environ if possible.
|
||||
if not self.modules and not self.environment:
|
||||
yield
|
||||
return
|
||||
|
||||
@@ -687,13 +702,9 @@ def compiler_environment(self):
|
||||
spack.util.module_cmd.load_module(module)
|
||||
|
||||
# apply other compiler environment changes
|
||||
env = spack.util.environment.EnvironmentModifications()
|
||||
env.extend(spack.schema.environment.parse(self.environment))
|
||||
env.apply_modifications()
|
||||
spack.schema.environment.parse(self.environment).apply_modifications()
|
||||
|
||||
yield
|
||||
except BaseException:
|
||||
raise
|
||||
finally:
|
||||
# Restore environment regardless of whether inner code succeeded
|
||||
os.environ.clear()
|
||||
|
||||
@@ -10,6 +10,7 @@
|
||||
import itertools
|
||||
import multiprocessing.pool
|
||||
import os
|
||||
import warnings
|
||||
from typing import Dict, List, Optional, Tuple
|
||||
|
||||
import archspec.cpu
|
||||
@@ -109,27 +110,33 @@ def _to_dict(compiler):
|
||||
return {"compiler": d}
|
||||
|
||||
|
||||
def get_compiler_config(scope=None, init_config=False):
|
||||
def get_compiler_config(
|
||||
configuration: "spack.config.Configuration",
|
||||
*,
|
||||
scope: Optional[str] = None,
|
||||
init_config: bool = False,
|
||||
) -> List[Dict]:
|
||||
"""Return the compiler configuration for the specified architecture."""
|
||||
|
||||
config = spack.config.get("compilers", scope=scope) or []
|
||||
config = configuration.get("compilers", scope=scope) or []
|
||||
if config or not init_config:
|
||||
return config
|
||||
|
||||
merged_config = spack.config.get("compilers")
|
||||
merged_config = configuration.get("compilers")
|
||||
if merged_config:
|
||||
# Config is empty for this scope
|
||||
# Do not init config because there is a non-empty scope
|
||||
return config
|
||||
|
||||
_init_compiler_config(scope=scope)
|
||||
config = spack.config.get("compilers", scope=scope)
|
||||
_init_compiler_config(configuration, scope=scope)
|
||||
config = configuration.get("compilers", scope=scope)
|
||||
return config
|
||||
|
||||
|
||||
def get_compiler_config_from_packages(scope=None):
|
||||
def get_compiler_config_from_packages(
|
||||
configuration: "spack.config.Configuration", *, scope: Optional[str] = None
|
||||
) -> List[Dict]:
|
||||
"""Return the compiler configuration from packages.yaml"""
|
||||
config = spack.config.get("packages", scope=scope)
|
||||
config = configuration.get("packages", scope=scope)
|
||||
if not config:
|
||||
return []
|
||||
|
||||
@@ -149,7 +156,15 @@ def get_compiler_config_from_packages(scope=None):
|
||||
def _compiler_config_from_package_config(config):
|
||||
compilers = []
|
||||
for entry in config:
|
||||
compiler = _compiler_config_from_external(entry)
|
||||
try:
|
||||
compiler = _compiler_config_from_external(entry)
|
||||
except Exception as e:
|
||||
msg = "Reading compiler from packages config section failed\n"
|
||||
msg += f" Compiler: {entry.get('spec', None)}\n"
|
||||
msg += f" Prefix: {entry.get('prefix', None)}\n"
|
||||
msg += f" Failure: {e}"
|
||||
warnings.warn(msg)
|
||||
compiler = None
|
||||
if compiler:
|
||||
compilers.append(compiler)
|
||||
|
||||
@@ -157,33 +172,56 @@ def _compiler_config_from_package_config(config):
|
||||
|
||||
|
||||
def _compiler_config_from_external(config):
|
||||
extra_attributes_key = "extra_attributes"
|
||||
compilers_key = "compilers"
|
||||
c_key, cxx_key, fortran_key = "c", "cxx", "fortran"
|
||||
|
||||
# Allow `@x.y.z` instead of `@=x.y.z`
|
||||
spec = spack.spec.parse_with_version_concrete(config["spec"])
|
||||
# use str(spec.versions) to allow `@x.y.z` instead of `@=x.y.z`
|
||||
|
||||
compiler_spec = spack.spec.CompilerSpec(
|
||||
package_name_to_compiler_name.get(spec.name, spec.name), spec.version
|
||||
)
|
||||
|
||||
extra_attributes = config.get("extra_attributes", {})
|
||||
prefix = config.get("prefix", None)
|
||||
err_header = f"The external spec '{spec}' cannot be used as a compiler"
|
||||
|
||||
compiler_class = class_for_compiler_name(compiler_spec.name)
|
||||
paths = extra_attributes.get("paths", {})
|
||||
compiler_langs = ["cc", "cxx", "fc", "f77"]
|
||||
for lang in compiler_langs:
|
||||
if paths.setdefault(lang, None):
|
||||
continue
|
||||
|
||||
if not prefix:
|
||||
continue
|
||||
|
||||
# Check for files that satisfy the naming scheme for this compiler
|
||||
bindir = os.path.join(prefix, "bin")
|
||||
for f, regex in itertools.product(os.listdir(bindir), compiler_class.search_regexps(lang)):
|
||||
if regex.match(f):
|
||||
paths[lang] = os.path.join(bindir, f)
|
||||
|
||||
if all(v is None for v in paths.values()):
|
||||
# If extra_attributes is not there I might not want to use this entry as a compiler,
|
||||
# therefore just leave a debug message, but don't be loud with a warning.
|
||||
if extra_attributes_key not in config:
|
||||
tty.debug(f"[{__file__}] {err_header}: missing the '{extra_attributes_key}' key")
|
||||
return None
|
||||
extra_attributes = config[extra_attributes_key]
|
||||
|
||||
# If I have 'extra_attributes' warn if 'compilers' is missing, or we don't have a C compiler
|
||||
if compilers_key not in extra_attributes:
|
||||
warnings.warn(
|
||||
f"{err_header}: missing the '{compilers_key}' key under '{extra_attributes_key}'"
|
||||
)
|
||||
return None
|
||||
attribute_compilers = extra_attributes[compilers_key]
|
||||
|
||||
if c_key not in attribute_compilers:
|
||||
warnings.warn(
|
||||
f"{err_header}: missing the C compiler path under "
|
||||
f"'{extra_attributes_key}:{compilers_key}'"
|
||||
)
|
||||
return None
|
||||
c_compiler = attribute_compilers[c_key]
|
||||
|
||||
# C++ and Fortran compilers are not mandatory, so let's just leave a debug trace
|
||||
if cxx_key not in attribute_compilers:
|
||||
tty.debug(f"[{__file__}] The external spec {spec} does not have a C++ compiler")
|
||||
|
||||
if fortran_key not in attribute_compilers:
|
||||
tty.debug(f"[{__file__}] The external spec {spec} does not have a Fortran compiler")
|
||||
|
||||
# compilers format has cc/fc/f77, externals format has "c/fortran"
|
||||
paths = {
|
||||
"cc": c_compiler,
|
||||
"cxx": attribute_compilers.get(cxx_key, None),
|
||||
"fc": attribute_compilers.get(fortran_key, None),
|
||||
"f77": attribute_compilers.get(fortran_key, None),
|
||||
}
|
||||
|
||||
if not spec.architecture:
|
||||
host_platform = spack.platforms.host()
|
||||
@@ -216,13 +254,15 @@ def _compiler_config_from_external(config):
|
||||
return compiler_entry
|
||||
|
||||
|
||||
def _init_compiler_config(*, scope):
|
||||
def _init_compiler_config(
|
||||
configuration: "spack.config.Configuration", *, scope: Optional[str]
|
||||
) -> None:
|
||||
"""Compiler search used when Spack has no compilers."""
|
||||
compilers = find_compilers()
|
||||
compilers_dict = []
|
||||
for compiler in compilers:
|
||||
compilers_dict.append(_to_dict(compiler))
|
||||
spack.config.set("compilers", compilers_dict, scope=scope)
|
||||
configuration.set("compilers", compilers_dict, scope=scope)
|
||||
|
||||
|
||||
def compiler_config_files():
|
||||
@@ -233,7 +273,7 @@ def compiler_config_files():
|
||||
compiler_config = config.get("compilers", scope=name)
|
||||
if compiler_config:
|
||||
config_files.append(config.get_config_filename(name, "compilers"))
|
||||
compiler_config_from_packages = get_compiler_config_from_packages(scope=name)
|
||||
compiler_config_from_packages = get_compiler_config_from_packages(config, scope=name)
|
||||
if compiler_config_from_packages:
|
||||
config_files.append(config.get_config_filename(name, "packages"))
|
||||
return config_files
|
||||
@@ -246,7 +286,9 @@ def add_compilers_to_config(compilers, scope=None):
|
||||
compilers: a list of Compiler objects.
|
||||
scope: configuration scope to modify.
|
||||
"""
|
||||
compiler_config = get_compiler_config(scope, init_config=False)
|
||||
compiler_config = get_compiler_config(
|
||||
configuration=spack.config.CONFIG, scope=scope, init_config=False
|
||||
)
|
||||
for compiler in compilers:
|
||||
if not compiler.cc:
|
||||
tty.debug(f"{compiler.spec} does not have a C compiler")
|
||||
@@ -295,7 +337,9 @@ def _remove_compiler_from_scope(compiler_spec, scope):
|
||||
True if one or more compiler entries were actually removed, False otherwise
|
||||
"""
|
||||
assert scope is not None, "a specific scope is needed when calling this function"
|
||||
compiler_config = get_compiler_config(scope, init_config=False)
|
||||
compiler_config = get_compiler_config(
|
||||
configuration=spack.config.CONFIG, scope=scope, init_config=False
|
||||
)
|
||||
filtered_compiler_config = [
|
||||
compiler_entry
|
||||
for compiler_entry in compiler_config
|
||||
@@ -310,21 +354,28 @@ def _remove_compiler_from_scope(compiler_spec, scope):
|
||||
# We need to preserve the YAML type for comments, hence we are copying the
|
||||
# items in the list that has just been retrieved
|
||||
compiler_config[:] = filtered_compiler_config
|
||||
spack.config.set("compilers", compiler_config, scope=scope)
|
||||
spack.config.CONFIG.set("compilers", compiler_config, scope=scope)
|
||||
return True
|
||||
|
||||
|
||||
def all_compilers_config(scope=None, init_config=True):
|
||||
def all_compilers_config(
|
||||
configuration: "spack.config.Configuration",
|
||||
*,
|
||||
scope: Optional[str] = None,
|
||||
init_config: bool = True,
|
||||
) -> List["spack.compiler.Compiler"]:
|
||||
"""Return a set of specs for all the compiler versions currently
|
||||
available to build with. These are instances of CompilerSpec.
|
||||
"""
|
||||
from_packages_yaml = get_compiler_config_from_packages(scope)
|
||||
from_packages_yaml = get_compiler_config_from_packages(configuration, scope=scope)
|
||||
if from_packages_yaml:
|
||||
init_config = False
|
||||
from_compilers_yaml = get_compiler_config(scope, init_config)
|
||||
from_compilers_yaml = get_compiler_config(configuration, scope=scope, init_config=init_config)
|
||||
|
||||
result = from_compilers_yaml + from_packages_yaml
|
||||
key = lambda c: _compiler_from_config_entry(c["compiler"])
|
||||
# Dedupe entries by the compiler they represent
|
||||
# If the entry is invalid, treat it as unique for deduplication
|
||||
key = lambda c: _compiler_from_config_entry(c["compiler"] or id(c))
|
||||
return list(llnl.util.lang.dedupe(result, key=key))
|
||||
|
||||
|
||||
@@ -332,7 +383,7 @@ def all_compiler_specs(scope=None, init_config=True):
|
||||
# Return compiler specs from the merged config.
|
||||
return [
|
||||
spack.spec.parse_with_version_concrete(s["compiler"]["spec"], compiler=True)
|
||||
for s in all_compilers_config(scope, init_config)
|
||||
for s in all_compilers_config(spack.config.CONFIG, scope=scope, init_config=init_config)
|
||||
]
|
||||
|
||||
|
||||
@@ -492,11 +543,20 @@ def find_specs_by_arch(compiler_spec, arch_spec, scope=None, init_config=True):
|
||||
|
||||
|
||||
def all_compilers(scope=None, init_config=True):
|
||||
config = all_compilers_config(scope, init_config=init_config)
|
||||
compilers = list()
|
||||
for items in config:
|
||||
return all_compilers_from(
|
||||
configuration=spack.config.CONFIG, scope=scope, init_config=init_config
|
||||
)
|
||||
|
||||
|
||||
def all_compilers_from(configuration, scope=None, init_config=True):
|
||||
compilers = []
|
||||
for items in all_compilers_config(
|
||||
configuration=configuration, scope=scope, init_config=init_config
|
||||
):
|
||||
items = items["compiler"]
|
||||
compilers.append(_compiler_from_config_entry(items))
|
||||
compiler = _compiler_from_config_entry(items) # can be None in error case
|
||||
if compiler:
|
||||
compilers.append(compiler)
|
||||
return compilers
|
||||
|
||||
|
||||
@@ -507,7 +567,7 @@ def compilers_for_spec(
|
||||
"""This gets all compilers that satisfy the supplied CompilerSpec.
|
||||
Returns an empty list if none are found.
|
||||
"""
|
||||
config = all_compilers_config(scope, init_config)
|
||||
config = all_compilers_config(spack.config.CONFIG, scope=scope, init_config=init_config)
|
||||
|
||||
matches = set(find(compiler_spec, scope, init_config))
|
||||
compilers = []
|
||||
@@ -517,7 +577,7 @@ def compilers_for_spec(
|
||||
|
||||
|
||||
def compilers_for_arch(arch_spec, scope=None):
|
||||
config = all_compilers_config(scope)
|
||||
config = all_compilers_config(spack.config.CONFIG, scope=scope)
|
||||
return list(get_compilers(config, arch_spec=arch_spec))
|
||||
|
||||
|
||||
@@ -603,7 +663,10 @@ def _compiler_from_config_entry(items):
|
||||
compiler = _compiler_cache.get(config_id, None)
|
||||
|
||||
if compiler is None:
|
||||
compiler = compiler_from_dict(items)
|
||||
try:
|
||||
compiler = compiler_from_dict(items)
|
||||
except UnknownCompilerError as e:
|
||||
warnings.warn(e.message)
|
||||
_compiler_cache[config_id] = compiler
|
||||
|
||||
return compiler
|
||||
@@ -656,7 +719,9 @@ def get_compilers(config, cspec=None, arch_spec=None):
|
||||
raise ValueError(msg)
|
||||
continue
|
||||
|
||||
compilers.append(_compiler_from_config_entry(items))
|
||||
compiler = _compiler_from_config_entry(items)
|
||||
if compiler:
|
||||
compilers.append(compiler)
|
||||
|
||||
return compilers
|
||||
|
||||
@@ -933,10 +998,11 @@ def _default_make_compilers(cmp_id, paths):
|
||||
make_mixed_toolchain(flat_compilers)
|
||||
|
||||
# Finally, create the compiler list
|
||||
compilers = []
|
||||
compilers: List["spack.compiler.Compiler"] = []
|
||||
for compiler_id, _, compiler in flat_compilers:
|
||||
make_compilers = getattr(compiler_id.os, "make_compilers", _default_make_compilers)
|
||||
compilers.extend(make_compilers(compiler_id, compiler))
|
||||
candidates = make_compilers(compiler_id, compiler)
|
||||
compilers.extend(x for x in candidates if x.cc is not None)
|
||||
|
||||
return compilers
|
||||
|
||||
|
||||
@@ -38,10 +38,10 @@ class Clang(Compiler):
|
||||
cxx_names = ["clang++"]
|
||||
|
||||
# Subclasses use possible names of Fortran 77 compiler
|
||||
f77_names = ["flang"]
|
||||
f77_names = ["flang-new", "flang"]
|
||||
|
||||
# Subclasses use possible names of Fortran 90 compiler
|
||||
fc_names = ["flang"]
|
||||
fc_names = ["flang-new", "flang"]
|
||||
|
||||
version_argument = "--version"
|
||||
|
||||
@@ -96,6 +96,8 @@ def verbose_flag(self):
|
||||
|
||||
openmp_flag = "-fopenmp"
|
||||
|
||||
# C++ flags based on CMake Modules/Compiler/Clang.cmake
|
||||
|
||||
@property
|
||||
def cxx11_flag(self):
|
||||
if self.real_version < Version("3.3"):
|
||||
@@ -120,6 +122,24 @@ def cxx17_flag(self):
|
||||
|
||||
return "-std=c++17"
|
||||
|
||||
@property
|
||||
def cxx20_flag(self):
|
||||
if self.real_version < Version("5.0"):
|
||||
raise UnsupportedCompilerFlag(self, "the C++20 standard", "cxx20_flag", "< 5.0")
|
||||
elif self.real_version < Version("11.0"):
|
||||
return "-std=c++2a"
|
||||
else:
|
||||
return "-std=c++20"
|
||||
|
||||
@property
|
||||
def cxx23_flag(self):
|
||||
if self.real_version < Version("12.0"):
|
||||
raise UnsupportedCompilerFlag(self, "the C++23 standard", "cxx23_flag", "< 12.0")
|
||||
elif self.real_version < Version("17.0"):
|
||||
return "-std=c++2b"
|
||||
else:
|
||||
return "-std=c++23"
|
||||
|
||||
@property
|
||||
def c99_flag(self):
|
||||
return "-std=c99"
|
||||
@@ -142,7 +162,10 @@ def c17_flag(self):
|
||||
def c23_flag(self):
|
||||
if self.real_version < Version("9.0"):
|
||||
raise UnsupportedCompilerFlag(self, "the C23 standard", "c23_flag", "< 9.0")
|
||||
return "-std=c2x"
|
||||
elif self.real_version < Version("18.0"):
|
||||
return "-std=c2x"
|
||||
else:
|
||||
return "-std=c23"
|
||||
|
||||
@property
|
||||
def cc_pic_flag(self):
|
||||
@@ -171,10 +194,11 @@ def extract_version_from_output(cls, output):
|
||||
|
||||
match = re.search(
|
||||
# Normal clang compiler versions are left as-is
|
||||
r"clang version ([^ )\n]+)-svn[~.\w\d-]*|"
|
||||
r"(?:clang|flang-new) version ([^ )\n]+)-svn[~.\w\d-]*|"
|
||||
# Don't include hyphenated patch numbers in the version
|
||||
# (see https://github.com/spack/spack/pull/14365 for details)
|
||||
r"clang version ([^ )\n]+?)-[~.\w\d-]*|" r"clang version ([^ )\n]+)",
|
||||
r"(?:clang|flang-new) version ([^ )\n]+?)-[~.\w\d-]*|"
|
||||
r"(?:clang|flang-new) version ([^ )\n]+)",
|
||||
output,
|
||||
)
|
||||
if match:
|
||||
|
||||
@@ -1,34 +0,0 @@
|
||||
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import os
|
||||
|
||||
import spack.compilers.oneapi
|
||||
|
||||
|
||||
class Dpcpp(spack.compilers.oneapi.Oneapi):
|
||||
"""This is the same as the oneAPI compiler but uses dpcpp instead of
|
||||
icpx (for DPC++ source files). It explicitly refers to dpcpp, so that
|
||||
CMake test files which check the compiler name (e.g. CMAKE_CXX_COMPILER)
|
||||
detect it as dpcpp.
|
||||
|
||||
Ideally we could switch out icpx for dpcpp where needed in the oneAPI
|
||||
compiler definition, but two things are needed for that: (a) a way to
|
||||
tell the compiler that it should be using dpcpp and (b) a way to
|
||||
customize the link_paths
|
||||
|
||||
See also: https://www.intel.com/content/www/us/en/develop/documentation/oneapi-dpcpp-cpp-compiler-dev-guide-and-reference/top/compiler-setup/using-the-command-line/invoking-the-compiler.html
|
||||
"""
|
||||
|
||||
# Subclasses use possible names of C++ compiler
|
||||
cxx_names = ["dpcpp"]
|
||||
|
||||
# Named wrapper links within build_env_path
|
||||
link_paths = {
|
||||
"cc": os.path.join("oneapi", "icx"),
|
||||
"cxx": os.path.join("oneapi", "dpcpp"),
|
||||
"f77": os.path.join("oneapi", "ifx"),
|
||||
"fc": os.path.join("oneapi", "ifx"),
|
||||
}
|
||||
@@ -8,7 +8,7 @@
|
||||
import subprocess
|
||||
import sys
|
||||
import tempfile
|
||||
from typing import Dict, List, Set
|
||||
from typing import Dict, List
|
||||
|
||||
import archspec.cpu
|
||||
|
||||
@@ -20,15 +20,7 @@
|
||||
from spack.error import SpackError
|
||||
from spack.version import Version, VersionRange
|
||||
|
||||
avail_fc_version: Set[str] = set()
|
||||
fc_path: Dict[str, str] = dict()
|
||||
|
||||
fortran_mapping = {
|
||||
"2021.3.0": "19.29.30133",
|
||||
"2021.2.1": "19.28.29913",
|
||||
"2021.2.0": "19.28.29334",
|
||||
"2021.1.0": "19.28.29333",
|
||||
}
|
||||
FC_PATH: Dict[str, str] = dict()
|
||||
|
||||
|
||||
class CmdCall:
|
||||
@@ -115,15 +107,13 @@ def command_str(self):
|
||||
return f"{script} {self.arch} {self.sdk_ver} {self.vcvars_ver}"
|
||||
|
||||
|
||||
def get_valid_fortran_pth(comp_ver):
|
||||
cl_ver = str(comp_ver)
|
||||
def get_valid_fortran_pth():
|
||||
"""Assign maximum available fortran compiler version"""
|
||||
# TODO (johnwparent): validate compatibility w/ try compiler
|
||||
# functionality when added
|
||||
sort_fn = lambda fc_ver: Version(fc_ver)
|
||||
sort_fc_ver = sorted(list(avail_fc_version), key=sort_fn)
|
||||
for ver in sort_fc_ver:
|
||||
if ver in fortran_mapping:
|
||||
if Version(cl_ver) <= Version(fortran_mapping[ver]):
|
||||
return fc_path[ver]
|
||||
return None
|
||||
sort_fc_ver = sorted(list(FC_PATH.keys()), key=sort_fn)
|
||||
return FC_PATH[sort_fc_ver[-1]] if sort_fc_ver else None
|
||||
|
||||
|
||||
class Msvc(Compiler):
|
||||
@@ -167,11 +157,9 @@ def __init__(self, *args, **kwargs):
|
||||
# This positional argument "paths" is later parsed and process by the base class
|
||||
# via the call to `super` later in this method
|
||||
paths = args[3]
|
||||
# This positional argument "cspec" is also parsed and handled by the base class
|
||||
# constructor
|
||||
cspec = args[0]
|
||||
new_pth = [pth if pth else get_valid_fortran_pth(cspec.version) for pth in paths]
|
||||
paths[:] = new_pth
|
||||
latest_fc = get_valid_fortran_pth()
|
||||
new_pth = [pth if pth else latest_fc for pth in paths[2:]]
|
||||
paths[2:] = new_pth
|
||||
# Initialize, deferring to base class but then adding the vcvarsallfile
|
||||
# file based on compiler executable path.
|
||||
super().__init__(*args, **kwargs)
|
||||
@@ -183,7 +171,7 @@ def __init__(self, *args, **kwargs):
|
||||
# and stores their path, but their respective VCVARS
|
||||
# file must be invoked before useage.
|
||||
env_cmds = []
|
||||
compiler_root = os.path.join(self.cc, "../../../../../../..")
|
||||
compiler_root = os.path.join(os.path.dirname(self.cc), "../../../../../..")
|
||||
vcvars_script_path = os.path.join(compiler_root, "Auxiliary", "Build", "vcvars64.bat")
|
||||
# get current platform architecture and format for vcvars argument
|
||||
arch = spack.platforms.real_host().default.lower()
|
||||
@@ -198,11 +186,34 @@ def __init__(self, *args, **kwargs):
|
||||
# paths[2] refers to the fc path and is a generic check
|
||||
# for a fortran compiler
|
||||
if paths[2]:
|
||||
|
||||
def get_oneapi_root(pth: str):
|
||||
"""From within a prefix known to be a oneAPI path
|
||||
determine the oneAPI root path from arbitrary point
|
||||
under root
|
||||
|
||||
Args:
|
||||
pth: path prefixed within oneAPI root
|
||||
"""
|
||||
if not pth:
|
||||
return ""
|
||||
while os.path.basename(pth) and os.path.basename(pth) != "oneAPI":
|
||||
pth = os.path.dirname(pth)
|
||||
return pth
|
||||
|
||||
# If this found, it sets all the vars
|
||||
oneapi_root = os.getenv("ONEAPI_ROOT")
|
||||
oneapi_root = get_oneapi_root(self.fc)
|
||||
if not oneapi_root:
|
||||
raise RuntimeError(f"Non-oneAPI Fortran compiler {self.fc} assigned to MSVC")
|
||||
oneapi_root_setvars = os.path.join(oneapi_root, "setvars.bat")
|
||||
# some oneAPI exes return a version more precise than their
|
||||
# install paths specify, so we determine path from
|
||||
# the install path rather than the fc executable itself
|
||||
numver = r"\d+\.\d+(?:\.\d+)?"
|
||||
pattern = f"((?:{numver})|(?:latest))"
|
||||
version_from_path = re.search(pattern, self.fc).group(1)
|
||||
oneapi_version_setvars = os.path.join(
|
||||
oneapi_root, "compiler", str(self.ifx_version), "env", "vars.bat"
|
||||
oneapi_root, "compiler", version_from_path, "env", "vars.bat"
|
||||
)
|
||||
# order matters here, the specific version env must be invoked first,
|
||||
# otherwise it will be ignored if the root setvars sets up the oneapi
|
||||
@@ -314,23 +325,19 @@ def setup_custom_environment(self, pkg, env):
|
||||
|
||||
@classmethod
|
||||
def fc_version(cls, fc):
|
||||
# We're using intel for the Fortran compilers, which exist if
|
||||
# ONEAPI_ROOT is a meaningful variable
|
||||
if not sys.platform == "win32":
|
||||
return "unknown"
|
||||
fc_ver = cls.default_version(fc)
|
||||
avail_fc_version.add(fc_ver)
|
||||
fc_path[fc_ver] = fc
|
||||
if os.getenv("ONEAPI_ROOT"):
|
||||
try:
|
||||
sps = spack.operating_systems.windows_os.WindowsOs().compiler_search_paths
|
||||
except AttributeError:
|
||||
raise SpackError("Windows compiler search paths not established")
|
||||
clp = spack.util.executable.which_string("cl", path=sps)
|
||||
ver = cls.default_version(clp)
|
||||
else:
|
||||
ver = fc_ver
|
||||
return ver
|
||||
FC_PATH[fc_ver] = fc
|
||||
try:
|
||||
sps = spack.operating_systems.windows_os.WindowsOs().compiler_search_paths
|
||||
except AttributeError:
|
||||
raise SpackError(
|
||||
"Windows compiler search paths not established, "
|
||||
"please report this behavior to github.com/spack/spack"
|
||||
)
|
||||
clp = spack.util.executable.which_string("cl", path=sps)
|
||||
return cls.default_version(clp) if clp else fc_ver
|
||||
|
||||
@classmethod
|
||||
def f77_version(cls, f77):
|
||||
|
||||
@@ -64,7 +64,7 @@ def verbose_flag(self):
|
||||
#
|
||||
# This way, we at least enable the implicit rpath detection, which is
|
||||
# based on compilation of a C file (see method
|
||||
# spack.compiler._get_compiler_link_paths): in the case of a mixed
|
||||
# spack.compiler._compile_dummy_c_source): in the case of a mixed
|
||||
# NAG/GCC toolchain, the flag will be passed to g++ (e.g.
|
||||
# 'g++ -Wl,-v ./main.c'), otherwise, the flag will be passed to nagfor
|
||||
# (e.g. 'nagfor -Wl,-v ./main.c' - note that nagfor recognizes '.c'
|
||||
|
||||
@@ -74,6 +74,10 @@ class Concretizer:
|
||||
#: during concretization. Used for testing and for mirror creation
|
||||
check_for_compiler_existence = None
|
||||
|
||||
#: Packages that the old concretizer cannot deal with correctly, and cannot build anyway.
|
||||
#: Those will not be considered as providers for virtuals.
|
||||
non_buildable_packages = {"glibc", "musl"}
|
||||
|
||||
def __init__(self, abstract_spec=None):
|
||||
if Concretizer.check_for_compiler_existence is None:
|
||||
Concretizer.check_for_compiler_existence = not spack.config.get(
|
||||
@@ -113,7 +117,11 @@ def _valid_virtuals_and_externals(self, spec):
|
||||
pref_key = lambda spec: 0 # no-op pref key
|
||||
|
||||
if spec.virtual:
|
||||
candidates = spack.repo.PATH.providers_for(spec)
|
||||
candidates = [
|
||||
s
|
||||
for s in spack.repo.PATH.providers_for(spec)
|
||||
if s.name not in self.non_buildable_packages
|
||||
]
|
||||
if not candidates:
|
||||
raise spack.error.UnsatisfiableProviderSpecError(candidates[0], spec)
|
||||
|
||||
@@ -749,7 +757,6 @@ def _concretize_specs_together_new(*abstract_specs, **kwargs):
|
||||
result = solver.solve(
|
||||
abstract_specs, tests=kwargs.get("tests", False), allow_deprecated=allow_deprecated
|
||||
)
|
||||
result.raise_if_unsat()
|
||||
return [s.copy() for s in result.specs]
|
||||
|
||||
|
||||
|
||||
@@ -107,7 +107,7 @@
|
||||
|
||||
#: metavar to use for commands that accept scopes
|
||||
#: this is shorter and more readable than listing all choices
|
||||
SCOPES_METAVAR = "{defaults,system,site,user}[/PLATFORM] or env:ENVIRONMENT"
|
||||
SCOPES_METAVAR = "{defaults,system,site,user,command_line}[/PLATFORM] or env:ENVIRONMENT"
|
||||
|
||||
#: Base name for the (internal) overrides scope.
|
||||
_OVERRIDES_BASE_NAME = "overrides-"
|
||||
@@ -1562,8 +1562,9 @@ def ensure_latest_format_fn(section: str) -> Callable[[YamlConfigDict], bool]:
|
||||
def use_configuration(
|
||||
*scopes_or_paths: Union[ConfigScope, str]
|
||||
) -> Generator[Configuration, None, None]:
|
||||
"""Use the configuration scopes passed as arguments within the
|
||||
context manager.
|
||||
"""Use the configuration scopes passed as arguments within the context manager.
|
||||
|
||||
This function invalidates caches, and is therefore very slow.
|
||||
|
||||
Args:
|
||||
*scopes_or_paths: scope objects or paths to be used
|
||||
|
||||
@@ -12,26 +12,26 @@
|
||||
},
|
||||
"os_package_manager": "yum_amazon"
|
||||
},
|
||||
"fedora:38": {
|
||||
"fedora:40": {
|
||||
"bootstrap": {
|
||||
"template": "container/fedora_38.dockerfile",
|
||||
"image": "docker.io/fedora:38"
|
||||
"template": "container/fedora.dockerfile",
|
||||
"image": "docker.io/fedora:40"
|
||||
},
|
||||
"os_package_manager": "dnf",
|
||||
"build": "spack/fedora38",
|
||||
"build": "spack/fedora40",
|
||||
"final": {
|
||||
"image": "docker.io/fedora:38"
|
||||
"image": "docker.io/fedora:40"
|
||||
}
|
||||
},
|
||||
"fedora:37": {
|
||||
"fedora:39": {
|
||||
"bootstrap": {
|
||||
"template": "container/fedora_37.dockerfile",
|
||||
"image": "docker.io/fedora:37"
|
||||
"template": "container/fedora.dockerfile",
|
||||
"image": "docker.io/fedora:39"
|
||||
},
|
||||
"os_package_manager": "dnf",
|
||||
"build": "spack/fedora37",
|
||||
"build": "spack/fedora39",
|
||||
"final": {
|
||||
"image": "docker.io/fedora:37"
|
||||
"image": "docker.io/fedora:39"
|
||||
}
|
||||
},
|
||||
"rockylinux:9": {
|
||||
@@ -116,6 +116,13 @@
|
||||
},
|
||||
"os_package_manager": "apt"
|
||||
},
|
||||
"ubuntu:24.04": {
|
||||
"bootstrap": {
|
||||
"template": "container/ubuntu_2404.dockerfile"
|
||||
},
|
||||
"os_package_manager": "apt",
|
||||
"build": "spack/ubuntu-noble"
|
||||
},
|
||||
"ubuntu:22.04": {
|
||||
"bootstrap": {
|
||||
"template": "container/ubuntu_2204.dockerfile"
|
||||
@@ -129,13 +136,6 @@
|
||||
},
|
||||
"build": "spack/ubuntu-focal",
|
||||
"os_package_manager": "apt"
|
||||
},
|
||||
"ubuntu:18.04": {
|
||||
"bootstrap": {
|
||||
"template": "container/ubuntu_1804.dockerfile"
|
||||
},
|
||||
"os_package_manager": "apt",
|
||||
"build": "spack/ubuntu-bionic"
|
||||
}
|
||||
},
|
||||
"os_package_managers": {
|
||||
|
||||
@@ -25,6 +25,7 @@
|
||||
import socket
|
||||
import sys
|
||||
import time
|
||||
from json import JSONDecoder
|
||||
from typing import (
|
||||
Any,
|
||||
Callable,
|
||||
@@ -818,7 +819,8 @@ def _read_from_file(self, filename):
|
||||
"""
|
||||
try:
|
||||
with open(filename, "r") as f:
|
||||
fdata = sjson.load(f)
|
||||
# In the future we may use a stream of JSON objects, hence `raw_decode` for compat.
|
||||
fdata, _ = JSONDecoder().raw_decode(f.read())
|
||||
except Exception as e:
|
||||
raise CorruptDatabaseError("error parsing database:", str(e)) from e
|
||||
|
||||
@@ -833,27 +835,24 @@ def check(cond, msg):
|
||||
|
||||
# High-level file checks
|
||||
db = fdata["database"]
|
||||
check("installs" in db, "no 'installs' in JSON DB.")
|
||||
check("version" in db, "no 'version' in JSON DB.")
|
||||
|
||||
installs = db["installs"]
|
||||
|
||||
# TODO: better version checking semantics.
|
||||
version = vn.Version(db["version"])
|
||||
if version > _DB_VERSION:
|
||||
raise InvalidDatabaseVersionError(self, _DB_VERSION, version)
|
||||
elif version < _DB_VERSION:
|
||||
if not any(old == version and new == _DB_VERSION for old, new in _SKIP_REINDEX):
|
||||
tty.warn(
|
||||
"Spack database version changed from %s to %s. Upgrading."
|
||||
% (version, _DB_VERSION)
|
||||
)
|
||||
elif version < _DB_VERSION and not any(
|
||||
old == version and new == _DB_VERSION for old, new in _SKIP_REINDEX
|
||||
):
|
||||
tty.warn(f"Spack database version changed from {version} to {_DB_VERSION}. Upgrading.")
|
||||
|
||||
self.reindex(spack.store.STORE.layout)
|
||||
installs = dict(
|
||||
(k, v.to_dict(include_fields=self._record_fields))
|
||||
for k, v in self._data.items()
|
||||
)
|
||||
self.reindex(spack.store.STORE.layout)
|
||||
installs = dict(
|
||||
(k, v.to_dict(include_fields=self._record_fields)) for k, v in self._data.items()
|
||||
)
|
||||
else:
|
||||
check("installs" in db, "no 'installs' in JSON DB.")
|
||||
installs = db["installs"]
|
||||
|
||||
spec_reader = reader(version)
|
||||
|
||||
@@ -1621,15 +1620,32 @@ def query_local(self, *args, **kwargs):
|
||||
query_local.__doc__ += _QUERY_DOCSTRING
|
||||
|
||||
def query(self, *args, **kwargs):
|
||||
"""Query the Spack database including all upstream databases."""
|
||||
"""Query the Spack database including all upstream databases.
|
||||
|
||||
Additional Arguments:
|
||||
install_tree (str): query 'all' (default), 'local', 'upstream', or upstream path
|
||||
"""
|
||||
install_tree = kwargs.pop("install_tree", "all")
|
||||
valid_trees = ["all", "upstream", "local", self.root] + [u.root for u in self.upstream_dbs]
|
||||
if install_tree not in valid_trees:
|
||||
msg = "Invalid install_tree argument to Database.query()\n"
|
||||
msg += f"Try one of {', '.join(valid_trees)}"
|
||||
tty.error(msg)
|
||||
return []
|
||||
|
||||
upstream_results = []
|
||||
for upstream_db in self.upstream_dbs:
|
||||
upstreams = self.upstream_dbs
|
||||
if install_tree not in ("all", "upstream"):
|
||||
upstreams = [u for u in self.upstream_dbs if u.root == install_tree]
|
||||
for upstream_db in upstreams:
|
||||
# queries for upstream DBs need to *not* lock - we may not
|
||||
# have permissions to do this and the upstream DBs won't know about
|
||||
# us anyway (so e.g. they should never uninstall specs)
|
||||
upstream_results.extend(upstream_db._query(*args, **kwargs) or [])
|
||||
|
||||
local_results = set(self.query_local(*args, **kwargs))
|
||||
local_results = []
|
||||
if install_tree in ("all", "local") or self.root == install_tree:
|
||||
local_results = set(self.query_local(*args, **kwargs))
|
||||
|
||||
results = list(local_results) + list(x for x in upstream_results if x not in local_results)
|
||||
|
||||
|
||||
@@ -83,26 +83,15 @@ def executables_in_path(path_hints: List[str]) -> Dict[str, str]:
|
||||
return path_to_dict(search_paths)
|
||||
|
||||
|
||||
def get_elf_compat(path):
|
||||
"""For ELF files, get a triplet (EI_CLASS, EI_DATA, e_machine) and see if
|
||||
it is host-compatible."""
|
||||
# On ELF platforms supporting, we try to be a bit smarter when it comes to shared
|
||||
# libraries, by dropping those that are not host compatible.
|
||||
with open(path, "rb") as f:
|
||||
elf = elf_utils.parse_elf(f, only_header=True)
|
||||
return (elf.is_64_bit, elf.is_little_endian, elf.elf_hdr.e_machine)
|
||||
|
||||
|
||||
def accept_elf(path, host_compat):
|
||||
"""Accept an ELF file if the header matches the given compat triplet,
|
||||
obtained with :py:func:`get_elf_compat`. In case it's not an ELF (e.g.
|
||||
static library, or some arbitrary file, fall back to is_readable_file)."""
|
||||
"""Accept an ELF file if the header matches the given compat triplet. In case it's not an ELF
|
||||
(e.g. static library, or some arbitrary file, fall back to is_readable_file)."""
|
||||
# Fast path: assume libraries at least have .so in their basename.
|
||||
# Note: don't replace with splitext, because of libsmth.so.1.2.3 file names.
|
||||
if ".so" not in os.path.basename(path):
|
||||
return llnl.util.filesystem.is_readable_file(path)
|
||||
try:
|
||||
return host_compat == get_elf_compat(path)
|
||||
return host_compat == elf_utils.get_elf_compat(path)
|
||||
except (OSError, elf_utils.ElfParsingError):
|
||||
return llnl.util.filesystem.is_readable_file(path)
|
||||
|
||||
@@ -155,7 +144,7 @@ def libraries_in_ld_and_system_library_path(
|
||||
search_paths = list(llnl.util.lang.dedupe(search_paths, key=file_identifier))
|
||||
|
||||
try:
|
||||
host_compat = get_elf_compat(sys.executable)
|
||||
host_compat = elf_utils.get_elf_compat(sys.executable)
|
||||
accept = lambda path: accept_elf(path, host_compat)
|
||||
except (OSError, elf_utils.ElfParsingError):
|
||||
accept = llnl.util.filesystem.is_readable_file
|
||||
|
||||
@@ -11,6 +11,7 @@
|
||||
|
||||
from llnl.util import filesystem
|
||||
|
||||
import spack.platforms
|
||||
import spack.repo
|
||||
import spack.spec
|
||||
from spack.util import spack_yaml
|
||||
@@ -32,6 +33,8 @@ class ExpectedTestResult(NamedTuple):
|
||||
|
||||
#: Spec to be detected
|
||||
spec: str
|
||||
#: Attributes expected in the external spec
|
||||
extra_attributes: Dict[str, str]
|
||||
|
||||
|
||||
class DetectionTest(NamedTuple):
|
||||
@@ -100,7 +103,10 @@ def _create_executable_scripts(self, mock_executables: MockExecutables) -> List[
|
||||
|
||||
@property
|
||||
def expected_specs(self) -> List[spack.spec.Spec]:
|
||||
return [spack.spec.Spec(r.spec) for r in self.test.results]
|
||||
return [
|
||||
spack.spec.Spec.from_detection(item.spec, extra_attributes=item.extra_attributes)
|
||||
for item in self.test.results
|
||||
]
|
||||
|
||||
|
||||
def detection_tests(pkg_name: str, repository: spack.repo.RepoPath) -> List[Runner]:
|
||||
@@ -117,9 +123,13 @@ def detection_tests(pkg_name: str, repository: spack.repo.RepoPath) -> List[Runn
|
||||
"""
|
||||
result = []
|
||||
detection_tests_content = read_detection_tests(pkg_name, repository)
|
||||
current_platform = str(spack.platforms.host())
|
||||
|
||||
tests_by_path = detection_tests_content.get("paths", [])
|
||||
for single_test_data in tests_by_path:
|
||||
if current_platform not in single_test_data.get("platforms", [current_platform]):
|
||||
continue
|
||||
|
||||
mock_executables = []
|
||||
for layout in single_test_data["layout"]:
|
||||
mock_executables.append(
|
||||
@@ -127,7 +137,11 @@ def detection_tests(pkg_name: str, repository: spack.repo.RepoPath) -> List[Runn
|
||||
)
|
||||
expected_results = []
|
||||
for assertion in single_test_data["results"]:
|
||||
expected_results.append(ExpectedTestResult(spec=assertion["spec"]))
|
||||
expected_results.append(
|
||||
ExpectedTestResult(
|
||||
spec=assertion["spec"], extra_attributes=assertion.get("extra_attributes", {})
|
||||
)
|
||||
)
|
||||
|
||||
current_test = DetectionTest(
|
||||
pkg_name=pkg_name, layout=mock_executables, results=expected_results
|
||||
|
||||
@@ -27,6 +27,7 @@ class OpenMpi(Package):
|
||||
* ``variant``
|
||||
* ``version``
|
||||
* ``requires``
|
||||
* ``redistribute``
|
||||
|
||||
"""
|
||||
import collections
|
||||
@@ -63,6 +64,7 @@ class OpenMpi(Package):
|
||||
__all__ = [
|
||||
"DirectiveError",
|
||||
"DirectiveMeta",
|
||||
"DisableRedistribute",
|
||||
"version",
|
||||
"conflicts",
|
||||
"depends_on",
|
||||
@@ -75,6 +77,7 @@ class OpenMpi(Package):
|
||||
"resource",
|
||||
"build_system",
|
||||
"requires",
|
||||
"redistribute",
|
||||
]
|
||||
|
||||
#: These are variant names used by Spack internally; packages can't use them
|
||||
@@ -94,6 +97,9 @@ class OpenMpi(Package):
|
||||
PatchesType = Optional[Union[Patcher, str, List[Union[Patcher, str]]]]
|
||||
|
||||
|
||||
SUPPORTED_LANGUAGES = ("fortran", "cxx")
|
||||
|
||||
|
||||
def _make_when_spec(value: WhenType) -> Optional["spack.spec.Spec"]:
|
||||
"""Create a ``Spec`` that indicates when a directive should be applied.
|
||||
|
||||
@@ -585,6 +591,9 @@ def depends_on(
|
||||
@see The section "Dependency specs" in the Spack Packaging Guide.
|
||||
|
||||
"""
|
||||
if spack.spec.Spec(spec).name in SUPPORTED_LANGUAGES:
|
||||
assert type == "build", "languages must be of 'build' type"
|
||||
return _language(lang_spec_str=spec, when=when)
|
||||
|
||||
def _execute_depends_on(pkg: "spack.package_base.PackageBase"):
|
||||
_depends_on(pkg, spec, when=when, type=type, patches=patches)
|
||||
@@ -592,9 +601,68 @@ def _execute_depends_on(pkg: "spack.package_base.PackageBase"):
|
||||
return _execute_depends_on
|
||||
|
||||
|
||||
#: Store whether a given Spec source/binary should not be redistributed.
|
||||
class DisableRedistribute:
|
||||
def __init__(self, source, binary):
|
||||
self.source = source
|
||||
self.binary = binary
|
||||
|
||||
|
||||
@directive("disable_redistribute")
|
||||
def redistribute(source=None, binary=None, when: WhenType = None):
|
||||
"""Can be used inside a Package definition to declare that
|
||||
the package source and/or compiled binaries should not be
|
||||
redistributed.
|
||||
|
||||
By default, Packages allow source/binary distribution (i.e. in
|
||||
mirrors). Because of this, and because overlapping enable/
|
||||
disable specs are not allowed, this directive only allows users
|
||||
to explicitly disable redistribution for specs.
|
||||
"""
|
||||
|
||||
return lambda pkg: _execute_redistribute(pkg, source, binary, when)
|
||||
|
||||
|
||||
def _execute_redistribute(
|
||||
pkg: "spack.package_base.PackageBase", source=None, binary=None, when: WhenType = None
|
||||
):
|
||||
if source is None and binary is None:
|
||||
return
|
||||
elif (source is True) or (binary is True):
|
||||
raise DirectiveError(
|
||||
"Source/binary distribution are true by default, they can only "
|
||||
"be explicitly disabled."
|
||||
)
|
||||
|
||||
if source is None:
|
||||
source = True
|
||||
if binary is None:
|
||||
binary = True
|
||||
|
||||
when_spec = _make_when_spec(when)
|
||||
if not when_spec:
|
||||
return
|
||||
if source is False:
|
||||
max_constraint = spack.spec.Spec(f"{pkg.name}@{when_spec.versions}")
|
||||
if not max_constraint.satisfies(when_spec):
|
||||
raise DirectiveError("Source distribution can only be disabled for versions")
|
||||
|
||||
if when_spec in pkg.disable_redistribute:
|
||||
disable = pkg.disable_redistribute[when_spec]
|
||||
if not source:
|
||||
disable.source = True
|
||||
if not binary:
|
||||
disable.binary = True
|
||||
else:
|
||||
pkg.disable_redistribute[when_spec] = DisableRedistribute(
|
||||
source=not source, binary=not binary
|
||||
)
|
||||
|
||||
|
||||
@directive(("extendees", "dependencies"))
|
||||
def extends(spec, when=None, type=("build", "run"), patches=None):
|
||||
"""Same as depends_on, but also adds this package to the extendee list.
|
||||
In case of Python, also adds a dependency on python-venv.
|
||||
|
||||
keyword arguments can be passed to extends() so that extension
|
||||
packages can pass parameters to the extendee's extension
|
||||
@@ -610,6 +678,11 @@ def _execute_extends(pkg):
|
||||
_depends_on(pkg, spec, when=when, type=type, patches=patches)
|
||||
spec_obj = spack.spec.Spec(spec)
|
||||
|
||||
# When extending python, also add a dependency on python-venv. This is done so that
|
||||
# Spack environment views are Python virtual environments.
|
||||
if spec_obj.name == "python" and not pkg.name == "python-venv":
|
||||
_depends_on(pkg, "python-venv", when=when, type=("build", "run"))
|
||||
|
||||
# TODO: the values of the extendees dictionary are not used. Remove in next refactor.
|
||||
pkg.extendees[spec_obj.name] = (spec_obj, None)
|
||||
|
||||
@@ -967,7 +1040,6 @@ def license(
|
||||
checked_by: string or list of strings indicating which github user checked the
|
||||
license (if any).
|
||||
when: A spec specifying when the license applies.
|
||||
when: A spec specifying when the license applies.
|
||||
"""
|
||||
|
||||
return lambda pkg: _execute_license(pkg, license_identifier, when)
|
||||
@@ -1014,6 +1086,21 @@ def _execute_requires(pkg: "spack.package_base.PackageBase"):
|
||||
return _execute_requires
|
||||
|
||||
|
||||
@directive("languages")
|
||||
def _language(lang_spec_str: str, *, when: Optional[Union[str, bool]] = None):
|
||||
"""Temporary implementation of language virtuals, until compilers are proper dependencies."""
|
||||
|
||||
def _execute_languages(pkg: "spack.package_base.PackageBase"):
|
||||
when_spec = _make_when_spec(when)
|
||||
if not when_spec:
|
||||
return
|
||||
|
||||
languages = pkg.languages.setdefault(when_spec, set())
|
||||
languages.add(lang_spec_str)
|
||||
|
||||
return _execute_languages
|
||||
|
||||
|
||||
class DirectiveError(spack.error.SpackError):
|
||||
"""This is raised when something is wrong with a package directive."""
|
||||
|
||||
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user