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Author SHA1 Message Date
Gregory Becker
c6d4037758 update version number to 0.23.0 2024-11-17 00:59:27 -05:00
Gregory Becker
08f1cf9ae2 Update CHANGELOG.md for v0.23.0 2024-11-17 00:59:27 -05:00
Todd Gamblin
48dfa3c95e Spec: prefer a splice-specific method to __len__ (#47585)
Automatic splicing say `Spec` grow a `__len__` method but it's only used
in one place and it's not clear the semantics are useful elsewhere. It also
runs the risk of Specs one day being confused for other types of containers.

Rather than introduce a new function for one algorithm, let's use a more
specific method in the splice code.

- [x] Use topological ordering in `_resolve_automatic_splices` instead of 
      sorting by node count
- [x] delete `Spec.__len__()` and `Spec.__bool__()`

---------

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Greg Becker <becker33@llnl.gov>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-14 08:24:06 +01:00
Todd Gamblin
e5c411d8f0 spack spec: simplify and unify output (#47574)
`spack spec` output has looked like this for a while:

```console
> spack spec /v5fn6xo /wd2p2v7
Input spec
--------------------------------
 -   /v5fn6xo

Concretized
--------------------------------
[+]  openssl@3.3.1%apple-clang@16.0.0~docs+shared build_system=generic certs=mozilla arch=darwin-sequoia-m1
[+]      ^ca-certificates-mozilla@2023-05-30%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
...

Input spec
--------------------------------
 -   /wd2p2v7

Concretized
--------------------------------
[+]  py-six@1.16.0%apple-clang@16.0.0 build_system=python_pip arch=darwin-sequoia-m1
[+]      ^py-pip@23.1.2%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
```

But the input spec is right there on the CLI, and it doesn't add anything to the output.
Also, since #44843, specs concretized in the CLI line can be unified, so it makes sense
to display them as we did in #44489 -- as one multi-root tree instead of as multiple
single-root trees.

With this PR, concretize output now looks like this:

```console
> spack spec /v5fn6xo /wd2p2v7
[+]  openssl@3.3.1%apple-clang@16.0.0~docs+shared build_system=generic certs=mozilla arch=darwin-sequoia-m1
[+]      ^ca-certificates-mozilla@2023-05-30%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
[+]      ^gmake@4.4.1%apple-clang@16.0.0~guile build_system=generic arch=darwin-sequoia-m1
[+]      ^perl@5.40.0%apple-clang@16.0.0+cpanm+opcode+open+shared+threads build_system=generic arch=darwin-sequoia-m1
[+]          ^berkeley-db@18.1.40%apple-clang@16.0.0+cxx~docs+stl build_system=autotools patches=26090f4,b231fcc arch=darwin-sequoia-m1
[+]          ^bzip2@1.0.8%apple-clang@16.0.0~debug~pic+shared build_system=generic arch=darwin-sequoia-m1
[+]              ^diffutils@3.10%apple-clang@16.0.0 build_system=autotools arch=darwin-sequoia-m1
[+]                  ^libiconv@1.17%apple-clang@16.0.0 build_system=autotools libs=shared,static arch=darwin-sequoia-m1
[+]          ^gdbm@1.23%apple-clang@16.0.0 build_system=autotools arch=darwin-sequoia-m1
[+]              ^readline@8.2%apple-clang@16.0.0 build_system=autotools patches=bbf97f1 arch=darwin-sequoia-m1
[+]                  ^ncurses@6.5%apple-clang@16.0.0~symlinks+termlib abi=none build_system=autotools patches=7a351bc arch=darwin-sequoia-m1
[+]                      ^pkgconf@2.2.0%apple-clang@16.0.0 build_system=autotools arch=darwin-sequoia-m1
[+]      ^zlib-ng@2.2.1%apple-clang@16.0.0+compat+new_strategies+opt+pic+shared build_system=autotools arch=darwin-sequoia-m1
[+]          ^gnuconfig@2022-09-17%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
[+]  py-six@1.16.0%apple-clang@16.0.0 build_system=python_pip arch=darwin-sequoia-m1
[+]      ^py-pip@23.1.2%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
[+]      ^py-setuptools@69.2.0%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
[-]      ^py-wheel@0.41.2%apple-clang@16.0.0 build_system=generic arch=darwin-sequoia-m1
...
```

With no input spec displayed -- just the concretization output shown as one consolidated
tree and multiple roots.

- [x] remove "Input Spec" section and "Concretized" header from `spack spec` output
- [x] print concretized specs as one BFS tree instead of multiple

---------

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-11-14 08:16:16 +01:00
psakievich
020e30f3e6 Update tutorial version (#47593) 2024-11-14 08:15:37 +01:00
Harmen Stoppels
181c404af5 missing and redundant imports (#47577) 2024-11-13 13:03:29 +01:00
9823 changed files with 58517 additions and 65256 deletions

View File

@@ -66,7 +66,7 @@ jobs:
./share/spack/qa/validate_last_exit.ps1
spack -d audit externals
./share/spack/qa/validate_last_exit.ps1
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
if: ${{ inputs.with_coverage == 'true' && runner.os != 'Windows' }}
with:
name: coverage-audits-${{ matrix.system.os }}

View File

@@ -1,3 +1,5 @@
# (c) 2022 Lawrence Livermore National Laboratory
git config --global user.email "spack@example.com"
git config --global user.name "Test User"
git config --global core.longpaths true

View File

@@ -161,7 +161,11 @@ jobs:
source share/spack/setup-env.sh
spack -d gpg list
tree $HOME/.spack/bootstrap/store/
- name: Bootstrap File
run: |
source share/spack/setup-env.sh
spack -d python share/spack/qa/bootstrap-file.py
tree $HOME/.spack/bootstrap/store/
windows:
runs-on: "windows-latest"
@@ -192,3 +196,9 @@ jobs:
spack -d gpg list
./share/spack/qa/validate_last_exit.ps1
tree $env:userprofile/.spack/bootstrap/store/
- name: Bootstrap File
run: |
./share/spack/setup-env.ps1
spack -d python share/spack/qa/bootstrap-file.py
./share/spack/qa/validate_last_exit.ps1
tree $env:userprofile/.spack/bootstrap/store/

View File

@@ -40,30 +40,24 @@ jobs:
# 1: Platforms to build for
# 2: Base image (e.g. ubuntu:22.04)
dockerfile: [[amazon-linux, 'linux/amd64,linux/arm64', 'amazonlinux:2'],
[centos-stream9, 'linux/amd64,linux/arm64', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64', 'almalinux:9'],
[centos-stream9, 'linux/amd64,linux/arm64,linux/ppc64le', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
[rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
[rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
[fedora39, 'linux/amd64,linux/arm64', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64', 'fedora:40']]
[fedora39, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:40']]
name: Build ${{ matrix.dockerfile[0] }}
if: github.repository == 'spack/spack'
steps:
- name: Checkout
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Determine latest release tag
id: latest
run: |
git fetch --quiet --tags
echo "tag=$(git tag --list --sort=-v:refname | grep -E '^v[0-9]+\.[0-9]+\.[0-9]+$' | head -n 1)" | tee -a $GITHUB_OUTPUT
- uses: docker/metadata-action@369eb591f429131d6889c46b94e711f089e6ca96
- uses: docker/metadata-action@8e5442c4ef9f78752691e2d8f8d19755c6f78e81
id: docker_meta
with:
images: |
@@ -77,7 +71,6 @@ jobs:
type=semver,pattern={{major}}
type=ref,event=branch
type=ref,event=pr
type=raw,value=latest,enable=${{ github.ref == format('refs/tags/{0}', steps.latest.outputs.tag) }}
- name: Generate the Dockerfile
env:
@@ -94,7 +87,7 @@ jobs:
fi
- name: Upload Dockerfile
uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: dockerfiles_${{ matrix.dockerfile[0] }}
path: dockerfiles
@@ -103,7 +96,7 @@ jobs:
uses: docker/setup-qemu-action@49b3bc8e6bdd4a60e6116a5414239cba5943d3cf
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@6524bf65af31da8d45b59e8c27de4bd072b392f5
uses: docker/setup-buildx-action@c47758b77c9736f4b2ef4073d4d51994fabfe349
- name: Log in to GitHub Container Registry
uses: docker/login-action@9780b0c442fbb1117ed29e0efdff1e18412f7567
@@ -120,7 +113,7 @@ jobs:
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Build & Deploy ${{ matrix.dockerfile[0] }}
uses: docker/build-push-action@48aba3b46d1b1fec4febb7c5d0c644b249a11355
uses: docker/build-push-action@4f58ea79222b3b9dc2c8bbdd6debcef730109a75
with:
context: dockerfiles/${{ matrix.dockerfile[0] }}
platforms: ${{ matrix.dockerfile[1] }}
@@ -133,7 +126,7 @@ jobs:
needs: deploy-images
steps:
- name: Merge Artifacts
uses: actions/upload-artifact/merge@6f51ac03b9356f520e9adb1b1b7802705f340c2b
uses: actions/upload-artifact/merge@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: dockerfiles
pattern: dockerfiles_*

View File

@@ -9,7 +9,6 @@ on:
branches:
- develop
- releases/**
merge_group:
concurrency:
group: ci-${{github.ref}}-${{github.event.pull_request.number || github.run_number}}
@@ -26,17 +25,13 @@ jobs:
packages: ${{ steps.filter.outputs.packages }}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
if: ${{ github.event_name == 'push' || github.event_name == 'merge_group' }}
if: ${{ github.event_name == 'push' }}
with:
fetch-depth: 0
# For pull requests it's not necessary to checkout the code
- uses: dorny/paths-filter@de90cc6fb38fc0963ad72b210f1f284cd68cea36
id: filter
with:
# For merge group events, compare against the target branch (main)
base: ${{ github.event_name == 'merge_group' && github.event.merge_group.base_ref || '' }}
# For merge group events, use the merge group head ref
ref: ${{ github.event_name == 'merge_group' && github.event.merge_group.head_sha || github.ref }}
# See https://github.com/dorny/paths-filter/issues/56 for the syntax used below
# Don't run if we only modified packages in the
# built-in repository or documentation
@@ -81,15 +76,10 @@ jobs:
prechecks:
needs: [ changes ]
uses: ./.github/workflows/prechecks.yml
uses: ./.github/workflows/valid-style.yml
secrets: inherit
with:
with_coverage: ${{ needs.changes.outputs.core }}
with_packages: ${{ needs.changes.outputs.packages }}
import-check:
needs: [ changes ]
uses: ./.github/workflows/import-check.yaml
all-prechecks:
needs: [ prechecks ]
@@ -99,7 +89,7 @@ jobs:
- name: Success
run: |
if [ "${{ needs.prechecks.result }}" == "failure" ] || [ "${{ needs.prechecks.result }}" == "canceled" ]; then
echo "Unit tests failed."
echo "Unit tests failed."
exit 1
else
exit 0
@@ -107,7 +97,6 @@ jobs:
coverage:
needs: [ unit-tests, prechecks ]
if: ${{ needs.changes.outputs.core }}
uses: ./.github/workflows/coverage.yml
secrets: inherit
@@ -120,10 +109,10 @@ jobs:
- name: Status summary
run: |
if [ "${{ needs.unit-tests.result }}" == "failure" ] || [ "${{ needs.unit-tests.result }}" == "canceled" ]; then
echo "Unit tests failed."
echo "Unit tests failed."
exit 1
elif [ "${{ needs.bootstrap.result }}" == "failure" ] || [ "${{ needs.bootstrap.result }}" == "canceled" ]; then
echo "Bootstrap tests failed."
echo "Bootstrap tests failed."
exit 1
else
exit 0

View File

@@ -29,8 +29,6 @@ jobs:
- run: coverage xml
- name: "Upload coverage report to CodeCov"
uses: codecov/codecov-action@1e68e06f1dbfde0e4cefc87efeba9e4643565303
uses: codecov/codecov-action@b9fd7d16f6d7d1b5d2bec1a2887e65ceed900238
with:
verbose: true
fail_ci_if_error: false
token: ${{ secrets.CODECOV_TOKEN }}

View File

@@ -1,49 +0,0 @@
name: import-check
on:
workflow_call:
jobs:
# Check we don't make the situation with circular imports worse
import-check:
runs-on: ubuntu-latest
steps:
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: 4cdb0bf15f04ab6b49041d5ef1bfd9644cce7f33
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Circular import check
working-directory: circular-import-fighter
run: make -j compare "SPACK_ROOT=../old ../new"

View File

@@ -1,7 +1,7 @@
black==25.1.0
black==24.10.0
clingo==5.7.1
flake8==7.1.2
isort==6.0.1
mypy==1.15.0
types-six==1.17.0.20250304
flake8==7.1.1
isort==5.13.2
mypy==1.8.0
types-six==1.16.21.20241105
vermin==1.6.0

View File

@@ -15,17 +15,17 @@ jobs:
strategy:
matrix:
os: [ubuntu-latest]
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12']
on_develop:
- ${{ github.ref == 'refs/heads/develop' }}
include:
- python-version: '3.6'
os: ubuntu-20.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
- python-version: '3.7'
os: ubuntu-22.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
exclude:
- python-version: '3.7'
os: ubuntu-latest
on_develop: false
- python-version: '3.8'
os: ubuntu-latest
on_develop: false
@@ -52,13 +52,7 @@ jobs:
# Needed for unit tests
sudo apt-get -y install \
coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build \
cmake bison libbison-dev subversion
# On ubuntu 24.04, kcov was removed. It may come back in some future Ubuntu
- name: Set up Homebrew
id: set-up-homebrew
uses: Homebrew/actions/setup-homebrew@40e9946c182a64b3db1bf51be0dcb915f7802aa9
- name: Install kcov with brew
run: "brew install kcov"
cmake bison libbison-dev kcov
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov
@@ -86,7 +80,7 @@ jobs:
UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
run: |
share/spack/qa/run-unit-tests
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-${{ matrix.os }}-python${{ matrix.python-version }}
path: coverage
@@ -105,13 +99,7 @@ jobs:
run: |
sudo apt-get -y update
# Needed for shell tests
sudo apt-get install -y coreutils csh zsh tcsh fish dash bash subversion
# On ubuntu 24.04, kcov was removed. It may come back in some future Ubuntu
- name: Set up Homebrew
id: set-up-homebrew
uses: Homebrew/actions/setup-homebrew@40e9946c182a64b3db1bf51be0dcb915f7802aa9
- name: Install kcov with brew
run: "brew install kcov"
sudo apt-get install -y coreutils kcov csh zsh tcsh fish dash bash
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest coverage[toml] pytest-xdist
@@ -125,7 +113,7 @@ jobs:
COVERAGE: true
run: |
share/spack/qa/run-shell-tests
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-shell
path: coverage
@@ -140,13 +128,13 @@ jobs:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
@@ -187,7 +175,7 @@ jobs:
spack bootstrap status
spack solve zlib
spack unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml lib/spack/spack/test/concretization/core.py
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-clingo-cffi
path: coverage
@@ -225,7 +213,7 @@ jobs:
$(which spack) solve zlib
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
$(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-${{ matrix.os }}-python${{ matrix.python-version }}
path: coverage
@@ -256,7 +244,7 @@ jobs:
run: |
spack unit-test -x --verbose --cov --cov-config=pyproject.toml
./share/spack/qa/validate_last_exit.ps1
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-windows
path: coverage

View File

@@ -1,4 +1,4 @@
name: prechecks
name: style
on:
workflow_call:
@@ -6,9 +6,6 @@ on:
with_coverage:
required: true
type: string
with_packages:
required: true
type: string
concurrency:
group: style-${{github.ref}}-${{github.event.pull_request.number || github.run_number}}
@@ -16,14 +13,15 @@ concurrency:
jobs:
# Validate that the code can be run on all the Python versions supported by Spack
# Validate that the code can be run on all the Python versions
# supported by Spack
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
python-version: '3.11'
cache: 'pip'
- name: Install Python Packages
run: |
@@ -33,7 +31,6 @@ jobs:
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
- name: vermin (Repositories)
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv var/spack/repos
# Run style checks on the files that have been changed
style:
runs-on: ubuntu-latest
@@ -43,7 +40,7 @@ jobs:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
python-version: '3.11'
cache: 'pip'
- name: Install Python packages
run: |
@@ -57,25 +54,12 @@ jobs:
- name: Run style tests
run: |
share/spack/qa/run-style-tests
audit:
uses: ./.github/workflows/audit.yaml
secrets: inherit
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.13'
verify-checksums:
if: ${{ inputs.with_packages == 'true' }}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
with:
fetch-depth: 2
- name: Verify Added Checksums
run: |
bin/spack ci verify-versions HEAD^1 HEAD
python_version: '3.11'
# Check that spack can bootstrap the development environment on Python 3.6 - RHEL8
bootstrap-dev-rhel8:
runs-on: ubuntu-latest
@@ -90,7 +74,7 @@ jobs:
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
@@ -103,21 +87,62 @@ jobs:
spack -d bootstrap now --dev
spack -d style -t black
spack unit-test -V
# Further style checks from pylint
pylint:
import-check:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pylint
- name: Pylint (Spack Core)
run: |
pylint -j 4 --disable=all --enable=unspecified-encoding --ignore-paths=lib/spack/external lib
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: 9f60f51bc7134e0be73f27623f1b0357d1718427
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Import cycles before
working-directory: circular-import-fighter
run: make SPACK_ROOT=../old && cp solution solution.old
- name: Import cycles after
working-directory: circular-import-fighter
run: make clean-graph && make SPACK_ROOT=../new && cp solution solution.new
- name: Compare import cycles
working-directory: circular-import-fighter
run: |
edges_before="$(grep -oP 'edges to delete: \K\d+' solution.old)"
edges_after="$(grep -oP 'edges to delete: \K\d+' solution.new)"
if [ "$edges_after" -gt "$edges_before" ]; then
printf '\033[1;31mImport check failed: %s imports need to be deleted, ' "$edges_after"
printf 'previously this was %s\033[0m\n' "$edges_before"
printf 'Compare \033[1;97m"Import cycles before"\033[0m and '
printf '\033[1;97m"Import cycles after"\033[0m to see problematic imports.\n'
exit 1
else
printf '\033[1;32mImport check passed: %s <= %s\033[0m\n' "$edges_after" "$edges_before"
fi

1
.gitignore vendored
View File

@@ -201,6 +201,7 @@ tramp
# Org-mode
.org-id-locations
*_archive
# flymake-mode
*_flymake.*

View File

@@ -1,3 +1,365 @@
# v0.23.0 (2024-11-13)
`v0.23.0` is a major feature release.
We are planning to make this the last major release before Spack `v1.0`
in June 2025. Alongside `v0.23`, we will be making pre-releases (alpha,
beta, etc.) of `v1.0`, and we encourage users to try them and send us
feedback, either on GitHub or on Slack. You can track the road to
`v1.0` here:
* https://github.com/spack/spack/releases
* https://github.com/spack/spack/discussions/30634
## Features in this Release
1. **Language virtuals**
Your packages can now explicitly depend on the languages they require.
Historically, Spack has considered C, C++, and Fortran compiler
dependencies to be implicit. In `v0.23`, you should ensure that
new packages add relevant C, C++, and Fortran dependencies like this:
```python
depends_on("c", type="build")
depends_on("cxx", type="build")
depends_on("fortran", type="build")
```
We encourage you to add these annotations to your packages now, to prepare
for Spack `v1.0.0`. In `v1.0.0`, these annotations will be necessary for
your package to use C, C++, and Fortran compilers. Note that you should
*not* add language dependencies to packages that don't need them, e.g.,
pure python packages.
We have already auto-generated these dependencies for packages in the
`builtin` repository (see #45217), based on the types of source files
present in each package's source code. We *may* have added too many or too
few language dependencies, so please submit pull requests to correct
packages if you find that the language dependencies are incorrect.
Note that we have also backported support for these dependencies to
`v0.21.3` and `v0.22.2`, to make all of them forward-compatible with
`v0.23`. This should allow you to move easily between older and newer Spack
releases without breaking your packages.
2. **Spec splicing**
We are working to make binary installation more seamless in Spack. `v0.23`
introduces "splicing", which allows users to deploy binaries using local,
optimized versions of a binary interface, even if they were not built with
that interface. For example, this would allow you to build binaries in the
cloud using `mpich` and install them on a system using a local, optimized
version of `mvapich2` *without rebuilding*. Spack preserves full provenance
for the installed packages and knows that they were built one way but
deployed another.
Our intent is to leverage this across many key HPC binary packages,
e.g. MPI, CUDA, ROCm, and libfabric.
Fundamentally, splicing allows Spack to redeploy an existing spec with
different dependencies than how it was built. There are two interfaces to
splicing.
a. Explicit Splicing
#39136 introduced the explicit splicing interface. In the
concretizer config, you can specify a target spec and a replacement
by hash.
```yaml
concretizer:
splice:
explicit:
- target: mpi
replacement: mpich/abcdef
```
Here, every installation that would normally use the target spec will
instead use its replacement. Above, any spec using *any* `mpi` will be
spliced to depend on the specific `mpich` installation requested. This
*can* go wrong if you try to replace something built with, e.g.,
`openmpi` with `mpich`, and it is on the user to ensure ABI
compatibility between target and replacement specs. This currently
requires some expertise to use, but it will allow users to reuse the
binaries they create across more machines and environments.
b. Automatic Splicing (experimental)
#46729 introduced automatic splicing. In the concretizer config, enable
automatic splicing:
```yaml
concretizer:
splice:
automatic: true
```
or run:
```console
spack config add concretizer:splice:automatic:true
```
The concretizer will select splices for ABI compatibility to maximize
package reuse. Packages can denote ABI compatibility using the
`can_splice` directive. No packages in Spack yet use this directive, so
if you want to use this feature you will need to add `can_splice`
annotations to your packages. We are working on ways to add more ABI
compatibility information to the Spack package repository, and this
directive may change in the future.
See the documentation for more details:
* https://spack.readthedocs.io/en/latest/build_settings.html#splicing
* https://spack.readthedocs.io/en/latest/packaging_guide.html#specifying-abi-compatibility
3. Broader variant propagation
Since #42931, you can specify propagated variants like `hdf5
build_type==RelWithDebInfo` or `trilinos ++openmp` to propagate a variant
to all dependencies for which it is relevant. This is valid *even* if the
variant does not exist on the package or its dependencies.
See https://spack.readthedocs.io/en/latest/basic_usage.html#variants.
4. Query specs by namespace
#45416 allows a package's namespace (indicating the repository it came from)
to be treated like a variant. You can request packages from particular repos
like this:
```console
spack find zlib namespace=builtin
spack find zlib namespace=myrepo
```
Previously, the spec syntax only allowed namespaces to be prefixes of spec
names, e.g. `builtin.zlib`. The previous syntax still works.
5. `spack spec` respects environment settings and `unify:true`
`spack spec` did not previously respect environment lockfiles or
unification settings, which made it difficult to see exactly how a spec
would concretize within an environment. Now it does, so the output you get
with `spack spec` will be *the same* as what your environment will
concretize to when you run `spack concretize`. Similarly, if you provide
multiple specs on the command line with `spack spec`, it will concretize
them together if `unify:true` is set.
See #47556 and #44843.
6. Less noisy `spack spec` output
`spack spec` previously showed output like this:
```console
> spack spec /v5fn6xo
Input spec
--------------------------------
- /v5fn6xo
Concretized
--------------------------------
[+] openssl@3.3.1%apple-clang@16.0.0~docs+shared arch=darwin-sequoia-m1
...
```
But the input spec is redundant, and we know we run `spack spec` to concretize
the input spec. `spack spec` now *only* shows the concretized spec. See #47574.
7. Better output for `spack find -c`
In an environmnet, `spack find -c` lets you search the concretized, but not
yet installed, specs, just as you would the installed ones. As with `spack
spec`, this should make it easier for you to see what *will* be built
before building and installing it. See #44713.
8. `spack -C <env>`: use an environment's configuration without activation
Spack environments allow you to associate:
1. a set of (possibly concretized) specs, and
2. configuration
When you activate an environment, you're using both of these. Previously, we
supported:
* `spack -e <env>` to run spack in the context of a specific environment, and
* `spack -C <directory>` to run spack using a directory with configuration files.
You can now also pass an environment to `spack -C` to use *only* the environment's
configuration, but not the specs or lockfile. See #45046.
## New commands, options, and directives
* The new `spack env track` command (#41897) takes a non-managed Spack
environment and adds a symlink to Spack's `$environments_root` directory, so
that it will be included for reference counting for commands like `spack
uninstall` and `spack gc`. If you use free-standing directory environments,
this is useful for preventing Spack from removing things required by your
environments. You can undo this tracking with the `spack env untrack`
command.
* Add `-t` short option for `spack --backtrace` (#47227)
`spack -d / --debug` enables backtraces on error, but it can be very
verbose, and sometimes you just want the backtrace. `spack -t / --backtrace`
provides that option.
* `gc`: restrict to specific specs (#46790)
If you only want to garbage-collect specific packages, you can now provide
them on the command line. This gives users finer-grained control over what
is uninstalled.
* oci buildcaches now support `--only=package`. You can now push *just* a
package and not its dependencies to an OCI registry. This allows dependents
of non-redistributable specs to be stored in OCI registries without an
error. See #45775.
## Notable refactors
* Variants are now fully conditional
The `variants` dictionary on packages was previously keyed by variant name,
and allowed only one definition of any given variant. Spack is now smart
enough to understand that variants may have different values and defaults
for different versions. For example, `warpx` prior to `23.06` only supported
builds for one dimensionality, and newer `warpx` versions could be built
with support for many different dimensions:
```python
variant(
"dims",
default="3",
values=("1", "2", "3", "rz"),
multi=False,
description="Number of spatial dimensions",
when="@:23.05",
)
variant(
"dims",
default="1,2,rz,3",
values=("1", "2", "3", "rz"),
multi=True,
description="Number of spatial dimensions",
when="@23.06:",
)
```
Previously, the default for the old version of `warpx` was not respected and
had to be specified manually. Now, Spack will select the right variant
definition for each version at concretization time. This allows variants to
evolve more smoothly over time. See #44425 for details.
## Highlighted bugfixes
1. Externals no longer override the preferred provider (#45025).
External definitions could interfere with package preferences. Now, if
`openmpi` is the preferred `mpi`, and an external `mpich` is defined, a new
`openmpi` *will* be built if building it is possible. Previously we would
prefer `mpich` despite the preference.
2. Composable `cflags` (#41049).
This release fixes a longstanding bug that concretization would fail if
there were different `cflags` specified in `packages.yaml`,
`compilers.yaml`, or on `the` CLI. Flags and their ordering are now tracked
in the concretizer and flags from multiple sources will be merged.
3. Fix concretizer Unification for included environments (#45139).
## Deprecations, removals, and syntax changes
1. The old concretizer has been removed from Spack, along with the
`config:concretizer` config option. Spack will emit a warning if the option
is present in user configuration, since it now has no effect. Spack now
uses a simpler bootstrapping mechanism, where a JSON prototype is tweaked
slightly to get an initial concrete spec to download. See #45215.
2. Best-effort expansion of spec matrices has been removed. This feature did
not work with the "new" ASP-based concretizer, and did not work with
`unify: True` or `unify: when_possible`. Use the
[exclude key](https://spack.readthedocs.io/en/latest/environments.html#spec-matrices)
for the environment to exclude invalid components, or use multiple spec
matrices to combine the list of specs for which the constraint is valid and
the list of specs for which it is not. See #40792.
3. The old Cray `platform` (based on Cray PE modules) has been removed, and
`platform=cray` is no longer supported. Since `v0.19`, Spack has handled
Cray machines like Linux clusters with extra packages, and we have
encouraged using this option to support Cray. The new approach allows us to
correctly handle Cray machines with non-SLES operating systems, and it is
much more reliable than making assumptions about Cray modules. See the
`v0.19` release notes and #43796 for more details.
4. The `config:install_missing_compilers` config option has been deprecated,
and it is a no-op when set in `v0.23`. Our new compiler dependency model
will replace it with a much more reliable and robust mechanism in `v1.0`.
See #46237.
5. Config options that deprecated in `v0.21` have been removed in `v0.23`. You
can now only specify preferences for `compilers`, `targets`, and
`providers` globally via the `packages:all:` section. Similarly, you can
only specify `versions:` locally for a specific package. See #44061 and
#31261 for details.
6. Spack's old test interface has been removed (#45752), having been
deprecated in `v0.22.0` (#34236). All `builtin` packages have been updated
to use the new interface. See the [stand-alone test documentation](
https://spack.readthedocs.io/en/latest/packaging_guide.html#stand-alone-tests)
7. The `spack versions --safe-only` option, deprecated since `v0.21.0`, has
been removed. See #45765.
* The `--dependencies` and `--optimize` arguments to `spack ci` have been
deprecated. See #45005.
## Binary caches
1. Public binary caches now include an ML stack for Linux/aarch64 (#39666)We
now build an ML stack for Linux/aarch64 for all pull requests and on
develop. The ML stack includes both CPU-only and CUDA builds for Horovod,
Hugging Face, JAX, Keras, PyTorch,scikit-learn, TensorBoard, and
TensorFlow, and related packages. The CPU-only stack also includes XGBoost.
See https://cache.spack.io/tag/develop/?stack=ml-linux-aarch64-cuda.
2. There is also now an stack of developer tools for macOS (#46910), which is
analogous to the Linux devtools stack. You can use this to avoid building
many common build dependencies. See
https://cache.spack.io/tag/develop/?stack=developer-tools-darwin.
## Architecture support
* archspec has been updated to `v0.2.5`, with support for `zen5`
* Spack's CUDA package now supports the Grace Hopper `9.0a` compute capability (#45540)
## Windows
* Windows bootstrapping: `file` and `gpg` (#41810)
* `scripts` directory added to PATH on Windows for python extensions (#45427)
* Fix `spack load --list` and `spack unload` on Windows (#35720)
## Other notable changes
* Bugfix: `spack find -x` in environments (#46798)
* Spec splices are now robust to duplicate nodes with the same name in a spec (#46382)
* Cache per-compiler libc calculations for performance (#47213)
* Fixed a bug in external detection for openmpi (#47541)
* Mirror configuration allows username/password as environment variables (#46549)
* Default library search caps maximum depth (#41945)
* Unify interface for `spack spec` and `spack solve` commands (#47182)
* Spack no longer RPATHs directories in the default library search path (#44686)
* Improved performance of Spack database (#46554)
* Enable package reuse for packages with versions from git refs (#43859)
* Improved handling for `uuid` virtual on macos (#43002)
* Improved tracking of task queueing/requeueing in the installer (#46293)
## Spack community stats
* Over 2,000 pull requests updated package recipes
* 8,307 total packages, 329 new since `v0.22.0`
* 140 new Python packages
* 14 new R packages
* 373 people contributed to this release
* 357 committers to packages
* 60 committers to core
# v0.22.2 (2024-09-21)
## Bugfixes
@@ -419,7 +781,7 @@
- spack graph: fix coloring with environments (#41240)
- spack info: sort variants in --variants-by-name (#41389)
- Spec.format: error on old style format strings (#41934)
- ASP-based solver:
- ASP-based solver:
- fix infinite recursion when computing concretization errors (#41061)
- don't error for type mismatch on preferences (#41138)
- don't emit spurious debug output (#41218)

View File

@@ -8,9 +8,8 @@ or http://www.apache.org/licenses/LICENSE-2.0) or the MIT license,
Copyrights and patents in the Spack project are retained by contributors.
No copyright assignment is required to contribute to Spack.
Spack was originally developed in 2013 by Lawrence Livermore National
Security, LLC. It was originally distributed under the LGPL-2.1 license.
Consent from contributors to relicense to Apache-2.0/MIT is documented at
Spack was originally distributed under the LGPL-2.1 license. Consent from
contributors to relicense to Apache-2.0/MIT is documented at
https://github.com/spack/spack/issues/9137.
@@ -103,6 +102,6 @@ PackageName: sbang
PackageHomePage: https://github.com/spack/sbang
PackageLicenseDeclared: Apache-2.0 OR MIT
PackageName: typing_extensions
PackageHomePage: https://pypi.org/project/typing-extensions/
PackageLicenseDeclared: Python-2.0
PackageName: six
PackageHomePage: https://pypi.python.org/pypi/six
PackageLicenseDeclared: MIT

View File

@@ -1,6 +1,6 @@
MIT License
Copyright (c) Spack Project Developers.
Copyright (c) 2013-2024 LLNS, LLC and other Spack Project Developers.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal

View File

@@ -70,7 +70,7 @@ Tutorial
----------------
We maintain a
[**hands-on tutorial**](https://spack-tutorial.readthedocs.io/).
[**hands-on tutorial**](https://spack.readthedocs.io/en/latest/tutorial.html).
It covers basic to advanced usage, packaging, developer features, and large HPC
deployments. You can do all of the exercises on your own laptop using a
Docker container.

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import subprocess

View File

@@ -1,6 +1,7 @@
#!/bin/sh
#
# Copyright sbang project developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# sbang project developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,7 +1,8 @@
#!/bin/sh
# -*- python -*-
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -25,6 +26,7 @@ exit 1
# The code above runs this file with our preferred python interpreter.
import os
import os.path
import sys
min_python3 = (3, 6)

View File

@@ -1,6 +1,7 @@
#!/bin/sh
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
:: Copyright Spack Project Developers. See COPYRIGHT file for details.
:: Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
:: Spack Project Developers. See the top-level COPYRIGHT file for details.
::
:: SPDX-License-Identifier: (Apache-2.0 OR MIT)
::#######################################################################

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
# #######################################################################

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -43,28 +43,6 @@ concretizer:
# (e.g. py-setuptools, cmake etc.)
# "full" (experimental): allows separation of the entire build-tool stack (e.g. the entire "cmake" subDAG)
strategy: minimal
# Maximum number of duplicates in a DAG, when using a strategy that allows duplicates. "default" is the
# number used if there isn't a more specific alternative
max_dupes:
default: 1
# Virtuals
c: 2
cxx: 2
fortran: 1
# Regular packages
cmake: 2
gmake: 2
python: 2
python-venv: 2
py-cython: 2
py-flit-core: 2
py-pip: 2
py-setuptools: 2
py-wheel: 2
xcb-proto: 2
# Compilers
gcc: 2
llvm: 2
# Option to specify compatibility between operating systems for reuse of compilers and packages
# Specified as a key: [list] where the key is the os that is being targeted, and the list contains the OS's
# it can reuse. Note this is a directional compatibility so mutual compatibility between two OS's
@@ -77,15 +55,3 @@ concretizer:
splice:
explicit: []
automatic: false
# Maximum time, in seconds, allowed for the 'solve' phase. If set to 0, there is no time limit.
timeout: 0
# If set to true, exceeding the timeout will always result in a concretization error. If false,
# the best (suboptimal) model computed before the timeout is used.
#
# Setting this to false yields unreproducible results, so we advise to use that value only
# for debugging purposes (e.g. check which constraints can help Spack concretize faster).
error_on_timeout: true
# Static analysis may reduce the concretization time by generating smaller ASP problems, in
# cases where there are requirements that prevent part of the search space to be explored.
static_analysis: false

View File

@@ -19,7 +19,7 @@ config:
install_tree:
root: $spack/opt/spack
projections:
all: "{architecture.platform}-{architecture.target}/{name}-{version}-{hash}"
all: "{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}"
# install_tree can include an optional padded length (int or boolean)
# default is False (do not pad)
# if padded_length is True, Spack will pad as close to the system max path
@@ -194,12 +194,6 @@ config:
# executables with many dependencies, in particular on slow filesystems.
bind: false
# Controls the handling of missing dynamic libraries after installation.
# Options are ignore (default), warn, or error. If set to error, the
# installation fails if installed binaries reference dynamic libraries that
# are not found in their specified rpaths.
missing_library_policy: ignore
# Set to 'false' to allow installation on filesystems that doesn't allow setgid bit
# manipulation by unprivileged user (e.g. AFS)

View File

@@ -15,11 +15,12 @@
# -------------------------------------------------------------------------
packages:
all:
compiler:
- apple-clang
- clang
- gcc
providers:
c: [apple-clang, llvm, gcc]
cxx: [apple-clang, llvm, gcc]
elf: [libelf]
fortran: [gcc]
fuse: [macfuse]
gl: [apple-gl]
glu: [apple-glu]
@@ -49,12 +50,3 @@ packages:
# although the version number used here isn't critical
- spec: apple-libuuid@1353.100.2
prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
c:
prefer:
- apple-clang
cxx:
prefer:
- apple-clang
fortran:
prefer:
- gcc

View File

@@ -15,18 +15,19 @@
# -------------------------------------------------------------------------
packages:
all:
compiler: [gcc, clang, oneapi, xl, nag, fj, aocc]
providers:
awk: [gawk]
armci: [armcimpi]
blas: [openblas, amdblis]
c: [gcc, llvm, intel-oneapi-compilers]
cxx: [gcc, llvm, intel-oneapi-compilers]
c: [gcc]
cxx: [gcc]
D: [ldc]
daal: [intel-oneapi-daal]
elf: [elfutils]
fftw-api: [fftw, amdfftw]
flame: [libflame, amdlibflame]
fortran: [gcc, llvm, intel-oneapi-compilers]
fortran: [gcc]
fortran-rt: [gcc-runtime, intel-oneapi-runtime]
fuse: [libfuse]
gl: [glx, osmesa]
@@ -35,7 +36,7 @@ packages:
go-or-gccgo-bootstrap: [go-bootstrap, gcc]
iconv: [libiconv]
ipp: [intel-oneapi-ipp]
java: [openjdk, jdk]
java: [openjdk, jdk, ibm-java]
jpeg: [libjpeg-turbo, libjpeg]
lapack: [openblas, amdlibflame]
libc: [glibc, musl]
@@ -64,7 +65,6 @@ packages:
unwind: [libunwind]
uuid: [util-linux-uuid, libuuid]
wasi-sdk: [wasi-sdk-prebuilt]
xkbdata-api: [xkeyboard-config, xkbdata]
xxd: [xxd-standalone, vim]
yacc: [bison, byacc]
ziglang: [zig]
@@ -72,27 +72,13 @@ packages:
permissions:
read: world
write: user
cray-fftw:
buildable: false
cray-libsci:
buildable: false
cray-mpich:
buildable: false
cray-mvapich2:
buildable: false
cray-pmi:
buildable: false
egl:
buildable: false
essl:
buildable: false
fujitsu-mpi:
buildable: false
fujitsu-ssl2:
buildable: false
hpcx-mpi:
buildable: false
mpt:
buildable: false
spectrum-mpi:
buildable: false

View File

@@ -1,5 +1,5 @@
config:
locks: false
build_stage::
- '$user_cache_path/stage'
- '$spack/.staging'
stage_name: '{name}-{version}-{hash:7}'

View File

@@ -15,8 +15,8 @@
# -------------------------------------------------------------------------
packages:
all:
compiler:
- msvc
providers:
c : [msvc]
cxx: [msvc]
mpi: [msmpi]
gl: [wgl]

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -1761,24 +1762,19 @@ Verifying installations
The ``spack verify`` command can be used to verify the validity of
Spack-installed packages any time after installation.
^^^^^^^^^^^^^^^^^^^^^^^^^
``spack verify manifest``
^^^^^^^^^^^^^^^^^^^^^^^^^
At installation time, Spack creates a manifest of every file in the
installation prefix. For links, Spack tracks the mode, ownership, and
destination. For directories, Spack tracks the mode, and
ownership. For files, Spack tracks the mode, ownership, modification
time, hash, and size. The ``spack verify manifest`` command will check,
for every file in each package, whether any of those attributes have
changed. It will also check for newly added files or deleted files from
the installation prefix. Spack can either check all installed packages
time, hash, and size. The Spack verify command will check, for every
file in each package, whether any of those attributes have changed. It
will also check for newly added files or deleted files from the
installation prefix. Spack can either check all installed packages
using the `-a,--all` or accept specs listed on the command line to
verify.
The ``spack verify manifest`` command can also verify for individual files
that they haven't been altered since installation time. If the given file
The ``spack verify`` command can also verify for individual files that
they haven't been altered since installation time. If the given file
is not in a Spack installation prefix, Spack will report that it is
not owned by any package. To check individual files instead of specs,
use the ``-f,--files`` option.
@@ -1793,22 +1789,6 @@ check only local packages (as opposed to those used transparently from
``upstream`` spack instances) and the ``-j,--json`` option to output
machine-readable json data for any errors.
^^^^^^^^^^^^^^^^^^^^^^^^^^
``spack verify libraries``
^^^^^^^^^^^^^^^^^^^^^^^^^^
The ``spack verify libraries`` command can be used to verify that packages
do not have accidental system dependencies. This command scans the install
prefixes of packages for executables and shared libraries, and resolves
their needed libraries in their RPATHs. When needed libraries cannot be
located, an error is reported. This typically indicates that a package
was linked against a system library, instead of a library provided by
a Spack package.
This verification can also be enabled as a post-install hook by setting
``config:shared_linking:missing_library_policy`` to ``error`` or ``warn``
in :ref:`config.yaml <config-yaml>`.
-----------------------
Filesystem requirements
-----------------------

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -264,30 +265,25 @@ infrastructure, or to cache Spack built binaries in Github Actions and
GitLab CI.
To get started, configure an OCI mirror using ``oci://`` as the scheme,
and optionally specify variables that hold the username and password (or
personal access token) for the registry:
and optionally specify a username and password (or personal access token):
.. code-block:: console
$ spack mirror add --oci-username-variable REGISTRY_USER \
--oci-password-variable REGISTRY_TOKEN \
my_registry oci://example.com/my_image
$ spack mirror add --oci-username username --oci-password password my_registry oci://example.com/my_image
Spack follows the naming conventions of Docker, with Dockerhub as the default
registry. To use Dockerhub, you can omit the registry domain:
.. code-block:: console
$ spack mirror add ... my_registry oci://username/my_image
$ spack mirror add --oci-username username --oci-password password my_registry oci://username/my_image
From here, you can use the mirror as any other build cache:
.. code-block:: console
$ export REGISTRY_USER=...
$ export REGISTRY_TOKEN=...
$ spack buildcache push my_registry <specs...> # push to the registry
$ spack install <specs...> # or install from the registry
$ spack install <specs...> # install from the registry
A unique feature of buildcaches on top of OCI registries is that it's incredibly
easy to generate get a runnable container image with the binaries installed. This

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -170,7 +171,7 @@ bootstrapping.
To register the mirror on the platform where it's supposed to be used run the following command(s):
% spack bootstrap add --trust local-sources /opt/bootstrap/metadata/sources
% spack bootstrap add --trust local-binaries /opt/bootstrap/metadata/binaries
% spack buildcache update-index /opt/bootstrap/bootstrap_cache
This command needs to be run on a machine with internet access and the resulting folder
has to be moved over to the air-gapped system. Once the local sources are added using the

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -63,6 +64,7 @@ on these ideas for each distinct build system that Spack supports:
build_systems/cudapackage
build_systems/custompackage
build_systems/inteloneapipackage
build_systems/intelpackage
build_systems/rocmpackage
build_systems/sourceforgepackage

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -272,9 +273,9 @@ often lists dependencies and the flags needed to locate them. The
"environment variables" section lists environment variables that the
build system uses to pass flags to the compiler and linker.
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^
Addings flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^^
For most of the flags you encounter, you will want a variant to
optionally enable/disable them. You can then optionally pass these
@@ -285,7 +286,7 @@ function like so:
def configure_args(self):
args = []
...
if self.spec.satisfies("+mpi"):
args.append("--enable-mpi")
else:
@@ -299,10 +300,7 @@ Alternatively, you can use the :ref:`enable_or_disable <autotools_enable_or_dis
.. code-block:: python
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("mpi"))
return args
return [self.enable_or_disable("mpi")]
Note that we are explicitly disabling MPI support if it is not
@@ -347,14 +345,7 @@ typically used to enable or disable some feature within the package.
default=False,
description="Memchecker support for debugging [degrades performance]"
)
...
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("memchecker"))
return args
config_args.extend(self.enable_or_disable("memchecker"))
In this example, specifying the variant ``+memchecker`` will generate
the following configuration options:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -56,13 +57,13 @@ If you look at the ``perl`` package, you'll see:
.. code-block:: python
phases = ("configure", "build", "install")
phases = ["configure", "build", "install"]
Similarly, ``cmake`` defines:
.. code-block:: python
phases = ("bootstrap", "build", "install")
phases = ["bootstrap", "build", "install"]
If we look at the ``cmake`` example, this tells Spack's ``PackageBase``
class to run the ``bootstrap``, ``build``, and ``install`` functions

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -33,6 +34,9 @@ For more information on a specific package, do::
spack info --all <package-name>
Intel no longer releases new versions of Parallel Studio, which can be
used in Spack via the :ref:`intelpackage`. All of its components can
now be found in oneAPI.
Examples
========
@@ -47,8 +51,34 @@ Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so spack can use them::
To build the ``patchelf`` Spack package with ``icx``, do::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
Verify that the compilers are available::
spack compiler list
Note that 2024 and later releases do not include ``icc``. Before 2024,
the package layout was different::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
The ``intel-oneapi-compilers`` package includes 2 families of
compilers:
* ``intel``: ``icc``, ``icpc``, ``ifort``. Intel's *classic*
compilers. 2024 and later releases contain ``ifort``, but not
``icc`` and ``icpc``.
* ``oneapi``: ``icx``, ``icpx``, ``ifx``. Intel's new generation of
compilers based on LLVM.
To build the ``patchelf`` Spack package with ``icc``, do::
spack install patchelf%intel
To build with with ``icx``, do ::
spack install patchelf%oneapi
@@ -63,6 +93,15 @@ Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so Spack can use them::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
Verify that the compilers are available::
spack compiler list
Clone `spack-configs <https://github.com/spack/spack-configs>`_ repo and activate Intel oneAPI CPU environment::
git clone https://github.com/spack/spack-configs
@@ -111,7 +150,7 @@ Compilers
---------
To use the compilers, add some information about the installation to
``packages.yaml``. For most users, it is sufficient to do::
``compilers.yaml``. For most users, it is sufficient to do::
spack compiler add /opt/intel/oneapi/compiler/latest/bin
@@ -119,7 +158,7 @@ Adapt the paths above if you did not install the tools in the default
location. After adding the compilers, using them is the same
as if you had installed the ``intel-oneapi-compilers`` package.
Another option is to manually add the configuration to
``packages.yaml`` as described in :ref:`Compiler configuration
``compilers.yaml`` as described in :ref:`Compiler configuration
<compiler-config>`.
Before 2024, the directory structure was different::
@@ -162,5 +201,15 @@ You can also use Spack-installed libraries. For example::
Will update your environment CPATH, LIBRARY_PATH, and other
environment variables for building an application with oneMKL.
More information
================
This section describes basic use of oneAPI, especially if it has
changed compared to Parallel Studio. See :ref:`intelpackage` for more
information on :ref:`intel-virtual-packages`,
:ref:`intel-unrelated-packages`,
:ref:`intel-integrating-external-libraries`, and
:ref:`using-mkl-tips`.
.. _`Intel installers`: https://software.intel.com/content/www/us/en/develop/documentation/installation-guide-for-intel-oneapi-toolkits-linux/top.html

File diff suppressed because it is too large Load Diff

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -24,14 +25,6 @@ QMake does not appear to have a standardized way of specifying
the installation directory, so you may have to set environment
variables or edit ``*.pro`` files to get things working properly.
QMake packages will depend on the virtual ``qmake`` package which
is provided by multiple versions of Qt: ``qt`` provides Qt up to
Qt5, and ``qt-base`` provides Qt from version Qt6 onwards. This
split was motivated by the desire to split the single Qt package
into its components to allow for more fine-grained installation.
To depend on a specific version, refer to the documentation on
:ref:`virtual-dependencies`.
^^^^^^
Phases
^^^^^^

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -12,7 +13,8 @@ The ``ROCmPackage`` is not a build system but a helper package. Like ``CudaPacka
it provides standard variants, dependencies, and conflicts to facilitate building
packages using GPUs though for AMD in this case.
You can find the source for this package (and suggestions for setting up your ``packages.yaml`` file) at
You can find the source for this package (and suggestions for setting up your
``compilers.yaml`` and ``packages.yaml`` files) at
`<https://github.com/spack/spack/blob/develop/lib/spack/spack/build_systems/rocm.py>`__.
^^^^^^^^

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -209,7 +210,7 @@ def setup(sphinx):
# Spack classes that are private and we don't want to expose
("py:class", "spack.provider_index._IndexBase"),
("py:class", "spack.repo._PrependFileLoader"),
("py:class", "spack.build_systems._checks.BuilderWithDefaults"),
("py:class", "spack.build_systems._checks.BaseBuilder"),
# Spack classes that intersphinx is unable to resolve
("py:class", "spack.version.StandardVersion"),
("py:class", "spack.spec.DependencySpec"),
@@ -223,10 +224,6 @@ def setup(sphinx):
("py:class", "spack.compiler.CompilerCache"),
# TypeVar that is not handled correctly
("py:class", "llnl.util.lang.T"),
("py:class", "llnl.util.lang.KT"),
("py:class", "llnl.util.lang.VT"),
("py:obj", "llnl.util.lang.KT"),
("py:obj", "llnl.util.lang.VT"),
]
# The reST default role (used for this markup: `text`) to use for all documents.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -25,23 +26,14 @@ These settings can be overridden in ``etc/spack/config.yaml`` or
The location where Spack will install packages and their dependencies.
Default is ``$spack/opt/spack``.
---------------
``projections``
---------------
---------------------------------------------------
``install_hash_length`` and ``install_path_scheme``
---------------------------------------------------
.. warning::
Modifying projections of the install tree is strongly discouraged.
By default Spack installs all packages into a unique directory relative to the install
tree root with the following layout:
.. code-block::
{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}
In very rare cases, it may be necessary to reduce the length of this path. For example,
very old versions of the Intel compiler are known to segfault when input paths are too long:
The default Spack installation path can be very long and can create problems
for scripts with hardcoded shebangs. Additionally, when using the Intel
compiler, and if there is also a long list of dependencies, the compiler may
segfault. If you see the following:
.. code-block:: console
@@ -49,25 +41,36 @@ very old versions of the Intel compiler are known to segfault when input paths a
** Segmentation violation signal raised. **
Access violation or stack overflow. Please contact Intel Support for assistance.
Another case is Python and R packages with many runtime dependencies, which can result
in very large ``PYTHONPATH`` and ``R_LIBS`` environment variables. This can cause the
``execve`` system call to fail with ``E2BIG``, preventing processes from starting.
it may be because variables containing dependency specs may be too long. There
are two parameters to help with long path names. Firstly, the
``install_hash_length`` parameter can set the length of the hash in the
installation path from 1 to 32. The default path uses the full 32 characters.
For this reason, Spack allows users to modify the installation layout through custom
projections. For example
Secondly, it is also possible to modify the entire installation
scheme. By default Spack uses
``{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}``
where the tokens that are available for use in this directive are the
same as those understood by the :meth:`~spack.spec.Spec.format`
method. Using this parameter it is possible to use a different package
layout or reduce the depth of the installation paths. For example
.. code-block:: yaml
config:
install_tree:
root: $spack/opt/spack
projections:
all: "{name}/{version}/{hash:16}"
install_path_scheme: '{name}/{version}/{hash:7}'
would install packages into sub-directories using only the package name, version and a
hash length of 16 characters.
would install packages into sub-directories using only the package
name, version and a hash length of 7 characters.
Notice that reducing the hash length increases the likelihood of hash collisions.
When using either parameter to set the hash length it only affects the
representation of the hash in the installation directory. You
should be aware that the smaller the hash length the more likely
naming conflicts will occur. These parameters are independent of those
used to configure module names.
.. warning:: Modifying the installation hash length or path scheme after
packages have been installed will prevent Spack from being
able to find the old installation directories.
--------------------
``build_stage``
@@ -125,8 +128,6 @@ are stored in ``$spack/var/spack/cache``. These are stored indefinitely
by default. Can be purged with :ref:`spack clean --downloads
<cmd-spack-clean>`.
.. _Misc Cache:
--------------------
``misc_cache``
--------------------
@@ -336,52 +337,3 @@ create a new alias called ``inst`` that will always call ``install -v``:
aliases:
inst: install -v
-------------------------------
``concretization_cache:enable``
-------------------------------
When set to ``true``, Spack will utilize a cache of solver outputs from
successful concretization runs. When enabled, Spack will check the concretization
cache prior to running the solver. If a previous request to solve a given
problem is present in the cache, Spack will load the concrete specs and other
solver data from the cache rather than running the solver. Specs not previously
concretized will be added to the cache on a successful solve. The cache additionally
holds solver statistics, so commands like ``spack solve`` will still return information
about the run that produced a given solver result.
This cache is a subcache of the :ref:`Misc Cache` and as such will be cleaned when the Misc
Cache is cleaned.
When ``false`` or ommitted, all concretization requests will be performed from scatch
----------------------------
``concretization_cache:url``
----------------------------
Path to the location where Spack will root the concretization cache. Currently this only supports
paths on the local filesystem.
Default location is under the :ref:`Misc Cache` at: ``$misc_cache/concretization``
------------------------------------
``concretization_cache:entry_limit``
------------------------------------
Sets a limit on the number of concretization results that Spack will cache. The limit is evaluated
after each concretization run; if Spack has stored more results than the limit allows, the
oldest concretization results are pruned until 10% of the limit has been removed.
Setting this value to 0 disables the automatic pruning. It is expected users will be
responsible for maintaining this cache.
-----------------------------------
``concretization_cache:size_limit``
-----------------------------------
Sets a limit on the size of the concretization cache in bytes. The limit is evaluated
after each concretization run; if Spack has stored more results than the limit allows, the
oldest concretization results are pruned until 10% of the limit has been removed.
Setting this value to 0 disables the automatic pruning. It is expected users will be
responsible for maintaining this cache.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -11,10 +12,9 @@ Configuration Files
Spack has many configuration files. Here is a quick list of them, in
case you want to skip directly to specific docs:
* :ref:`packages.yaml <compiler-config>`
* :ref:`compilers.yaml <compiler-config>`
* :ref:`concretizer.yaml <concretizer-options>`
* :ref:`config.yaml <config-yaml>`
* :ref:`include.yaml <include-yaml>`
* :ref:`mirrors.yaml <mirrors>`
* :ref:`modules.yaml <modules>`
* :ref:`packages.yaml <packages-config>`
@@ -95,7 +95,7 @@ are six configuration scopes. From lowest to highest:
precedence over all other scopes.
Each configuration directory may contain several configuration files,
such as ``config.yaml``, ``packages.yaml``, or ``mirrors.yaml``. When
such as ``config.yaml``, ``compilers.yaml``, or ``mirrors.yaml``. When
configurations conflict, settings from higher-precedence scopes override
lower-precedence settings.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -37,11 +38,9 @@ just have to configure and OCI registry and run ``spack buildcache push``.
spack -e . install
# Configure the registry
spack -e . mirror add --oci-username-variable REGISTRY_USER \
--oci-password-variable REGISTRY_TOKEN \
container-registry oci://example.com/name/image
spack -e . mirror add --oci-username ... --oci-password ... container-registry oci://example.com/name/image
# Push the image (do set REGISTRY_USER and REGISTRY_TOKEN)
# Push the image
spack -e . buildcache push --update-index --base-image ubuntu:22.04 --tag my_env container-registry
The resulting container image can then be run as follows:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -361,6 +362,7 @@ and the tags associated with the class of runners to build on.
* ``.linux_neoverse_n1``
* ``.linux_neoverse_v1``
* ``.linux_neoverse_v2``
* ``.linux_power``
* ``.linux_skylake``
* ``.linux_x86_64``
* ``.linux_x86_64_v4``

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -177,8 +178,8 @@ Spec-related modules
Contains :class:`~spack.spec.Spec`. Also implements most of the logic for concretization
of specs.
:mod:`spack.spec_parser`
Contains :class:`~spack.spec_parser.SpecParser` and functions related to parsing specs.
:mod:`spack.parser`
Contains :class:`~spack.parser.SpecParser` and functions related to parsing specs.
:mod:`spack.version`
Implements a simple :class:`~spack.version.Version` class with simple
@@ -543,10 +544,10 @@ With either interpreter you can run a single command:
.. code-block:: console
$ spack python -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -c 'from spack.spec import Spec; Spec("python").concretized()'
...
$ spack python -i ipython -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -i ipython -c 'from spack.spec import Spec; Spec("python").concretized()'
Out[1]: ...
or a file:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -112,19 +113,6 @@ the original but may concretize differently in the presence of different
explicit or default configuration settings (e.g., a different version of
Spack or for a different user account).
Environments created from a manifest will copy any included configs
from relative paths inside the environment. Relative paths from
outside the environment will cause errors, and absolute paths will be
kept absolute. For example, if ``spack.yaml`` includes:
.. code-block:: yaml
spack:
include: [./config.yaml]
then the created environment will have its own copy of the file
``config.yaml`` copied from the location in the original environment.
Create an environment from a ``spack.lock`` file using:
.. code-block:: console
@@ -173,7 +161,7 @@ accepts. If an environment already exists then spack will simply activate it
and ignore the create-specific flags.
.. code-block:: console
$ spack env activate --create -p myenv
# ...
# [creates if myenv does not exist yet]
@@ -437,8 +425,8 @@ Developing Packages in a Spack Environment
The ``spack develop`` command allows one to develop Spack packages in
an environment. It requires a spec containing a concrete version, and
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will automatically pick the highest version the package has defined.
This means any infinity versions (``develop``, ``main``, ``stable``) will be
preferred in this selection process.
@@ -448,22 +436,15 @@ set, and Spack will ensure the package and its dependents are rebuilt
any time the environment is installed if the package's local source
code has been modified. Spack's native implementation to check for modifications
is to check if ``mtime`` is newer than the installation.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
Spack ensures that all instances of a
developed package in the environment are concretized to match the
version (and other constraints) passed as the spec argument to the
``spack develop`` command.
When working deep in the graph it is often desirable to have multiple specs marked
as ``develop`` so you don't have to restage and/or do full rebuilds each time you
call ``spack install``. The ``--recursive`` flag can be used in these scenarios
to ensure that all the dependents of the initial spec you provide are also marked
as develop specs. The ``--recursive`` flag requires a pre-concretized environment
so the graph can be traversed from the supplied spec all the way to the root specs.
For packages with ``git`` attributes, git branches, tags, and commits can
also be used as valid concrete versions (see :ref:`version-specifier`).
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
@@ -473,7 +454,7 @@ Further development on ``foo`` can be tested by re-installing the environment,
and eventually committed and pushed to the upstream git repo.
If the package being developed supports out-of-source builds then users can use the
``--build_directory`` flag to control the location and name of the build directory.
``--build_directory`` flag to control the location and name of the build directory.
This is a shortcut to set the ``package_attributes:build_directory`` in the
``packages`` configuration (see :ref:`assigning-package-attributes`).
The supplied location will become the build-directory for that package in all future builds.
@@ -677,45 +658,24 @@ This configuration sets the default compiler for all packages to
Included configurations
^^^^^^^^^^^^^^^^^^^^^^^
Spack environments allow an ``include`` heading in their yaml schema.
This heading pulls in external configuration files and applies them to
the environment.
Spack environments allow an ``include`` heading in their yaml
schema. This heading pulls in external configuration files and applies
them to the environment.
.. code-block:: yaml
spack:
include:
- environment/relative/path/to/config.yaml
- https://github.com/path/to/raw/config/packages.yaml
- relative/path/to/config.yaml
- https://github.com/path/to/raw/config/compilers.yaml
- /absolute/path/to/packages.yaml
- path: /path/to/$os/$target/environment
optional: true
- path: /path/to/os-specific/config-dir
when: os == "ventura"
Included configuration files are required *unless* they are explicitly optional
or the entry's condition evaluates to ``false``. Optional includes are specified
with the ``optional`` clause and conditional with the ``when`` clause. (See
:ref:`include-yaml` for more information on optional and conditional entries.)
Files are listed using paths to individual files or directories containing them.
Path entries may be absolute or relative to the environment or specified as
URLs. URLs to individual files need link to the **raw** form of the file's
contents (e.g., `GitHub
<https://docs.github.com/en/repositories/working-with-files/using-files/viewing-and-understanding-files#viewing-or-copying-the-raw-file-content>`_
or `GitLab
<https://docs.gitlab.com/ee/api/repository_files.html#get-raw-file-from-repository>`_).
Only the ``file``, ``ftp``, ``http`` and ``https`` protocols (or schemes) are
supported. Spack-specific, environment and user path variables can be used.
(See :ref:`config-file-variables` for more information.)
.. warning::
Recursive includes are not currently processed in a breadth-first manner
so the value of a configuration option that is altered by multiple included
files may not be what you expect. This will be addressed in a future
update.
Environments can include files or URLs. File paths can be relative or
absolute. URLs include the path to the text for individual files or
can be the path to a directory containing configuration files.
Spack supports ``file``, ``http``, ``https`` and ``ftp`` protocols (or
schemes). Spack-specific, environment and user path variables may be
used in these paths. See :ref:`config-file-variables` for more information.
^^^^^^^^^^^^^^^^^^^^^^^^
Configuration precedence
@@ -1082,7 +1042,7 @@ file snippet we define a view named ``mpis``, rooted at
``/path/to/view`` in which all projections use the package name,
version, and compiler name to determine the path for a given
package. This view selects all packages that depend on MPI, and
excludes those built with the GCC compiler at version 18.5.
excludes those built with the PGI compiler at version 18.5.
The root specs with their (transitive) link and run type dependencies
will be put in the view due to the ``link: all`` option,
and the files in the view will be symlinks to the spack install
@@ -1096,7 +1056,7 @@ directories.
mpis:
root: /path/to/view
select: [^mpi]
exclude: ['%gcc@18.5']
exclude: ['%pgi@18.5']
projections:
all: '{name}/{version}-{compiler.name}'
link: all

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -30,7 +31,7 @@ than always choosing the latest versions or default variants.
.. note::
As a rule of thumb: requirements + constraints > strong preferences > reuse > preferences > defaults.
As a rule of thumb: requirements + constraints > reuse > preferences > defaults.
The following set of criteria (from lowest to highest precedence) explain
common cases where concretization output may seem surprising at first.
@@ -56,19 +57,7 @@ common cases where concretization output may seem surprising at first.
concretizer:
reuse: dependencies # other options are 'true' and 'false'
3. :ref:`Strong preferences <package-strong-preferences>` configured in ``packages.yaml``
are higher priority than reuse, and can be used to strongly prefer a specific version
or variant, without erroring out if it's not possible. Strong preferences are specified
as follows:
.. code-block:: yaml
packages:
foo:
prefer:
- "@1.1: ~mpi"
4. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
3. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
and constraints from the command line as well as ``package.py`` files override all
of the above. Requirements are specified as follows:
@@ -78,8 +67,6 @@ common cases where concretization output may seem surprising at first.
foo:
require:
- "@1.2: +mpi"
conflicts:
- "@1.4"
Requirements and constraints restrict the set of possible solutions, while reuse
behavior and preferences influence what an optimal solution looks like.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -34,7 +35,7 @@ A build matrix showing which packages are working on which systems is shown belo
.. code-block:: console
apt update
apt install bzip2 ca-certificates g++ gcc gfortran git gzip lsb-release patch python3 tar unzip xz-utils zstd
apt install bzip2 ca-certificates file g++ gcc gfortran git gzip lsb-release patch python3 tar unzip xz-utils zstd
.. tab-item:: RHEL
@@ -147,22 +148,20 @@ The first time you concretize a spec, Spack will bootstrap automatically:
--------------------------------
zlib@1.2.13%gcc@9.4.0+optimize+pic+shared build_system=makefile arch=linux-ubuntu20.04-icelake
The default bootstrap behavior is to use pre-built binaries. You can verify the
active bootstrap repositories with:
.. command-output:: spack bootstrap list
If for security concerns you cannot bootstrap ``clingo`` from pre-built
binaries, you have to disable fetching the binaries we generated with Github Actions.
.. code-block:: console
$ spack bootstrap disable github-actions-v0.6
==> "github-actions-v0.6" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.5
==> "github-actions-v0.5" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.4
==> "github-actions-v0.4" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.3
==> "github-actions-v0.3" is now disabled and will not be used for bootstrapping
You can verify that the new settings are effective with:
.. command-output:: spack bootstrap list
You can verify that the new settings are effective with ``spack bootstrap list``.
.. note::
@@ -254,11 +253,12 @@ directory.
Compiler configuration
----------------------
Spack has the ability to build packages with multiple compilers and compiler versions.
Compilers can be made available to Spack by specifying them manually in ``packages.yaml``,
or automatically by running ``spack compiler find``.
For convenience, Spack will automatically detect compilers the first time it needs them,
if none is available.
Spack has the ability to build packages with multiple compilers and
compiler versions. Compilers can be made available to Spack by
specifying them manually in ``compilers.yaml`` or ``packages.yaml``,
or automatically by running ``spack compiler find``, but for
convenience Spack will automatically detect compilers the first time
it needs them.
.. _cmd-spack-compilers:
@@ -273,11 +273,20 @@ compilers`` or ``spack compiler list``:
$ spack compilers
==> Available compilers
-- gcc ubuntu20.04-x86_64 ---------------------------------------
gcc@9.4.0 gcc@8.4.0 gcc@10.5.0
-- llvm ubuntu20.04-x86_64 --------------------------------------
llvm@12.0.0 llvm@11.0.0 llvm@10.0.0
-- gcc ---------------------------------------------------------
gcc@4.9.0 gcc@4.8.0 gcc@4.7.0 gcc@4.6.2 gcc@4.4.7
gcc@4.8.2 gcc@4.7.1 gcc@4.6.3 gcc@4.6.1 gcc@4.1.2
-- intel -------------------------------------------------------
intel@15.0.0 intel@14.0.0 intel@13.0.0 intel@12.1.0 intel@10.0
intel@14.0.3 intel@13.1.1 intel@12.1.5 intel@12.0.4 intel@9.1
intel@14.0.2 intel@13.1.0 intel@12.1.3 intel@11.1
intel@14.0.1 intel@13.0.1 intel@12.1.2 intel@10.1
-- clang -------------------------------------------------------
clang@3.4 clang@3.3 clang@3.2 clang@3.1
-- pgi ---------------------------------------------------------
pgi@14.3-0 pgi@13.2-0 pgi@12.1-0 pgi@10.9-0 pgi@8.0-1
pgi@13.10-0 pgi@13.1-1 pgi@11.10-0 pgi@10.2-0 pgi@7.1-3
pgi@13.6-0 pgi@12.8-0 pgi@11.1-0 pgi@9.0-4 pgi@7.0-6
Any of these compilers can be used to build Spack packages. More on
how this is done is in :ref:`sec-specs`.
@@ -296,22 +305,16 @@ An alias for ``spack compiler find``.
``spack compiler find``
^^^^^^^^^^^^^^^^^^^^^^^
If you do not see a compiler in the list shown by:
Lists the compilers currently available to Spack. If you do not see
a compiler in this list, but you want to use it with Spack, you can
simply run ``spack compiler find`` with the path to where the
compiler is installed. For example:
.. code-block:: console
$ spack compiler list
but you want to use it with Spack, you can simply run ``spack compiler find`` with the
path to where the compiler is installed. For example:
.. code-block:: console
$ spack compiler find /opt/intel/oneapi/compiler/2025.1/bin/
==> Added 1 new compiler to /home/user/.spack/packages.yaml
intel-oneapi-compilers@2025.1.0
==> Compilers are defined in the following files:
/home/user/.spack/packages.yaml
$ spack compiler find /usr/local/tools/ic-13.0.079
==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
intel@13.0.079
Or you can run ``spack compiler find`` with no arguments to force
auto-detection. This is useful if you do not know where compilers are
@@ -322,7 +325,7 @@ installed, but you know that new compilers have been added to your
$ module load gcc/4.9.0
$ spack compiler find
==> Added 1 new compiler to /home/user/.spack/packages.yaml
==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
gcc@4.9.0
This loads the environment module for gcc-4.9.0 to add it to
@@ -331,7 +334,7 @@ This loads the environment module for gcc-4.9.0 to add it to
.. note::
By default, spack does not fill in the ``modules:`` field in the
``packages.yaml`` file. If you are using a compiler from a
``compilers.yaml`` file. If you are using a compiler from a
module, then you should add this field manually.
See the section on :ref:`compilers-requiring-modules`.
@@ -341,82 +344,91 @@ This loads the environment module for gcc-4.9.0 to add it to
``spack compiler info``
^^^^^^^^^^^^^^^^^^^^^^^
If you want to see additional information on some specific compilers, you can run ``spack compiler info`` on it:
If you want to see specifics on a particular compiler, you can run
``spack compiler info`` on it:
.. code-block:: console
$ spack compiler info gcc
gcc@=8.4.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc-8
cxx: /usr/bin/g++-8
fortran: /usr/bin/gfortran-8
$ spack compiler info intel@15
intel@15.0.0:
paths:
cc = /usr/local/bin/icc-15.0.090
cxx = /usr/local/bin/icpc-15.0.090
f77 = /usr/local/bin/ifort-15.0.090
fc = /usr/local/bin/ifort-15.0.090
modules = []
operating_system = centos6
...
gcc@=9.4.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc
cxx: /usr/bin/g++
fortran: /usr/bin/gfortran
gcc@=10.5.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
This shows the details of the compilers that were detected by Spack.
Notice also that we didn't have to be too specific about the version. We just said ``gcc``, and we got information
about all the matching compilers.
This shows which C, C++, and Fortran compilers were detected by Spack.
Notice also that we didn't have to be too specific about the
version. We just said ``intel@15``, and information about the only
matching Intel compiler was displayed.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Manual compiler configuration
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
If auto-detection fails, you can manually configure a compiler by editing your ``~/.spack/packages.yaml`` file.
You can do this by running ``spack config edit packages``, which will open the file in
If auto-detection fails, you can manually configure a compiler by
editing your ``~/.spack/<platform>/compilers.yaml`` file. You can do this by running
``spack config edit compilers``, which will open the file in
:ref:`your favorite editor <controlling-the-editor>`.
Each compiler has an "external" entry in the file with some ``extra_attributes``:
Each compiler configuration in the file looks like this:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/local/bin/icc-15.0.024-beta
cxx: /usr/local/bin/icpc-15.0.024-beta
f77: /usr/local/bin/ifort-15.0.024-beta
fc: /usr/local/bin/ifort-15.0.024-beta
spec: intel@15.0.0
The compiler executables are listed under ``extra_attributes:compilers``, and are keyed by language.
Once you save the file, the configured compilers will show up in the list displayed by ``spack compilers``.
For compilers that do not support Fortran (like ``clang``), put
``None`` for ``f77`` and ``fc``:
You can also add compiler flags to manually configured compilers. These flags should be specified in the
``flags`` section of the compiler specification. The valid flags are ``cflags``, ``cxxflags``, ``fflags``,
.. code-block:: yaml
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/bin/clang
cxx: /usr/bin/clang++
f77: None
fc: None
spec: clang@3.3svn
Once you save the file, the configured compilers will show up in the
list displayed by ``spack compilers``.
You can also add compiler flags to manually configured compilers. These
flags should be specified in the ``flags`` section of the compiler
specification. The valid flags are ``cflags``, ``cxxflags``, ``fflags``,
``cppflags``, ``ldflags``, and ``ldlibs``. For example:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
flags:
cflags: -O3 -fPIC
cxxflags: -O3 -fPIC
cppflags: -O3 -fPIC
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/bin/gcc
cxx: /usr/bin/g++
f77: /usr/bin/gfortran
fc: /usr/bin/gfortran
flags:
cflags: -O3 -fPIC
cxxflags: -O3 -fPIC
cppflags: -O3 -fPIC
spec: gcc@4.7.2
These flags will be treated by spack as if they were entered from
the command line each time this compiler is used. The compiler wrappers
@@ -431,44 +443,95 @@ These variables should be specified in the ``environment`` section of the compil
specification. The operations available to modify the environment are ``set``, ``unset``,
``prepend_path``, ``append_path``, and ``remove_path``. For example:
.. code-block:: yaml
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /opt/intel/oneapi/compiler/latest/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/latest/linux/bin/icpx
f77: /opt/intel/oneapi/compiler/latest/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/latest/linux/bin/ifx
spec: oneapi@latest
environment:
set:
MKL_ROOT: "/path/to/mkl/root"
unset: # A list of environment variables to unset
- CC
prepend_path: # Similar for append|remove_path
LD_LIBRARY_PATH: /ld/paths/added/by/setvars/sh
.. note::
Spack is in the process of moving compilers from a separate
attribute to be handled like all other packages. As part of this
process, the ``compilers.yaml`` section will eventually be replaced
by configuration in the ``packages.yaml`` section. This new
configuration is now available, although it is not yet the default
behavior.
Compilers can also be configured as external packages in the
``packages.yaml`` config file. Any external package for a compiler
(e.g. ``gcc`` or ``llvm``) will be treated as a configured compiler
assuming the paths to the compiler executables are determinable from
the prefix.
If the paths to the compiler executable are not determinable from the
prefix, you can add them to the ``extra_attributes`` field. Similarly,
all other fields from the compilers config can be added to the
``extra_attributes`` field for an external representing a compiler.
Note that the format for the ``paths`` field in the
``extra_attributes`` section is different than in the ``compilers``
config. For compilers configured as external packages, the section is
named ``compilers`` and the dictionary maps language names (``c``,
``cxx``, ``fortran``) to paths, rather than using the names ``cc``,
``fc``, and ``f77``.
.. code-block:: yaml
packages:
intel-oneapi-compilers:
externals:
- spec: intel-oneapi-compilers@2025.1.0
prefix: /opt/intel/oneapi
gcc:
external:
- spec: gcc@12.2.0 arch=linux-rhel8-skylake
prefix: /usr
extra_attributes:
compilers:
c: /opt/intel/oneapi/compiler/2025.1/bin/icx
cxx: /opt/intel/oneapi/compiler/2025.1/bin/icpx
fortran: /opt/intel/oneapi/compiler/2025.1/bin/ifx
environment:
set:
MKL_ROOT: "/path/to/mkl/root"
unset: # A list of environment variables to unset
- CC
prepend_path: # Similar for append|remove_path
LD_LIBRARY_PATH: /ld/paths/added/by/setvars/sh
GCC_ROOT: /usr
external:
- spec: llvm+clang@15.0.0 arch=linux-rhel8-skylake
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/clang-with-suffix
cxx: /usr/bin/clang++-with-extra-info
fortran: /usr/bin/gfortran
extra_rpaths:
- /usr/lib/llvm/
^^^^^^^^^^^^^^^^^^^^^^^
Build Your Own Compiler
^^^^^^^^^^^^^^^^^^^^^^^
If you are particular about which compiler/version you use, you might wish to have Spack build it for you.
For example:
If you are particular about which compiler/version you use, you might
wish to have Spack build it for you. For example:
.. code-block:: console
$ spack install gcc@14+binutils
$ spack install gcc@4.9.3
Once the compiler is installed, you can start using it without additional configuration:
Once that has finished, you will need to add it to your
``compilers.yaml`` file. You can then set Spack to use it by default
by adding the following to your ``packages.yaml`` file:
.. code-block:: console
.. code-block:: yaml
$ spack install hdf5~mpi %gcc@14
The same holds true for compilers that are made available from buildcaches, when reusing them is allowed.
packages:
all:
compiler: [gcc@4.9.3]
.. _compilers-requiring-modules:
@@ -476,26 +539,30 @@ The same holds true for compilers that are made available from buildcaches, when
Compilers Requiring Modules
^^^^^^^^^^^^^^^^^^^^^^^^^^^
Many installed compilers will work regardless of the environment they are called with.
However, some installed compilers require environment variables to be set in order to run;
this is typical for Intel and other proprietary compilers.
Many installed compilers will work regardless of the environment they
are called with. However, some installed compilers require
``$LD_LIBRARY_PATH`` or other environment variables to be set in order
to run; this is typical for Intel and other proprietary compilers.
On typical HPC clusters, these environment modifications are usually delegated to some "module" system.
In such a case, you should tell Spack which module(s) to load in order to run the chosen compiler:
In such a case, you should tell Spack which module(s) to load in order
to run the chosen compiler (If the compiler does not come with a
module file, you might consider making one by hand). Spack will load
this module into the environment ONLY when the compiler is run, and
NOT in general for a package's ``install()`` method. See, for
example, this ``compilers.yaml`` file:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /opt/compilers
extra_attributes:
compilers:
c: /opt/compilers/bin/gcc-10
cxx: /opt/compilers/bin/g++-10
fortran: /opt/compilers/bin/gfortran-10
modules: [gcc/10.5.0]
compilers:
- compiler:
modules: [other/comp/gcc-5.3-sp3]
operating_system: SuSE11
paths:
cc: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gcc
cxx: /usr/local/other/SLES11.3/gcc/5.3.0/bin/g++
f77: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gfortran
fc: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gfortran
spec: gcc@5.3.0
Some compilers require special environment settings to be loaded not just
to run, but also to execute the code they build, breaking packages that
@@ -516,7 +583,7 @@ Licensed Compilers
^^^^^^^^^^^^^^^^^^
Some proprietary compilers require licensing to use. If you need to
use a licensed compiler, the process is similar to a mix of
use a licensed compiler (eg, PGI), the process is similar to a mix of
build your own, plus modules:
#. Create a Spack package (if it doesn't exist already) to install
@@ -526,21 +593,24 @@ build your own, plus modules:
using Spack to load the module it just created, and running simple
builds (eg: ``cc helloWorld.c && ./a.out``)
#. Add the newly-installed compiler to ``packages.yaml`` as shown above.
#. Add the newly-installed compiler to ``compilers.yaml`` as shown
above.
.. _mixed-toolchains:
^^^^^^^^^^^^^^^^^^^^^^^^^^
Fortran compilers on macOS
^^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^
Mixed Toolchains
^^^^^^^^^^^^^^^^
Modern compilers typically come with related compilers for C, C++ and
Fortran bundled together. When possible, results are best if the same
compiler is used for all languages.
In some cases, this is not possible. For example, XCode on macOS provides no Fortran compilers.
The user is therefore forced to use a mixed toolchain: XCode-provided Clang for C/C++ and e.g.
GNU ``gfortran`` for Fortran.
In some cases, this is not possible. For example, starting with macOS El
Capitan (10.11), many packages no longer build with GCC, but XCode
provides no Fortran compilers. The user is therefore forced to use a
mixed toolchain: XCode-provided Clang for C/C++ and GNU ``gfortran`` for
Fortran.
#. You need to make sure that Xcode is installed. Run the following command:
@@ -593,25 +663,45 @@ GNU ``gfortran`` for Fortran.
Note: the flag is ``-license``, not ``--license``.
#. Run ``spack compiler find`` to locate Clang.
#. There are different ways to get ``gfortran`` on macOS. For example, you can
install GCC with Spack (``spack install gcc``), with Homebrew (``brew install
gcc``), or from a `DMG installer
<https://github.com/fxcoudert/gfortran-for-macOS/releases>`_.
#. Run ``spack compiler find`` to locate both Apple-Clang and GCC.
#. The only thing left to do is to edit ``~/.spack/darwin/compilers.yaml`` to provide
the path to ``gfortran``:
Since languages in Spack are modeled as virtual packages, ``apple-clang`` will be used to provide
C and C++, while GCC will be used for Fortran.
.. code-block:: yaml
compilers:
- compiler:
# ...
paths:
cc: /usr/bin/clang
cxx: /usr/bin/clang++
f77: /path/to/bin/gfortran
fc: /path/to/bin/gfortran
spec: apple-clang@11.0.0
If you used Spack to install GCC, you can get the installation prefix by
``spack location -i gcc`` (this will only work if you have a single version
of GCC installed). Whereas for Homebrew, GCC is installed in
``/usr/local/Cellar/gcc/x.y.z``. With the DMG installer, the correct path
will be ``/usr/local/gfortran``.
^^^^^^^^^^^^^^^^^^^^^
Compiler Verification
^^^^^^^^^^^^^^^^^^^^^
You can verify that your compilers are configured properly by installing a simple package. For example:
You can verify that your compilers are configured properly by installing a
simple package. For example:
.. code-block:: console
$ spack install zlib-ng%gcc@5.3.0
$ spack install zlib%gcc@5.3.0
.. _vendor-specific-compiler-configuration:
@@ -620,7 +710,9 @@ You can verify that your compilers are configured properly by installing a simpl
Vendor-Specific Compiler Configuration
--------------------------------------
This section provides details on how to get vendor-specific compilers working.
With Spack, things usually "just work" with GCC. Not so for other
compilers. This section provides details on how to get specific
compilers working.
^^^^^^^^^^^^^^^
Intel Compilers
@@ -642,8 +734,8 @@ compilers:
you have installed from the ``PATH`` environment variable.
If you want use a version of ``gcc`` or ``g++`` other than the default
version on your system, you need to use either the ``--gcc-install-dir``
or ``--gcc-toolchain`` compiler option to specify the path to the version of
version on your system, you need to use either the ``-gcc-name``
or ``-gxx-name`` compiler option to specify the path to the version of
``gcc`` or ``g++`` that you want to use."
-- `Intel Reference Guide <https://software.intel.com/en-us/node/522750>`_
@@ -651,12 +743,135 @@ compilers:
Intel compilers may therefore be configured in one of two ways with
Spack: using modules, or using compiler flags.
""""""""""""""""""""""""""
Configuration with Modules
""""""""""""""""""""""""""
One can control which GCC is seen by the Intel compiler with modules.
A module must be loaded both for the Intel Compiler (so it will run)
and GCC (so the compiler can find the intended GCC). The following
configuration in ``compilers.yaml`` illustrates this technique:
.. code-block:: yaml
compilers:
- compiler:
modules: [gcc-4.9.3, intel-15.0.24]
operating_system: centos7
paths:
cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta
cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta
f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
spec: intel@15.0.24.4.9.3
.. note::
The version number on the Intel compiler is a combination of
the "native" Intel version number and the GNU compiler it is
targeting.
""""""""""""""""""""""""""
Command Line Configuration
""""""""""""""""""""""""""
One can also control which GCC is seen by the Intel compiler by adding
flags to the ``icc`` command:
#. Identify the location of the compiler you just installed:
.. code-block:: console
$ spack location --install-dir gcc
~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw...
#. Set up ``compilers.yaml``, for example:
.. code-block:: yaml
compilers:
- compiler:
modules: [intel-15.0.24]
operating_system: centos7
paths:
cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta
cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta
f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
flags:
cflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
cxxflags: -gxx-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/g++
fflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
spec: intel@15.0.24.4.9.3
^^^
PGI
^^^
PGI comes with two sets of compilers for C++ and Fortran,
distinguishable by their names. "Old" compilers:
.. code-block:: yaml
cc: /soft/pgi/15.10/linux86-64/15.10/bin/pgcc
cxx: /soft/pgi/15.10/linux86-64/15.10/bin/pgCC
f77: /soft/pgi/15.10/linux86-64/15.10/bin/pgf77
fc: /soft/pgi/15.10/linux86-64/15.10/bin/pgf90
"New" compilers:
.. code-block:: yaml
cc: /soft/pgi/15.10/linux86-64/15.10/bin/pgcc
cxx: /soft/pgi/15.10/linux86-64/15.10/bin/pgc++
f77: /soft/pgi/15.10/linux86-64/15.10/bin/pgfortran
fc: /soft/pgi/15.10/linux86-64/15.10/bin/pgfortran
Older installations of PGI contains just the old compilers; whereas
newer installations contain the old and the new. The new compiler is
considered preferable, as some packages
(``hdf``) will not build with the old compiler.
When auto-detecting a PGI compiler, there are cases where Spack will
find the old compilers, when you really want it to find the new
compilers. It is best to check this ``compilers.yaml``; and if the old
compilers are being used, change ``pgf77`` and ``pgf90`` to
``pgfortran``.
Other issues:
* There are reports that some packages will not build with PGI,
including ``libpciaccess`` and ``openssl``. A workaround is to
build these packages with another compiler and then use them as
dependencies for PGI-build packages. For example:
.. code-block:: console
$ spack install openmpi%pgi ^libpciaccess%gcc
* PGI requires a license to use; see :ref:`licensed-compilers` for more
information on installation.
.. note::
It is believed the problem with HDF 4 is that everything is
compiled with the ``F77`` compiler, but at some point some Fortran
90 code slipped in there. So compilers that can handle both FORTRAN
77 and Fortran 90 (``gfortran``, ``pgfortran``, etc) are fine. But
compilers specific to one or the other (``pgf77``, ``pgf90``) won't
work.
^^^
NAG
^^^
The Numerical Algorithms Group provides a licensed Fortran compiler.
It is recommended to use GCC for your C/C++ compilers.
The Numerical Algorithms Group provides a licensed Fortran compiler. Like Clang,
this requires you to set up a :ref:`mixed-toolchains`. It is recommended to use
GCC for your C/C++ compilers.
The NAG Fortran compilers are a bit more strict than other compilers, and many
packages will fail to install with error messages like:
@@ -673,40 +888,44 @@ the command line:
$ spack install openmpi fflags="-mismatch"
Or it can be set permanently in your ``packages.yaml``:
Or it can be set permanently in your ``compilers.yaml``:
.. code-block:: yaml
packages:
nag:
externals:
- spec: nag@6.1
prefix: /opt/nag/bin
extra_attributes:
compilers:
fortran: /opt/nag/bin/nagfor
flags:
fflags: -mismatch
- compiler:
modules: []
operating_system: centos6
paths:
cc: /soft/spack/opt/spack/linux-x86_64/gcc-5.3.0/gcc-6.1.0-q2zosj3igepi3pjnqt74bwazmptr5gpj/bin/gcc
cxx: /soft/spack/opt/spack/linux-x86_64/gcc-5.3.0/gcc-6.1.0-q2zosj3igepi3pjnqt74bwazmptr5gpj/bin/g++
f77: /soft/spack/opt/spack/linux-x86_64/gcc-4.4.7/nag-6.1-jt3h5hwt5myezgqguhfsan52zcskqene/bin/nagfor
fc: /soft/spack/opt/spack/linux-x86_64/gcc-4.4.7/nag-6.1-jt3h5hwt5myezgqguhfsan52zcskqene/bin/nagfor
flags:
fflags: -mismatch
spec: nag@6.1
---------------
System Packages
---------------
Once compilers are configured, one needs to determine which pre-installed system packages,
if any, to use in builds. These are also configured in the ``~/.spack/packages.yaml`` file.
For example, to use an OpenMPI installed in /opt/local, one would use:
Once compilers are configured, one needs to determine which
pre-installed system packages, if any, to use in builds. This is
configured in the file ``~/.spack/packages.yaml``. For example, to use
an OpenMPI installed in /opt/local, one would use:
.. code-block:: yaml
packages:
openmpi:
buildable: False
externals:
- spec: openmpi@1.10.1
prefix: /opt/local
packages:
openmpi:
externals:
- spec: openmpi@1.10.1
prefix: /opt/local
buildable: False
In general, *Spack is easier to use and more reliable if it builds all of its own dependencies*.
However, there are several packages for which one commonly needs to use system versions:
In general, Spack is easier to use and more reliable if it builds all of
its own dependencies. However, there are several packages for which one
commonly needs to use system versions:
^^^
MPI
@@ -719,7 +938,8 @@ you are unlikely to get a working MPI from Spack. Instead, use an
appropriate pre-installed MPI.
If you choose a pre-installed MPI, you should consider using the
pre-installed compiler used to build that MPI.
pre-installed compiler used to build that MPI; see above on
``compilers.yaml``.
^^^^^^^
OpenSSL
@@ -1169,7 +1389,6 @@ Required:
* Microsoft Visual Studio
* Python
* Git
* 7z
Optional:
* Intel Fortran (needed for some packages)
@@ -1235,13 +1454,6 @@ as the project providing Git support on Windows. This is additionally the recomm
for installing Git on Windows, a link to which can be found above. Spack requires the
utilities vendored by this project.
"""
7zip
"""
A tool for extracting ``.xz`` files is required for extracting source tarballs. The latest 7zip
can be located at https://sourceforge.net/projects/sevenzip/.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Step 2: Install and setup Spack
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -1283,9 +1495,9 @@ To configure Spack, first run the following command inside the Spack console:
spack compiler find
This creates a ``.staging`` directory in our Spack prefix, along with a ``windows`` subdirectory
containing a ``packages.yaml`` file. On a fresh Windows install with the above packages
containing a ``compilers.yaml`` file. On a fresh Windows install with the above packages
installed, this command should only detect Microsoft Visual Studio and the Intel Fortran
compiler will be integrated within the first version of MSVC present in the ``packages.yaml``
compiler will be integrated within the first version of MSVC present in the ``compilers.yaml``
output.
Spack provides a default ``config.yaml`` file for Windows that it will use unless overridden.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,51 +0,0 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _include-yaml:
===============================
Include Settings (include.yaml)
===============================
Spack allows you to include configuration files through ``include.yaml``.
Using the ``include:`` heading results in pulling in external configuration
information to be used by any Spack command.
Included configuration files are required *unless* they are explicitly optional
or the entry's condition evaluates to ``false``. Optional includes are specified
with the ``optional`` clause and conditional with the ``when`` clause. For
example,
.. code-block:: yaml
include:
- /path/to/a/required/config.yaml
- path: /path/to/$os/$target/config
optional: true
- path: /path/to/os-specific/config-dir
when: os == "ventura"
shows all three. The first entry, ``/path/to/a/required/config.yaml``,
indicates that included ``config.yaml`` file is required (so must exist).
Use of ``optional: true`` for ``/path/to/$os/$target/config`` means
the path is only included if it exists. The condition ``os == "ventura"``
in the ``when`` clause for ``/path/to/os-specific/config-dir`` means the
path is only included when the operating system (``os``) is ``ventura``.
The same conditions and variables in `Spec List References
<https://spack.readthedocs.io/en/latest/environments.html#spec-list-references>`_
can be used for conditional activation in the ``when`` clauses.
Included files can be specified by path or by their parent directory.
Paths may be absolute, relative (to the configuration file including the path),
or specified as URLs. Only the ``file``, ``ftp``, ``http`` and ``https`` protocols (or
schemes) are supported. Spack-specific, environment and user path variables
can be used. (See :ref:`config-file-variables` for more information.)
.. warning::
Recursive includes are not currently processed in a breadth-first manner
so the value of a configuration option that is altered by multiple included
files may not be what you expect. This will be addressed in a future
update.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -71,7 +72,6 @@ or refer to the full manual below.
configuration
config_yaml
include_yaml
packages_yaml
build_settings
environments

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -456,13 +457,14 @@ For instance, the following config options,
tcl:
all:
suffixes:
^python@3: 'python{^python.version.up_to_2}'
^python@3: 'python{^python.version}'
^openblas: 'openblas'
will add a ``python3.12`` to module names of packages compiled with Python 3.12, and similarly for
all specs depending on ``python@3``. This is useful to know which version of Python a set of Python
extensions is associated with. Likewise, the ``openblas`` string is attached to any program that
has openblas in the spec, most likely via the ``+blas`` variant specification.
will add a ``python-3.12.1`` version string to any packages compiled with
Python matching the spec, ``python@3``. This is useful to know which
version of Python a set of Python extensions is associated with. Likewise, the
``openblas`` string is attached to any program that has openblas in the spec,
most likely via the ``+blas`` variant specification.
The most heavyweight solution to module naming is to change the entire
naming convention for module files. This uses the projections format

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -486,8 +487,6 @@ present. For instance with a configuration like:
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
.. _package-strong-preferences:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Conflicts and strong preferences
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -236,7 +237,8 @@ for details):
.. code-block:: python
:linenos:
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -1926,29 +1928,71 @@ to the empty list.
String. A URL pointing to license setup instructions for the software.
Defaults to the empty string.
For example, let's take a look at the Arm Forge package.
For example, let's take a look at the package for the PGI compilers.
.. code-block:: python
# Licensing
license_required = True
license_comment = "#"
license_files = ["licences/Licence"]
license_vars = [
"ALLINEA_LICENSE_DIR",
"ALLINEA_LICENCE_DIR",
"ALLINEA_LICENSE_FILE",
"ALLINEA_LICENCE_FILE",
]
license_url = "https://developer.arm.com/documentation/101169/latest/Use-Arm-Licence-Server"
license_comment = "#"
license_files = ["license.dat"]
license_vars = ["PGROUPD_LICENSE_FILE", "LM_LICENSE_FILE"]
license_url = "http://www.pgroup.com/doc/pgiinstall.pdf"
Arm Forge requires a license. Its license manager uses the ``#`` symbol to denote a comment.
It expects the license file to be named ``License`` and to be located in a ``licenses`` directory
in the installation prefix.
As you can see, PGI requires a license. Its license manager, FlexNet, uses
the ``#`` symbol to denote a comment. It expects the license file to be
named ``license.dat`` and to be located directly in the installation prefix.
If you would like the installation file to be located elsewhere, simply set
``PGROUPD_LICENSE_FILE`` or ``LM_LICENSE_FILE`` after installation. For
further instructions on installation and licensing, see the URL provided.
If you would like the installation file to be located elsewhere, simply set ``ALLINEA_LICENSE_DIR`` or
one of the other license variables after installation. For further instructions on installation and
licensing, see the URL provided.
Let's walk through a sample PGI installation to see exactly what Spack is
and isn't capable of. Since PGI does not provide a download URL, it must
be downloaded manually. It can either be added to a mirror or located in
the current directory when ``spack install pgi`` is run. See :ref:`mirrors`
for instructions on setting up a mirror.
After running ``spack install pgi``, the first thing that will happen is
Spack will create a global license file located at
``$SPACK_ROOT/etc/spack/licenses/pgi/license.dat``. It will then open up the
file using :ref:`your favorite editor <controlling-the-editor>`. It will look like
this:
.. code-block:: sh
# A license is required to use pgi.
#
# The recommended solution is to store your license key in this global
# license file. After installation, the following symlink(s) will be
# added to point to this file (relative to the installation prefix):
#
# license.dat
#
# Alternatively, use one of the following environment variable(s):
#
# PGROUPD_LICENSE_FILE
# LM_LICENSE_FILE
#
# If you choose to store your license in a non-standard location, you may
# set one of these variable(s) to the full pathname to the license file, or
# port@host if you store your license keys on a dedicated license server.
# You will likely want to set this variable in a module file so that it
# gets loaded every time someone tries to use pgi.
#
# For further information on how to acquire a license, please refer to:
#
# http://www.pgroup.com/doc/pgiinstall.pdf
#
# You may enter your license below.
You can add your license directly to this file, or tell FlexNet to use a
license stored on a separate license server. Here is an example that
points to a license server called licman1:
.. code-block:: none
SERVER licman1.mcs.anl.gov 00163eb7fba5 27200
USE_SERVER
If your package requires the license to install, you can reference the
location of this global license using ``self.global_license_file``.
@@ -2923,9 +2967,9 @@ make sense during the build phase may not be needed at runtime, and vice versa.
it makes sense to let a dependency set the environment variables for its dependents. To allow all
this, Spack provides four different methods that can be overridden in a package:
1. :meth:`setup_build_environment <spack.builder.BaseBuilder.setup_build_environment>`
1. :meth:`setup_build_environment <spack.builder.Builder.setup_build_environment>`
2. :meth:`setup_run_environment <spack.package_base.PackageBase.setup_run_environment>`
3. :meth:`setup_dependent_build_environment <spack.builder.BaseBuilder.setup_dependent_build_environment>`
3. :meth:`setup_dependent_build_environment <spack.builder.Builder.setup_dependent_build_environment>`
4. :meth:`setup_dependent_run_environment <spack.package_base.PackageBase.setup_dependent_run_environment>`
The Qt package, for instance, uses this call:
@@ -4898,15 +4942,15 @@ If your package has a virtual dependency like ``mpi``, then referring to
``spec["mpi"]`` within ``install()`` will get you the concrete ``mpi``
implementation in your dependency DAG. That is a spec object just like
the one passed to install, only the MPI implementations all set some
additional properties on it to help you out. E.g., in openmpi, you'll
additional properties on it to help you out. E.g., in mvapich2, you'll
find this:
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/openmpi/package.py
:pyobject: Openmpi.setup_dependent_package
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/mvapich2/package.py
:pyobject: Mvapich2.setup_dependent_package
That code allows the ``openmpi`` package to associate an ``mpicc`` property
with the ``openmpi`` node in the DAG, so that dependents can access it.
``mvapich2`` and ``mpich`` do similar things. So, no matter what MPI
That code allows the mvapich2 package to associate an ``mpicc`` property
with the ``mvapich2`` node in the DAG, so that dependents can access it.
``openmpi`` and ``mpich`` do similar things. So, no matter what MPI
you're using, spec["mpi"].mpicc gets you the location of the MPI
compilers. This allows us to have a fairly simple polymorphic interface
for information about virtual dependencies like MPI.
@@ -5135,7 +5179,7 @@ other checks.
- Not applicable
* - :ref:`PythonPackage <pythonpackage>`
- Not applicable
- ``test_imports`` (module imports)
- ``test`` (module imports)
* - :ref:`QMakePackage <qmakepackage>`
- ``check`` (``make check``)
- Not applicable
@@ -5144,7 +5188,7 @@ other checks.
- Not applicable
* - :ref:`SIPPackage <sippackage>`
- Not applicable
- ``test_imports`` (module imports)
- ``test`` (module imports)
* - :ref:`WafPackage <wafpackage>`
- ``build_test`` (must be overridden)
- ``install_test`` (must be overridden)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -330,7 +331,7 @@ that ``--tests`` is passed to ``spack ci rebuild`` as part of the
- spack --version
- cd ${SPACK_CONCRETE_ENV_DIR}
- spack env activate --without-view .
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture.platform}-{architecture.target}/{name}-{version}-{hash}'"
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
- if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
@@ -820,69 +821,6 @@ presence of a ``SPACK_CDASH_AUTH_TOKEN`` environment variable during the
build group on CDash called "Release Testing" (that group will be created if
it didn't already exist).
.. _ci_artifacts:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
CI Artifacts Directory Layout
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
When running the CI build using the command ``spack ci rebuild`` a number of directories are created for
storing data generated during the CI job. The default root directory for artifacts is ``job_scratch_root``.
This can be overridden by passing the argument ``--artifacts-root`` to the ``spack ci generate`` command
or by setting the ``SPACK_ARTIFACTS_ROOT`` environment variable in the build job scripts.
The top level directories under the artifact root are ``concrete_environment``, ``logs``, ``reproduction``,
``tests``, and ``user_data``. Spack does not restrict what is written to any of these directories nor does
it require user specified files be written to any specific directory.
------------------------
``concrete_environment``
------------------------
The directory ``concrete_environment`` is used to communicate the ci generate processed ``spack.yaml`` and
the concrete ``spack.lock`` for the CI environment.
--------
``logs``
--------
The directory ``logs`` contains the spack build log, ``spack-build-out.txt``, and the spack build environment
modification file, ``spack-build-mod-env.txt``. Additionally all files specified by the packages ``Builder``
property ``archive_files`` are also copied here (ie. ``CMakeCache.txt`` in ``CMakeBuilder``).
----------------
``reproduction``
----------------
The directory ``reproduction`` is used to store the files needed by the ``spack reproduce-build`` command.
This includes ``repro.json``, copies of all of the files in ``concrete_environment``, the concrete spec
JSON file for the current spec being built, and all of the files written in the artifacts root directory.
The ``repro.json`` file is not versioned and is only designed to work with the version of spack CI was run with.
An example of what a ``repro.json`` may look like is here.
.. code:: json
{
"job_name": "adios2@2.9.2 /feaevuj %gcc@11.4.0 arch=linux-ubuntu20.04-x86_64_v3 E4S ROCm External",
"job_spec_json": "adios2.json",
"ci_project_dir": "/builds/spack/spack"
}
---------
``tests``
---------
The directory ``tests`` is used to store output from running ``spack test <job spec>``. This may or may not have
data in it depending on the package that was built and the availability of tests.
-------------
``user_data``
-------------
The directory ``user_data`` is used to store everything else that shouldn't be copied to the ``reproduction`` direcotory.
Users may use this to store additional logs or metrics or other types of files generated by the build job.
-------------------------------------
Using a custom spack in your pipeline
-------------------------------------

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,13 +1,13 @@
sphinx==8.2.3
sphinxcontrib-programoutput==0.18
sphinx==8.1.3
sphinxcontrib-programoutput==0.17
sphinx_design==0.6.1
sphinx-rtd-theme==3.0.2
python-levenshtein==0.27.1
sphinx-rtd-theme==3.0.1
python-levenshtein==0.26.1
docutils==0.21.2
pygments==2.19.1
urllib3==2.3.0
pytest==8.3.5
isort==6.0.1
black==25.1.0
flake8==7.1.2
pygments==2.18.0
urllib3==2.2.3
pytest==8.3.3
isort==5.13.2
black==24.10.0
flake8==7.1.1
mypy==1.11.1

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -8,6 +8,7 @@ unzip, , , Compress/Decompress archives
bzip2, , , Compress/Decompress archives
xz, , , Compress/Decompress archives
zstd, , Optional, Compress/Decompress archives
file, , , Create/Use Buildcaches
lsb-release, , , Linux: identify operating system version
gnupg2, , , Sign/Verify Buildcaches
git, , , Manage Software Repositories
1 Name Supported Versions Notes Requirement Reason
8 bzip2 Compress/Decompress archives
9 xz Compress/Decompress archives
10 zstd Optional Compress/Decompress archives
11 file Create/Use Buildcaches
12 lsb-release Linux: identify operating system version
13 gnupg2 Sign/Verify Buildcaches
14 git Manage Software Repositories

1
lib/spack/env/aocc/clang vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/aocc/clang++ vendored Symbolic link
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@@ -0,0 +1 @@
../cpp

1
lib/spack/env/aocc/flang vendored Symbolic link
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@@ -0,0 +1 @@
../fc

1
lib/spack/env/arm/armclang vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/arm/armclang++ vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/arm/armflang vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/c++ vendored Symbolic link
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@@ -0,0 +1 @@
cc

1
lib/spack/env/c89 vendored Symbolic link
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@@ -0,0 +1 @@
cc

1
lib/spack/env/c99 vendored Symbolic link
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@@ -0,0 +1 @@
cc

1
lib/spack/env/case-insensitive/CC vendored Symbolic link
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@@ -0,0 +1 @@
../cc

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@@ -1,7 +1,8 @@
#!/bin/sh -f
# shellcheck disable=SC2034 # evals in this script fool shellcheck
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -36,9 +37,15 @@ readonly lsep=''
# the script runs. They are set by routines in spack.build_environment
# as part of the package installation process.
readonly params="\
SPACK_COMPILER_WRAPPER_PATH
SPACK_ENV_PATH
SPACK_DEBUG_LOG_DIR
SPACK_DEBUG_LOG_ID
SPACK_COMPILER_SPEC
SPACK_CC_RPATH_ARG
SPACK_CXX_RPATH_ARG
SPACK_F77_RPATH_ARG
SPACK_FC_RPATH_ARG
SPACK_LINKER_ARG
SPACK_SHORT_SPEC
SPACK_SYSTEM_DIRS
SPACK_MANAGED_DIRS"
@@ -339,9 +346,6 @@ case "$command" in
;;
ld|ld.gold|ld.lld)
mode=ld
if [ -z "$SPACK_CC_RPATH_ARG" ]; then
comp="CXX"
fi
;;
*)
die "Unknown compiler: $command"
@@ -396,12 +400,10 @@ fi
#
dtags_to_add="${SPACK_DTAGS_TO_ADD}"
dtags_to_strip="${SPACK_DTAGS_TO_STRIP}"
linker_arg="ERROR: LINKER ARG WAS NOT SET, MAYBE THE PACKAGE DOES NOT DEPEND ON ${comp}?"
eval "linker_arg=\${SPACK_${comp}_LINKER_ARG:?${linker_arg}}"
linker_arg="${SPACK_LINKER_ARG}"
# Set up rpath variable according to language.
rpath="ERROR: RPATH ARG WAS NOT SET, MAYBE THE PACKAGE DOES NOT DEPEND ON ${comp}?"
rpath="ERROR: RPATH ARG WAS NOT SET"
eval "rpath=\${SPACK_${comp}_RPATH_ARG:?${rpath}}"
# Dump the mode and exit if the command is dump-mode.
@@ -410,6 +412,13 @@ if [ "$SPACK_TEST_COMMAND" = "dump-mode" ]; then
exit
fi
# If, say, SPACK_CC is set but SPACK_FC is not, we want to know. Compilers do not
# *have* to set up Fortran executables, so we need to tell the user when a build is
# about to attempt to use them unsuccessfully.
if [ -z "$command" ]; then
die "Compiler '$SPACK_COMPILER_SPEC' does not have a $language compiler configured."
fi
#
# Filter '.' and Spack environment directories out of PATH so that
# this script doesn't just call itself
@@ -418,7 +427,7 @@ new_dirs=""
IFS=':'
for dir in $PATH; do
addpath=true
for spack_env_dir in $SPACK_COMPILER_WRAPPER_PATH; do
for spack_env_dir in $SPACK_ENV_PATH; do
case "${dir%%/}" in
"$spack_env_dir"|'.'|'')
addpath=false
@@ -779,17 +788,15 @@ case "$mode" in
C)
extend spack_flags_list SPACK_ALWAYS_CFLAGS
extend spack_flags_list SPACK_CFLAGS
preextend flags_list SPACK_TARGET_ARGS_CC
;;
CXX)
extend spack_flags_list SPACK_ALWAYS_CXXFLAGS
extend spack_flags_list SPACK_CXXFLAGS
preextend flags_list SPACK_TARGET_ARGS_CXX
;;
F)
preextend flags_list SPACK_TARGET_ARGS_FORTRAN
;;
esac
# prepend target args
preextend flags_list SPACK_TARGET_ARGS
;;
esac

1
lib/spack/env/cce/case-insensitive/CC vendored Symbolic link
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@@ -0,0 +1 @@
../../cc

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@@ -0,0 +1 @@
../../cc

1
lib/spack/env/cce/cc vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/cce/craycc vendored Symbolic link
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@@ -0,0 +1 @@
../cc

1
lib/spack/env/cce/crayftn vendored Symbolic link
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@@ -0,0 +1 @@
../cc

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