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...

158 Commits

Author SHA1 Message Date
Harmen Stoppels
522d9e260b mirrors: distinguish between source/binary mirror; simplify schema (#34523)
Allow the following formats:

```yaml
mirrors:
  name: <url>
```

```yaml
mirrors:
  name:
    url: s3://xyz
    access_pair: [x, y]
```

```yaml
mirrors:
  name:
    fetch: http://xyz
    push:
      url: s3://xyz
      access_pair: [x, y]
```

And reserve two new properties to indicate the mirror type (e.g.
mirror.spack.io is a source mirror, not a binary cache)

```yaml
mirrors:
  spack-public:
    source: true
    binary: false
    url: https://mirror.spack.io
```
2023-07-13 11:29:17 +00:00
Massimiliano Culpo
3261889e3a spack audit: allow skipping version checks from package.py (#28372)
A few packages have version directives evaluated
within if statements, conditional on the value of
`platform.platform()`.

Sometimes there are no cases for e.g. platform=darwin and that
causes a lot of spurious failures with version existence
audits.

This PR allows expressing conditions to skip version
existence checks in audits and avoid these spurious reports.
2023-07-13 06:47:47 -04:00
Harmen Stoppels
161b30a32f Add type hints to spack.installer (#38872) 2023-07-13 10:41:19 +00:00
Adam J. Stewart
b67f1f395b Add missing space in error msg (#38863) 2023-07-13 10:24:02 +02:00
dependabot[bot]
33c2fd7228 build(deps): bump docker/setup-buildx-action from 2.9.0 to 2.9.1 (#38868)
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.9.0 to 2.9.1.
- [Release notes](https://github.com/docker/setup-buildx-action/releases)
- [Commits](2a1a44ac4a...4c0219f9ac)

---
updated-dependencies:
- dependency-name: docker/setup-buildx-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-13 10:23:22 +02:00
Manuela Kuhn
7d5007b5e4 Restrict py-pip version for packages using --install-option (#38837) 2023-07-13 10:00:40 +02:00
Adam J. Stewart
bb7f437bf5 Standardize subcommand help strings (#38804)
### Rationale

While working on #29549, I noticed a lot of inconsistencies in our argparse help messages. This is important for fish where these help messages end up as descriptions in the tab completion menu. See https://github.com/spack/spack/pull/29549#issuecomment-1627596477 for some examples of longer or more stylized help messages.

### Implementation

This PR makes the following changes:

- [x] help messages start with a lowercase letter.
- [x] Help messages do not end with a period
- [x] the first line of a help message is short and simple

    longer text is separated by an empty line
- [x] "help messages do not use triple quotes" 

    """(except docstrings)"""
- [x] Parentheses not needed for string concatenation inside function call
- [x] Remove "..." "..." string concatenation leftover from black reformatting
- [x] Remove Sphinx argument docs from help messages

The first 2 choices aren't very controversial, and are designed to match the syntax of the `--help` flag automatically added by argparse. The 3rd choice is more up for debate, and is designed to match our package/module docstrings. The 4th choice is designed to avoid excessive newline characters and indentation. We may actually want to go even further and disallow docstrings altogether.

### Alternatives

Choice 3 in particular has a lot of alternatives. My goal is solely to ensure that fish tab completion looks reasonable. Alternatives include:

1. Get rid of long help messages, only allow short simple messages
2. Move longer help messages to epilog
3. Separate by 2 newline characters instead of 1
4. Separate by period instead of newline. First sentence goes into tab completion description

The number of commands with long help text is actually rather small, and is mostly relegated to `spack ci` and `spack buildcache`. So 1 isn't actually as ridiculous as it sounds.

Let me know if there are any other standardizations or alternatives you would like to suggest.
2023-07-13 00:18:23 -07:00
Vicente Bolea
6312ae8464 vtk-m: modernize vtk-m recipe (#38726) 2023-07-13 08:21:38 +02:00
Harmen Stoppels
3828ae2a52 ci: populate caches in before script (#38762)
* ci: run spack list in power ci

Let's see if Spack itself is the bottleneck in CI...

* rebuild curl in CI

* more of the same please!

* drop the profiler

* undo rebuildme test in ci variant

* add comment for posterity

* enable profiling

* trigger CI

* See how it goes now that perf regressions are fixed on develop

* try shorter poll intervals

* Revert "try shorter poll intervals"

This reverts commit d60c34ad3eceead0c13a5277cf8e783fd42b7458.

* Remove spec.format call in Database._get_matching_spec_key

* once more in ci please

* undo irrelevant changes

* run spack list in before script

* test in ci

* -:

* Undo CI testing
2023-07-12 18:12:22 -05:00
dependabot[bot]
c2bdb4600a build(deps): bump docker/setup-buildx-action from 2.8.0 to 2.9.0 (#38783)
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.8.0 to 2.9.0.
- [Release notes](https://github.com/docker/setup-buildx-action/releases)
- [Commits](16c0bc4a6e...2a1a44ac4a)

---
updated-dependencies:
- dependency-name: docker/setup-buildx-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-12 17:18:05 -04:00
Jonathon Anderson
90208da8a5 containers: retain shallow git data (#37734) 2023-07-12 21:03:10 +00:00
Michael Fink
c8026c3c87 Add path to MPI executables to ^mpi dependents (#35758) 2023-07-12 13:58:43 -05:00
G-Ragghianti
f895f80bc2 Package papi: update for smoke tests (#38711)
* Adding papi smoke tests
* smoke tests
* update to new test framework
2023-07-12 11:38:57 -07:00
Stephan Grein
0ca11d7033 Fix fmt and spdlog versions for micromamba. (#38739)
The spdlog project precisely states/depends which fmt version should
be used for compatibility. Latest version 1.11.0 depends explictly on
fmt 9.1.0. Without fixed version micromamba build fails when using spack
install micromamba on e.g. Rockylinux 8.5.
2023-07-12 11:24:26 -07:00
Dax Lynch
4fa7dc03ae py-callmonitor: added new package (#38764)
* py-callmonitor: added new package

* depends_on numpy

* Update var/spack/repos/builtin/packages/py-callmonitor/package.py

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

---------

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com>
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-07-12 11:19:57 -07:00
Vicente Bolea
5ba99b8eb2 adios2: add aws variant (#38857) 2023-07-12 11:14:47 -07:00
Samuel Browne
78b24b45f6 Add gettext as a dependency of bison (#35979)
The 'bison' executable requires libtextstyle to run.  I think this was
usually satisfied because gettext is often installed with the OS, or
brought in accidentally via perl/m4.

Looks like the libtextstyle library dependency started in Bison 3.4
2023-07-12 14:01:12 -04:00
kjrstory
c2bafd7b7f openfoam-org: add precision option (#38746) 2023-07-12 14:49:45 +02:00
Andre Sailer
778cbb225c Static-analysis-suite: mark versions deprecate for this obsolete package (#38754) 2023-07-12 14:47:03 +02:00
Mikael Simberg
62f24f1b2a Patch broken CMake handling when no architectures are found in HIP package (#37022) 2023-07-12 14:39:41 +02:00
Vicente Bolea
37ef31dc22 vtk-m: correct cuda_arch variant behavior (#38697)
Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-07-12 14:34:50 +02:00
Mikael Simberg
7f2be62ff2 Add conflict for hpx on ARM (#38812)
HPX requires use of Boost.Context on ARM.
2023-07-12 13:38:57 +02:00
snehring
ca16066eef apptainer: add flag_handler to discard spack flags (#38843) 2023-07-12 13:31:47 +02:00
Vanessasaurus
6a762501f8 flux-sched: add v0.28.0 (#38860)
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-07-12 05:33:48 -04:00
Seth R. Johnson
29fa4bf64c hepmc3: add protobuf variant and update flags (#38841) 2023-07-12 11:21:49 +02:00
Adam J. Stewart
d2ed8c5226 py-torch: rename master to main (#38858) 2023-07-12 11:20:47 +02:00
Massimiliano Culpo
fb223f034b Fix build of CentOS stream docker image (#38824) 2023-07-12 10:55:43 +02:00
Daniele Cesarini
ca4c59cd77 REGALE: add new package (#38444)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-12 10:21:36 +02:00
Richard Berger
dfcb3bca65 legion: add ofi-slingshot11 conduit (#38859) 2023-07-12 03:53:26 -04:00
Tamara Dahlgren
ce6b79cd96 cbflib: fix build with newer gfortran (#38632) 2023-07-12 09:15:26 +02:00
Rocco Meli
831bfb43f5 DLA-Future: ensure umpire~cuda~rocm when ~cuda~rocm (#38835)
Co-authored-by: Raffaele Solcà <rasolca@cscs.ch>
2023-07-12 09:11:07 +02:00
Wileam Y. Phan
60697b421e fpm: add versions up to 0.9.0 (#38856) 2023-07-12 09:09:36 +02:00
Michael Kuhn
d5d0b8821c installer: Improve status reporting (#37903)
Refactor `TermTitle` into `InstallStatus` and use it to show progress
information both in the terminal title as well as inline. This also
turns on the terminal title status by default.

The inline output will look like the following after this change:
```
==> Installing m4-1.4.19-w2fxrpuz64zdq63woprqfxxzc3tzu7p3 [4/4]
```
2023-07-12 08:54:45 +02:00
Samuel Browne
d3704130b6 trilinos: Add CMake minimum and 14.2.0 version (#38853)
* Update minimum CMake version for Trilinos
  Changed to 3.23 as of release 14.0.0.
* Add Trilinos 14.2.0
2023-07-12 01:04:07 -04:00
Seth R. Johnson
9ef138dad5 protobuf: use cxxstd from abseil-cpp to fix C++17 build (#38840) 2023-07-11 20:03:51 -04:00
Thomas Madlener
6b51bfb713 edm4hep: Add tag for version 0.10 and deprecate older versions (#38817)
* edm4hep: add latest tag
* edm4hep: Mark all older versions as deprecated
2023-07-11 16:00:06 -07:00
MatthewLieber
fb7cdb0408 Adding sha for the 7.2 release of OMB (#38842)
Co-authored-by: Matt Lieber <lieber.31@osu.edu>
2023-07-11 15:56:25 -07:00
Chris Green
1e1b086484 [procps] Improve gettext/libintl handling (#38646)
Fixes #38639.
2023-07-11 15:35:55 -07:00
Stephen Hudson
0d51faf6cb libEnsemble: add v0.10.1 (#38845) 2023-07-11 18:18:16 -04:00
Manuela Kuhn
ed247744e7 py-charm4py: add missing dependencies (#38830) 2023-07-11 14:49:49 -04:00
Christian Glusa
299066feb5 Py-PyNucleus: Update dependencies, enable parallel build (#38779) 2023-07-11 12:50:41 -04:00
Martin Aumüller
2e695fa03f ispc: on ARM, build with ARM targets enabled, and updates (#38080)
* llvm: fix build with libcxx=none

* ispc: checksum 1.20.0

* ispc: ensure that it does not crash immediately

this would happen if linked to the wrong libc++

* ispc: fix build on macos

find ncurses instead of curses and link against tinfo in order to avoid
unresolved references to _del_curterm, _set_curterm, _setupterm, and
_tigetnum

* ispc: enable arm targets, if building on arm

* ispc: remove double cmake argument

I forgot to remove the constant -DARM_ENABLED=FALSE when adding
-DARM_ENABLED with a value depending on target architecture

* ispc: fix linux build

since 1.20, linux build uses TBB as default tasking system and thus
needs to depend on it

* ispc: try to fix link error on linux

link against both curses (as before) and tinfo (added because of macos)

* ispc: update for recent llvm changes

libcxx=none instead of ~libcxx
2023-07-11 09:44:18 -07:00
Adam J. Stewart
5fc949f252 py-black: add v23.7.0 (#38834) 2023-07-11 09:50:19 -05:00
Adam J. Stewart
e6876f47e6 py-lightning: add v2.0.5 (#38828) 2023-07-11 09:49:50 -05:00
Rocco Meli
364884df97 fix tiled-mm (#38774) 2023-07-11 14:28:37 +02:00
Massimiliano Culpo
d0e39a9870 Add CHANGELOG entry for v0.20.1 (#38836) 2023-07-11 13:35:04 +02:00
Todd Gamblin
162d0926f9 mypy: add more ignored modules to pyproject.toml (#38769)
`mypy` will check *all* imported packages, even optional dependencies outside your
project, and this can cause issues if you are targeting python versions *older* than the
one you're running in. `mypy` will report issues in the latest versions of dependencies
as errors even if installing on some older python would have installed an older version
of the dependency.

We saw this problem before with `numpy` in #34732. We've started seeing it with IPython
in #38704. This fixes the issue by exempting `IPython` and a number of other imports of
Spack's from `mypy` checking.
2023-07-11 13:30:07 +02:00
Manuela Kuhn
f0ef0ceb34 py-gluoncv: switch to PyPI and add 0.10.5.post0 (#38814)
* py-gluoncv: switch to PyPI and add 0.10.5.post0

* Fix style

* Remove no-unicode-readme.patch
2023-07-10 21:19:15 -05:00
Adam J. Stewart
5ba40913af py-numpy: add v1.25.1 (#38799) 2023-07-10 21:18:39 -05:00
Jen Herting
7288f11cf9 [arrow] tuple has no method append (#38820) 2023-07-10 18:12:08 -07:00
Wouter Deconinck
d5b01e45ce mlpack: remove go variant from cmake_args (#38821) 2023-07-10 18:10:02 -07:00
Manuela Kuhn
8827f01865 py-minkowskiengine: add missing openblas dependency (#38742)
* py-minkowskiengine: add missing openblas dependency

* Add comment about blas
2023-07-10 17:21:16 -05:00
renjithravindrankannath
2163c3701c Setting library path as lib similar to other rocm packages. (#37568)
* Setting library path as lib similar to other rocm packages.
* Fix style check failure
* Restricting changes to 5.4.3 and above
* Including comgr change
2023-07-10 14:55:39 -07:00
afzpatel
db23fd055c new hip-examples package (#35891)
* initial commit for adding hip-examples package
* adding test to hip-examples
* fixed compile error on add4
* change standalone test to use new syntax
2023-07-10 13:05:46 -07:00
Sangu Mbekelu
73acf110ff py-sacrebleu (#37159)
* new mosesdecoder package

* "new py-sacrebleu package"

* Delete package.py

* [@spackbot] updating style on behalf of Sangu-Mbekelu

* Update package.py

updating package based on review

---------

Co-authored-by: Sangu Mbekelu <s.mbekelu9@gmail.com>
2023-07-10 12:16:42 -07:00
kjrstory
ff49969264 Package:Openfoam-org version url using function (#37587)
* Package:Openfoam-org version url using function
* Package:Openfoam-org small style fix
* openfoam-org: url_for_function
2023-07-10 11:19:29 -07:00
eugeneswalker
eb94d830e1 legion +rocm: set HIP_PATH to {hip.prefix}/hip (#38819) 2023-07-10 10:35:12 -07:00
Chris Green
8fdd8fcf63 Perl package: detect opcode support in externals (#38618)
Spack-installed Perl always has opcode support, but external Perl
installations might not. This commit adds a +opcode variant and
updates the external detection logic to check for opcode support.

The postgresql package is updated to require perl+opcode (in
combination with the above, this helps detect when an external
Perl instance is sufficient for a Spack build of postgreqsql, or
if Spack needs to build its own Perl).
2023-07-10 10:01:20 -07:00
Michael Kuhn
30b077e63c glib: add 2.76.4 (#38813) 2023-07-10 09:06:05 -07:00
Taillefumier Mathieu
64c6d63675 Update cp2k recipe to use cmake or the current build system (#35718)
* Update cp2k recipe to use cmake or the current build system

Offers the possibility to build cp2k with the new cmake build system. commands like this are now supported

spack install cp2k@master build_system=cmake +.....

the recipe supports the following optional functionalities

- superlu, cosma, sirius, spglib, metis, spglib, libxc, libint, cuda/rocm, mkl/openblas/sci (and others), mpi, openmp, dbcsr
- dbcsr is built separately using the currently available recipe.

Two PRs need to be merged to be fully functional (cosma update in spack + one PR in cp2k github).

* Fix indentation

* Fix indentation

* Update libvori

* More typos

* Simplify BLAS/LAPACK

* Simplify BLAS/LAPACK

* Add A100 gpu value

* Fix typo

* Add the enable_regtests option

if -DCP2K_ENABLE_REGTESTS=ON (+enable_regtests with spack) then the location of the binary executables will be in the cp2k root directory under exe/build-cmake-*. This option is needed to run the regtests afterwards.

* Minor update

* more fixes

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>

* small changes

* Remove any reference to nvidia architecture in the rocm list

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Update var/spack/repos/builtin/packages/cp2k/package.py

Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>

* Final reformating

* Update py-fypp

---------

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>
Co-authored-by: Alberto Invernizzi <9337627+albestro@users.noreply.github.com>
2023-07-10 14:02:52 +02:00
Massimiliano Culpo
0ed6ff3823 Removing inactive maintainer (#38773) 2023-07-10 11:31:09 +02:00
Todd Gamblin
757f8ae59c find: add --hashes shortcut for piping to other commands (#38663)
People frequently ask us how to pipe `spack find` output to other commands, and we tell
them to do things like this:

```console
$ spack find --format "/{hash}" | spack uninstall -ay
```

Sometimes users don't know about hash references and come up with potentially ambiguous
formulations like this:

```console
spack find --format {name}@{version}%{compiler} | spack uninstall -ay
```

Since this is a common enough thing to want to do, and to make it more obvious how, this
PR adds a `-H` / `--hashes` as a shortcut, so you can now just do:

```console
spack find -H | spack uninstall -ay
```
2023-07-10 09:43:37 +02:00
Dax Lynch
27c62b981a Added package py-bitstruct (#38761)
* Added packages bitstruct, callmonitor, and PYnvtx

* Revert "Added packages bitstruct, callmonitor, and PYnvtx"

This reverts commit 76d25aa76b.

* py-bitstruct: This module is intended to have a similar interface as the python struct module, but working on bits instead of primitive data types (char, int, …)

* Update package.py

To pass the style prechecks

* PyNVTX: new package

* Delete package.py

Accidentally added this package.

* Update var/spack/repos/builtin/packages/py-bitstruct/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-09 20:19:07 -05:00
Manuela Kuhn
1ed934c710 py-triangle: restrict Python version (#38808) 2023-07-09 20:12:42 -04:00
Harmen Stoppels
eef14ddcad openssl: prefer 3.x (#36729)
* openssl: prefer 3.x

This PR is not intended to be merged immediately, but it would be good
to see what packages fail to build in CI so that we can get proper
version constraints on openssl (before all packages update and support
both openssl 1 and 3)

* Disable assembly for 3.x %oneapi

* cmake: depend on spack curl, to deal with curl - openssl compat

* also make zlib external

* remove overly strict & unsafe requirement on py-cryptographty patch version number

* update openssl compat bounds in py-cryptography

* smaller diff

* Make libssh2 an autotools/cmake package

* fix weird upperbound in libssh2 as there is not openssl v2

* libssh2: pc file lists plain -lssl -lcrypto w/o leading -L flag, confusing libgit2 parsing of pkg-config output

* Actually fix the issue in libssh2: its pc file looks broken
2023-07-09 17:48:00 -04:00
Jonathon Anderson
db879a5679 ci: Fix broken SPACK_CHECKOUT_VERSION (#38778) 2023-07-09 12:37:36 -07:00
Vanessasaurus
d0804c44f1 Automated deployment to update package flux-core 2023-07-08 (#38790)
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-07-09 12:12:55 -07:00
Harmen Stoppels
374fda1063 Don’t call spec.format in Database._get_matching_spec_key (#38792)
`"%s" % spec` formats the spec with deps included, which produces sometimes KBs
of data and is slow to run in pure Python. It can delay otherwise very short-lived
read/write locks on the database.

Discovered in #38762 where profile output showed about 2 seconds is spent in
`spec.format`, which is significant overhead when using multiprocessing to install
from binary cache in parallel (installation often takes <5s for small packages). With
this change, `spec.format` no longer shows up in profile output.

(This line hasn't changed since Spack v0.9 ;p)

* move format() call to custom NoSuchSpecError exception
* add a comment saying why, so we can eventually change `Spec.__str__`
2023-07-09 11:27:38 -04:00
Jonathon Anderson
3c14569b8e pkgconf: Update to new upstream URL (#38800)
See 437c2a3218
2023-07-09 16:12:47 +02:00
Michael Kuhn
841402c57a gcc: add 10.5.0 (#38784) 2023-07-09 12:13:04 +02:00
Wouter Deconinck
09e1258ed4 qt-* (Qt6 pkgs): new versions 6.5.0, 6.5.1 (#36705)
* qt-base: new version 6.5.0

* qt-declarative: new version 6.5.0

* qt-quick3d: new version 6.5.0

* qt-quicktimeline: new version 6.5.0

* qt-shadertools: new version 6.5.0

* qt-*: new version 6.5.1

* qt-base: new version 6.5.1
2023-07-08 15:36:27 -05:00
Dax Lynch
b2dcd9bd42 PyNVTX: added new package (#38763) 2023-07-07 20:02:21 -05:00
Manuela Kuhn
2dc76248d3 py-pyarrow: disable dataset variant by default (#38775)
* py-pyarrow: enable parquet variant by default

* Disable parquet variant by default

* Add conflict to enable parquet when dataset is active

* Disable dataset variant by default
2023-07-07 16:27:32 -05:00
Adam J. Stewart
bf6eb832ae py-matplotlib: add v3.7.2 (#38745)
* py-matplotlib: add v3.7.2

* Update dep versions
2023-07-07 14:43:41 -05:00
Chris Richardson
e8e6d69af5 New package: py-nanobind (#38327)
* initial commit of nanobind package

* style fixes

* Update package.py

Typo

* addressed PR comments

* add v1.4.0

* Update var/spack/repos/builtin/packages/py-nanobind/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Matthew Archer <ma595@cam.ac.uk>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-07 12:02:45 -04:00
Manuela Kuhn
050d8df5a5 py-astropy: fix import tests and restrict py-pip version (#38731)
* py-astropy: fix import tests and restrict py-pip version

* Fix --install-option name in comments

* Rename variant and fix variant dependencies

* Remove parquet variant from py-pyarrow
2023-07-07 10:19:02 -05:00
Massimiliano Culpo
6958b49c2f Remove "node_compiler" from the list of unknown atoms (#38753) 2023-07-07 13:19:53 +02:00
Harmen Stoppels
a1d33e97ec Fix multiple quadratic complexity issues in environments (#38771)
1. Fix O(n^2) iteration in `_get_overwrite_specs`
2. Early exit `get_by_hash` on full hash
3. Fix O(n^2) double lookup in `all_matching_specs` with hashes
4. Fix some legibility issues
2023-07-07 10:51:58 +00:00
Massimiliano Culpo
ca9b52bbc5 Prevent "spack external find" to error out on wrong permissions (#38755)
fixes #38733
2023-07-07 12:05:32 +02:00
Andrey Parfenov
ae00d7c358 add info about spack env from spack-configs for oneAPI build tools (#38751)
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
2023-07-07 03:47:54 +00:00
Mickael PHILIT
1071c1d8e0 add cgns 4.4.0 (#38530) 2023-07-06 17:52:03 -07:00
Carlos Bederián
5f6c832020 freesurfer: add 7.4.1, 7.4.0, 7.3.2 (#38544) 2023-07-06 17:51:01 -07:00
Wouter Deconinck
9e4c4be3f5 mlpack: new package (#38277)
* mlpack: new package

mlpack is an intuitive, fast, and flexible header-only C++ machine learning library with bindings to other languages. It is meant to be a machine learning analog to LAPACK, and aims to implement a wide array of machine learning methods and functions as a "swiss army knife" for machine learning researchers.

* mlpack: upstream merged patch to allow python installation in spack
2023-07-06 13:42:56 -07:00
John W. Parent
6c325a2246 Curl Package: Fixup bugs preventing build on Win (#38757) 2023-07-06 14:59:42 -04:00
Ben Cowan
28b884ace5 Add new version 5.0.0 of PyAMG (#38674)
* Added v5.0.0 of PyAMG.  This required v7.1.0 of setuptools_scm due to a bug in 7.0.5.

* Added comment about version requirement.

* Loosened dependency based on build experiments.

* Updated tomli deps.

* Update var/spack/repos/builtin/packages/py-setuptools-scm/package.py

Dependence for 7.0 only.

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-pyamg/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Swapped lines.

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-06 13:54:29 -04:00
Harmen Stoppels
a13687f022 Disable fortran in openblas for darwin ci, fix variant default value (#38752) 2023-07-06 17:47:20 +02:00
Thomas Bouvier
bd81676e3c py-torch: fix build (#38730) 2023-07-06 09:35:11 -05:00
Adam J. Stewart
7eaa99eabc py-scikit-learn: add v1.3.0 (#38660) 2023-07-06 08:55:00 -05:00
kjrstory
5cb0b57b30 openfoam.org: add a maintainer(#37280) (#37697)
Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
2023-07-06 13:44:24 +02:00
Jen Herting
c6867649b9 [py-blis] added versions 0.7.9 and 0.9.1 (#38269)
* [py-blis] added version 0.7.9

* [py-blis] added version 0.9.1

* [py-blis]

- removed type run for dependency py-cython
2023-07-06 05:09:11 -04:00
Jim Phillips
c129603192 namd: add maintainer (#38740) 2023-07-06 04:28:54 -04:00
Manuela Kuhn
4e456992e4 py-abipy: add 0.9.3 (#38716)
* py-abipy: add 0.9.3

* Remove py-cython dependency

* Remove dep version restrictions for new release
2023-07-06 04:23:55 -04:00
Jen Herting
10876736e0 [py-cymem] added version 2.0.7 (#38267)
* [py-cymem] added version 2.0.3

* [py-cymem] added restriction to py-wheel limitation
2023-07-06 04:13:44 -04:00
Thomas Bouvier
982cdd7988 py-dm-tree: add v0.1.8 (#38606)
* `py-dm-tree`: add v0.1.8

* Update dependencies

* Fix hash
2023-07-06 00:12:04 -05:00
Thomas Bouvier
095e48f399 py-horovod: update to v0.28.1 (#38732) 2023-07-05 23:56:47 -05:00
Manuela Kuhn
833db65fa3 py-pip: add 23.1.2 (#38608)
* py-pip: add 23.1.2

* Restrict py-pip version for py-protobuf

* Restrict py-pip version for straightforward packages

* Restrict py-pip version for nrm

* Fix --install-option name in comments

* Simplify py-pip restriction for py-scs

* nrm: fix wrong comment
2023-07-05 23:37:16 -04:00
Harmen Stoppels
06268f7b72 perl: add 5.38.0, 5.36.1; prefer all even minor versions over development versions (#38690)
* perl: add 5.38.0, 5.36.1; prefer all even minor versions over development versions

* fix libxcrypt build with new perl

* fix libxcrypt with a patch
2023-07-05 18:08:54 -04:00
Manuela Kuhn
f884e71a03 py-spglib: add 2.0.2 (#38715)
* py-spglib: add 2.0.2

* Update var/spack/repos/builtin/packages/py-spglib/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Remove py-setuptools as run dependency

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-05 15:24:31 -05:00
Wouter Deconinck
ea1439dfa1 acts: new variant cxxstd (#38682)
* acts: allow ^root cxxstd=20

* acts: new variant cxxstd, pass through to root

* acts: always args.append CMAKE_CXX_STANDARD from variant

* acts: remove unused import

* acts: fix self.define_from_variant
2023-07-05 12:56:06 -07:00
Adam J. Stewart
45838cee0b Drop Python 2 super syntax (#38718) 2023-07-05 09:04:29 -05:00
Adam J. Stewart
95847a0b37 Drop Python 2 object subclassing (#38720) 2023-07-05 14:37:44 +02:00
George Young
8861fe0294 salmon: patching to build with %gcc@13: (#38553)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-07-05 14:36:55 +02:00
Harmen Stoppels
12427c6974 plumed: deprecate non-buildable versions, patch Python makefile only when supported (#38713) 2023-07-05 05:48:13 -04:00
Taillefumier Mathieu
a412403d7b Update cosma and a few related recipes (#35615)
* Add maintainers 

* Updated cosma archive checksum and costa version

- updated cosma version (in the cosma build system)
- updated costa version
- use the default generic url for downloading packages
- do not build tiled-mm when the cpu only version is needed


Signed-off-by: Dr. Mathieu Taillefumier <mathieu.taillefumier@free.fr>
Co-authored-by: Rocco Meli <r.meli@bluemail.ch>
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-07-05 11:02:50 +02:00
Martin Diehl
6a258c148f damask: fix build of alpha release (#38457) 2023-07-05 10:59:05 +02:00
Tom Epperly
8b13440038 Add version 1.8.23 that fixes a compilation bug on clang-15. (#38541) 2023-07-05 10:56:18 +02:00
Tamara Dahlgren
632f840d8a tk: convert to new stand-alone test process (#38575) 2023-07-05 10:55:07 +02:00
Alex Richert
8372726a88 ip: add v4.1.0, and additional variants (#38526) 2023-07-05 10:45:38 +02:00
Tamara Dahlgren
5dc84b64e9 tests/qthreads: convert to new stand-alone test process (#38600) 2023-07-05 10:41:25 +02:00
Tamara Dahlgren
8d72b8dd63 tests/papyrus: convert to new stand-alone test process (#38627) 2023-07-05 10:34:15 +02:00
Jim Phillips
adde84e663 Build NAMD with Tcl by default (#38645)
NAMD users expect the Tcl scripting interface to be enabled as it is used in many examples and tutorials in addition to being required for features such as multi-copy algorithms.
2023-07-05 10:29:11 +02:00
Rémi Lacroix
f863066b7e git-annex: add latest version 10.20230408 (#38728) 2023-07-05 04:27:46 -04:00
Juan Miguel Carceller
082afe04b8 xrootd: add _STAT_VER patch (#38547)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-07-05 10:14:18 +02:00
Peter Scheibel
f365386447 Installations: don't set group permissions when they match what is desired (#38036)
* When installing a package Spack will attempt to set group permissions on
the install prefix even when the configuration does not specify a group.

Co-authored-by: David Gomez <dvdgomez@users.noreply.github.com>
2023-07-05 09:54:04 +02:00
Carlos Bederián
a90200528f hcoll: ucx version requirements (#38665) 2023-07-05 09:48:58 +02:00
Adam J. Stewart
1ce6feef94 py-pyqt4: stricter dependency versions (#38673) 2023-07-05 09:45:24 +02:00
Weiqun Zhang
84010108b1 amrex: add v23.07 (#38676) 2023-07-05 09:43:37 +02:00
Adam J. Stewart
24d2005920 py-lightly: add v1.4.11 (#38717) 2023-07-05 09:41:08 +02:00
Robert Cohn
fa73b14247 intel-oneapi-mkl: support for cray mpich (#38725) 2023-07-05 09:20:19 +02:00
Manuela Kuhn
a99b7886e9 py-pymatgen: add 2022.9.8 (#38714) 2023-07-05 00:12:18 -05:00
Adam J. Stewart
2978911520 spack commands: add type hints and docstrings (#38705) 2023-07-04 16:43:02 -04:00
Harmen Stoppels
d35149d174 remove another Python 3.7 requirement & preference, since it was deprecated (#38710) 2023-07-04 20:33:47 +02:00
Manuela Kuhn
a3d11a7973 py-requests: add 2.31.0 (#38563) 2023-07-04 10:33:06 -04:00
Max Zeyen
cb69dbd804 gpi-space: add new versions (#38709)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-04 15:01:39 +02:00
Laura Bellentani
e6f50c5341 quantum-espresso: change in maintainers (#38688) 2023-07-04 14:06:21 +02:00
Chris White
32d0b5ca97 conduit: remove no longer needed blueos logic (#38698) 2023-07-04 07:52:59 -04:00
valmar
b537fad37a Added Python Prometheus client as dependency (#38700) 2023-07-04 07:12:47 -04:00
Thomas Bouvier
78e78eb1da nvtx: add new package (#38430)
Co-authored-by: thomas-bouvier <thomas-bouvier@users.noreply.github.com>
2023-07-04 07:07:41 -04:00
Stephen Sachs
8aeecafd1a wrf: add ARM compiler support (#38695) 2023-07-04 12:33:58 +02:00
Stephen Sachs
a0b2ca2dde Temporarily disable aws-pcluster pipelines (#38708) 2023-07-04 11:27:01 +02:00
Harmen Stoppels
08f23f4802 macos sip: apply on macos only, dont store LD_LIBRARY_PATH (#38687) 2023-07-04 10:54:13 +02:00
Adam J. Stewart
e9dc6dc96c Fix DYLD_* propagation to Python process from fish shell (#38615) 2023-07-04 10:48:56 +02:00
Adam J. Stewart
5588b93683 util-linux: add v2.39.1, fix macOS build (#38677) 2023-07-04 10:47:26 +02:00
George Young
70a38ea1c5 plink2: add new package @2.00a4.3 (#38469)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-07-04 04:09:45 -04:00
Adam J. Stewart
5bd7a0c563 spack make-installer: deterministic choice order (#38706) 2023-07-04 09:39:38 +02:00
Adam J. Stewart
33c5959e23 Remove from __future__ imports (#38703) 2023-07-04 08:30:29 +02:00
Manuela Kuhn
65288566e5 py-numpydoc: add 1.5.0 (#38701) 2023-07-03 22:13:54 -04:00
Manuela Kuhn
5e1c4693fd py-ruff: add 0.0.276 (#38702) 2023-07-03 21:59:14 -04:00
Aditya Bhamidipati
feb4681878 Add NCCL v2.18.3-1 release to recipe (#38647) 2023-07-03 16:26:07 -05:00
Thomas Bouvier
994b5ad49e ffmpeg: patch build failure (#38656)
* `ffmpeg`: patch build failure

* [@spackbot] updating style on behalf of thomas-bouvier

---------

Co-authored-by: thomas-bouvier <thomas-bouvier@users.noreply.github.com>
2023-07-03 11:12:26 -07:00
Harmen Stoppels
4654db54c7 hdf5-vol-log: depends on mpi (#38693)
From the configure.ac file:

> H5VL_log is built on top of MPI. Configure option --without-mpi or
> --with-mpi=no should not be used. Abort.

This currently fails to build in the oneAPI pipeline on `develop`
2023-07-03 20:08:40 +02:00
Adam J. Stewart
a6ebff3a2e py-pillow: add v10.0.0 (#38670) 2023-07-03 11:02:24 -07:00
Ashwin Kumar Karnad
6e8fb30b83 Add hash for octopusV13 (#38655) 2023-07-03 10:24:52 -07:00
Cyrus Harrison
465f83b484 add ascent 0.9.2 release (#38661) 2023-07-03 10:14:01 -07:00
Harmen Stoppels
ba7ae2c153 Drop requirement of python@3.7 since it's deprecated (#38692) 2023-07-03 16:15:32 +02:00
Jonathon Anderson
54adab7eac python: require xz libs=shared when +lzma (#38593) 2023-07-03 07:11:30 -05:00
Andrey Parfenov
30cb55e97c add support for oneapi compiler to wrf 4.4 (#38607)
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
2023-07-03 07:34:06 -04:00
Harmen Stoppels
3594203f64 guile: fix %oneapi fast math madness (#38691) 2023-07-03 13:25:55 +02:00
Adam J. Stewart
f0add2428c dbus: AutotoolsPackage, optional documentation build (#38679)
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-07-03 04:18:00 -04:00
Adam J. Stewart
af449b7943 qt-base: disable accessibility by default (#38680) 2023-07-03 09:45:22 +02:00
Adam J. Stewart
b6d591e39b bash: adam now uses fish (#38684) 2023-07-03 02:44:44 -05:00
Adam J. Stewart
3811dec18d Deprecate conda for Python 2 (#38681) 2023-07-03 09:44:20 +02:00
Adam J. Stewart
ae2efa1c27 xmlto: fix missing dependency on util-linux (#38678) 2023-07-03 09:43:18 +02:00
John Biddiscombe
acdcc8ed71 Add support to Paraview for TBB (#38582)
Co-authored-by: Jean Favre <jfavre@cscs.ch>
2023-07-03 09:33:56 +02:00
Jack Morrison
11bc27d984 Add libfabric 1.18.1 release (#38669) 2023-07-02 13:39:20 -07:00
Adam J. Stewart
4d5ff045e3 Deprecate Python 3.7 (#38619)
* Deprecated Python 3.7

* Add Python 3.7.17 because why not
2023-07-02 11:29:35 -05:00
Adam J. Stewart
63576275be SIPPackage: documentation fix (#38672) 2023-07-02 11:30:08 +02:00
Harmen Stoppels
cc74729115 Revert "openblas: do not build tests when installing (#38591)" (#38662)
This reverts commit 51c75c6da3.
2023-07-01 22:02:39 -04:00
471 changed files with 6344 additions and 4066 deletions

View File

@@ -17,7 +17,10 @@ concurrency:
jobs:
# Run audits on all the packages in the built-in repository
package-audits:
runs-on: ubuntu-latest
runs-on: ${{ matrix.operating_system }}
strategy:
matrix:
operating_system: ["ubuntu-latest", "macos-latest"]
steps:
- uses: actions/checkout@c85c95e3d7251135ab7dc9ce3241c5835cc595a9 # @v2
- uses: actions/setup-python@bd6b4b6205c4dbad673328db7b31b7fab9e241c0 # @v2
@@ -41,4 +44,4 @@ jobs:
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # @v2.1.0
if: ${{ inputs.with_coverage == 'true' }}
with:
flags: unittests,linux,audits
flags: unittests,audits

View File

@@ -95,7 +95,7 @@ jobs:
uses: docker/setup-qemu-action@2b82ce82d56a2a04d2637cd93a637ae1b359c0a7 # @v1
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@16c0bc4a6e6ada2cfd8afd41d22d95379cf7c32a # @v1
uses: docker/setup-buildx-action@4c0219f9ac95b02789c1075625400b2acbff50b1 # @v1
- name: Log in to GitHub Container Registry
uses: docker/login-action@465a07811f14bebb1938fbed4728c6a1ff8901fc # @v1

View File

@@ -1,3 +1,21 @@
# v0.20.1 (2023-07-10)
## Spack Bugfixes
- Spec removed from an environment where not actually removed if `--force` was not given (#37877)
- Speed-up module file generation (#37739)
- Hotfix for a few recipes that treat CMake as a link dependency (#35816)
- Fix re-running stand-alone test a second time, which was getting a trailing spurious failure (#37840)
- Fixed reading JSON manifest on Cray, reporting non-concrete specs (#37909)
- Fixed a few bugs when generating Dockerfiles from Spack (#37766,#37769)
- Fixed a few long-standing bugs when generating module files (#36678,#38347,#38465,#38455)
- Fixed issues with building Python extensions using an external Python (#38186)
- Fixed compiler removal from command line (#38057)
- Show external status as [e] (#33792)
- Backported `archspec` fixes (#37793)
- Improved a few error messages (#37791)
# v0.20.0 (2023-05-21)
`v0.20.0` is a major feature release.

View File

@@ -25,8 +25,6 @@ exit 1
# Line above is a shell no-op, and ends a python multi-line comment.
# The code above runs this file with our preferred python interpreter.
from __future__ import print_function
import os
import os.path
import sys

View File

@@ -216,10 +216,11 @@ config:
# manipulation by unprivileged user (e.g. AFS)
allow_sgid: true
# Whether to set the terminal title to display status information during
# building and installing packages. This gives information about Spack's
# current progress as well as the current and total number of packages.
terminal_title: false
# Whether to show status information during building and installing packages.
# This gives information about Spack's current progress as well as the current
# and total number of packages. Information is shown both in the terminal
# title and inline.
install_status: true
# Number of seconds a buildcache's index.json is cached locally before probing
# for updates, within a single Spack invocation. Defaults to 10 minutes.

View File

@@ -1,2 +1,4 @@
mirrors:
spack-public: https://mirror.spack.io
spack-public:
binary: false
url: https://mirror.spack.io

View File

@@ -76,6 +76,53 @@ To build with with ``icx``, do ::
spack install patchelf%oneapi
Using oneAPI Spack environment
-------------------------------
In this example, we build lammps with ``icx`` using Spack environment for oneAPI packages created by Intel. The
compilers are installed with Spack like in example above.
Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so Spack can use them::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
Verify that the compilers are available::
spack compiler list
Clone `spack-configs <https://github.com/spack/spack-configs>`_ repo and activate Intel oneAPI CPU environment::
git clone https://github.com/spack/spack-configs
spack env activate spack-configs/INTEL/CPU
spack concretize -f
`Intel oneAPI CPU environment <https://github.com/spack/spack-configs/blob/main/INTEL/CPU/spack.yaml>`_ contains applications tested and validated by Intel, this list is constantly extended. And currently it supports:
- `GROMACS <https://www.gromacs.org/>`_
- `HPCG <https://www.hpcg-benchmark.org/>`_
- `HPL <https://netlib.org/benchmark/hpl/>`_
- `LAMMPS <https://www.lammps.org/#gsc.tab=0>`_
- `OpenFOAM <https://www.openfoam.com/>`_
- `STREAM <https://www.cs.virginia.edu/stream/>`_
- `WRF <https://github.com/wrf-model/WRF>`_
To build lammps with oneAPI compiler from this environment just run::
spack install lammps
Compiled binaries can be find using::
spack cd -i lammps
You can do the same for all other applications from this environment.
Using oneAPI MPI to Satisfy a Virtual Dependence
------------------------------------------------------

View File

@@ -72,7 +72,7 @@ arguments to the configure phase, you can use:
.. code-block:: python
def configure_args(self, spec, prefix):
def configure_args(self):
return ['--no-python-dbus']

View File

@@ -97,9 +97,7 @@ class PatchedPythonDomain(PythonDomain):
def resolve_xref(self, env, fromdocname, builder, typ, target, node, contnode):
if "refspecific" in node:
del node["refspecific"]
return super(PatchedPythonDomain, self).resolve_xref(
env, fromdocname, builder, typ, target, node, contnode
)
return super().resolve_xref(env, fromdocname, builder, typ, target, node, contnode)
#

View File

@@ -292,12 +292,13 @@ It is also worth noting that:
non_bindable_shared_objects = ["libinterface.so"]
----------------------
``terminal_title``
``install_status``
----------------------
By setting this option to ``true``, Spack will update the terminal's title to
provide information about its current progress as well as the current and
total package numbers.
When set to ``true``, Spack will show information about its current progress
as well as the current and total package numbers. Progress is shown both
in the terminal title and inline. Setting it to ``false`` will not show any
progress information.
To work properly, this requires your terminal to reset its title after
Spack has finished its work, otherwise Spack's status information will

View File

@@ -275,10 +275,12 @@ of the installed software. For instance, in the snippet below:
set:
BAR: 'bar'
# This anonymous spec selects any package that
# depends on openmpi. The double colon at the
# depends on mpi. The double colon at the
# end clears the set of rules that matched so far.
^openmpi::
^mpi::
environment:
prepend_path:
PATH: '{^mpi.prefix}/bin'
set:
BAR: 'baz'
# Selects any zlib package
@@ -293,7 +295,9 @@ of the installed software. For instance, in the snippet below:
- FOOBAR
you are instructing Spack to set the environment variable ``BAR=bar`` for every module,
unless the associated spec satisfies ``^openmpi`` in which case ``BAR=baz``.
unless the associated spec satisfies the abstract dependency ``^mpi`` in which case
``BAR=baz``, and the directory containing the respective MPI executables is prepended
to the ``PATH`` variable.
In addition in any spec that satisfies ``zlib`` the value ``foo`` will be
prepended to ``LD_LIBRARY_PATH`` and in any spec that satisfies ``zlib%gcc@4.8``
the variable ``FOOBAR`` will be unset.

View File

@@ -121,7 +121,7 @@ Since v0.19, Spack supports two ways of writing a package recipe. The most comm
def url_for_version(self, version):
if version >= Version("2.1.1"):
return super(Openjpeg, self).url_for_version(version)
return super().url_for_version(version)
url_fmt = "https://github.com/uclouvain/openjpeg/archive/version.{0}.tar.gz"
return url_fmt.format(version)
@@ -155,7 +155,7 @@ builder class explicitly. Using the same example as above, this reads:
def url_for_version(self, version):
if version >= Version("2.1.1"):
return super(Openjpeg, self).url_for_version(version)
return super().url_for_version(version)
url_fmt = "https://github.com/uclouvain/openjpeg/archive/version.{0}.tar.gz"
return url_fmt.format(version)

View File

@@ -65,9 +65,6 @@
up to date with CTest, just make sure the ``*_matches`` and
``*_exceptions`` lists are kept up to date with CTest's build handler.
"""
from __future__ import print_function
from __future__ import division
import re
import math
import multiprocessing
@@ -211,7 +208,7 @@
]
class LogEvent(object):
class LogEvent:
"""Class representing interesting events (e.g., errors) in a build log."""
def __init__(self, text, line_no,
source_file=None, source_line_no=None,
@@ -348,7 +345,7 @@ def _parse_unpack(args):
return _parse(*args)
class CTestLogParser(object):
class CTestLogParser:
"""Log file parser that extracts errors and warnings."""
def __init__(self, profile=False):
# whether to record timing information

View File

@@ -3,33 +3,42 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import abc
import argparse
import errno
import io
import re
import sys
from argparse import ArgumentParser
from typing import IO, Optional, Sequence, Tuple
class Command(object):
class Command:
"""Parsed representation of a command from argparse.
This is a single command from an argparse parser. ``ArgparseWriter``
creates these and returns them from ``parse()``, and it passes one of
these to each call to ``format()`` so that we can take an action for
a single command.
Parts of a Command:
- prog: command name (str)
- description: command description (str)
- usage: command usage (str)
- positionals: list of positional arguments (list)
- optionals: list of optional arguments (list)
- subcommands: list of subcommand parsers (list)
This is a single command from an argparse parser. ``ArgparseWriter`` creates these and returns
them from ``parse()``, and it passes one of these to each call to ``format()`` so that we can
take an action for a single command.
"""
def __init__(self, prog, description, usage, positionals, optionals, subcommands):
def __init__(
self,
prog: str,
description: Optional[str],
usage: str,
positionals: Sequence[Tuple[str, str]],
optionals: Sequence[Tuple[Sequence[str], str, str]],
subcommands: Sequence[Tuple[ArgumentParser, str]],
) -> None:
"""Initialize a new Command instance.
Args:
prog: Program name.
description: Command description.
usage: Command usage.
positionals: List of positional arguments.
optionals: List of optional arguments.
subcommands: List of subcommand parsers.
"""
self.prog = prog
self.description = description
self.usage = usage
@@ -38,35 +47,34 @@ def __init__(self, prog, description, usage, positionals, optionals, subcommands
self.subcommands = subcommands
# NOTE: The only reason we subclass argparse.HelpFormatter is to get access
# to self._expand_help(), ArgparseWriter is not intended to be used as a
# formatter_class.
class ArgparseWriter(argparse.HelpFormatter):
"""Analyzes an argparse ArgumentParser for easy generation of help."""
# NOTE: The only reason we subclass argparse.HelpFormatter is to get access to self._expand_help(),
# ArgparseWriter is not intended to be used as a formatter_class.
class ArgparseWriter(argparse.HelpFormatter, abc.ABC):
"""Analyze an argparse ArgumentParser for easy generation of help."""
def __init__(self, prog, out=None, aliases=False):
"""Initializes a new ArgparseWriter instance.
def __init__(self, prog: str, out: IO = sys.stdout, aliases: bool = False) -> None:
"""Initialize a new ArgparseWriter instance.
Parameters:
prog (str): the program name
out (file object): the file to write to (default sys.stdout)
aliases (bool): whether or not to include subparsers for aliases
Args:
prog: Program name.
out: File object to write to.
aliases: Whether or not to include subparsers for aliases.
"""
super(ArgparseWriter, self).__init__(prog)
super().__init__(prog)
self.level = 0
self.prog = prog
self.out = sys.stdout if out is None else out
self.out = out
self.aliases = aliases
def parse(self, parser, prog):
"""Parses the parser object and returns the relavent components.
def parse(self, parser: ArgumentParser, prog: str) -> Command:
"""Parse the parser object and return the relavent components.
Parameters:
parser (argparse.ArgumentParser): the parser
prog (str): the command name
Args:
parser: Command parser.
prog: Program name.
Returns:
(Command) information about the command from the parser
Information about the command from the parser.
"""
self.parser = parser
@@ -80,8 +88,7 @@ def parse(self, parser, prog):
groups = parser._mutually_exclusive_groups
usage = fmt._format_usage(None, actions, groups, "").strip()
# Go through actions and split them into optionals, positionals,
# and subcommands
# Go through actions and split them into optionals, positionals, and subcommands
optionals = []
positionals = []
subcommands = []
@@ -98,7 +105,7 @@ def parse(self, parser, prog):
subcommands.append((subparser, subaction.dest))
# Look for aliases of the form 'name (alias, ...)'
if self.aliases:
if self.aliases and isinstance(subaction.metavar, str):
match = re.match(r"(.*) \((.*)\)", subaction.metavar)
if match:
aliases = match.group(2).split(", ")
@@ -113,28 +120,26 @@ def parse(self, parser, prog):
return Command(prog, description, usage, positionals, optionals, subcommands)
def format(self, cmd):
"""Returns the string representation of a single node in the
parser tree.
@abc.abstractmethod
def format(self, cmd: Command) -> str:
"""Return the string representation of a single node in the parser tree.
Override this in subclasses to define how each subcommand
should be displayed.
Override this in subclasses to define how each subcommand should be displayed.
Parameters:
(Command): parsed information about a command or subcommand
Args:
cmd: Parsed information about a command or subcommand.
Returns:
str: the string representation of this subcommand
String representation of this subcommand.
"""
raise NotImplementedError
def _write(self, parser, prog, level=0):
"""Recursively writes a parser.
def _write(self, parser: ArgumentParser, prog: str, level: int = 0) -> None:
"""Recursively write a parser.
Parameters:
parser (argparse.ArgumentParser): the parser
prog (str): the command name
level (int): the current level
Args:
parser: Command parser.
prog: Program name.
level: Current level.
"""
self.level = level
@@ -144,19 +149,17 @@ def _write(self, parser, prog, level=0):
for subparser, prog in cmd.subcommands:
self._write(subparser, prog, level=level + 1)
def write(self, parser):
def write(self, parser: ArgumentParser) -> None:
"""Write out details about an ArgumentParser.
Args:
parser (argparse.ArgumentParser): the parser
parser: Command parser.
"""
try:
self._write(parser, self.prog)
except IOError as e:
except BrokenPipeError:
# Swallow pipe errors
# Raises IOError in Python 2 and BrokenPipeError in Python 3
if e.errno != errno.EPIPE:
raise
pass
_rst_levels = ["=", "-", "^", "~", ":", "`"]
@@ -165,21 +168,33 @@ def write(self, parser):
class ArgparseRstWriter(ArgparseWriter):
"""Write argparse output as rst sections."""
def __init__(self, prog, out=None, aliases=False, rst_levels=_rst_levels):
"""Create a new ArgparseRstWriter.
def __init__(
self,
prog: str,
out: IO = sys.stdout,
aliases: bool = False,
rst_levels: Sequence[str] = _rst_levels,
) -> None:
"""Initialize a new ArgparseRstWriter instance.
Parameters:
prog (str): program name
out (file object): file to write to
aliases (bool): whether or not to include subparsers for aliases
rst_levels (list of str): list of characters
for rst section headings
Args:
prog: Program name.
out: File object to write to.
aliases: Whether or not to include subparsers for aliases.
rst_levels: List of characters for rst section headings.
"""
out = sys.stdout if out is None else out
super(ArgparseRstWriter, self).__init__(prog, out, aliases)
super().__init__(prog, out, aliases)
self.rst_levels = rst_levels
def format(self, cmd):
def format(self, cmd: Command) -> str:
"""Return the string representation of a single node in the parser tree.
Args:
cmd: Parsed information about a command or subcommand.
Returns:
String representation of a node.
"""
string = io.StringIO()
string.write(self.begin_command(cmd.prog))
@@ -205,7 +220,15 @@ def format(self, cmd):
return string.getvalue()
def begin_command(self, prog):
def begin_command(self, prog: str) -> str:
"""Text to print before a command.
Args:
prog: Program name.
Returns:
Text before a command.
"""
return """
----
@@ -218,10 +241,26 @@ def begin_command(self, prog):
prog.replace(" ", "-"), prog, self.rst_levels[self.level] * len(prog)
)
def description(self, description):
def description(self, description: str) -> str:
"""Description of a command.
Args:
description: Command description.
Returns:
Description of a command.
"""
return description + "\n\n"
def usage(self, usage):
def usage(self, usage: str) -> str:
"""Example usage of a command.
Args:
usage: Command usage.
Returns:
Usage of a command.
"""
return """\
.. code-block:: console
@@ -231,10 +270,24 @@ def usage(self, usage):
usage
)
def begin_positionals(self):
def begin_positionals(self) -> str:
"""Text to print before positional arguments.
Returns:
Positional arguments header.
"""
return "\n**Positional arguments**\n\n"
def positional(self, name, help):
def positional(self, name: str, help: str) -> str:
"""Description of a positional argument.
Args:
name: Argument name.
help: Help text.
Returns:
Positional argument description.
"""
return """\
{0}
{1}
@@ -243,13 +296,32 @@ def positional(self, name, help):
name, help
)
def end_positionals(self):
def end_positionals(self) -> str:
"""Text to print after positional arguments.
Returns:
Positional arguments footer.
"""
return ""
def begin_optionals(self):
def begin_optionals(self) -> str:
"""Text to print before optional arguments.
Returns:
Optional arguments header.
"""
return "\n**Optional arguments**\n\n"
def optional(self, opts, help):
def optional(self, opts: str, help: str) -> str:
"""Description of an optional argument.
Args:
opts: Optional argument.
help: Help text.
Returns:
Optional argument description.
"""
return """\
``{0}``
{1}
@@ -258,10 +330,23 @@ def optional(self, opts, help):
opts, help
)
def end_optionals(self):
def end_optionals(self) -> str:
"""Text to print after optional arguments.
Returns:
Optional arguments footer.
"""
return ""
def begin_subcommands(self, subcommands):
def begin_subcommands(self, subcommands: Sequence[Tuple[ArgumentParser, str]]) -> str:
"""Table with links to other subcommands.
Arguments:
subcommands: List of subcommands.
Returns:
Subcommand linking text.
"""
string = """
**Subcommands**
@@ -280,29 +365,25 @@ def begin_subcommands(self, subcommands):
class ArgparseCompletionWriter(ArgparseWriter):
"""Write argparse output as shell programmable tab completion functions."""
def format(self, cmd):
"""Returns the string representation of a single node in the
parser tree.
def format(self, cmd: Command) -> str:
"""Return the string representation of a single node in the parser tree.
Override this in subclasses to define how each subcommand
should be displayed.
Parameters:
(Command): parsed information about a command or subcommand
Args:
cmd: Parsed information about a command or subcommand.
Returns:
str: the string representation of this subcommand
String representation of this subcommand.
"""
assert cmd.optionals # we should always at least have -h, --help
assert not (cmd.positionals and cmd.subcommands) # one or the other
# We only care about the arguments/flags, not the help messages
positionals = []
positionals: Tuple[str, ...] = ()
if cmd.positionals:
positionals, _ = zip(*cmd.positionals)
optionals, _, _ = zip(*cmd.optionals)
subcommands = []
subcommands: Tuple[str, ...] = ()
if cmd.subcommands:
_, subcommands = zip(*cmd.subcommands)
@@ -315,71 +396,73 @@ def format(self, cmd):
+ self.end_function(cmd.prog)
)
def start_function(self, prog):
"""Returns the syntax needed to begin a function definition.
def start_function(self, prog: str) -> str:
"""Return the syntax needed to begin a function definition.
Parameters:
prog (str): the command name
Args:
prog: Program name.
Returns:
str: the function definition beginning
Function definition beginning.
"""
name = prog.replace("-", "_").replace(" ", "_")
return "\n_{0}() {{".format(name)
def end_function(self, prog=None):
"""Returns the syntax needed to end a function definition.
def end_function(self, prog: str) -> str:
"""Return the syntax needed to end a function definition.
Parameters:
prog (str or None): the command name
Args:
prog: Program name
Returns:
str: the function definition ending
Function definition ending.
"""
return "}\n"
def body(self, positionals, optionals, subcommands):
"""Returns the body of the function.
def body(
self, positionals: Sequence[str], optionals: Sequence[str], subcommands: Sequence[str]
) -> str:
"""Return the body of the function.
Parameters:
positionals (list): list of positional arguments
optionals (list): list of optional arguments
subcommands (list): list of subcommand parsers
Args:
positionals: List of positional arguments.
optionals: List of optional arguments.
subcommands: List of subcommand parsers.
Returns:
str: the function body
Function body.
"""
return ""
def positionals(self, positionals):
"""Returns the syntax for reporting positional arguments.
def positionals(self, positionals: Sequence[str]) -> str:
"""Return the syntax for reporting positional arguments.
Parameters:
positionals (list): list of positional arguments
Args:
positionals: List of positional arguments.
Returns:
str: the syntax for positional arguments
Syntax for positional arguments.
"""
return ""
def optionals(self, optionals):
"""Returns the syntax for reporting optional flags.
def optionals(self, optionals: Sequence[str]) -> str:
"""Return the syntax for reporting optional flags.
Parameters:
optionals (list): list of optional arguments
Args:
optionals: List of optional arguments.
Returns:
str: the syntax for optional flags
Syntax for optional flags.
"""
return ""
def subcommands(self, subcommands):
"""Returns the syntax for reporting subcommands.
def subcommands(self, subcommands: Sequence[str]) -> str:
"""Return the syntax for reporting subcommands.
Parameters:
subcommands (list): list of subcommand parsers
Args:
subcommands: List of subcommand parsers.
Returns:
str: the syntax for subcommand parsers
Syntax for subcommand parsers
"""
return ""

View File

@@ -402,7 +402,7 @@ def groupid_to_group(x):
os.remove(backup_filename)
class FileFilter(object):
class FileFilter:
"""Convenience class for calling ``filter_file`` a lot."""
def __init__(self, *filenames):
@@ -610,6 +610,8 @@ def chgrp(path, group, follow_symlinks=True):
gid = grp.getgrnam(group).gr_gid
else:
gid = group
if os.stat(path).st_gid == gid:
return
if follow_symlinks:
os.chown(path, -1, gid)
else:
@@ -1336,7 +1338,7 @@ def lexists_islink_isdir(path):
return True, is_link, is_dir
class BaseDirectoryVisitor(object):
class BaseDirectoryVisitor:
"""Base class and interface for :py:func:`visit_directory_tree`."""
def visit_file(self, root, rel_path, depth):
@@ -1890,7 +1892,7 @@ class HeaderList(FileList):
include_regex = re.compile(r"(.*?)(\binclude\b)(.*)")
def __init__(self, files):
super(HeaderList, self).__init__(files)
super().__init__(files)
self._macro_definitions = []
self._directories = None
@@ -1916,7 +1918,7 @@ def _default_directories(self):
"""Default computation of directories based on the list of
header files.
"""
dir_list = super(HeaderList, self).directories
dir_list = super().directories
values = []
for d in dir_list:
# If the path contains a subdirectory named 'include' then stop
@@ -2352,7 +2354,7 @@ def find_all_libraries(root, recursive=False):
)
class WindowsSimulatedRPath(object):
class WindowsSimulatedRPath:
"""Class representing Windows filesystem rpath analog
One instance of this class is associated with a package (only on Windows)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import division
import collections.abc
import contextlib
import functools
@@ -768,10 +766,10 @@ def pretty_seconds(seconds):
class RequiredAttributeError(ValueError):
def __init__(self, message):
super(RequiredAttributeError, self).__init__(message)
super().__init__(message)
class ObjectWrapper(object):
class ObjectWrapper:
"""Base class that wraps an object. Derived classes can add new behavior
while staying undercover.
@@ -798,7 +796,7 @@ def __init__(self, wrapped_object):
self.__dict__ = wrapped_object.__dict__
class Singleton(object):
class Singleton:
"""Simple wrapper for lazily initialized singleton objects."""
def __init__(self, factory):
@@ -845,7 +843,7 @@ def __repr__(self):
return repr(self.instance)
class LazyReference(object):
class LazyReference:
"""Lazily evaluated reference to part of a singleton."""
def __init__(self, ref_function):
@@ -943,7 +941,7 @@ def _wrapper(args):
return _wrapper
class Devnull(object):
class Devnull:
"""Null stream with less overhead than ``os.devnull``.
See https://stackoverflow.com/a/2929954.
@@ -1060,7 +1058,7 @@ def __str__(self):
return str(self.data)
class GroupedExceptionHandler(object):
class GroupedExceptionHandler:
"""A generic mechanism to coalesce multiple exceptions and preserve tracebacks."""
def __init__(self):
@@ -1091,7 +1089,7 @@ def grouped_message(self, with_tracebacks: bool = True) -> str:
return "due to the following failures:\n{0}".format("\n".join(each_exception_message))
class GroupedExceptionForwarder(object):
class GroupedExceptionForwarder:
"""A contextmanager to capture exceptions and forward them to a
GroupedExceptionHandler."""
@@ -1111,7 +1109,7 @@ def __exit__(self, exc_type, exc_value, tb):
return True
class classproperty(object):
class classproperty:
"""Non-data descriptor to evaluate a class-level property. The function that performs
the evaluation is injected at creation time and take an instance (could be None) and
an owner (i.e. the class that originated the instance)

View File

@@ -5,8 +5,6 @@
"""LinkTree class for setting up trees of symbolic links."""
from __future__ import print_function
import filecmp
import os
import shutil
@@ -287,7 +285,7 @@ def visit_symlinked_file(self, root, rel_path, depth):
self.visit_file(root, rel_path, depth)
class LinkTree(object):
class LinkTree:
"""Class to create trees of symbolic links from a source directory.
LinkTree objects are constructed with a source root. Their
@@ -432,12 +430,12 @@ class MergeConflictError(Exception):
class ConflictingSpecsError(MergeConflictError):
def __init__(self, spec_1, spec_2):
super(MergeConflictError, self).__init__(spec_1, spec_2)
super().__init__(spec_1, spec_2)
class SingleMergeConflictError(MergeConflictError):
def __init__(self, path):
super(MergeConflictError, self).__init__("Package merge blocked by file: %s" % path)
super().__init__("Package merge blocked by file: %s" % path)
class MergeConflictSummary(MergeConflictError):
@@ -452,4 +450,4 @@ def __init__(self, conflicts):
msg += "\n `{0}` and `{1}` both project to `{2}`".format(
conflict.src_a, conflict.src_b, conflict.dst
)
super(MergeConflictSummary, self).__init__(msg)
super().__init__(msg)

View File

@@ -39,7 +39,7 @@
true_fn = lambda: True
class OpenFile(object):
class OpenFile:
"""Record for keeping track of open lockfiles (with reference counting).
There's really only one ``OpenFile`` per inode, per process, but we record the
@@ -53,7 +53,7 @@ def __init__(self, fh):
self.refs = 0
class OpenFileTracker(object):
class OpenFileTracker:
"""Track open lockfiles, to minimize number of open file descriptors.
The ``fcntl`` locks that Spack uses are associated with an inode and a process.
@@ -169,7 +169,7 @@ def _attempts_str(wait_time, nattempts):
return " after {} and {}".format(pretty_seconds(wait_time), attempts)
class LockType(object):
class LockType:
READ = 0
WRITE = 1
@@ -192,7 +192,7 @@ def is_valid(op):
return op == LockType.READ or op == LockType.WRITE
class Lock(object):
class Lock:
"""This is an implementation of a filesystem lock using Python's lockf.
In Python, ``lockf`` actually calls ``fcntl``, so this should work with
@@ -681,7 +681,7 @@ def _status_msg(self, locktype, status):
)
class LockTransaction(object):
class LockTransaction:
"""Simple nested transaction context manager that uses a file lock.
Arguments:
@@ -770,7 +770,7 @@ class LockDowngradeError(LockError):
def __init__(self, path):
msg = "Cannot downgrade lock from write to read on file: %s" % path
super(LockDowngradeError, self).__init__(msg)
super().__init__(msg)
class LockLimitError(LockError):
@@ -782,7 +782,7 @@ class LockTimeoutError(LockError):
def __init__(self, lock_type, path, time, attempts):
fmt = "Timed out waiting for a {} lock after {}.\n Made {} {} on file: {}"
super(LockTimeoutError, self).__init__(
super().__init__(
fmt.format(
lock_type,
pretty_seconds(time),
@@ -798,7 +798,7 @@ class LockUpgradeError(LockError):
def __init__(self, path):
msg = "Cannot upgrade lock from read to write on file: %s" % path
super(LockUpgradeError, self).__init__(msg)
super().__init__(msg)
class LockPermissionError(LockError):
@@ -810,7 +810,7 @@ class LockROFileError(LockPermissionError):
def __init__(self, path):
msg = "Can't take write lock on read-only file: %s" % path
super(LockROFileError, self).__init__(msg)
super().__init__(msg)
class CantCreateLockError(LockPermissionError):
@@ -819,4 +819,4 @@ class CantCreateLockError(LockPermissionError):
def __init__(self, path):
msg = "cannot create lock '%s': " % path
msg += "file does not exist and location is not writable"
super(LockError, self).__init__(msg)
super().__init__(msg)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import unicode_literals
import contextlib
import io
import os

View File

@@ -6,8 +6,6 @@
"""
Routines for printing columnar output. See ``colify()`` for more information.
"""
from __future__ import division, unicode_literals
import io
import os
import sys

View File

@@ -59,8 +59,6 @@
To output an @, use '@@'. To output a } inside braces, use '}}'.
"""
from __future__ import unicode_literals
import re
import sys
from contextlib import contextmanager
@@ -70,7 +68,7 @@ class ColorParseError(Exception):
"""Raised when a color format fails to parse."""
def __init__(self, message):
super(ColorParseError, self).__init__(message)
super().__init__(message)
# Text styles for ansi codes
@@ -205,7 +203,7 @@ def color_when(value):
set_color_when(old_value)
class match_to_ansi(object):
class match_to_ansi:
def __init__(self, color=True, enclose=False):
self.color = _color_when_value(color)
self.enclose = enclose
@@ -321,7 +319,7 @@ def cescape(string):
return string
class ColorStream(object):
class ColorStream:
def __init__(self, stream, color=None):
self._stream = stream
self._color = color

View File

@@ -5,8 +5,6 @@
"""Utility classes for logging the output of blocks of code.
"""
from __future__ import unicode_literals
import atexit
import ctypes
import errno
@@ -67,7 +65,7 @@ def _strip(line):
return _escape.sub("", line)
class keyboard_input(object):
class keyboard_input:
"""Context manager to disable line editing and echoing.
Use this with ``sys.stdin`` for keyboard input, e.g.::
@@ -244,7 +242,7 @@ def __exit__(self, exc_type, exception, traceback):
signal.signal(signum, old_handler)
class Unbuffered(object):
class Unbuffered:
"""Wrapper for Python streams that forces them to be unbuffered.
This is implemented by forcing a flush after each write.
@@ -289,7 +287,7 @@ def _file_descriptors_work(*streams):
return False
class FileWrapper(object):
class FileWrapper:
"""Represents a file. Can be an open stream, a path to a file (not opened
yet), or neither. When unwrapped, it returns an open file (or file-like)
object.
@@ -331,7 +329,7 @@ def close(self):
self.file.close()
class MultiProcessFd(object):
class MultiProcessFd:
"""Return an object which stores a file descriptor and can be passed as an
argument to a function run with ``multiprocessing.Process``, such that
the file descriptor is available in the subprocess."""
@@ -431,7 +429,7 @@ def log_output(*args, **kwargs):
return nixlog(*args, **kwargs)
class nixlog(object):
class nixlog:
"""
Under the hood, we spawn a daemon and set up a pipe between this
process and the daemon. The daemon writes our output to both the
@@ -752,7 +750,7 @@ def close(self):
os.close(self.saved_stream)
class winlog(object):
class winlog:
"""
Similar to nixlog, with underlying
functionality ported to support Windows.

View File

@@ -13,8 +13,6 @@
Note: The functionality in this module is unsupported on Windows
"""
from __future__ import print_function
import multiprocessing
import os
import re
@@ -36,7 +34,7 @@
pass
class ProcessController(object):
class ProcessController:
"""Wrapper around some fundamental process control operations.
This allows one process (the controller) to drive another (the
@@ -157,7 +155,7 @@ def wait_running(self):
self.wait(lambda: "T" not in self.proc_status())
class PseudoShell(object):
class PseudoShell:
"""Sets up controller and minion processes with a PTY.
You can create a ``PseudoShell`` if you want to test how some

View File

@@ -13,7 +13,7 @@
from spack.util.executable import Executable, ProcessError
class ABI(object):
class ABI:
"""This class provides methods to test ABI compatibility between specs.
The current implementation is rather rough and could be improved."""

View File

@@ -60,7 +60,7 @@ def _search_duplicate_compilers(error_cls):
GROUPS = collections.defaultdict(list)
class Error(object):
class Error:
"""Information on an error reported in a test."""
def __init__(self, summary, details):
@@ -725,11 +725,22 @@ def _version_constraints_are_satisfiable_by_some_version_in_repo(pkgs, error_cls
dependencies_to_check.extend([edge.spec for edge in dependency_data.values()])
host_architecture = spack.spec.ArchSpec.default_arch()
for s in dependencies_to_check:
dependency_pkg_cls = None
try:
dependency_pkg_cls = spack.repo.path.get_pkg_class(s.name)
assert any(v.intersects(s.versions) for v in list(dependency_pkg_cls.versions))
# Some packages have hacks that might cause failures on some platform
# Allow to explicitly set conditions to skip version checks in that case
skip_conditions = getattr(dependency_pkg_cls, "skip_version_audit", [])
skip_version_check = False
for condition in skip_conditions:
if host_architecture.satisfies(spack.spec.Spec(condition).architecture):
skip_version_check = True
break
assert skip_version_check or any(
v.intersects(s.versions) for v in list(dependency_pkg_cls.versions)
)
except Exception:
summary = (
"{0}: dependency on {1} cannot be satisfied " "by known versions of {1.name}"

View File

@@ -80,14 +80,14 @@ def __init__(self, errors):
else:
err = errors[0]
self.message = "{0}: {1}".format(err.__class__.__name__, str(err))
super(FetchCacheError, self).__init__(self.message)
super().__init__(self.message)
class ListMirrorSpecsError(spack.error.SpackError):
"""Raised when unable to retrieve list of specs from the mirror"""
class BinaryCacheIndex(object):
class BinaryCacheIndex:
"""
The BinaryCacheIndex tracks what specs are available on (usually remote)
binary caches.
@@ -317,9 +317,9 @@ def update(self, with_cooldown=False):
from each configured mirror and stored locally (both in memory and
on disk under ``_index_cache_root``)."""
self._init_local_index_cache()
mirrors = spack.mirror.MirrorCollection()
configured_mirror_urls = [m.fetch_url for m in mirrors.values()]
configured_mirror_urls = [
m.fetch_url for m in spack.mirror.MirrorCollection(binary=True).values()
]
items_to_remove = []
spec_cache_clear_needed = False
spec_cache_regenerate_needed = not self._mirrors_for_spec
@@ -517,9 +517,7 @@ class NoOverwriteException(spack.error.SpackError):
"""Raised when a file would be overwritten"""
def __init__(self, file_path):
super(NoOverwriteException, self).__init__(
f"Refusing to overwrite the following file: {file_path}"
)
super().__init__(f"Refusing to overwrite the following file: {file_path}")
class NoGpgException(spack.error.SpackError):
@@ -528,7 +526,7 @@ class NoGpgException(spack.error.SpackError):
"""
def __init__(self, msg):
super(NoGpgException, self).__init__(msg)
super().__init__(msg)
class NoKeyException(spack.error.SpackError):
@@ -537,7 +535,7 @@ class NoKeyException(spack.error.SpackError):
"""
def __init__(self, msg):
super(NoKeyException, self).__init__(msg)
super().__init__(msg)
class PickKeyException(spack.error.SpackError):
@@ -548,7 +546,7 @@ class PickKeyException(spack.error.SpackError):
def __init__(self, keys):
err_msg = "Multiple keys available for signing\n%s\n" % keys
err_msg += "Use spack buildcache create -k <key hash> to pick a key."
super(PickKeyException, self).__init__(err_msg)
super().__init__(err_msg)
class NoVerifyException(spack.error.SpackError):
@@ -565,7 +563,7 @@ class NoChecksumException(spack.error.SpackError):
"""
def __init__(self, path, size, contents, algorithm, expected, computed):
super(NoChecksumException, self).__init__(
super().__init__(
f"{algorithm} checksum failed for {path}",
f"Expected {expected} but got {computed}. "
f"File size = {size} bytes. Contents = {contents!r}",
@@ -578,7 +576,7 @@ class NewLayoutException(spack.error.SpackError):
"""
def __init__(self, msg):
super(NewLayoutException, self).__init__(msg)
super().__init__(msg)
class UnsignedPackageException(spack.error.SpackError):
@@ -1467,8 +1465,9 @@ def download_tarball(spec, unsigned=False, mirrors_for_spec=None):
"signature_verified": "true-if-binary-pkg-was-already-verified"
}
"""
if not spack.mirror.MirrorCollection():
tty.die("Please add a spack mirror to allow " + "download of pre-compiled packages.")
configured_mirrors = spack.mirror.MirrorCollection(binary=True).values()
if not configured_mirrors:
tty.die("Please add a spack mirror to allow download of pre-compiled packages.")
tarball = tarball_path_name(spec, ".spack")
specfile_prefix = tarball_name(spec, ".spec")
@@ -1485,11 +1484,7 @@ def download_tarball(spec, unsigned=False, mirrors_for_spec=None):
# we need was in an un-indexed mirror. No need to check any
# mirror for the spec twice though.
try_first = [i["mirror_url"] for i in mirrors_for_spec] if mirrors_for_spec else []
try_next = [
i.fetch_url
for i in spack.mirror.MirrorCollection().values()
if i.fetch_url not in try_first
]
try_next = [i.fetch_url for i in configured_mirrors if i.fetch_url not in try_first]
for url in try_first + try_next:
mirrors_to_try.append(
@@ -1982,7 +1977,9 @@ def try_direct_fetch(spec, mirrors=None):
specfile_is_signed = False
found_specs = []
for mirror in spack.mirror.MirrorCollection(mirrors=mirrors).values():
binary_mirrors = spack.mirror.MirrorCollection(mirrors=mirrors, binary=True).values()
for mirror in binary_mirrors:
buildcache_fetch_url_json = url_util.join(
mirror.fetch_url, _build_cache_relative_path, specfile_name
)
@@ -2045,7 +2042,7 @@ def get_mirrors_for_spec(spec=None, mirrors_to_check=None, index_only=False):
if spec is None:
return []
if not spack.mirror.MirrorCollection(mirrors=mirrors_to_check):
if not spack.mirror.MirrorCollection(mirrors=mirrors_to_check, binary=True):
tty.debug("No Spack mirrors are currently configured")
return {}
@@ -2084,7 +2081,7 @@ def clear_spec_cache():
def get_keys(install=False, trust=False, force=False, mirrors=None):
"""Get pgp public keys available on mirror with suffix .pub"""
mirror_collection = mirrors or spack.mirror.MirrorCollection()
mirror_collection = mirrors or spack.mirror.MirrorCollection(binary=True)
if not mirror_collection:
tty.die("Please add a spack mirror to allow " + "download of build caches.")
@@ -2245,7 +2242,7 @@ def check_specs_against_mirrors(mirrors, specs, output_file=None):
"""
rebuilds = {}
for mirror in spack.mirror.MirrorCollection(mirrors).values():
for mirror in spack.mirror.MirrorCollection(mirrors, binary=True).values():
tty.debug("Checking for built specs at {0}".format(mirror.fetch_url))
rebuild_list = []
@@ -2289,7 +2286,7 @@ def _download_buildcache_entry(mirror_root, descriptions):
def download_buildcache_entry(file_descriptions, mirror_url=None):
if not mirror_url and not spack.mirror.MirrorCollection():
if not mirror_url and not spack.mirror.MirrorCollection(binary=True):
tty.die(
"Please provide or add a spack mirror to allow " + "download of buildcache entries."
)
@@ -2298,7 +2295,7 @@ def download_buildcache_entry(file_descriptions, mirror_url=None):
mirror_root = os.path.join(mirror_url, _build_cache_relative_path)
return _download_buildcache_entry(mirror_root, file_descriptions)
for mirror in spack.mirror.MirrorCollection().values():
for mirror in spack.mirror.MirrorCollection(binary=True).values():
mirror_root = os.path.join(mirror.fetch_url, _build_cache_relative_path)
if _download_buildcache_entry(mirror_root, file_descriptions):
@@ -2337,7 +2334,7 @@ def download_single_spec(concrete_spec, destination, mirror_url=None):
return download_buildcache_entry(files_to_fetch, mirror_url)
class BinaryCacheQuery(object):
class BinaryCacheQuery:
"""Callable object to query if a spec is in a binary cache"""
def __init__(self, all_architectures):

View File

@@ -148,7 +148,7 @@ class MakeExecutable(Executable):
def __init__(self, name, jobs, **kwargs):
supports_jobserver = kwargs.pop("supports_jobserver", True)
super(MakeExecutable, self).__init__(name, **kwargs)
super().__init__(name, **kwargs)
self.supports_jobserver = supports_jobserver
self.jobs = jobs
@@ -175,7 +175,7 @@ def __call__(self, *args, **kwargs):
if jobs_env_jobs is not None:
kwargs["extra_env"] = {jobs_env: str(jobs_env_jobs)}
return super(MakeExecutable, self).__call__(*args, **kwargs)
return super().__call__(*args, **kwargs)
def _on_cray():
@@ -1332,7 +1332,7 @@ class ChildError(InstallError):
build_errors = [("spack.util.executable", "ProcessError")]
def __init__(self, msg, module, classname, traceback_string, log_name, log_type, context):
super(ChildError, self).__init__(msg)
super().__init__(msg)
self.module = module
self.name = classname
self.traceback = traceback_string

View File

@@ -312,7 +312,7 @@ def initconfig(self, pkg, spec, prefix):
@property
def std_cmake_args(self):
args = super(CachedCMakeBuilder, self).std_cmake_args
args = super().std_cmake_args
args.extend(["-C", self.cache_path])
return args

View File

@@ -296,8 +296,46 @@ def std_args(pkg, generator=None):
define("CMAKE_PREFIX_PATH", spack.build_environment.get_cmake_prefix_path(pkg)),
]
)
return args
@staticmethod
def define_cuda_architectures(pkg):
"""Returns the str ``-DCMAKE_CUDA_ARCHITECTURES:STRING=(expanded cuda_arch)``.
``cuda_arch`` is variant composed of a list of target CUDA architectures and
it is declared in the cuda package.
This method is no-op for cmake<3.18 and when ``cuda_arch`` variant is not set.
"""
cmake_flag = str()
if "cuda_arch" in pkg.spec.variants and pkg.spec.satisfies("^cmake@3.18:"):
cmake_flag = CMakeBuilder.define(
"CMAKE_CUDA_ARCHITECTURES", pkg.spec.variants["cuda_arch"].value
)
return cmake_flag
@staticmethod
def define_hip_architectures(pkg):
"""Returns the str ``-DCMAKE_HIP_ARCHITECTURES:STRING=(expanded amdgpu_target)``.
``amdgpu_target`` is variant composed of a list of the target HIP
architectures and it is declared in the rocm package.
This method is no-op for cmake<3.18 and when ``amdgpu_target`` variant is
not set.
"""
cmake_flag = str()
if "amdgpu_target" in pkg.spec.variants and pkg.spec.satisfies("^cmake@3.21:"):
cmake_flag = CMakeBuilder.define(
"CMAKE_HIP_ARCHITECTURES", pkg.spec.variants["amdgpu_target"].value
)
return cmake_flag
@staticmethod
def define(cmake_var, value):
"""Return a CMake command line argument that defines a variable.

View File

@@ -175,7 +175,7 @@ def libs(self):
return find_libraries("*", root=lib_path, shared=True, recursive=True)
class IntelOneApiStaticLibraryList(object):
class IntelOneApiStaticLibraryList:
"""Provides ld_flags when static linking is needed
Oneapi puts static and dynamic libraries in the same directory, so

View File

@@ -63,7 +63,7 @@ def create(pkg):
return _BUILDERS[id(pkg)]
class _PhaseAdapter(object):
class _PhaseAdapter:
def __init__(self, builder, phase_fn):
self.builder = builder
self.phase_fn = phase_fn
@@ -115,7 +115,7 @@ class hierarchy (look at AspellDictPackage for an example of that)
# package. The semantic should be the same as the method in the base builder were still
# present in the base class of the package.
class _ForwardToBaseBuilder(object):
class _ForwardToBaseBuilder:
def __init__(self, wrapped_pkg_object, root_builder):
self.wrapped_package_object = wrapped_pkg_object
self.root_builder = root_builder
@@ -188,7 +188,7 @@ def __init__(self, pkg):
# Attribute containing the package wrapped in dispatcher with a `__getattr__`
# method that will forward certain calls to the default builder.
self.pkg_with_dispatcher = _ForwardToBaseBuilder(pkg, root_builder=self)
super(Adapter, self).__init__(pkg)
super().__init__(pkg)
# These two methods don't follow the (self, spec, prefix) signature of phases nor
# the (self) signature of methods, so they are added explicitly to avoid using a
@@ -388,7 +388,7 @@ def __new__(mcs, name, bases, attr_dict):
return super(_PackageAdapterMeta, mcs).__new__(mcs, name, bases, attr_dict)
class InstallationPhase(object):
class InstallationPhase:
"""Manages a single phase of the installation.
This descriptor stores at creation time the name of the method it should
@@ -530,9 +530,9 @@ def setup_build_environment(self, env):
modifications to be applied when the package is built. Package authors
can call methods on it to alter the build environment.
"""
if not hasattr(super(Builder, self), "setup_build_environment"):
if not hasattr(super(), "setup_build_environment"):
return
super(Builder, self).setup_build_environment(env)
super().setup_build_environment(env)
def setup_dependent_build_environment(self, env, dependent_spec):
"""Sets up the build environment of packages that depend on this one.
@@ -563,9 +563,9 @@ def setup_dependent_build_environment(self, env, dependent_spec):
the dependent's state. Note that *this* package's spec is
available as ``self.spec``
"""
if not hasattr(super(Builder, self), "setup_dependent_build_environment"):
if not hasattr(super(), "setup_dependent_build_environment"):
return
super(Builder, self).setup_dependent_build_environment(env, dependent_spec)
super().setup_dependent_build_environment(env, dependent_spec)
def __getitem__(self, idx):
key = self.phases[idx]

View File

@@ -58,7 +58,7 @@ def _fetch_cache():
return spack.fetch_strategy.FsCache(path)
class MirrorCache(object):
class MirrorCache:
def __init__(self, root, skip_unstable_versions):
self.root = os.path.abspath(root)
self.skip_unstable_versions = skip_unstable_versions

View File

@@ -57,7 +57,7 @@
PushResult = namedtuple("PushResult", "success url")
class TemporaryDirectory(object):
class TemporaryDirectory:
def __init__(self):
self.temporary_directory = tempfile.mkdtemp()
@@ -224,7 +224,7 @@ def _print_staging_summary(spec_labels, stages, mirrors_to_check, rebuild_decisi
if not stages:
return
mirrors = spack.mirror.MirrorCollection(mirrors=mirrors_to_check)
mirrors = spack.mirror.MirrorCollection(mirrors=mirrors_to_check, binary=True)
tty.msg("Checked the following mirrors for binaries:")
for m in mirrors.values():
tty.msg(" {0}".format(m.fetch_url))
@@ -471,7 +471,7 @@ def _unpack_script(script_section, op=_noop):
return script
class RebuildDecision(object):
class RebuildDecision:
def __init__(self):
self.rebuild = True
self.mirrors = []
@@ -1257,20 +1257,11 @@ def main_script_replacements(cmd):
output_object["stages"] = stage_names
# Capture the version of spack used to generate the pipeline, transform it
# into a value that can be passed to "git checkout", and save it in a
# global yaml variable
# Capture the version of Spack used to generate the pipeline, that can be
# passed to `git checkout` for version consistency. If we aren't in a Git
# repository, presume we are a Spack release and use the Git tag instead.
spack_version = spack.main.get_version()
version_to_clone = None
v_match = re.match(r"^\d+\.\d+\.\d+$", spack_version)
if v_match:
version_to_clone = "v{0}".format(v_match.group(0))
else:
v_match = re.match(r"^[^-]+-[^-]+-([a-f\d]+)$", spack_version)
if v_match:
version_to_clone = v_match.group(1)
else:
version_to_clone = spack_version
version_to_clone = spack.main.get_spack_commit() or f"v{spack.spack_version}"
output_object["variables"] = {
"SPACK_ARTIFACTS_ROOT": rel_artifacts_root,
@@ -2128,7 +2119,7 @@ def run_standalone_tests(**kwargs):
tty.debug("spack test exited {0}".format(exit_code))
class CDashHandler(object):
class CDashHandler:
"""
Class for managing CDash data and processing.
"""

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import os
import re
@@ -149,7 +147,7 @@ def get_command(cmd_name):
return getattr(get_module(cmd_name), pname)
class _UnquotedFlags(object):
class _UnquotedFlags:
"""Use a heuristic in `.extract()` to detect whether the user is trying to set
multiple flags like the docker ENV attribute allows (e.g. 'cflags=-Os -pipe').
@@ -547,7 +545,7 @@ class PythonNameError(spack.error.SpackError):
def __init__(self, name):
self.name = name
super(PythonNameError, self).__init__("{0} is not a permissible Python name.".format(name))
super().__init__("{0} is not a permissible Python name.".format(name))
class CommandNameError(spack.error.SpackError):
@@ -555,9 +553,7 @@ class CommandNameError(spack.error.SpackError):
def __init__(self, name):
self.name = name
super(CommandNameError, self).__init__(
"{0} is not a permissible Spack command name.".format(name)
)
super().__init__("{0} is not a permissible Spack command name.".format(name))
########################################

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import collections
import archspec.cpu

View File

@@ -59,7 +59,7 @@ def setup_parser(subparser):
subparser.add_argument(
"package_or_file",
help="name of package to show contributions for, " "or path to a file in the spack repo",
help="name of package to show contributions for, or path to a file in the spack repo",
)

View File

@@ -2,8 +2,6 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os.path
import shutil
import tempfile

View File

@@ -43,7 +43,7 @@ def setup_parser(subparser):
subparsers = subparser.add_subparsers(help="buildcache sub-commands")
push = subparsers.add_parser("push", aliases=["create"], help=push_fn.__doc__)
push.add_argument("-f", "--force", action="store_true", help="overwrite tarball if it exists.")
push.add_argument("-f", "--force", action="store_true", help="overwrite tarball if it exists")
push.add_argument(
"-u", "--unsigned", action="store_true", help="push unsigned buildcache tarballs"
)
@@ -53,42 +53,37 @@ def setup_parser(subparser):
action="store_true",
help="allow install root string in binary files after RPATH substitution",
)
push.add_argument(
"-k", "--key", metavar="key", type=str, default=None, help="Key for signing."
)
push.add_argument("mirror", type=str, help="Mirror name, path, or URL.")
push.add_argument("-k", "--key", metavar="key", type=str, default=None, help="key for signing")
push.add_argument("mirror", type=str, help="mirror name, path, or URL")
push.add_argument(
"--update-index",
"--rebuild-index",
action="store_true",
default=False,
help="Regenerate buildcache index after building package(s)",
help="regenerate buildcache index after building package(s)",
)
push.add_argument(
"--spec-file", default=None, help="Create buildcache entry for spec from json or yaml file"
"--spec-file", default=None, help="create buildcache entry for spec from json or yaml file"
)
push.add_argument(
"--only",
default="package,dependencies",
dest="things_to_install",
choices=["package", "dependencies"],
help=(
"Select the buildcache mode. the default is to"
" build a cache for the package along with all"
" its dependencies. Alternatively, one can"
" decide to build a cache for only the package"
" or only the dependencies"
),
help="select the buildcache mode\n\n"
"the default is to build a cache for the package along with all its dependencies. "
"alternatively, one can decide to build a cache for only the package or only the "
"dependencies",
)
arguments.add_common_arguments(push, ["specs"])
push.set_defaults(func=push_fn)
install = subparsers.add_parser("install", help=install_fn.__doc__)
install.add_argument(
"-f", "--force", action="store_true", help="overwrite install directory if it exists."
"-f", "--force", action="store_true", help="overwrite install directory if it exists"
)
install.add_argument(
"-m", "--multiple", action="store_true", help="allow all matching packages "
"-m", "--multiple", action="store_true", help="allow all matching packages"
)
install.add_argument(
"-u",
@@ -142,11 +137,11 @@ def setup_parser(subparser):
"-m",
"--mirror-url",
default=None,
help="Override any configured mirrors with this mirror URL",
help="override any configured mirrors with this mirror URL",
)
check.add_argument(
"-o", "--output-file", default=None, help="File where rebuild info should be written"
"-o", "--output-file", default=None, help="file where rebuild info should be written"
)
# used to construct scope arguments below
@@ -162,13 +157,13 @@ def setup_parser(subparser):
)
check.add_argument(
"-s", "--spec", default=None, help="Check single spec instead of release specs file"
"-s", "--spec", default=None, help="check single spec instead of release specs file"
)
check.add_argument(
"--spec-file",
default=None,
help=("Check single spec from json or yaml file instead of release specs file"),
help="check single spec from json or yaml file instead of release specs file",
)
check.set_defaults(func=check_fn)
@@ -176,15 +171,15 @@ def setup_parser(subparser):
# Download tarball and specfile
download = subparsers.add_parser("download", help=download_fn.__doc__)
download.add_argument(
"-s", "--spec", default=None, help="Download built tarball for spec from mirror"
"-s", "--spec", default=None, help="download built tarball for spec from mirror"
)
download.add_argument(
"--spec-file",
default=None,
help=("Download built tarball for spec (from json or yaml file) from mirror"),
help="download built tarball for spec (from json or yaml file) from mirror",
)
download.add_argument(
"-p", "--path", default=None, help="Path to directory where tarball should be downloaded"
"-p", "--path", default=None, help="path to directory where tarball should be downloaded"
)
download.set_defaults(func=download_fn)
@@ -193,52 +188,52 @@ def setup_parser(subparser):
"get-buildcache-name", help=get_buildcache_name_fn.__doc__
)
getbuildcachename.add_argument(
"-s", "--spec", default=None, help="Spec string for which buildcache name is desired"
"-s", "--spec", default=None, help="spec string for which buildcache name is desired"
)
getbuildcachename.add_argument(
"--spec-file",
default=None,
help=("Path to spec json or yaml file for which buildcache name is desired"),
help="path to spec json or yaml file for which buildcache name is desired",
)
getbuildcachename.set_defaults(func=get_buildcache_name_fn)
# Given the root spec, save the yaml of the dependent spec to a file
savespecfile = subparsers.add_parser("save-specfile", help=save_specfile_fn.__doc__)
savespecfile.add_argument("--root-spec", default=None, help="Root spec of dependent spec")
savespecfile.add_argument("--root-spec", default=None, help="root spec of dependent spec")
savespecfile.add_argument(
"--root-specfile",
default=None,
help="Path to json or yaml file containing root spec of dependent spec",
help="path to json or yaml file containing root spec of dependent spec",
)
savespecfile.add_argument(
"-s",
"--specs",
default=None,
help="List of dependent specs for which saved yaml is desired",
help="list of dependent specs for which saved yaml is desired",
)
savespecfile.add_argument(
"--specfile-dir", default=None, help="Path to directory where spec yamls should be saved"
"--specfile-dir", default=None, help="path to directory where spec yamls should be saved"
)
savespecfile.set_defaults(func=save_specfile_fn)
# Sync buildcache entries from one mirror to another
sync = subparsers.add_parser("sync", help=sync_fn.__doc__)
sync.add_argument(
"--manifest-glob", help="A quoted glob pattern identifying copy manifest files"
"--manifest-glob", help="a quoted glob pattern identifying copy manifest files"
)
sync.add_argument(
"src_mirror",
metavar="source mirror",
type=arguments.mirror_name_or_url,
nargs="?",
help="Source mirror name, path, or URL",
help="source mirror name, path, or URL",
)
sync.add_argument(
"dest_mirror",
metavar="destination mirror",
type=arguments.mirror_name_or_url,
nargs="?",
help="Destination mirror name, path, or URL",
help="destination mirror name, path, or URL",
)
sync.set_defaults(func=sync_fn)
@@ -247,14 +242,14 @@ def setup_parser(subparser):
"update-index", aliases=["rebuild-index"], help=update_index_fn.__doc__
)
update_index.add_argument(
"mirror", type=arguments.mirror_name_or_url, help="Destination mirror name, path, or URL"
"mirror", type=arguments.mirror_name_or_url, help="destination mirror name, path, or URL"
)
update_index.add_argument(
"-k",
"--keys",
default=False,
action="store_true",
help="If provided, key index will be updated as well as package index",
help="if provided, key index will be updated as well as package index",
)
update_index.set_defaults(func=update_index_fn)
@@ -411,9 +406,7 @@ def keys_fn(args):
def preview_fn(args):
"""analyze an installed spec and reports whether executables
and libraries are relocatable
"""
"""analyze an installed spec and reports whether executables and libraries are relocatable"""
constraints = spack.cmd.parse_specs(args.specs)
specs = spack.store.find(constraints, multiple=True)
@@ -425,11 +418,11 @@ def preview_fn(args):
def check_fn(args):
"""Check specs (either a single spec from --spec, or else the full set
of release specs) against remote binary mirror(s) to see if any need
to be rebuilt. This command uses the process exit code to indicate
its result, specifically, if the exit code is non-zero, then at least
one of the indicated specs needs to be rebuilt.
"""check specs against remote binary mirror(s) to see if any need to be rebuilt
either a single spec from --spec, or else the full set of release specs. this command uses the
process exit code to indicate its result, specifically, if the exit code is non-zero, then at
least one of the indicated specs needs to be rebuilt
"""
if args.spec or args.spec_file:
specs = [_concrete_spec_from_args(args)]
@@ -460,10 +453,12 @@ def check_fn(args):
def download_fn(args):
"""Download buildcache entry from a remote mirror to local folder. This
command uses the process exit code to indicate its result, specifically,
a non-zero exit code indicates that the command failed to download at
least one of the required buildcache components."""
"""download buildcache entry from a remote mirror to local folder
this command uses the process exit code to indicate its result, specifically, a non-zero exit
code indicates that the command failed to download at least one of the required buildcache
components
"""
if not args.spec and not args.spec_file:
tty.msg("No specs provided, exiting.")
return
@@ -480,19 +475,18 @@ def download_fn(args):
def get_buildcache_name_fn(args):
"""Get name (prefix) of buildcache entries for this spec"""
"""get name (prefix) of buildcache entries for this spec"""
spec = _concrete_spec_from_args(args)
buildcache_name = bindist.tarball_name(spec, "")
print("{0}".format(buildcache_name))
def save_specfile_fn(args):
"""Get full spec for dependencies, relative to root spec, and write them
to files in the specified output directory. Uses exit code to signal
success or failure. An exit code of zero means the command was likely
successful. If any errors or exceptions are encountered, or if expected
command-line arguments are not provided, then the exit code will be
non-zero.
"""get full spec for dependencies and write them to files in the specified output directory
uses exit code to signal success or failure. an exit code of zero means the command was likely
successful. if any errors or exceptions are encountered, or if expected command-line arguments
are not provided, then the exit code will be non-zero
"""
if not args.root_spec and not args.root_specfile:
tty.msg("No root spec provided, exiting.")
@@ -546,12 +540,9 @@ def copy_buildcache_file(src_url, dest_url, local_path=None):
def sync_fn(args):
"""Syncs binaries (and associated metadata) from one mirror to another.
Requires an active environment in order to know which specs to sync.
"""sync binaries (and associated metadata) from one mirror to another
Args:
src (str): Source mirror URL
dest (str): Destination mirror URL
requires an active environment in order to know which specs to sync
"""
if args.manifest_glob:
manifest_copy(glob.glob(args.manifest_glob))
@@ -639,7 +630,7 @@ def update_index(mirror: spack.mirror.Mirror, update_keys=False):
def update_index_fn(args):
"""Update a buildcache index."""
"""update a buildcache index"""
update_index(args.mirror, update_keys=args.keys)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import sys

View File

@@ -47,40 +47,36 @@ def setup_parser(subparser):
generate.add_argument(
"--output-file",
default=None,
help="""pathname for the generated gitlab ci yaml file
Path to the file where generated jobs file should
be written. Default is .gitlab-ci.yml in the root of
the repository.""",
help="pathname for the generated gitlab ci yaml file\n\n"
"path to the file where generated jobs file should be written. "
"default is .gitlab-ci.yml in the root of the repository",
)
generate.add_argument(
"--copy-to",
default=None,
help="""path to additional directory for job files
This option provides an absolute path to a directory
where the generated jobs yaml file should be copied.
Default is not to copy.""",
help="path to additional directory for job files\n\n"
"this option provides an absolute path to a directory where the generated "
"jobs yaml file should be copied. default is not to copy",
)
generate.add_argument(
"--optimize",
action="store_true",
default=False,
help="""(Experimental) optimize the gitlab yaml file for size
Run the generated document through a series of
optimization passes designed to reduce the size
of the generated file.""",
help="(experimental) optimize the gitlab yaml file for size\n\n"
"run the generated document through a series of optimization passes "
"designed to reduce the size of the generated file",
)
generate.add_argument(
"--dependencies",
action="store_true",
default=False,
help="(Experimental) disable DAG scheduling; use " ' "plain" dependencies.',
help="(experimental) disable DAG scheduling (use 'plain' dependencies)",
)
generate.add_argument(
"--buildcache-destination",
default=None,
help="Override the mirror configured in the environment (spack.yaml) "
+ "in order to push binaries from the generated pipeline to a "
+ "different location.",
help="override the mirror configured in the environment\n\n"
"allows for pushing binaries from the generated pipeline to a different location",
)
prune_group = generate.add_mutually_exclusive_group()
prune_group.add_argument(
@@ -88,45 +84,37 @@ def setup_parser(subparser):
action="store_true",
dest="prune_dag",
default=True,
help="""skip up-to-date specs
Do not generate jobs for specs that are up-to-date
on the mirror.""",
help="skip up-to-date specs\n\n"
"do not generate jobs for specs that are up-to-date on the mirror",
)
prune_group.add_argument(
"--no-prune-dag",
action="store_false",
dest="prune_dag",
default=True,
help="""process up-to-date specs
Generate jobs for specs even when they are up-to-date
on the mirror.""",
help="process up-to-date specs\n\n"
"generate jobs for specs even when they are up-to-date on the mirror",
)
generate.add_argument(
"--check-index-only",
action="store_true",
dest="index_only",
default=False,
help="""only check spec state from buildcache indices
Spack always checks specs against configured binary
mirrors, regardless of the DAG pruning option.
If enabled, Spack will assume all remote buildcache
indices are up-to-date when assessing whether the spec
on the mirror, if present, is up-to-date. This has the
benefit of reducing pipeline generation time but at the
potential cost of needlessly rebuilding specs when the
indices are outdated.
If not enabled, Spack will fetch remote spec files
directly to assess whether the spec on the mirror is
up-to-date.""",
help="only check spec state from buildcache indices\n\n"
"Spack always checks specs against configured binary mirrors, regardless of the DAG "
"pruning option. if enabled, Spack will assume all remote buildcache indices are "
"up-to-date when assessing whether the spec on the mirror, if present, is up-to-date. "
"this has the benefit of reducing pipeline generation time but at the potential cost of "
"needlessly rebuilding specs when the indices are outdated. if not enabled, Spack will "
"fetch remote spec files directly to assess whether the spec on the mirror is up-to-date",
)
generate.add_argument(
"--artifacts-root",
default=None,
help="""path to the root of the artifacts directory
If provided, concrete environment files (spack.yaml,
spack.lock) will be generated under this directory.
Their location will be passed to generated child jobs
through the SPACK_CONCRETE_ENVIRONMENT_PATH variable.""",
help="path to the root of the artifacts directory\n\n"
"if provided, concrete environment files (spack.yaml, spack.lock) will be generated under "
"this directory. their location will be passed to generated child jobs through the "
"SPACK_CONCRETE_ENVIRONMENT_PATH variable",
)
generate.set_defaults(func=ci_generate)
@@ -150,13 +138,13 @@ def setup_parser(subparser):
"--tests",
action="store_true",
default=False,
help="""run stand-alone tests after the build""",
help="run stand-alone tests after the build",
)
rebuild.add_argument(
"--fail-fast",
action="store_true",
default=False,
help="""stop stand-alone tests after the first failure""",
help="stop stand-alone tests after the first failure",
)
rebuild.set_defaults(func=ci_rebuild)
@@ -166,10 +154,10 @@ def setup_parser(subparser):
description=deindent(ci_reproduce.__doc__),
help=spack.cmd.first_line(ci_reproduce.__doc__),
)
reproduce.add_argument("job_url", help="Url of job artifacts bundle")
reproduce.add_argument("job_url", help="URL of job artifacts bundle")
reproduce.add_argument(
"--working-dir",
help="Where to unpack artifacts",
help="where to unpack artifacts",
default=os.path.join(os.getcwd(), "ci_reproduction"),
)
@@ -177,12 +165,12 @@ def setup_parser(subparser):
def ci_generate(args):
"""Generate jobs file from a CI-aware spack file.
"""generate jobs file from a CI-aware spack file
If you want to report the results on CDash, you will need to set
the SPACK_CDASH_AUTH_TOKEN before invoking this command. The
value must be the CDash authorization token needed to create a
build group and register all generated jobs under it."""
if you want to report the results on CDash, you will need to set the SPACK_CDASH_AUTH_TOKEN
before invoking this command. the value must be the CDash authorization token needed to create
a build group and register all generated jobs under it
"""
env = spack.cmd.require_active_env(cmd_name="ci generate")
output_file = args.output_file
@@ -223,10 +211,11 @@ def ci_generate(args):
def ci_reindex(args):
"""Rebuild the buildcache index for the remote mirror.
"""rebuild the buildcache index for the remote mirror
Use the active, gitlab-enabled environment to rebuild the buildcache
index for the associated mirror."""
use the active, gitlab-enabled environment to rebuild the buildcache index for the associated
mirror
"""
env = spack.cmd.require_active_env(cmd_name="ci rebuild-index")
yaml_root = env.manifest[ev.TOP_LEVEL_KEY]
@@ -242,10 +231,11 @@ def ci_reindex(args):
def ci_rebuild(args):
"""Rebuild a spec if it is not on the remote mirror.
"""rebuild a spec if it is not on the remote mirror
Check a single spec against the remote mirror, and rebuild it from
source if the mirror does not contain the hash."""
check a single spec against the remote mirror, and rebuild it from source if the mirror does
not contain the hash
"""
env = spack.cmd.require_active_env(cmd_name="ci rebuild")
# Make sure the environment is "gitlab-enabled", or else there's nothing
@@ -606,7 +596,7 @@ def ci_rebuild(args):
)
reports_dir = fs.join_path(os.getcwd(), "cdash_report")
if args.tests and broken_tests:
tty.warn("Unable to run stand-alone tests since listed in " "ci's 'broken-tests-packages'")
tty.warn("Unable to run stand-alone tests since listed in ci's 'broken-tests-packages'")
if cdash_handler:
msg = "Package is listed in ci's broken-tests-packages"
cdash_handler.report_skipped(job_spec, reports_dir, reason=msg)
@@ -649,7 +639,7 @@ def ci_rebuild(args):
tty.warn("No recognized test results reporting option")
else:
tty.warn("Unable to run stand-alone tests due to unsuccessful " "installation")
tty.warn("Unable to run stand-alone tests due to unsuccessful installation")
if cdash_handler:
msg = "Failed to install the package"
cdash_handler.report_skipped(job_spec, reports_dir, reason=msg)
@@ -728,10 +718,11 @@ def ci_rebuild(args):
def ci_reproduce(args):
"""Generate instructions for reproducing the spec rebuild job.
"""generate instructions for reproducing the spec rebuild job
Artifacts of the provided gitlab pipeline rebuild job's URL will be
used to derive instructions for reproducing the build locally."""
artifacts of the provided gitlab pipeline rebuild job's URL will be used to derive
instructions for reproducing the build locally
"""
job_url = args.job_url
work_dir = args.working_dir

View File

@@ -48,7 +48,7 @@ def get_origin_info(remote):
)
except ProcessError:
origin_url = _SPACK_UPSTREAM
tty.warn("No git repository found; " "using default upstream URL: %s" % origin_url)
tty.warn("No git repository found; using default upstream URL: %s" % origin_url)
return (origin_url.strip(), branch.strip())
@@ -69,7 +69,7 @@ def clone(parser, args):
files_in_the_way = os.listdir(prefix)
if files_in_the_way:
tty.die(
"There are already files there! " "Delete these files before boostrapping spack.",
"There are already files there! Delete these files before boostrapping spack.",
*files_in_the_way,
)

View File

@@ -3,17 +3,22 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import copy
import os
import re
import sys
from argparse import ArgumentParser, Namespace
from typing import IO, Any, Callable, Dict, Sequence, Set
import llnl.util.filesystem as fs
import llnl.util.tty as tty
from llnl.util.argparsewriter import ArgparseCompletionWriter, ArgparseRstWriter, ArgparseWriter
from llnl.util.argparsewriter import (
ArgparseCompletionWriter,
ArgparseRstWriter,
ArgparseWriter,
Command,
)
from llnl.util.tty.colify import colify
import spack.cmd
@@ -27,12 +32,12 @@
#: list of command formatters
formatters = {}
formatters: Dict[str, Callable[[Namespace, IO], None]] = {}
#: standard arguments for updating completion scripts
#: we iterate through these when called with --update-completion
update_completion_args = {
update_completion_args: Dict[str, Dict[str, Any]] = {
"bash": {
"aliases": True,
"format": "bash",
@@ -42,13 +47,25 @@
}
def formatter(func):
"""Decorator used to register formatters"""
def formatter(func: Callable[[Namespace, IO], None]) -> Callable[[Namespace, IO], None]:
"""Decorator used to register formatters.
Args:
func: Formatting function.
Returns:
The same function.
"""
formatters[func.__name__] = func
return func
def setup_parser(subparser):
def setup_parser(subparser: ArgumentParser) -> None:
"""Set up the argument parser.
Args:
subparser: Preliminary argument parser.
"""
subparser.add_argument(
"--update-completion",
action="store_true",
@@ -91,18 +108,34 @@ class SpackArgparseRstWriter(ArgparseRstWriter):
def __init__(
self,
prog,
out=None,
aliases=False,
documented_commands=[],
rst_levels=["-", "-", "^", "~", ":", "`"],
prog: str,
out: IO = sys.stdout,
aliases: bool = False,
documented_commands: Set[str] = set(),
rst_levels: Sequence[str] = ["-", "-", "^", "~", ":", "`"],
):
out = sys.stdout if out is None else out
super(SpackArgparseRstWriter, self).__init__(prog, out, aliases, rst_levels)
"""Initialize a new SpackArgparseRstWriter instance.
Args:
prog: Program name.
out: File object to write to.
aliases: Whether or not to include subparsers for aliases.
documented_commands: Set of commands with additional documentation.
rst_levels: List of characters for rst section headings.
"""
super().__init__(prog, out, aliases, rst_levels)
self.documented = documented_commands
def usage(self, *args):
string = super(SpackArgparseRstWriter, self).usage(*args)
def usage(self, usage: str) -> str:
"""Example usage of a command.
Args:
usage: Command usage.
Returns:
Usage of a command.
"""
string = super().usage(usage)
cmd = self.parser.prog.replace(" ", "-")
if cmd in self.documented:
@@ -112,11 +145,21 @@ def usage(self, *args):
class SubcommandWriter(ArgparseWriter):
def format(self, cmd):
"""Write argparse output as a list of subcommands."""
def format(self, cmd: Command) -> str:
"""Return the string representation of a single node in the parser tree.
Args:
cmd: Parsed information about a command or subcommand.
Returns:
String representation of this subcommand.
"""
return " " * self.level + cmd.prog + "\n"
_positional_to_subroutine = {
_positional_to_subroutine: Dict[str, str] = {
"package": "_all_packages",
"spec": "_all_packages",
"filter": "_all_packages",
@@ -138,7 +181,19 @@ def format(self, cmd):
class BashCompletionWriter(ArgparseCompletionWriter):
"""Write argparse output as bash programmable tab completion."""
def body(self, positionals, optionals, subcommands):
def body(
self, positionals: Sequence[str], optionals: Sequence[str], subcommands: Sequence[str]
) -> str:
"""Return the body of the function.
Args:
positionals: List of positional arguments.
optionals: List of optional arguments.
subcommands: List of subcommand parsers.
Returns:
Function body.
"""
if positionals:
return """
if $list_options
@@ -168,7 +223,15 @@ def body(self, positionals, optionals, subcommands):
self.optionals(optionals)
)
def positionals(self, positionals):
def positionals(self, positionals: Sequence[str]) -> str:
"""Return the syntax for reporting positional arguments.
Args:
positionals: List of positional arguments.
Returns:
Syntax for positional arguments.
"""
# If match found, return function name
for positional in positionals:
for key, value in _positional_to_subroutine.items():
@@ -178,22 +241,49 @@ def positionals(self, positionals):
# If no matches found, return empty list
return 'SPACK_COMPREPLY=""'
def optionals(self, optionals):
def optionals(self, optionals: Sequence[str]) -> str:
"""Return the syntax for reporting optional flags.
Args:
optionals: List of optional arguments.
Returns:
Syntax for optional flags.
"""
return 'SPACK_COMPREPLY="{0}"'.format(" ".join(optionals))
def subcommands(self, subcommands):
def subcommands(self, subcommands: Sequence[str]) -> str:
"""Return the syntax for reporting subcommands.
Args:
subcommands: List of subcommand parsers.
Returns:
Syntax for subcommand parsers
"""
return 'SPACK_COMPREPLY="{0}"'.format(" ".join(subcommands))
@formatter
def subcommands(args, out):
def subcommands(args: Namespace, out: IO) -> None:
"""Hierarchical tree of subcommands.
args:
args: Command-line arguments.
out: File object to write to.
"""
parser = spack.main.make_argument_parser()
spack.main.add_all_commands(parser)
writer = SubcommandWriter(parser.prog, out, args.aliases)
writer.write(parser)
def rst_index(out):
def rst_index(out: IO) -> None:
"""Generate an index of all commands.
Args:
out: File object to write to.
"""
out.write("\n")
index = spack.main.index_commands()
@@ -221,13 +311,19 @@ def rst_index(out):
@formatter
def rst(args, out):
def rst(args: Namespace, out: IO) -> None:
"""ReStructuredText documentation of subcommands.
args:
args: Command-line arguments.
out: File object to write to.
"""
# create a parser with all commands
parser = spack.main.make_argument_parser()
spack.main.add_all_commands(parser)
# extract cross-refs of the form `_cmd-spack-<cmd>:` from rst files
documented_commands = set()
documented_commands: Set[str] = set()
for filename in args.rst_files:
with open(filename) as f:
for line in f:
@@ -245,7 +341,13 @@ def rst(args, out):
@formatter
def names(args, out):
def names(args: Namespace, out: IO) -> None:
"""Simple list of top-level commands.
args:
args: Command-line arguments.
out: File object to write to.
"""
commands = copy.copy(spack.cmd.all_commands())
if args.aliases:
@@ -255,7 +357,13 @@ def names(args, out):
@formatter
def bash(args, out):
def bash(args: Namespace, out: IO) -> None:
"""Bash tab-completion script.
args:
args: Command-line arguments.
out: File object to write to.
"""
parser = spack.main.make_argument_parser()
spack.main.add_all_commands(parser)
@@ -263,7 +371,13 @@ def bash(args, out):
writer.write(parser)
def prepend_header(args, out):
def prepend_header(args: Namespace, out: IO) -> None:
"""Prepend header text at the beginning of a file.
Args:
args: Command-line arguments.
out: File object to write to.
"""
if not args.header:
return
@@ -271,10 +385,14 @@ def prepend_header(args, out):
out.write(header.read())
def _commands(parser, args):
def _commands(parser: ArgumentParser, args: Namespace) -> None:
"""This is the 'regular' command, which can be called multiple times.
See ``commands()`` below for ``--update-completion`` handling.
Args:
parser: Argument parser.
args: Command-line arguments.
"""
formatter = formatters[args.format]
@@ -296,12 +414,15 @@ def _commands(parser, args):
formatter(args, sys.stdout)
def update_completion(parser, args):
def update_completion(parser: ArgumentParser, args: Namespace) -> None:
"""Iterate through the shells and update the standard completion files.
This is a convenience method to avoid calling this command many
times, and to simplify completion update for developers.
Args:
parser: Argument parser.
args: Command-line arguments.
"""
for shell, shell_args in update_completion_args.items():
for attr, value in shell_args.items():
@@ -309,14 +430,20 @@ def update_completion(parser, args):
_commands(parser, args)
def commands(parser, args):
def commands(parser: ArgumentParser, args: Namespace) -> None:
"""Main function that calls formatter functions.
Args:
parser: Argument parser.
args: Command-line arguments.
"""
if args.update_completion:
if args.format != "names" or any([args.aliases, args.update, args.header]):
tty.die("--update-completion can only be specified alone.")
# this runs the command multiple times with different arguments
return update_completion(parser, args)
update_completion(parser, args)
else:
# run commands normally
return _commands(parser, args)
_commands(parser, args)

View File

@@ -265,7 +265,7 @@ def recurse_dependents():
"--dependents",
action="store_true",
dest="dependents",
help="also uninstall any packages that depend on the ones given " "via command line",
help="also uninstall any packages that depend on the ones given via command line",
)
@@ -286,7 +286,7 @@ def deptype():
"--deptype",
action=DeptypeAction,
default=dep.all_deptypes,
help="comma-separated list of deptypes to traverse\ndefault=%s"
help="comma-separated list of deptypes to traverse\n\ndefault=%s"
% ",".join(dep.all_deptypes),
)
@@ -350,9 +350,9 @@ def install_status():
"--install-status",
action="store_true",
default=True,
help="show install status of packages. packages can be: "
help="show install status of packages\n\npackages can be: "
"installed [+], missing and needed by an installed package [-], "
"installed in and upstream instance [^], "
"installed in an upstream instance [^], "
"or not installed (no annotation)",
)
@@ -393,24 +393,23 @@ def add_cdash_args(subparser, add_help):
cdash_help = {}
if add_help:
cdash_help["upload-url"] = "CDash URL where reports will be uploaded"
cdash_help[
"build"
] = """The name of the build that will be reported to CDash.
Defaults to spec of the package to operate on."""
cdash_help[
"site"
] = """The site name that will be reported to CDash.
Defaults to current system hostname."""
cdash_help[
"track"
] = """Results will be reported to this group on CDash.
Defaults to Experimental."""
cdash_help[
"buildstamp"
] = """Instead of letting the CDash reporter prepare the
buildstamp which, when combined with build name, site and project,
uniquely identifies the build, provide this argument to identify
the build yourself. Format: %%Y%%m%%d-%%H%%M-[cdash-track]"""
cdash_help["build"] = (
"name of the build that will be reported to CDash\n\n"
"defaults to spec of the package to operate on"
)
cdash_help["site"] = (
"site name that will be reported to CDash\n\n" "defaults to current system hostname"
)
cdash_help["track"] = (
"results will be reported to this group on CDash\n\n" "defaults to Experimental"
)
cdash_help["buildstamp"] = (
"use custom buildstamp\n\n"
"instead of letting the CDash reporter prepare the "
"buildstamp which, when combined with build name, site and project, "
"uniquely identifies the build, provide this argument to identify "
"the build yourself. format: %%Y%%m%%d-%%H%%M-[cdash-track]"
)
else:
cdash_help["upload-url"] = argparse.SUPPRESS
cdash_help["build"] = argparse.SUPPRESS
@@ -479,7 +478,7 @@ def __init__(
# substituting '_' for ':'.
dest = dest.replace(":", "_")
super(ConfigSetAction, self).__init__(
super().__init__(
option_strings=option_strings,
dest=dest,
nargs=0,
@@ -542,16 +541,16 @@ def add_s3_connection_args(subparser, add_help):
"--s3-access-key-id", help="ID string to use to connect to this S3 mirror"
)
subparser.add_argument(
"--s3-access-key-secret", help="Secret string to use to connect to this S3 mirror"
"--s3-access-key-secret", help="secret string to use to connect to this S3 mirror"
)
subparser.add_argument(
"--s3-access-token", help="Access Token to use to connect to this S3 mirror"
"--s3-access-token", help="access token to use to connect to this S3 mirror"
)
subparser.add_argument(
"--s3-profile", help="S3 profile name to use to connect to this S3 mirror", default=None
)
subparser.add_argument(
"--s3-endpoint-url", help="Endpoint URL to use to connect to this S3 mirror"
"--s3-endpoint-url", help="endpoint URL to use to connect to this S3 mirror"
)

View File

@@ -2,8 +2,6 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import os

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import sys

View File

@@ -14,18 +14,16 @@
def setup_parser(subparser):
subparser.add_argument(
"-f", "--force", action="store_true", help="Re-concretize even if already concretized."
"-f", "--force", action="store_true", help="re-concretize even if already concretized"
)
subparser.add_argument(
"--test",
default=None,
choices=["root", "all"],
help="""Concretize with test dependencies. When 'root' is chosen, test
dependencies are only added for the environment's root specs. When 'all' is
chosen, test dependencies are enabled for all packages in the environment.""",
help="concretize with test dependencies of only root packages or all packages",
)
subparser.add_argument(
"-q", "--quiet", action="store_true", help="Don't print concretized specs"
"-q", "--quiet", action="store_true", help="don't print concretized specs"
)
spack.cmd.common.arguments.add_concretizer_args(subparser)

View File

@@ -2,8 +2,6 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import collections
import os
import shutil
@@ -44,7 +42,7 @@ def setup_parser(subparser):
get_parser = sp.add_parser("get", help="print configuration values")
get_parser.add_argument(
"section",
help="configuration section to print. " "options: %(choices)s",
help="configuration section to print\n\noptions: %(choices)s",
nargs="?",
metavar="section",
choices=spack.config.section_schemas,
@@ -55,7 +53,7 @@ def setup_parser(subparser):
)
blame_parser.add_argument(
"section",
help="configuration section to print. " "options: %(choices)s",
help="configuration section to print\n\noptions: %(choices)s",
metavar="section",
choices=spack.config.section_schemas,
)
@@ -63,7 +61,7 @@ def setup_parser(subparser):
edit_parser = sp.add_parser("edit", help="edit configuration file")
edit_parser.add_argument(
"section",
help="configuration section to edit. " "options: %(choices)s",
help="configuration section to edit\n\noptions: %(choices)s",
metavar="section",
nargs="?",
choices=spack.config.section_schemas,
@@ -78,7 +76,7 @@ def setup_parser(subparser):
add_parser.add_argument(
"path",
nargs="?",
help="colon-separated path to config that should be added," " e.g. 'config:default:true'",
help="colon-separated path to config that should be added, e.g. 'config:default:true'",
)
add_parser.add_argument("-f", "--file", help="file from which to set all config values")
@@ -90,7 +88,7 @@ def setup_parser(subparser):
"--local",
action="store_true",
default=False,
help="Set packages preferences based on local installs, rather " "than upstream.",
help="set packages preferences based on local installs, rather than upstream",
)
remove_parser = sp.add_parser("remove", aliases=["rm"], help="remove configuration parameters")
@@ -159,7 +157,7 @@ def config_get(args):
tty.die("environment has no %s file" % ev.manifest_name)
else:
tty.die("`spack config get` requires a section argument " "or an active environment.")
tty.die("`spack config get` requires a section argument or an active environment.")
def config_blame(args):
@@ -182,7 +180,7 @@ def config_edit(args):
# If we aren't editing a spack.yaml file, get config path from scope.
scope, section = _get_scope_and_section(args)
if not scope and not section:
tty.die("`spack config edit` requires a section argument " "or an active environment.")
tty.die("`spack config edit` requires a section argument or an active environment.")
config_file = spack.config.config.get_config_filename(scope, section)
if args.print_file:
@@ -376,7 +374,7 @@ def config_revert(args):
proceed = True
if not args.yes_to_all:
msg = "The following scopes will be restored from the corresponding" " backup files:\n"
msg = "The following scopes will be restored from the corresponding backup files:\n"
for entry in to_be_restored:
msg += "\t[scope={0.scope}, bkp={0.bkp}]\n".format(entry)
msg += "This operation cannot be undone."

View File

@@ -10,7 +10,7 @@
import spack.container
import spack.container.images
description = "creates recipes to build images for different" " container runtimes"
description = "creates recipes to build images for different container runtimes"
section = "container"
level = "long"

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import re
import urllib.parse
@@ -71,7 +69,7 @@ class {class_name}({base_class_name}):
'''
class BundlePackageTemplate(object):
class BundlePackageTemplate:
"""
Provides the default values to be used for a bundle package file template.
"""
@@ -122,7 +120,7 @@ def install(self, spec, prefix):
url_line = ' url = "{url}"'
def __init__(self, name, url, versions):
super(PackageTemplate, self).__init__(name, versions)
super().__init__(name, versions)
self.url_def = self.url_line.format(url=url)
@@ -200,7 +198,7 @@ def __init__(self, name, url, *args, **kwargs):
# Make it more obvious that we are renaming the package
tty.msg("Changing package name from {0} to lua-{0}".format(name))
name = "lua-{0}".format(name)
super(LuaPackageTemplate, self).__init__(name, url, *args, **kwargs)
super().__init__(name, url, *args, **kwargs)
class MesonPackageTemplate(PackageTemplate):
@@ -308,7 +306,7 @@ def __init__(self, name, url, *args, **kwargs):
tty.msg("Changing package name from {0} to rkt-{0}".format(name))
name = "rkt-{0}".format(name)
self.body_def = self.body_def.format(name[4:])
super(RacketPackageTemplate, self).__init__(name, url, *args, **kwargs)
super().__init__(name, url, *args, **kwargs)
class PythonPackageTemplate(PackageTemplate):
@@ -400,7 +398,7 @@ def __init__(self, name, url, *args, **kwargs):
+ self.url_line
)
super(PythonPackageTemplate, self).__init__(name, url, *args, **kwargs)
super().__init__(name, url, *args, **kwargs)
class RPackageTemplate(PackageTemplate):
@@ -439,7 +437,7 @@ def __init__(self, name, url, *args, **kwargs):
if bioc:
self.url_line = ' url = "{0}"\n' ' bioc = "{1}"'.format(url, r_name)
super(RPackageTemplate, self).__init__(name, url, *args, **kwargs)
super().__init__(name, url, *args, **kwargs)
class PerlmakePackageTemplate(PackageTemplate):
@@ -466,7 +464,7 @@ def __init__(self, name, *args, **kwargs):
tty.msg("Changing package name from {0} to perl-{0}".format(name))
name = "perl-{0}".format(name)
super(PerlmakePackageTemplate, self).__init__(name, *args, **kwargs)
super().__init__(name, *args, **kwargs)
class PerlbuildPackageTemplate(PerlmakePackageTemplate):
@@ -499,7 +497,7 @@ def __init__(self, name, *args, **kwargs):
tty.msg("Changing package name from {0} to octave-{0}".format(name))
name = "octave-{0}".format(name)
super(OctavePackageTemplate, self).__init__(name, *args, **kwargs)
super().__init__(name, *args, **kwargs)
class RubyPackageTemplate(PackageTemplate):
@@ -527,7 +525,7 @@ def __init__(self, name, *args, **kwargs):
tty.msg("Changing package name from {0} to ruby-{0}".format(name))
name = "ruby-{0}".format(name)
super(RubyPackageTemplate, self).__init__(name, *args, **kwargs)
super().__init__(name, *args, **kwargs)
class MakefilePackageTemplate(PackageTemplate):
@@ -572,7 +570,7 @@ def __init__(self, name, *args, **kwargs):
tty.msg("Changing package name from {0} to py-{0}".format(name))
name = "py-{0}".format(name)
super(SIPPackageTemplate, self).__init__(name, *args, **kwargs)
super().__init__(name, *args, **kwargs)
templates = {
@@ -614,7 +612,7 @@ def setup_parser(subparser):
"--template",
metavar="TEMPLATE",
choices=sorted(templates.keys()),
help="build system template to use. options: %(choices)s",
help="build system template to use\n\noptions: %(choices)s",
)
subparser.add_argument(
"-r", "--repo", help="path to a repository where the package should be created"
@@ -622,7 +620,7 @@ def setup_parser(subparser):
subparser.add_argument(
"-N",
"--namespace",
help="specify a namespace for the package. must be the namespace of "
help="specify a namespace for the package\n\nmust be the namespace of "
"a repository registered with Spack",
)
subparser.add_argument(
@@ -880,7 +878,7 @@ def get_build_system(template, url, guesser):
# Use whatever build system the guesser detected
selected_template = guesser.build_system
if selected_template == "generic":
tty.warn("Unable to detect a build system. " "Using a generic package template.")
tty.warn("Unable to detect a build system. Using a generic package template.")
else:
msg = "This package looks like it uses the {0} build system"
tty.msg(msg.format(selected_template))

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import platform
import re

View File

@@ -26,8 +26,8 @@ def setup_parser(subparser):
"--installed",
action="store_true",
default=False,
help="List installed dependencies of an installed spec, "
"instead of possible dependencies of a package.",
help="list installed dependencies of an installed spec "
"instead of possible dependencies of a package",
)
subparser.add_argument(
"-t",

View File

@@ -25,15 +25,15 @@ def setup_parser(subparser):
"--installed",
action="store_true",
default=False,
help="List installed dependents of an installed spec, "
"instead of possible dependents of a package.",
help="list installed dependents of an installed spec "
"instead of possible dependents of a package",
)
subparser.add_argument(
"-t",
"--transitive",
action="store_true",
default=False,
help="Show all transitive dependents.",
help="show all transitive dependents",
)
arguments.add_common_arguments(subparser, ["spec"])

View File

@@ -13,8 +13,6 @@
It is up to the user to ensure binary compatibility between the deprecated
installation and its deprecator.
"""
from __future__ import print_function
import argparse
import os
@@ -28,7 +26,7 @@
from spack.database import InstallStatuses
from spack.error import SpackError
description = "Replace one package with another via symlinks"
description = "replace one package with another via symlinks"
section = "admin"
level = "long"
@@ -48,7 +46,7 @@ def setup_parser(sp):
action="store_true",
default=True,
dest="dependencies",
help="Deprecate dependencies (default)",
help="deprecate dependencies (default)",
)
deps.add_argument(
"-D",
@@ -56,7 +54,7 @@ def setup_parser(sp):
action="store_false",
default=True,
dest="dependencies",
help="Do not deprecate dependencies",
help="do not deprecate dependencies",
)
install = sp.add_mutually_exclusive_group()
@@ -66,7 +64,7 @@ def setup_parser(sp):
action="store_true",
default=False,
dest="install",
help="Concretize and install deprecator spec",
help="concretize and install deprecator spec",
)
install.add_argument(
"-I",
@@ -74,7 +72,7 @@ def setup_parser(sp):
action="store_false",
default=False,
dest="install",
help="Deprecator spec must already be installed (default)",
help="deprecator spec must already be installed (default)",
)
sp.add_argument(
@@ -83,7 +81,7 @@ def setup_parser(sp):
type=str,
default="soft",
choices=["soft", "hard"],
help="Type of filesystem link to use for deprecation (default soft)",
help="type of filesystem link to use for deprecation (default soft)",
)
sp.add_argument(

View File

@@ -25,14 +25,14 @@ def setup_parser(subparser):
"--source-path",
dest="source_path",
default=None,
help="path to source directory. defaults to the current directory",
help="path to source directory (defaults to the current directory)",
)
subparser.add_argument(
"-i",
"--ignore-dependencies",
action="store_true",
dest="ignore_deps",
help="don't try to install dependencies of requested packages",
help="do not try to install dependencies of requested packages",
)
arguments.add_common_arguments(subparser, ["no_checksum", "deprecated"])
subparser.add_argument(
@@ -55,16 +55,13 @@ def setup_parser(subparser):
type=str,
dest="shell",
default=None,
help="drop into a build environment in a new shell, e.g. bash, zsh",
help="drop into a build environment in a new shell, e.g., bash",
)
subparser.add_argument(
"--test",
default=None,
choices=["root", "all"],
help="""If 'root' is chosen, run package tests during
installation for top-level packages (but skip tests for dependencies).
if 'all' is chosen, run package tests during installation for all
packages. If neither are chosen, don't run tests for any packages.""",
help="run tests on only root packages or all packages",
)
arguments.add_common_arguments(subparser, ["spec"])

View File

@@ -20,7 +20,7 @@
def setup_parser(subparser):
subparser.add_argument("-p", "--path", help="Source location of package")
subparser.add_argument("-p", "--path", help="source location of package")
clone_group = subparser.add_mutually_exclusive_group()
clone_group.add_argument(
@@ -28,18 +28,18 @@ def setup_parser(subparser):
action="store_false",
dest="clone",
default=None,
help="Do not clone. The package already exists at the source path",
help="do not clone, the package already exists at the source path",
)
clone_group.add_argument(
"--clone",
action="store_true",
dest="clone",
default=None,
help="Clone the package even if the path already exists",
help="clone the package even if the path already exists",
)
subparser.add_argument(
"-f", "--force", help="Remove any files or directories that block cloning source code"
"-f", "--force", help="remove any files or directories that block cloning source code"
)
arguments.add_common_arguments(subparser, ["spec"])

View File

@@ -29,7 +29,7 @@ def setup_parser(subparser):
action="store_true",
default=False,
dest="dump_json",
help="Dump json output instead of pretty printing.",
help="dump json output instead of pretty printing",
)
subparser.add_argument(
"--first",

View File

@@ -62,7 +62,7 @@ def setup_parser(subparser):
dest="path",
action="store_const",
const=spack.paths.build_systems_path,
help="Edit the build system with the supplied name.",
help="edit the build system with the supplied name",
)
excl_args.add_argument(
"-c",

View File

@@ -102,7 +102,7 @@ def env_activate_setup_parser(subparser):
dest="with_view",
const=True,
default=True,
help="update PATH etc. with associated view",
help="update PATH, etc., with associated view",
)
view_options.add_argument(
"-V",
@@ -111,7 +111,7 @@ def env_activate_setup_parser(subparser):
dest="with_view",
const=False,
default=True,
help="do not update PATH etc. with associated view",
help="do not update PATH, etc., with associated view",
)
subparser.add_argument(
@@ -161,7 +161,7 @@ def env_activate(args):
# Error out when -e, -E, -D flags are given, cause they are ambiguous.
if args.env or args.no_env or args.env_dir:
tty.die("Calling spack env activate with --env, --env-dir and --no-env " "is ambiguous")
tty.die("Calling spack env activate with --env, --env-dir and --no-env is ambiguous")
env_name_or_dir = args.activate_env or args.dir
@@ -250,7 +250,7 @@ def env_deactivate(args):
# Error out when -e, -E, -D flags are given, cause they are ambiguous.
if args.env or args.no_env or args.env_dir:
tty.die("Calling spack env deactivate with --env, --env-dir and --no-env " "is ambiguous")
tty.die("Calling spack env deactivate with --env, --env-dir and --no-env is ambiguous")
if ev.active_environment() is None:
tty.die("No environment is currently active.")
@@ -290,7 +290,7 @@ def env_create_setup_parser(subparser):
"envfile",
nargs="?",
default=None,
help="either a lockfile (must end with '.json' or '.lock') or a manifest file.",
help="either a lockfile (must end with '.json' or '.lock') or a manifest file",
)
@@ -418,7 +418,7 @@ def env_list(args):
colify(color_names, indent=4)
class ViewAction(object):
class ViewAction:
regenerate = "regenerate"
enable = "enable"
disable = "disable"
@@ -608,16 +608,16 @@ def env_depfile_setup_parser(subparser):
"--make-target-prefix",
default=None,
metavar="TARGET",
help="prefix Makefile targets (and variables) with <TARGET>/<name>. By default "
help="prefix Makefile targets (and variables) with <TARGET>/<name>\n\nby default "
"the absolute path to the directory makedeps under the environment metadata dir is "
"used. Can be set to an empty string --make-prefix ''.",
"used. can be set to an empty string --make-prefix ''",
)
subparser.add_argument(
"--make-disable-jobserver",
default=True,
action="store_false",
dest="jobserver",
help="disable POSIX jobserver support.",
help="disable POSIX jobserver support",
)
subparser.add_argument(
"--use-buildcache",
@@ -625,8 +625,8 @@ def env_depfile_setup_parser(subparser):
type=arguments.use_buildcache,
default="package:auto,dependencies:auto",
metavar="[{auto,only,never},][package:{auto,only,never},][dependencies:{auto,only,never}]",
help="When using `only`, redundant build dependencies are pruned from the DAG. "
"This flag is passed on to the generated spack install commands.",
help="when using `only`, redundant build dependencies are pruned from the DAG\n\n"
"this flag is passed on to the generated spack install commands",
)
subparser.add_argument(
"-o",
@@ -640,7 +640,7 @@ def env_depfile_setup_parser(subparser):
"--generator",
default="make",
choices=("make",),
help="specify the depfile type. Currently only make is supported.",
help="specify the depfile type\n\ncurrently only make is supported",
)
subparser.add_argument(
metavar="specs",

View File

@@ -22,7 +22,7 @@
def setup_parser(subparser):
subparser.epilog = (
"If called without argument returns " "the list of all valid extendable packages"
"If called without argument returns the list of all valid extendable packages"
)
arguments.add_common_arguments(subparser, ["long", "very_long"])
subparser.add_argument(

View File

@@ -2,8 +2,6 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import errno
import os
@@ -44,7 +42,7 @@ def setup_parser(subparser):
"--path",
default=None,
action="append",
help="Alternative search paths for finding externals. May be repeated",
help="one or more alternative search paths for finding externals",
)
find_parser.add_argument(
"--scope",
@@ -68,10 +66,8 @@ def setup_parser(subparser):
read_cray_manifest = sp.add_parser(
"read-cray-manifest",
help=(
"consume a Spack-compatible description of externally-installed "
"packages, including dependency relationships"
),
help="consume a Spack-compatible description of externally-installed packages, including "
"dependency relationships",
)
read_cray_manifest.add_argument(
"--file", default=None, help="specify a location other than the default"
@@ -94,7 +90,7 @@ def setup_parser(subparser):
read_cray_manifest.add_argument(
"--fail-on-error",
action="store_true",
help=("if a manifest file cannot be parsed, fail and report the " "full stack trace"),
help="if a manifest file cannot be parsed, fail and report the full stack trace",
)
@@ -113,14 +109,14 @@ def external_find(args):
# For most exceptions, just print a warning and continue.
# Note that KeyboardInterrupt does not subclass Exception
# (so CTRL-C will terminate the program as expected).
skip_msg = "Skipping manifest and continuing with other external " "checks"
skip_msg = "Skipping manifest and continuing with other external checks"
if (isinstance(e, IOError) or isinstance(e, OSError)) and e.errno in [
errno.EPERM,
errno.EACCES,
]:
# The manifest file does not have sufficient permissions enabled:
# print a warning and keep going
tty.warn("Unable to read manifest due to insufficient " "permissions.", skip_msg)
tty.warn("Unable to read manifest due to insufficient permissions.", skip_msg)
else:
tty.warn("Unable to read manifest, unexpected error: {0}".format(str(e)), skip_msg)
@@ -170,7 +166,7 @@ def external_find(args):
)
if new_entries:
path = spack.config.config.get_config_filename(args.scope, "packages")
msg = "The following specs have been detected on this system " "and added to {0}"
msg = "The following specs have been detected on this system and added to {0}"
tty.msg(msg.format(path))
spack.cmd.display_specs(new_entries)
else:
@@ -238,7 +234,7 @@ def _collect_and_consume_cray_manifest_files(
if fail_on_error:
raise
else:
tty.warn("Failure reading manifest file: {0}" "\n\t{1}".format(path, str(e)))
tty.warn("Failure reading manifest file: {0}\n\t{1}".format(path, str(e)))
def external_list(args):

View File

@@ -51,9 +51,7 @@ def fetch(parser, args):
else:
specs = env.all_specs()
if specs == []:
tty.die(
"No uninstalled specs in environment. Did you " "run `spack concretize` yet?"
)
tty.die("No uninstalled specs in environment. Did you run `spack concretize` yet?")
else:
tty.die("fetch requires at least one spec argument")

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import copy
import sys
@@ -32,6 +30,14 @@ def setup_parser(subparser):
default=None,
help="output specs with the specified format string",
)
format_group.add_argument(
"-H",
"--hashes",
action="store_const",
dest="format",
const="{/hash}",
help="same as '--format {/hash}'; use with xargs or $()",
)
format_group.add_argument(
"--json",
action="store_true",

View File

@@ -68,7 +68,7 @@ def setup_parser(subparser):
metavar="DEST",
type=str,
dest="secret",
help="export the private key to a file.",
help="export the private key to a file",
)
create.set_defaults(func=gpg_create)
@@ -86,7 +86,7 @@ def setup_parser(subparser):
export = subparsers.add_parser("export", help=gpg_export.__doc__)
export.add_argument("location", type=str, help="where to export keys")
export.add_argument(
"keys", nargs="*", help="the keys to export; " "all public keys if unspecified"
"keys", nargs="*", help="the keys to export (all public keys if unspecified)"
)
export.add_argument("--secret", action="store_true", help="export secret keys")
export.set_defaults(func=gpg_export)
@@ -99,29 +99,29 @@ def setup_parser(subparser):
"--directory",
metavar="directory",
type=str,
help="local directory where keys will be published.",
help="local directory where keys will be published",
)
output.add_argument(
"-m",
"--mirror-name",
metavar="mirror-name",
type=str,
help="name of the mirror where " + "keys will be published.",
help="name of the mirror where keys will be published",
)
output.add_argument(
"--mirror-url",
metavar="mirror-url",
type=str,
help="URL of the mirror where " + "keys will be published.",
help="URL of the mirror where keys will be published",
)
publish.add_argument(
"--rebuild-index",
action="store_true",
default=False,
help=("Regenerate buildcache key index " "after publishing key(s)"),
help="regenerate buildcache key index after publishing key(s)",
)
publish.add_argument(
"keys", nargs="*", help="the keys to publish; " "all public keys if unspecified"
"keys", nargs="*", help="keys to publish (all public keys if unspecified)"
)
publish.set_defaults(func=gpg_publish)
@@ -146,7 +146,7 @@ def gpg_create(args):
def gpg_export(args):
"""export a gpg key, optionally including secret key."""
"""export a gpg key, optionally including secret key"""
keys = args.keys
if not keys:
keys = spack.util.gpg.signing_keys()
@@ -168,7 +168,7 @@ def gpg_sign(args):
elif not keys:
raise RuntimeError("no signing keys are available")
else:
raise RuntimeError("multiple signing keys are available; " "please choose one")
raise RuntimeError("multiple signing keys are available; please choose one")
output = args.output
if not output:
output = args.spec[0] + ".asc"
@@ -216,7 +216,7 @@ def gpg_publish(args):
url = spack.util.url.path_to_file_url(args.directory)
mirror = spack.mirror.Mirror(url, url)
elif args.mirror_name:
mirror = spack.mirror.MirrorCollection().lookup(args.mirror_name)
mirror = spack.mirror.MirrorCollection(binary=True).lookup(args.mirror_name)
elif args.mirror_url:
mirror = spack.mirror.Mirror(args.mirror_url, args.mirror_url)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import textwrap
from itertools import zip_longest
@@ -73,7 +71,7 @@ def variant(s):
return spack.spec.enabled_variant_color + s + plain_format
class VariantFormatter(object):
class VariantFormatter:
def __init__(self, variants):
self.variants = variants
self.headers = ("Name [Default]", "When", "Allowed values", "Description")

View File

@@ -75,10 +75,9 @@ def setup_parser(subparser):
default="package,dependencies",
dest="things_to_install",
choices=["package", "dependencies"],
help="""select the mode of installation.
the default is to install the package along with all its dependencies.
alternatively one can decide to install only the package or only
the dependencies""",
help="select the mode of installation\n\n"
"default is to install the package along with all its dependencies. "
"alternatively, one can decide to install only the package or only the dependencies",
)
subparser.add_argument(
"-u",
@@ -143,12 +142,11 @@ def setup_parser(subparser):
type=arguments.use_buildcache,
default="package:auto,dependencies:auto",
metavar="[{auto,only,never},][package:{auto,only,never},][dependencies:{auto,only,never}]",
help="""select the mode of buildcache for the 'package' and 'dependencies'.
Default: package:auto,dependencies:auto
- `auto` behaves like --use-cache
- `only` behaves like --cache-only
- `never` behaves like --no-cache
""",
help="select the mode of buildcache for the 'package' and 'dependencies'\n\n"
"default: package:auto,dependencies:auto\n\n"
"- `auto` behaves like --use-cache\n"
"- `only` behaves like --cache-only\n"
"- `never` behaves like --no-cache",
)
subparser.add_argument(
@@ -156,8 +154,8 @@ def setup_parser(subparser):
action="store_true",
dest="include_build_deps",
default=False,
help="""include build deps when installing from cache,
which is useful for CI pipeline troubleshooting""",
help="include build deps when installing from cache, "
"useful for CI pipeline troubleshooting",
)
subparser.add_argument(
@@ -186,7 +184,7 @@ def setup_parser(subparser):
dest="install_verbose",
help="display verbose build output while installing",
)
subparser.add_argument("--fake", action="store_true", help="fake install for debug purposes.")
subparser.add_argument("--fake", action="store_true", help="fake install for debug purposes")
subparser.add_argument(
"--only-concrete",
action="store_true",
@@ -199,14 +197,13 @@ def setup_parser(subparser):
"--add",
action="store_true",
default=False,
help="""(with environment) add spec to the environment as a root.""",
help="(with environment) add spec to the environment as a root",
)
updateenv_group.add_argument(
"--no-add",
action="store_false",
dest="add",
help="""(with environment) do not add spec to the environment as a
root (the default behavior).""",
help="(with environment) do not add spec to the environment as a root",
)
subparser.add_argument(
@@ -216,7 +213,7 @@ def setup_parser(subparser):
default=[],
dest="specfiles",
metavar="SPEC_YAML_FILE",
help="install from file. Read specs to install from .yaml files",
help="read specs to install from .yaml files",
)
cd_group = subparser.add_mutually_exclusive_group()
@@ -227,19 +224,12 @@ def setup_parser(subparser):
"--test",
default=None,
choices=["root", "all"],
help="""If 'root' is chosen, run package tests during
installation for top-level packages (but skip tests for dependencies).
if 'all' is chosen, run package tests during installation for all
packages. If neither are chosen, don't run tests for any packages.""",
help="run tests on only root packages or all packages",
)
arguments.add_common_arguments(subparser, ["log_format"])
subparser.add_argument("--log-file", default=None, help="filename for the log file")
subparser.add_argument(
"--log-file",
default=None,
help="filename for the log file. if not passed a default will be used",
)
subparser.add_argument(
"--help-cdash", action="store_true", help="Show usage instructions for CDash reporting"
"--help-cdash", action="store_true", help="show usage instructions for CDash reporting"
)
arguments.add_cdash_args(subparser, False)
arguments.add_common_arguments(subparser, ["yes_to_all", "spec"])
@@ -280,7 +270,7 @@ def require_user_confirmation_for_overwrite(concrete_specs, args):
display_args = {"long": True, "show_flags": True, "variants": True}
if installed:
tty.msg("The following package specs will be " "reinstalled:\n")
tty.msg("The following package specs will be reinstalled:\n")
spack.cmd.display_specs(installed, **display_args)
not_installed = list(filter(lambda x: x not in installed, concrete_specs))

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import re
from collections import defaultdict
@@ -102,7 +100,7 @@ def list_files(args):
]
class LicenseError(object):
class LicenseError:
def __init__(self):
self.error_counts = defaultdict(int)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import division, print_function
import argparse
import fnmatch
import json

View File

@@ -66,10 +66,9 @@ def setup_parser(subparser):
default="package,dependencies",
dest="things_to_load",
choices=["package", "dependencies"],
help="""select whether to load the package and its dependencies
the default is to load the package and all dependencies
alternatively one can decide to load only the package or only
the dependencies""",
help="select whether to load the package and its dependencies\n\n"
"the default is to load the package and all dependencies. alternatively, "
"one can decide to load only the package or only the dependencies",
)
subparser.add_argument(

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import llnl.util.tty as tty
@@ -57,13 +55,13 @@ def setup_parser(subparser):
directories.add_argument(
"--source-dir",
action="store_true",
help="source directory for a spec " "(requires it to be staged first)",
help="source directory for a spec (requires it to be staged first)",
)
directories.add_argument(
"-b",
"--build-dir",
action="store_true",
help="build directory for a spec " "(requires it to be staged first)",
help="build directory for a spec (requires it to be staged first)",
)
directories.add_argument(
"-e",
@@ -164,7 +162,7 @@ def location(parser, args):
# source dir remains, which requires the spec to be staged
if not pkg.stage.expanded:
tty.die(
"Source directory does not exist yet. " "Run this to create it:",
"Source directory does not exist yet. Run this to create it:",
"spack stage " + " ".join(args.spec),
)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
from collections import defaultdict

View File

@@ -39,7 +39,7 @@ def line_to_rtf(str):
def setup_parser(subparser):
spack_source_group = subparser.add_mutually_exclusive_group(required=True)
spack_source_group.add_argument(
"-v", "--spack-version", default="", help="download given spack version e.g. 0.16.0"
"-v", "--spack-version", default="", help="download given spack version"
)
spack_source_group.add_argument(
"-s", "--spack-source", default="", help="full path to spack source"
@@ -49,9 +49,8 @@ def setup_parser(subparser):
"-g",
"--git-installer-verbosity",
default="",
choices=set(["SILENT", "VERYSILENT"]),
help="Level of verbosity provided by bundled Git Installer.\
Default is fully verbose",
choices=["SILENT", "VERYSILENT"],
help="level of verbosity provided by bundled git installer (default is fully verbose)",
required=False,
action="store",
dest="git_verbosity",

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import sys
from llnl.util import tty
@@ -37,10 +35,7 @@ def setup_parser(subparser):
"--all",
action="store_true",
dest="all",
help="Mark ALL installed packages that match each "
"supplied spec. If you `mark --all libelf`,"
" ALL versions of `libelf` are marked. If no spec is "
"supplied, all installed packages will be marked.",
help="mark ALL installed packages that match each supplied spec",
)
exim = subparser.add_mutually_exclusive_group(required=True)
exim.add_argument(
@@ -48,14 +43,14 @@ def setup_parser(subparser):
"--explicit",
action="store_true",
dest="explicit",
help="Mark packages as explicitly installed.",
help="mark packages as explicitly installed",
)
exim.add_argument(
"-i",
"--implicit",
action="store_true",
dest="implicit",
help="Mark packages as implicitly installed.",
help="mark packages as implicitly installed",
)

View File

@@ -21,7 +21,6 @@
import spack.util.path
import spack.util.web as web_util
from spack.error import SpackError
from spack.util.spack_yaml import syaml_dict
description = "manage mirrors (source and binary)"
section = "config"
@@ -55,13 +54,13 @@ def setup_parser(subparser):
)
create_parser.add_argument(
"--exclude-specs",
help="specs which Spack should not try to add to a mirror" " (specified on command line)",
help="specs which Spack should not try to add to a mirror (specified on command line)",
)
create_parser.add_argument(
"--skip-unstable-versions",
action="store_true",
help="don't cache versions unless they identify a stable (unchanging)" " source code",
help="don't cache versions unless they identify a stable (unchanging) source code",
)
create_parser.add_argument(
"-D", "--dependencies", action="store_true", help="also fetch all dependencies"
@@ -104,6 +103,15 @@ def setup_parser(subparser):
default=spack.config.default_modify_scope(),
help="configuration scope to modify",
)
add_parser.add_argument(
"--type",
action="append",
choices=("binary", "source"),
help=(
"specify the mirror type: for both binary "
"and source use `--type binary --type source` (default)"
),
)
arguments.add_s3_connection_args(add_parser, False)
# Remove
remove_parser = sp.add_parser("remove", aliases=["rm"], help=mirror_remove.__doc__)
@@ -120,8 +128,12 @@ def setup_parser(subparser):
set_url_parser = sp.add_parser("set-url", help=mirror_set_url.__doc__)
set_url_parser.add_argument("name", help="mnemonic name for mirror", metavar="mirror")
set_url_parser.add_argument("url", help="url of mirror directory from 'spack mirror create'")
set_url_parser.add_argument(
"--push", action="store_true", help="set only the URL used for uploading new packages"
set_url_push_or_fetch = set_url_parser.add_mutually_exclusive_group(required=False)
set_url_push_or_fetch.add_argument(
"--push", action="store_true", help="set only the URL used for uploading"
)
set_url_push_or_fetch.add_argument(
"--fetch", action="store_true", help="set only the URL used for downloading"
)
set_url_parser.add_argument(
"--scope",
@@ -132,6 +144,35 @@ def setup_parser(subparser):
)
arguments.add_s3_connection_args(set_url_parser, False)
# Set
set_parser = sp.add_parser("set", help=mirror_set.__doc__)
set_parser.add_argument("name", help="mnemonic name for mirror", metavar="mirror")
set_parser_push_or_fetch = set_parser.add_mutually_exclusive_group(required=False)
set_parser_push_or_fetch.add_argument(
"--push", action="store_true", help="modify just the push connection details"
)
set_parser_push_or_fetch.add_argument(
"--fetch", action="store_true", help="modify just the fetch connection details"
)
set_parser.add_argument(
"--type",
action="append",
choices=("binary", "source"),
help=(
"specify the mirror type: for both binary "
"and source use `--type binary --type source`"
),
)
set_parser.add_argument("--url", help="url of mirror directory from 'spack mirror create'")
set_parser.add_argument(
"--scope",
choices=scopes,
metavar=scopes_metavar,
default=spack.config.default_modify_scope(),
help="configuration scope to modify",
)
arguments.add_s3_connection_args(set_parser, False)
# List
list_parser = sp.add_parser("list", help=mirror_list.__doc__)
list_parser.add_argument(
@@ -144,105 +185,85 @@ def setup_parser(subparser):
def mirror_add(args):
"""Add a mirror to Spack."""
"""add a mirror to Spack"""
if (
args.s3_access_key_id
or args.s3_access_key_secret
or args.s3_access_token
or args.s3_profile
or args.s3_endpoint_url
or args.type
):
connection = {"url": args.url}
if args.s3_access_key_id and args.s3_access_key_secret:
connection["access_pair"] = (args.s3_access_key_id, args.s3_access_key_secret)
connection["access_pair"] = [args.s3_access_key_id, args.s3_access_key_secret]
if args.s3_access_token:
connection["access_token"] = args.s3_access_token
if args.s3_profile:
connection["profile"] = args.s3_profile
if args.s3_endpoint_url:
connection["endpoint_url"] = args.s3_endpoint_url
mirror = spack.mirror.Mirror(fetch_url=connection, push_url=connection, name=args.name)
if args.type:
connection["binary"] = "binary" in args.type
connection["source"] = "source" in args.type
mirror = spack.mirror.Mirror(connection, name=args.name)
else:
mirror = spack.mirror.Mirror(args.url, name=args.name)
spack.mirror.add(mirror, args.scope)
def mirror_remove(args):
"""Remove a mirror by name."""
"""remove a mirror by name"""
spack.mirror.remove(args.name, args.scope)
def mirror_set_url(args):
"""Change the URL of a mirror."""
url = args.url
def _configure_mirror(args):
mirrors = spack.config.get("mirrors", scope=args.scope)
if not mirrors:
mirrors = syaml_dict()
if args.name not in mirrors:
tty.die("No mirror found with name %s." % args.name)
tty.die(f"No mirror found with name {args.name}.")
entry = mirrors[args.name]
key_values = ["s3_access_key_id", "s3_access_token", "s3_profile"]
entry = spack.mirror.Mirror(mirrors[args.name], args.name)
direction = "fetch" if args.fetch else "push" if args.push else None
changes = {}
if args.url:
changes["url"] = args.url
if args.s3_access_key_id and args.s3_access_key_secret:
changes["access_pair"] = [args.s3_access_key_id, args.s3_access_key_secret]
if args.s3_access_token:
changes["access_token"] = args.s3_access_token
if args.s3_profile:
changes["profile"] = args.s3_profile
if args.s3_endpoint_url:
changes["endpoint_url"] = args.s3_endpoint_url
if any(value for value in key_values if value in args):
incoming_data = {
"url": url,
"access_pair": (args.s3_access_key_id, args.s3_access_key_secret),
"access_token": args.s3_access_token,
"profile": args.s3_profile,
"endpoint_url": args.s3_endpoint_url,
}
try:
fetch_url = entry["fetch"]
push_url = entry["push"]
except TypeError:
fetch_url, push_url = entry, entry
# argparse cannot distinguish between --binary and --no-binary when same dest :(
# notice that set-url does not have these args, so getattr
if getattr(args, "type", None):
changes["binary"] = "binary" in args.type
changes["source"] = "source" in args.type
changes_made = False
changed = entry.update(changes, direction)
if args.push:
if isinstance(push_url, dict):
changes_made = changes_made or push_url != incoming_data
push_url = incoming_data
else:
changes_made = changes_made or push_url != url
push_url = url
else:
if isinstance(push_url, dict):
changes_made = changes_made or push_url != incoming_data or push_url != incoming_data
fetch_url, push_url = incoming_data, incoming_data
else:
changes_made = changes_made or push_url != url
fetch_url, push_url = url, url
items = [
(
(n, u)
if n != args.name
else (
(n, {"fetch": fetch_url, "push": push_url})
if fetch_url != push_url
else (n, {"fetch": fetch_url, "push": fetch_url})
)
)
for n, u in mirrors.items()
]
mirrors = syaml_dict(items)
spack.config.set("mirrors", mirrors, scope=args.scope)
if changes_made:
tty.msg(
"Changed%s url or connection information for mirror %s."
% ((" (push)" if args.push else ""), args.name)
)
if changed:
mirrors[args.name] = entry.to_dict()
spack.config.set("mirrors", mirrors, scope=args.scope)
else:
tty.msg("No changes made to mirror %s." % args.name)
def mirror_set(args):
"""Configure the connection details of a mirror"""
_configure_mirror(args)
def mirror_set_url(args):
"""Change the URL of a mirror."""
_configure_mirror(args)
def mirror_list(args):
"""Print out available mirrors to the console."""
"""print out available mirrors to the console"""
mirrors = spack.mirror.MirrorCollection(scope=args.scope)
if not mirrors:
@@ -395,9 +416,7 @@ def process_mirror_stats(present, mirrored, error):
def mirror_create(args):
"""Create a directory to be used as a spack mirror, and fill it with
package archives.
"""
"""create a directory to be used as a spack mirror, and fill it with package archives"""
if args.specs and args.all:
raise SpackError(
"cannot specify specs on command line if you chose to mirror all specs with '--all'"
@@ -470,7 +489,7 @@ def create_mirror_for_all_specs_inside_environment(path, skip_unstable_versions,
def mirror_destroy(args):
"""Given a url, recursively delete everything under it."""
"""given a url, recursively delete everything under it"""
mirror_url = None
if args.mirror_name:
@@ -490,6 +509,7 @@ def mirror(parser, args):
"remove": mirror_remove,
"rm": mirror_remove,
"set-url": mirror_set_url,
"set": mirror_set,
"list": mirror_list,
}

View File

@@ -31,7 +31,7 @@ def setup_parser(subparser):
action="store",
dest="module_set_name",
default="default",
help="Named module set to use from modules configuration.",
help="named module set to use from modules configuration",
)
sp = subparser.add_subparsers(metavar="SUBCOMMAND", dest="subparser_name")

View File

@@ -30,7 +30,7 @@ def add_command(parser, command_dict):
def setdefault(module_type, specs, args):
"""Set the default module file, when multiple are present"""
"""set the default module file, when multiple are present"""
# For details on the underlying mechanism see:
#
# https://lmod.readthedocs.io/en/latest/060_locating.html#marking-a-version-as-default

View File

@@ -29,7 +29,7 @@ def add_command(parser, command_dict):
def setdefault(module_type, specs, args):
"""Set the default module file, when multiple are present"""
"""set the default module file, when multiple are present"""
# Currently, accepts only a single matching spec
spack.cmd.modules.one_spec_or_raise(specs)
spec = specs[0]

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import itertools
import os
@@ -60,7 +58,7 @@ def setup_parser(subparser):
"--type",
action="store",
default="C",
help="Types of changes to show (A: added, R: removed, " "C: changed); default is 'C'",
help="types of changes to show (A: added, R: removed, C: changed); default is 'C'",
)
rm_parser = sp.add_parser("removed", help=pkg_removed.__doc__)
@@ -83,7 +81,7 @@ def setup_parser(subparser):
"--canonical",
action="store_true",
default=False,
help="dump canonical source as used by package hash.",
help="dump canonical source as used by package hash",
)
arguments.add_common_arguments(source_parser, ["spec"])

View File

@@ -17,9 +17,7 @@
def setup_parser(subparser):
subparser.epilog = (
"If called without argument returns " "the list of all valid virtual packages"
)
subparser.epilog = "If called without argument returns the list of all valid virtual packages"
subparser.add_argument(
"virtual_package", nargs="*", help="find packages that provide this virtual package"
)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import code
import os

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import sys
@@ -29,7 +27,7 @@ def setup_parser(subparser):
create_parser.add_argument("directory", help="directory to create the repo in")
create_parser.add_argument(
"namespace",
help="namespace to identify packages in the repository. " "defaults to the directory name",
help="namespace to identify packages in the repository (defaults to the directory name)",
nargs="?",
)
create_parser.add_argument(
@@ -38,10 +36,8 @@ def setup_parser(subparser):
action="store",
dest="subdir",
default=spack.repo.packages_dir_name,
help=(
"subdirectory to store packages in the repository."
" Default 'packages'. Use an empty string for no subdirectory."
),
help="subdirectory to store packages in the repository\n\n"
"default 'packages'. use an empty string for no subdirectory",
)
# List
@@ -80,14 +76,14 @@ def setup_parser(subparser):
def repo_create(args):
"""Create a new package repository."""
"""create a new package repository"""
full_path, namespace = spack.repo.create_repo(args.directory, args.namespace, args.subdir)
tty.msg("Created repo with namespace '%s'." % namespace)
tty.msg("To register it with spack, run this command:", "spack repo add %s" % full_path)
def repo_add(args):
"""Add a package source to Spack's configuration."""
"""add a package source to Spack's configuration"""
path = args.path
# real_path is absolute and handles substitution.
@@ -118,7 +114,7 @@ def repo_add(args):
def repo_remove(args):
"""Remove a repository from Spack's configuration."""
"""remove a repository from Spack's configuration"""
repos = spack.config.get("repos", scope=args.scope)
namespace_or_path = args.namespace_or_path
@@ -148,7 +144,7 @@ def repo_remove(args):
def repo_list(args):
"""Show registered repositories and their namespaces."""
"""show registered repositories and their namespaces"""
roots = spack.config.get("repos", scope=args.scope)
repos = []
for r in roots:

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os
import llnl.util.tty as tty

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import re
import sys
@@ -35,7 +33,7 @@ def setup_parser(subparser):
"--show",
action="store",
default="opt,solutions",
help="select outputs: comma-separated list of: \n"
help="select outputs\n\ncomma-separated list of:\n"
" asp asp program text\n"
" opt optimization criteria for best model\n"
" output raw clingo output\n"

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import sys
import llnl.util.lang as lang

View File

@@ -60,7 +60,7 @@ def is_package(f):
#: decorator for adding tools to the list
class tool(object):
class tool:
def __init__(self, name, required=False):
self.name = name
self.required = required

View File

@@ -12,7 +12,7 @@
import spack.store
import spack.tag
description = "Show package tags and associated packages"
description = "show package tags and associated packages"
section = "basic"
level = "long"

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import fnmatch
import os
@@ -37,39 +35,35 @@ def setup_parser(subparser):
"run", description=test_run.__doc__, help=spack.cmd.first_line(test_run.__doc__)
)
alias_help_msg = "Provide an alias for this test-suite"
alias_help_msg += " for subsequent access."
run_parser.add_argument("--alias", help=alias_help_msg)
run_parser.add_argument(
"--alias", help="provide an alias for this test-suite for subsequent access"
)
run_parser.add_argument(
"--fail-fast",
action="store_true",
help="Stop tests for each package after the first failure.",
help="stop tests for each package after the first failure",
)
run_parser.add_argument(
"--fail-first", action="store_true", help="Stop after the first failed package."
"--fail-first", action="store_true", help="stop after the first failed package"
)
run_parser.add_argument(
"--externals", action="store_true", help="Test packages that are externally installed."
"--externals", action="store_true", help="test packages that are externally installed"
)
run_parser.add_argument(
"-x",
"--explicit",
action="store_true",
help="Only test packages that are explicitly installed.",
help="only test packages that are explicitly installed",
)
run_parser.add_argument(
"--keep-stage", action="store_true", help="Keep testing directory for debugging"
"--keep-stage", action="store_true", help="keep testing directory for debugging"
)
arguments.add_common_arguments(run_parser, ["log_format"])
run_parser.add_argument(
"--log-file",
default=None,
help="filename for the log file. if not passed a default will be used",
)
run_parser.add_argument("--log-file", default=None, help="filename for the log file")
arguments.add_cdash_args(run_parser, False)
run_parser.add_argument(
"--help-cdash", action="store_true", help="Show usage instructions for CDash reporting"
"--help-cdash", action="store_true", help="show usage instructions for CDash reporting"
)
cd_group = run_parser.add_mutually_exclusive_group()
@@ -98,7 +92,7 @@ def setup_parser(subparser):
find_parser.add_argument(
"filter",
nargs=argparse.REMAINDER,
help="optional case-insensitive glob patterns to filter results.",
help="optional case-insensitive glob patterns to filter results",
)
# Status
@@ -106,7 +100,7 @@ def setup_parser(subparser):
"status", description=test_status.__doc__, help=spack.cmd.first_line(test_status.__doc__)
)
status_parser.add_argument(
"names", nargs=argparse.REMAINDER, help="Test suites for which to print status"
"names", nargs=argparse.REMAINDER, help="test suites for which to print status"
)
# Results
@@ -144,15 +138,15 @@ def setup_parser(subparser):
)
arguments.add_common_arguments(remove_parser, ["yes_to_all"])
remove_parser.add_argument(
"names", nargs=argparse.REMAINDER, help="Test suites to remove from test stage"
"names", nargs=argparse.REMAINDER, help="test suites to remove from test stage"
)
def test_run(args):
"""Run tests for the specified installed packages.
"""run tests for the specified installed packages
If no specs are listed, run tests for all packages in the current
environment or all installed packages if there is no active environment.
if no specs are listed, run tests for all packages in the current
environment or all installed packages if there is no active environment
"""
if args.alias:
suites = spack.install_test.get_named_test_suites(args.alias)
@@ -233,7 +227,7 @@ def create_reporter(args, specs_to_test, test_suite):
def test_list(args):
"""List installed packages with available tests."""
"""list installed packages with available tests"""
tagged = set(spack.repo.path.packages_with_tags(*args.tag)) if args.tag else set()
def has_test_and_tags(pkg_class):
@@ -265,10 +259,10 @@ def has_test_and_tags(pkg_class):
def test_find(args): # TODO: merge with status (noargs)
"""Find tests that are running or have available results.
"""find tests that are running or have available results
Displays aliases for tests that have them, otherwise test suite content
hashes."""
displays aliases for tests that have them, otherwise test suite content hashes
"""
test_suites = spack.install_test.get_all_test_suites()
# Filter tests by filter argument
@@ -304,7 +298,7 @@ def match(t, f):
def test_status(args):
"""Get the current status for the specified Spack test suite(s)."""
"""get the current status for the specified Spack test suite(s)"""
if args.names:
test_suites = []
for name in args.names:
@@ -389,7 +383,7 @@ def _report_suite_results(test_suite, args, constraints):
def test_results(args):
"""Get the results from Spack test suite(s) (default all)."""
"""get the results from Spack test suite(s) (default all)"""
if args.names:
try:
sep_index = args.names.index("--")
@@ -416,12 +410,13 @@ def test_results(args):
def test_remove(args):
"""Remove results from Spack test suite(s) (default all).
"""remove results from Spack test suite(s) (default all)
If no test suite is listed, remove results for all suites.
if no test suite is listed, remove results for all suites.
Removed tests can no longer be accessed for results or status, and will not
appear in `spack test list` results."""
removed tests can no longer be accessed for results or status, and will not
appear in `spack test list` results
"""
if args.names:
test_suites = []
for name in args.names:

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import os.path
import shutil

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import sys
from typing import Dict, List, Optional
@@ -56,7 +54,7 @@ def setup_parser(subparser):
"--force",
action="store_true",
dest="force",
help="remove regardless of whether other packages or environments " "depend on this one",
help="remove regardless of whether other packages or environments depend on this one",
)
subparser.add_argument(
"--remove",

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import division, print_function
import argparse
import collections
import io

View File

@@ -53,15 +53,15 @@ def setup_parser(subparser):
)
subparser.add_argument(
"-a", "--all", action="store_true", help="unload all loaded Spack packages."
"-a", "--all", action="store_true", help="unload all loaded Spack packages"
)
def unload(parser, args):
"""Unload spack packages from the user environment."""
"""unload spack packages from the user environment"""
if args.specs and args.all:
raise spack.error.SpackError(
"Cannot specify specs on command line" " when unloading all specs with '--all'"
"Cannot specify specs on command line when unloading all specs with '--all'"
)
hashes = os.environ.get(uenv.spack_loaded_hashes_var, "").split(":")

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import division, print_function
import urllib.parse
from collections import defaultdict
@@ -290,7 +288,7 @@ def url_stats(args):
# dictionary of issue type -> package -> descriptions
issues = defaultdict(lambda: defaultdict(lambda: []))
class UrlStats(object):
class UrlStats:
def __init__(self):
self.total = 0
self.schemes = defaultdict(lambda: 0)

View File

@@ -2,8 +2,6 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import argparse
import llnl.util.tty as tty
@@ -12,7 +10,7 @@
import spack.store
import spack.verify
description = "Check that all spack packages are on disk as installed"
description = "check that all spack packages are on disk as installed"
section = "admin"
level = "long"
@@ -21,14 +19,14 @@ def setup_parser(subparser):
setup_parser.parser = subparser
subparser.add_argument(
"-l", "--local", action="store_true", help="Verify only locally installed packages"
"-l", "--local", action="store_true", help="verify only locally installed packages"
)
subparser.add_argument(
"-j", "--json", action="store_true", help="Ouptut json-formatted errors"
"-j", "--json", action="store_true", help="ouptut json-formatted errors"
)
subparser.add_argument("-a", "--all", action="store_true", help="Verify all packages")
subparser.add_argument("-a", "--all", action="store_true", help="verify all packages")
subparser.add_argument(
"specs_or_files", nargs=argparse.REMAINDER, help="Specs or files to verify"
"specs_or_files", nargs=argparse.REMAINDER, help="specs or files to verify"
)
type = subparser.add_mutually_exclusive_group()
@@ -39,7 +37,7 @@ def setup_parser(subparser):
const="specs",
dest="type",
default="specs",
help="Treat entries as specs (default)",
help="treat entries as specs (default)",
)
type.add_argument(
"-f",
@@ -48,7 +46,7 @@ def setup_parser(subparser):
const="files",
dest="type",
default="specs",
help="Treat entries as absolute filenames. Cannot be used with '-a'",
help="treat entries as absolute filenames\n\ncannot be used with '-a'",
)

View File

@@ -3,8 +3,6 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from __future__ import print_function
import sys
import llnl.util.tty as tty
@@ -28,7 +26,7 @@ def setup_parser(subparser):
output.add_argument(
"--safe-only",
action="store_true",
help="[deprecated] only list safe versions " "of the package",
help="[deprecated] only list safe versions of the package",
)
output.add_argument(
"-r", "--remote", action="store_true", help="only list remote versions of the package"
@@ -37,7 +35,7 @@ def setup_parser(subparser):
"-n",
"--new",
action="store_true",
help="only list remote versions newer than " "the latest checksummed version",
help="only list remote versions newer than the latest checksummed version",
)
subparser.add_argument(
"-c", "--concurrency", default=32, type=int, help="number of concurrent requests"

View File

@@ -44,7 +44,7 @@
from spack.filesystem_view import YamlFilesystemView, view_func_parser
from spack.util import spack_yaml as s_yaml
description = "project packages to a compact naming scheme on the filesystem."
description = "project packages to a compact naming scheme on the filesystem"
section = "environments"
level = "short"
@@ -81,7 +81,7 @@ def setup_parser(sp):
"--verbose",
action="store_true",
default=False,
help="If not verbose only warnings/errors will be printed.",
help="if not verbose only warnings/errors will be printed",
)
sp.add_argument(
"-e",
@@ -95,7 +95,7 @@ def setup_parser(sp):
"--dependencies",
choices=["true", "false", "yes", "no"],
default="true",
help="Link/remove/list dependencies.",
help="link/remove/list dependencies",
)
ssp = sp.add_subparsers(metavar="ACTION", dest="action")
@@ -137,12 +137,11 @@ def setup_parser(sp):
if cmd in ("symlink", "hardlink", "copy"):
# invalid for remove/statlink, for those commands the view needs to
# already know its own projections.
help_msg = "Initialize view using projections from file."
act.add_argument(
"--projection-file",
dest="projection_file",
type=spack.cmd.extant_file,
help=help_msg,
help="initialize view using projections from file",
)
if cmd == "remove":
@@ -150,7 +149,7 @@ def setup_parser(sp):
act.add_argument(
"--no-remove-dependents",
action="store_true",
help="Do not remove dependents of specified specs.",
help="do not remove dependents of specified specs",
)
# with all option, spec is an optional argument

View File

@@ -189,7 +189,7 @@ def in_system_subdirectory(path):
return any(path_contains_subdirectory(path, x) for x in system_dirs)
class Compiler(object):
class Compiler:
"""This class encapsulates a Spack "compiler", which includes C,
C++, and Fortran compilers. Subclasses should implement
support for specific compilers, their possible names, arguments,
@@ -673,17 +673,17 @@ class CompilerAccessError(spack.error.SpackError):
def __init__(self, compiler, paths):
msg = "Compiler '%s' has executables that are missing" % compiler.spec
msg += " or are not executable: %s" % paths
super(CompilerAccessError, self).__init__(msg)
super().__init__(msg)
class InvalidCompilerError(spack.error.SpackError):
def __init__(self):
super(InvalidCompilerError, self).__init__("Compiler has no executables.")
super().__init__("Compiler has no executables.")
class UnsupportedCompilerFlag(spack.error.SpackError):
def __init__(self, compiler, feature, flag_name, ver_string=None):
super(UnsupportedCompilerFlag, self).__init__(
super().__init__(
"{0} ({1}) does not support {2} (as compiler.{3}).".format(
compiler.name, ver_string if ver_string else compiler.version, feature, flag_name
),

View File

@@ -369,7 +369,7 @@ def compiler_specs_for_arch(arch_spec, scope=None):
return [c.spec for c in compilers_for_arch(arch_spec, scope)]
class CacheReference(object):
class CacheReference:
"""This acts as a hashable reference to any object (regardless of whether
the object itself is hashable) and also prevents the object from being
garbage-collected (so if two CacheReference objects are equal, they
@@ -515,7 +515,7 @@ def compiler_for_spec(compiler_spec, arch_spec):
if len(compilers) < 1:
raise NoCompilerForSpecError(compiler_spec, arch_spec.os)
if len(compilers) > 1:
msg = "Multiple definitions of compiler %s" % compiler_spec
msg = "Multiple definitions of compiler %s " % compiler_spec
msg += "for architecture %s:\n %s" % (arch_spec, compilers)
tty.debug(msg)
return compilers[0]
@@ -820,7 +820,7 @@ def name_matches(name, name_list):
class InvalidCompilerConfigurationError(spack.error.SpackError):
def __init__(self, compiler_spec):
super(InvalidCompilerConfigurationError, self).__init__(
super().__init__(
'Invalid configuration for [compiler "%s"]: ' % compiler_spec,
"Compiler configuration must contain entries for all compilers: %s"
% _path_instance_vars,
@@ -829,19 +829,17 @@ def __init__(self, compiler_spec):
class NoCompilersError(spack.error.SpackError):
def __init__(self):
super(NoCompilersError, self).__init__("Spack could not find any compilers!")
super().__init__("Spack could not find any compilers!")
class UnknownCompilerError(spack.error.SpackError):
def __init__(self, compiler_name):
super(UnknownCompilerError, self).__init__(
"Spack doesn't support the requested compiler: {0}".format(compiler_name)
)
super().__init__("Spack doesn't support the requested compiler: {0}".format(compiler_name))
class NoCompilerForSpecError(spack.error.SpackError):
def __init__(self, compiler_spec, target):
super(NoCompilerForSpecError, self).__init__(
super().__init__(
"No compilers for operating system %s satisfy spec %s" % (target, compiler_spec)
)
@@ -860,11 +858,9 @@ def __init__(self, compiler_spec, arch_spec):
+ " in the following files:\n\t"
+ "\n\t".join(duplicate_msg(x, y) for x, y in duplicate_table)
)
super(CompilerDuplicateError, self).__init__(msg)
super().__init__(msg)
class CompilerSpecInsufficientlySpecificError(spack.error.SpackError):
def __init__(self, compiler_spec):
super(CompilerSpecInsufficientlySpecificError, self).__init__(
"Multiple compilers satisfy spec %s" % compiler_spec
)
super().__init__("Multiple compilers satisfy spec %s" % compiler_spec)

View File

@@ -132,7 +132,7 @@ def setup_custom_environment(self, pkg, env):
the 'DEVELOPER_DIR' environment variables to cause the xcrun and
related tools to use this Xcode.app.
"""
super(AppleClang, self).setup_custom_environment(pkg, env)
super().setup_custom_environment(pkg, env)
if not pkg.use_xcode:
# if we do it for all packages, we get into big troubles with MPI:

View File

@@ -12,7 +12,7 @@ class Cce(Compiler):
"""Cray compiler environment compiler."""
def __init__(self, *args, **kwargs):
super(Cce, self).__init__(*args, **kwargs)
super().__init__(*args, **kwargs)
# For old cray compilers on module based systems we replace
# ``version_argument`` with the old value. Cannot be a property
# as the new value is used in classmethods for path-based detection

View File

@@ -77,7 +77,7 @@ class Msvc(Compiler):
def __init__(self, *args, **kwargs):
new_pth = [pth if pth else get_valid_fortran_pth(args[0].version) for pth in args[3]]
args[3][:] = new_pth
super(Msvc, self).__init__(*args, **kwargs)
super().__init__(*args, **kwargs)
if os.getenv("ONEAPI_ROOT"):
# If this found, it sets all the vars
self.setvarsfile = os.path.join(os.getenv("ONEAPI_ROOT"), "setvars.bat")

View File

@@ -14,8 +14,6 @@
TODO: make this customizable and allow users to configure
concretization policies.
"""
from __future__ import print_function
import functools
import platform
import tempfile
@@ -50,7 +48,7 @@
@functools.total_ordering
class reverse_order(object):
class reverse_order:
"""Helper for creating key functions.
This is a wrapper that inverts the sense of the natural
@@ -67,7 +65,7 @@ def __lt__(self, other):
return other.value < self.value
class Concretizer(object):
class Concretizer:
"""You can subclass this class to override some of the default
concretization strategies, or you can override all of them.
"""
@@ -794,9 +792,7 @@ def __init__(self, arch, available_os_targets):
" operating systems and targets:\n\t" + "\n\t".join(available_os_target_strs)
)
super(NoCompilersForArchError, self).__init__(
err_msg, "Run 'spack compiler find' to add compilers."
)
super().__init__(err_msg, "Run 'spack compiler find' to add compilers.")
class UnavailableCompilerVersionError(spack.error.SpackError):
@@ -808,7 +804,7 @@ def __init__(self, compiler_spec, arch=None):
if arch:
err_msg += " for operating system {0} and target {1}.".format(arch.os, arch.target)
super(UnavailableCompilerVersionError, self).__init__(
super().__init__(
err_msg,
"Run 'spack compiler find' to add compilers or "
"'spack compilers' to see which compilers are already recognized"
@@ -821,7 +817,7 @@ class NoValidVersionError(spack.error.SpackError):
particular spec."""
def __init__(self, spec):
super(NoValidVersionError, self).__init__(
super().__init__(
"There are no valid versions for %s that match '%s'" % (spec.name, spec.versions)
)
@@ -832,7 +828,7 @@ class InsufficientArchitectureInfoError(spack.error.SpackError):
system"""
def __init__(self, spec, archs):
super(InsufficientArchitectureInfoError, self).__init__(
super().__init__(
"Cannot determine necessary architecture information for '%s': %s"
% (spec.name, str(archs))
)
@@ -848,4 +844,4 @@ def __init__(self, spec):
"The spec\n '%s'\n is configured as not buildable, "
"and no matching external installs were found"
)
super(NoBuildError, self).__init__(msg % spec)
super().__init__(msg % spec)

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